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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | gastrointestinal stromal tumor | | ISO | RGD:1317002 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27793025 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | gastrointestinal stromal tumor | | ISO | RGD:1317002 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:27793025 | |
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# | Reference Title | Reference Citation |
1. | Hedgehog signaling update. | Cohen MM, Am J Med Genet A. 2010 Aug;152A(8):1875-914. doi: 10.1002/ajmg.a.32909. |
2. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
3. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
4. | GOA pipeline | RGD automated data pipeline |
5. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
7. | Comprehensive gene review and curation | RGD comprehensive gene curation |
PMID:12372301 | PMID:12421714 | PMID:15755804 | PMID:20023168 | PMID:20799323 | PMID:30382378 |
Disp1 (Rattus norvegicus - Norway rat) |
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DISP1 (Homo sapiens - human) |
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Disp1 (Mus musculus - house mouse) |
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Disp1 (Chinchilla lanigera - long-tailed chinchilla) |
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DISP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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DISP1 (Canis lupus familiaris - dog) |
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Disp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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DISP1 (Sus scrofa - pig) |
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DISP1 (Chlorocebus sabaeus - green monkey) |
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Disp1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Disp1
512 total Variants ![]() |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
AI408383 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 2 | 2 | 2 | 23 | 20 | 31 | 11 | ||||||
Low | 3 | 43 | 55 | 39 | 19 | 39 | 8 | 11 | 51 | 15 | 10 | 8 | |
Below cutoff |
RefSeq Transcripts | NM_001105983 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001415783 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250381 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250383 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250384 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008769827 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017598735 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017598736 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017598737 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017598738 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039090573 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039090574 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039090575 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039090576 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039090577 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | CH473985 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JACYVU010000245 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000004834 ⟹ ENSRNOP00000004834 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001105983 ⟹ NP_001099453 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250381 ⟹ XP_006250443 | ||||||||||||||||
RefSeq Status: | |||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250383 ⟹ XP_006250445 | ||||||||||||||||
RefSeq Status: | |||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250384 ⟹ XP_006250446 | ||||||||||||||||
RefSeq Status: | |||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017598736 ⟹ XP_017454225 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039090573 ⟹ XP_038946501 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039090574 ⟹ XP_038946502 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039090575 ⟹ XP_038946503 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039090576 ⟹ XP_038946504 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_039090577 ⟹ XP_038946505 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001099453 | (Get FASTA) | NCBI Sequence Viewer |
NP_001402712 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250443 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250445 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250446 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017454225 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038946501 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038946502 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038946503 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038946504 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038946505 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL94885 | (Get FASTA) | NCBI Sequence Viewer |
EDL94886 | (Get FASTA) | NCBI Sequence Viewer | |
EDL94887 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001099453 ⟸ NM_001105983 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250443 ⟸ XM_006250381 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250446 ⟸ XM_006250384 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250445 ⟸ XM_006250383 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017454225 ⟸ XM_017598736 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000004834 ⟸ ENSRNOT00000004834 |
RefSeq Acc Id: | XP_038946501 ⟸ XM_039090573 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038946504 ⟸ XM_039090576 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038946503 ⟸ XM_039090575 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038946502 ⟸ XM_039090574 |
- Peptide Label: | isoform X2 |
- UniProtKB: | D3ZWU2 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038946505 ⟸ XM_039090577 |
- Peptide Label: | isoform X3 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-D3ZWU2-F1-model_v2 | AlphaFold | D3ZWU2 | 1-1522 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13699083 | ||||||||
Promoter ID: | EPDNEW_R9607 | ||||||||
Type: | initiation region | ||||||||
Name: | Disp1_1 | ||||||||
Description: | dispatched RND transporter family member 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1307675 | AgrOrtholog |
BioCyc Gene | G2FUF-17050 | BioCyc |
Ensembl Genes | ENSRNOG00000003635 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Protein | ENSRNOP00000004834 | ENTREZGENE |
ENSRNOP00000004834.4 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSRNOT00000004834 | ENTREZGENE |
ENSRNOT00000004834.5 | UniProtKB/TrEMBL | |
Gene3D-CATH | Multidrug efflux transporter AcrB transmembrane domain | UniProtKB/TrEMBL |
InterPro | Patched | UniProtKB/TrEMBL |
SSD_5TM | UniProtKB/TrEMBL | |
KEGG Report | rno:289338 | UniProtKB/TrEMBL |
NCBI Gene | 289338 | ENTREZGENE |
PANTHER | PROTEIN DISPATCHED HOMOLOG 1 | UniProtKB/TrEMBL |
PROTEIN DISPATCHED-RELATED | UniProtKB/TrEMBL | |
Pfam | Patched | UniProtKB/TrEMBL |
PhenoGen | Disp1 | PhenoGen |
PROSITE | SSD | UniProtKB/TrEMBL |
Superfamily-SCOP | Multidrug efflux transporter AcrB transmembrane domain | UniProtKB/TrEMBL |
UniProt | D3ZWU2 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2016-01-20 | Disp1 | dispatched RND transporter family member 1 | Disp1 | dispatched homolog 1 (Drosophila) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | Disp1 | dispatched homolog 1 (Drosophila) | Disp1_predicted | dispatched homolog 1 (Drosophila) (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Disp1_predicted | dispatched homolog 1 (Drosophila) (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |