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ONTOLOGY REPORT - ANNOTATIONS

Term:pattern specification process
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Accession:GO:0007389 term browser browse the term
Definition:Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Synonyms:related_synonym: pattern biosynthesis;   pattern formation


show annotations for term's descendants           Sort by:
pattern specification process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO MGI:108051 (MGI:3758991|PMID:17849440) RGD PMID:17849440 MGI:3758991 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Alx3 ALX homeobox 3 acts_upstream_of_or_within ISO MGI:108359 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 2:195,231,197...195,241,609
Ensembl chr 2:195,231,197...195,241,609 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:1277097 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:3521822 (MGI:3629263|PMID:16740478)
PMID:21873635		 RGD PMID:16740478 PMID:21873635 MGI:3629263, RGD:13792537 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:9,392,336...9,414,364
Ensembl chr 7:9,392,336...9,414,310 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (MGI:3579956|PMID:15930101) RGD PMID:15930101 MGI:3579956 NCBI chr 7:21,904,153...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Asph aspartate-beta-hydroxylase acts_upstream_of_or_within ISO MGI:2179287 (MGI:2177999|PMID:11773073) RGD PMID:11773073 MGI:2177999 NCBI chr 5:22,603,879...22,814,107
Ensembl chr 5:22,603,486...22,813,876 		JBrowse link
G Bmp5 bone morphogenetic protein 5 acts_upstream_of_or_within ISO MGI:1858106|MGI:1930367|MGI:2153906|MGI:2153907 (MGI:51561|PMID:1339316) RGD PMID:1339316 MGI:51561 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654 (MGI:77579|PMID:7590254) RGD PMID:7590254 MGI:77579 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158390|MGI:2176835 (MGI:3574741|PMID:15716346) RGD PMID:15716346 MGI:3574741 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Cdx1 caudal type homeo box 1 acts_upstream_of_or_within ISO MGI:2154514 (MGI:2178091|PMID:11959827) RGD PMID:11959827 MGI:2178091 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:1857928 (MGI:2178091|PMID:11959827) RGD PMID:11959827 MGI:2178091 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO MGI:2157350 (MGI:2389288|PMID:12397106) RGD PMID:12397106 MGI:2389288 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Cramp1 cramped chromatin regulator homolog 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,983,781...14,032,409
Ensembl chr10:13,983,866...14,032,392 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:98493 (MGI:3614586|PMID:16399080) RGD PMID:16399080 MGI:3614586 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within
involved_in		 ISO MGI:4867020 (MGI:5694502|PMID:26258302) RGD PMID:26258302 MGI:5694502 NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2448055|MGI:3052133 (MGI:3051703|PMID:15269168) RGD PMID:15269168 MGI:3051703 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within ISO MGI:102780|MGI:2150426 (MGI:3624596|PMID:16530750), (MGI:3702803|PMID:16916509) RGD PMID:16530750 PMID:16916509 MGI:3624596 MGI:3702803 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:95664 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Fst follistatin acts_upstream_of_or_within ISO MGI:1857467 (MGI:3513220|PMID:15525533) RGD PMID:15525533 MGI:3513220 NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857164|MGI:95729 (MGI:2683891|PMID:14602680), (MGI:77851|PMID:8575294) RGD PMID:8575294 PMID:14602680 MGI:2683891 MGI:77851 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:95728|MGI:98297 (MGI:2683891|PMID:14602680) RGD PMID:14602680 MGI:2683891 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 acts_upstream_of_or_within ISO MGI:2684328 (MGI:2682079|PMID:14608380) RGD PMID:14608380 MGI:2682079 NCBI chr 5:147,774,160...147,806,338
Ensembl chr 5:147,774,160...147,806,160 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:108067|MGI:2150162 (MGI:2153441|PMID:11731457), (MGI:2662646|PMID:12724834), (MGI:2675248|PMID:12930780), (MGI:3579956|PMID:15930101) RGD PMID:11731457 PMID:12724834 PMID:12930780 PMID:15930101 MGI:2153441 MGI:2662646 MGI:2675248 MGI:3579956 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1341884|MGI:2149672 (MGI:3794221|PMID:18302773) RGD PMID:18302773 MGI:3794221 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:104853|MGI:104876|MGI:2447620 (MGI:3794221|PMID:18302773) RGD PMID:18302773 MGI:3794221 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:1857530|MGI:1857626 (MGI:64469|PMID:7903601), (MGI:64470|PMID:7903600) RGD PMID:7903600 PMID:7903601 MGI:64469 MGI:64470 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxa5 homeo box A5 acts_upstream_of_or_within TAS
ISO		 MGI:2150397 (MGI:2177895|PMID:11900462) RGD PMID:11900462 PMID:7915120 MGI:2177895, RGD:728593 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96204|MGI:96205 (MGI:83869|PMID:8900279) RGD PMID:8900279 MGI:83869 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd12 homeo box D12 acts_upstream_of_or_within ISO MGI:96203|MGI:96205 (MGI:83869|PMID:8900279) RGD PMID:8900279 MGI:83869 NCBI chr 3:59,577,677...59,578,798
Ensembl chr 3:59,577,677...59,578,798 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857397|MGI:1857871|MGI:96203|MGI:96204 (MGI:2177382|PMID:11850178), (MGI:63627|PMID:8106170), (MGI:83869|PMID:8900279) RGD PMID:8106170 PMID:8900279 PMID:11850178 MGI:2177382 MGI:63627 MGI:83869 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857644 (MGI:1277795|PMID:9671585) RGD PMID:9671585 MGI:1277795 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1347476|MGI:1857848 (MGI:1344734|PMID:10498685), (MGI:3580024|PMID:15930111)		 UniProt
RGD		 PMID:10498685 PMID:15930111 GO_REF:0000024 MGI:1344734 MGI:3580024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 acts_upstream_of_or_within ISO (MGI:50741|PMID:1633717) RGD PMID:1633717 MGI:50741 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:95843 (MGI:2675248|PMID:12930780) RGD PMID:12930780 MGI:2675248 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (MGI:2389288|PMID:12397106) RGD PMID:12397106 MGI:2389288 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within ISO MGI:1889610 (MGI:1353819|PMID:10723730) RGD PMID:10723730 MGI:1353819 NCBI chr16:14,229,270...15,352,505
Ensembl chr16:14,235,157...15,352,368 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:1856222 (MGI:2177895|PMID:11900462) RGD PMID:11900462 MGI:2177895 NCBI chr 3:134,789,291...134,801,636
Ensembl chr 3:134,789,182...134,801,636 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (MGI:1095757|PMID:9262482) RGD PMID:9262482 MGI:1095757 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rax retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856862 (MGI:61293|PMID:13970082)		 Ensembl
RGD		 PMID:13970082 GO_REF:0000107 MGI:61293 NCBI chr18:59,463,737...59,467,431
Ensembl chr18:59,463,737...59,467,431 		JBrowse link
G Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:106,047,221...106,050,331
Ensembl chr10:106,047,221...106,050,345 		JBrowse link
G Rnf111 ring finger protein 111 acts_upstream_of_or_within ISO MGI:2680166 (MGI:1933509|PMID:11298452) RGD PMID:11298452 MGI:1933509 NCBI chr 8:71,103,967...71,180,172
Ensembl chr 8:71,103,973...71,145,070 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857796|MGI:95729 (MGI:2387225|PMID:12231626), (MGI:2683891|PMID:14602680)		 UniProt
RGD		 PMID:12231626 PMID:14602680 GO_REF:0000024 MGI:2387225 MGI:2683891 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO MGI:1889778 (MGI:1349488|PMID:10589677) RGD PMID:10589677 MGI:1349488 NCBI chr14:15,099,415...15,396,832
Ensembl chr14:15,099,423...15,396,915 		JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:109344|MGI:2655195 (MGI:3624596|PMID:16530750), (MGI:3702803|PMID:16916509) RGD PMID:16530750 PMID:16916509 MGI:3624596 MGI:3702803 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:87912 (MGI:3758991|PMID:17849440) RGD PMID:17849440 MGI:3758991 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:2176256 (MGI:3040160|PMID:15107405)
PMID:21873635		 RGD PMID:15107405 PMID:21873635 MGI:3040160, RGD:13792537 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of_or_within ISO MGI:3604658 (MGI:3603904|PMID:16179481) RGD PMID:16179481 MGI:3603904 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579 		JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 acts_upstream_of_or_within ISO MGI:3580631 (MGI:3614311|PMID:16452659) RGD PMID:16452659 MGI:3614311 NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104686|MGI:2179190 (MGI:3512717|PMID:15385444), (MGI:3530686|PMID:15652707), (MGI:3614586|PMID:16399080)		 UniProt
RGD		 PMID:15385444 PMID:15652707 PMID:16399080 GO_REF:0000024 MGI:3512717 MGI:3530686 MGI:3614586 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 PMID:21873635
GO_REF:0000107
MGI:2387851 (MGI:3051695|PMID:15289437)		 Ensembl
RGD		 PMID:15289437 PMID:21873635 GO_REF:0000107 MGI:3051695, RGD:13792537 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934269 (MGI:1335635|PMID:10227294) RGD PMID:10227294 MGI:1335635 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1859373|MGI:1928812 (MGI:1855901|PMID:10804169), (MGI:1855902|PMID:10804168)		 Ensembl
RGD		 PMID:10804168 PMID:10804169 GO_REF:0000107 MGI:1855901 MGI:1855902 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857799 (MGI:1195626|PMID:9389660)		 Ensembl
RGD		 PMID:9389660 GO_REF:0000107 MGI:1195626 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO (MGI:85935|PMID:9070329) RGD PMID:9070329 MGI:85935 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
G Zic3 Zic family member 3 acts_upstream_of_or_within ISO MGI:2180720 (MGI:2178095|PMID:11959836) RGD PMID:11959836 MGI:2178095 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3716756 (MGI:3714080|PMID:17317769)		 Ensembl
RGD		 PMID:17317769 GO_REF:0000107 MGI:3714080 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A acts_upstream_of_or_within ISO MGI:3836420 (MGI:5449118|PMID:22939930) RGD PMID:22939930 MGI:5449118 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104903 (MGI:1889107|PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cdx2 caudal type homeo box 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cdx4 caudal type homeo box 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:107405|MGI:98658 (MGI:3042338|PMID:15004567), (MGI:3776330|PMID:18241853) RGD PMID:15004567 PMID:18241853 MGI:3042338 MGI:3776330 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2148590 (MGI:1353237|PMID:10662781)
GO_REF:0000107		 RGD
Ensembl		 PMID:10662781 GO_REF:0000107 MGI:1353237 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO (MGI:4821075|PMID:16434966) RGD PMID:16434966 MGI:4821075 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88180 (MGI:1889107|PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:131,868,983...132,236,837
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:2449177 (MGI:2448170|PMID:12490556) RGD PMID:12490556 MGI:2448170 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Lefty1 left right determination factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3042338|PMID:15004567) RGD PMID:15004567 MGI:3042338 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Rnf2 ring finger protein 2 acts_upstream_of_or_within ISO MGI:2447529 (MGI:2389282|PMID:12183370) RGD PMID:12183370 MGI:2389282 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3794506|PMID:18321982) RGD PMID:18321982 MGI:3794506 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044914 (MGI:3044041|PMID:15155583) RGD PMID:15155583 MGI:3044041 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3776330|PMID:18241853) RGD PMID:18241853 MGI:3776330 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISS
ISO		 GO_REF:0000024
(MGI:4397730|PMID:19841259)		 UniProt
RGD		 PMID:19841259 GO_REF:0000024 MGI:4397730 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902 (MGI:3771246|PMID:18028899) RGD PMID:18028899 MGI:3771246 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3580390 (MGI:3580203|PMID:15870281) RGD PMID:15870281 MGI:3580203 NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 (PMID:9054360)
GO_REF:0000107		 RGD
Ensembl		 PMID:9054360 GO_REF:0000107 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) RGD PMID:28839193 MGI:6109647 NCBI chr16:2,606,807...2,669,902
Ensembl chr16:2,603,936...2,667,292 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9207801)		 UniProt
RGD		 PMID:9207801 GO_REF:0000024 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO MGI:3044616 (MGI:3043490|PMID:14668413) RGD PMID:14668413 MGI:3043490 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1934206 (MGI:1303194|PMID:9790191) RGD PMID:9790191 MGI:1303194 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835157|PMID:9054360) RGD PMID:9054360 MGI:4835157 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:87912 (MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118)		 Ensembl
RGD		 PMID:10452853 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3689276 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within		 ISO (PMID:9916847)
MGI:102806|MGI:1095407|MGI:1857709|MGI:98728 (MGI:1344152|PMID:10452853), (MGI:3525050|PMID:15542835), (MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489)		 RGD PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 More... MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003), (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568) RGD PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:108359 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621|MGI:1857484 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249) RGD PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chr 3:79,611,682...79,648,260
Ensembl chr 3:79,611,719...79,648,260 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein acts_upstream_of_or_within ISO MGI:2386454 (MGI:1355000|PMID:10727859) RGD PMID:10727859 MGI:1355000 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Barx1 BARX homeobox 1 acts_upstream_of_or_within ISO MGI:3578634 (MGI:3766872|PMID:17855428) RGD PMID:17855428 MGI:3766872 NCBI chr17:15,990,412...15,993,887
Ensembl chr17:15,990,412...15,993,887 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342 (MGI:3051920|PMID:15136140) RGD PMID:15136140 MGI:3051920 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO MGI:2158503|MGI:87912 (MGI:1855789|PMID:10772805), (MGI:3525050|PMID:15542835) RGD PMID:10772805 PMID:15542835 MGI:1855789 MGI:3525050 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO MGI:3823037|MGI:3841299 (MGI:3821803|PMID:18794365), (MGI:3840601|PMID:18974875) RGD PMID:18794365 PMID:18974875 MGI:3821803 MGI:3840601 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (MGI:3525050|PMID:15542835) RGD PMID:15542835 MGI:3525050 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Cdx1 caudal type homeo box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154514|MGI:97858 (MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967)		 Ensembl
RGD		 PMID:7585967 PMID:11784046 GO_REF:0000107 MGI:2154839 MGI:77274 NCBI chr18:54,472,448...54,499,799
Ensembl chr18:54,473,444...54,490,814 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:88362 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cdx4 caudal type homeo box 4 acts_upstream_of_or_within ISO MGI:88361 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337|MGI:4430218 (MGI:3835694|PMID:18849982), (MGI:4429791|PMID:19357712) RGD PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chr 7:116,987,616...117,125,035
Ensembl chr 7:116,987,605...117,125,164 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1197794|PMID:9501024) RGD PMID:9501024 MGI:1197794 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:97451 (MGI:2136711|PMID:11412024) RGD PMID:11412024 MGI:2136711 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:98493 (MGI:3614586|PMID:16399080) RGD PMID:16399080 MGI:3614586 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within ISO MGI:3045424 (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939 		JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO MGI:2183292|MGI:2679699 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 acts_upstream_of_or_within ISO MGI:1096359 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:97490 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2387775 (MGI:1934969|PMID:11358868) RGD PMID:11358868 MGI:1934969 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:4346364 (MGI:4367921|PMID:19877275) RGD PMID:19877275 MGI:4367921 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449672|MGI:5544775 (MGI:1339513|PMID:10391213), (MGI:5509072|PMID:23918385) RGD PMID:10391213 PMID:23918385 MGI:1339513 MGI:5509072 NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (MGI:5439039|PMID:22841643) RGD PMID:22841643 MGI:5439039 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:3798847|MGI:95728 (MGI:3053244|PMID:15315762), (MGI:5439039|PMID:22841643) RGD PMID:15315762 PMID:22841643 MGI:3053244 MGI:5439039 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362 		JBrowse link
G Helt helt bHLH transcription factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:45,991,227...45,993,045
Ensembl chr16:45,991,227...45,992,960 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes2 hes family bHLH transcription factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,667,190...162,668,235
Ensembl chr 5:162,667,190...162,668,235 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hes6 hes family bHLH transcription factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:92,001,838...92,003,580
Ensembl chr 9:92,001,841...92,003,559 		JBrowse link
G Hes7 hes family bHLH transcription factor 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:53,824,124...53,828,350
Ensembl chr10:53,825,574...53,828,097 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152 		JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (MGI:3777521|PMID:16936074) RGD PMID:16936074 MGI:3777521 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1314872 (MGI:3619785|PMID:16537918)		 Ensembl
RGD		 PMID:16537918 GO_REF:0000107 MGI:3619785 NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO MGI:1314872 (MGI:3619785|PMID:16537918) RGD PMID:16537918 MGI:3619785 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2176174|MGI:2670936 (MGI:3578600|PMID:15872003)
GO_REF:0000107		 RGD
Ensembl		 PMID:15872003 GO_REF:0000107 MGI:3578600 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069|MGI:96182 (MGI:1346308|PMID:10529420), (MGI:3055618|PMID:15367676) RGD PMID:10529420 PMID:15367676 MGI:1346308 MGI:3055618 NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:96192|MGI:96202 (MGI:2667742|PMID:12869760)
GO_REF:0000107		 RGD
Ensembl		 PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr 4:81,331,591...81,341,241
Ensembl chr 4:81,331,591...81,340,919 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96193|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857626 (MGI:1098901|PMID:9367425)
GO_REF:0000107		 RGD
Ensembl		 PMID:9367425 GO_REF:0000107 MGI:1098901 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:96184|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:67616|PMID:7913519)
PMID:21873635		 RGD PMID:7913519 PMID:9441667 PMID:21873635 MGI:1195045 MGI:67616, RGD:13792537 NCBI chr 4:81,269,243...81,313,218
Ensembl chr 4:81,269,243...81,313,218 		JBrowse link
G Hoxa4 homeo box A4 acts_upstream_of_or_within ISO MGI:2150391|MGI:96185|MGI:96208 (MGI:67413|PMID:7918106), (MGI:74948|PMID:7628700) RGD PMID:7628700 PMID:7918106 MGI:67413 MGI:74948 NCBI chr 4:81,289,677...81,291,685
Ensembl chr 4:81,289,682...81,291,685 		JBrowse link
G Hoxa5 homeo box A5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150397|MGI:3723623|MGI:96186|MGI:96196 (MGI:1203259|PMID:9603431), (MGI:3720535|PMID:17626057), (MGI:3723390|PMID:17417799), (MGI:63693|PMID:7901120)		 RGD PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 PMID:21873635 MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693, RGD:13792537 NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234 		JBrowse link
G Hoxa6 homeobox A6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150392|MGI:96187|MGI:96197 (MGI:3720535|PMID:17626057), (MGI:67413|PMID:7918106)		 RGD PMID:7918106 PMID:17626057 PMID:21873635 MGI:3720535 MGI:67413, RGD:13792537 NCBI chr 4:81,304,918...81,313,184
Ensembl chr 4:81,306,407...81,308,850 		JBrowse link
G Hoxa7 homeobox A7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:96188 (MGI:1313067|PMID:9784603)
GO_REF:0000107		 RGD
Ensembl		 PMID:9784603 GO_REF:0000107 MGI:1313067 NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659 		JBrowse link
G Hoxa9 homeobox A9 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797), (MGI:85243|PMID:9013929)		 RGD PMID:8625797 PMID:9013929 PMID:17626057 PMID:21873635 MGI:3720535 MGI:78984 MGI:85243, RGD:13792537 NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1346308|PMID:10529420), (MGI:1859107|PMID:10885747) RGD PMID:10529420 PMID:10885747 MGI:1346308 MGI:1859107 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:2151772|MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:85074|PMID:9012503) RGD PMID:9012503 PMID:10885747 MGI:1859107 MGI:85074 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192 		JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:1859107|PMID:10885747)
PMID:21873635		 RGD PMID:9441667 PMID:10885747 PMID:21873635 MGI:1195045 MGI:1859107, RGD:13792537 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107 		JBrowse link
G Hoxb4 homeo box B4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:74948|PMID:7628700), (MGI:85074|PMID:9012503)		 RGD PMID:7628700 PMID:9012503 PMID:10885747 PMID:21873635 MGI:1859107 MGI:74948 MGI:85074, RGD:13792537 NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128 		JBrowse link
G Hoxb5 homeo box B5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151484|MGI:96177|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96196 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)		 RGD PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580 		JBrowse link
G Hoxb6 homeo box B6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151485|MGI:96178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190|MGI:96197 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)		 RGD PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:81,258,726...81,267,458
Ensembl chr10:81,265,056...81,267,449 		JBrowse link
G Hoxb7 homeo box B7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (MGI:1313067|PMID:9784603), (MGI:1859107|PMID:10885747)		 RGD PMID:9784603 PMID:10885747 PMID:21873635 MGI:1313067 MGI:1859107, RGD:13792537 NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034 		JBrowse link
G Hoxb8 homeo box B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934178|MGI:2683089|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190|MGI:96198|MGI:96209 (MGI:1349283|PMID:10559485), (MGI:1859107|PMID:10885747), (MGI:1933164|PMID:11311170), (MGI:2681074|PMID:14623233)		 Ensembl
RGD		 PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 GO_REF:0000107 MGI:1349283 MGI:1859107 MGI:1933164 MGI:2681074 NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638 		JBrowse link
G Hoxb9 homeo box B9 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:85243|PMID:9013929)		 RGD PMID:9013929 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:85243, RGD:13792537 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818 		JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO MGI:96171|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:134,103,741...134,108,966
Ensembl chr 7:134,103,643...134,108,966 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:134,091,224...134,094,738
Ensembl chr 7:134,091,552...134,094,738 		JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO MGI:1926422 (MGI:1195385|PMID:9420327) RGD PMID:9420327 MGI:1195385 NCBI chr 7:134,058,640...134,065,479
Ensembl chr 7:134,058,640...134,064,800 		JBrowse link
G Hoxc4 homeo box C4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857570|MGI:2150683 (MGI:79121|PMID:8626021), (MGI:81673|PMID:8660891)
GO_REF:0000107		 RGD
Ensembl		 PMID:8626021 PMID:8660891 GO_REF:0000107 MGI:79121 MGI:81673 NCBI chr 7:134,135,279...134,173,133
Ensembl chr 7:134,170,591...134,173,133 		JBrowse link
G Hoxc5 homeo box C5 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:96177|MGI:96186 (MGI:3720535|PMID:17626057)
PMID:21873635		 RGD PMID:17626057 PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:134,150,988...134,154,410
Ensembl chr 7:134,150,988...134,154,410 		JBrowse link
G Hoxc6 homeo box C6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96178|MGI:96187 (MGI:3720535|PMID:17626057)		 RGD PMID:17626057 PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:134,138,017...134,148,899
Ensembl chr 7:134,135,502...134,148,392 		JBrowse link
G Hoxc8 homeobox C8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149030|MGI:96189|MGI:96209 (MGI:1933164|PMID:11311170)		 Ensembl
RGD		 PMID:11311170 GO_REF:0000107 MGI:1933164 NCBI chr 7:134,127,937...134,130,503
Ensembl chr 7:134,127,913...134,130,503 		JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:2150685|MGI:96180|MGI:96190|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:73980|PMID:7547473) RGD PMID:7547473 PMID:17626057 MGI:3720535 MGI:73980 NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96171|MGI:96192|MGI:96210 (MGI:1350864|PMID:10642795), (MGI:2667742|PMID:12869760) RGD PMID:10642795 PMID:12869760 MGI:1350864 MGI:2667742 NCBI chr 3:59,594,516...59,597,725
Ensembl chr 3:59,594,516...59,597,725 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172|MGI:96193 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857871 (MGI:63627|PMID:8106170) RGD PMID:8106170 MGI:63627 NCBI chr 3:59,570,647...59,573,963
Ensembl chr 3:59,570,646...59,573,963 		JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857959|MGI:96175|MGI:96184 (MGI:1195045|PMID:9441667), (MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)		 Ensembl
RGD		 PMID:7910549 PMID:7913519 PMID:9441667 GO_REF:0000107 MGI:1195045 MGI:63793 MGI:67616 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282 		JBrowse link
G Hoxd4 homeo box D4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151488|MGI:96176 (MGI:72992|PMID:7750651), (MGI:74948|PMID:7628700)		 RGD PMID:7628700 PMID:7750651 PMID:21873635 MGI:72992 MGI:74948, RGD:13792537 NCBI chr 3:59,614,464...59,634,042
Ensembl chr 3:59,614,464...59,631,528 		JBrowse link
G Hoxd8 homeobox D8 acts_upstream_of_or_within ISO MGI:2151815|MGI:96189|MGI:96198 (MGI:1933164|PMID:11311170) RGD PMID:11311170 MGI:1933164 NCBI chr 3:59,607,864...59,610,358
Ensembl chr 3:59,607,996...59,610,361 		JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:2150414|MGI:96180|MGI:96190|MGI:96199|MGI:96202 (MGI:1350864|PMID:10642795), (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797)
GO_REF:0000107		 RGD
Ensembl		 PMID:8625797 PMID:10642795 PMID:17626057 PMID:21873635 GO_REF:0000107 MGI:1350864 MGI:3720535 MGI:78984, RGD:13792537 NCBI chr 3:59,600,575...59,602,755
Ensembl chr 3:59,600,575...59,602,754 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (MGI:3609520|PMID:16109169) RGD PMID:16109169 MGI:3609520 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527|MGI:3027342 (MGI:2660994|PMID:12701101), (MGI:3579954|PMID:15930098) RGD PMID:12701101 PMID:15930098 MGI:2660994 MGI:3579954 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1861960 (MGI:1336552|PMID:10220415) RGD PMID:10220415 MGI:1336552 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:3625774|PMID:16618927) RGD PMID:15741318 PMID:16618927 MGI:3530206 MGI:3625774 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)		 UniProt
RGD		 PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1298218 (MGI:3045836|PMID:15142971)
PMID:21873635		 RGD PMID:15142971 PMID:21873635 MGI:3045836, RGD:13792537 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:1861309|MGI:2156191 (MGI:3045836|PMID:15142971), (MGI:3603992|PMID:16126904), (MGI:4413372|PMID:19795512) RGD PMID:15142971 PMID:16126904 PMID:19795512 MGI:3045836 MGI:3603992 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mllt3 MLLT3, super elongation complex subunit acts_upstream_of_or_within ISO MGI:2388982 (MGI:2387913|PMID:12242306) RGD PMID:12242306 MGI:2387913 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:72,961,170...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:2148229 (MGI:3613103|PMID:16368089) RGD PMID:16368089 MGI:3613103 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676|MGI:2158732|MGI:2180793|MGI:2656539|MGI:3056345 (MGI:2136068|PMID:11418863), (MGI:2155575|PMID:11311163), (MGI:3042338|PMID:15004567), (MGI:3056019|PMID:15302604), (MGI:3624254|PMID:16496285) RGD PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:3579117|MGI:3579118 (MGI:3578605|PMID:15829524) RGD PMID:15829524 MGI:3578605 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:97451 (MGI:3039992|PMID:15105370) RGD PMID:15105370 MGI:3039992 NCBI chr14:96,082,151...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:109448|MGI:1857502|MGI:2661067 (MGI:1197794|PMID:9501024), (MGI:2136711|PMID:11412024), (MGI:2656991|PMID:12652306) RGD PMID:9501024 PMID:11412024 PMID:12652306 MGI:1197794 MGI:2136711 MGI:2656991 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:95388 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (MGI:2151355|PMID:11566859) RGD PMID:11566859 MGI:2151355 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:1857633|MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:80640|PMID:8625838) RGD PMID:8625838 PMID:15741318 MGI:3530206 MGI:80640 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:18519639)
(MGI:3795695|PMID:18519639)		 RGD PMID:18519639 MGI:3795695 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:1931079|MGI:88360 (MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780) RGD PMID:8388780 PMID:11784046 MGI:2154839 MGI:60925 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within ISO MGI:1926913|MGI:99150 (MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538) RGD PMID:11060235 PMID:16624538 MGI:1926247 MGI:3628673 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620 		JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO MGI:3706668 (MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:3703453 NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO MGI:96995|MGI:99161 (MGI:3530206|PMID:15741318) RGD PMID:15741318 MGI:3530206 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1928592|PMID:11118883)
MGI:1934261|MGI:2387802 (MGI:2135419|PMID:11389830)		 RGD PMID:11118883 PMID:11389830 MGI:1928592 MGI:2135419 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857691|MGI:2668416 (MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863), (MGI:2667288|PMID:12842913)		 UniProt
RGD		 PMID:9529255 PMID:11418863 PMID:12842913 GO_REF:0000024 MGI:1201281 MGI:2136068 MGI:2667288 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO MGI:1857691|MGI:2656539|MGI:2668393 (MGI:3051711|PMID:15215210) RGD PMID:15215210 MGI:3051711 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176256|MGI:2450929 (MGI:5438143|PMID:22987639)		 Ensembl
RGD		 PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104686|MGI:2179191 (MGI:3039048|PMID:15084464), (MGI:3614586|PMID:16399080)		 UniProt
RGD		 PMID:15084464 PMID:16399080 GO_REF:0000024 MGI:3039048 MGI:3614586 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:3042261|MGI:3042262|MGI:3042264 (MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:3056222 NCBI chr 1:52,298,099...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:87912 (MGI:3695190|PMID:16845371) RGD PMID:16845371 MGI:3695190 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:3720547 NCBI chr18:77,376,399...77,452,315
Ensembl chr18:77,377,394...77,453,509 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3844764|PMID:19334287) RGD PMID:19334287 MGI:3844764 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:3835694|PMID:18849982) RGD PMID:18849982 MGI:3835694 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2178826 (MGI:1341483|PMID:10431240) RGD PMID:10431240 MGI:1341483 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) RGD PMID:15073149 PMID:19795512 MGI:3039991 MGI:4413372 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO MGI:1101770|MGI:2445451 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
G Zic3 Zic family member 3 acts_upstream_of_or_within ISO MGI:97359 (MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:3624254 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98956 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:4839483 NCBI chr  X:66,404,622...66,427,772
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1298218 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:3513254 (MGI:3715395|PMID:17531978) RGD PMID:17531978 MGI:3715395 NCBI chr 8:87,974,444...87,978,996
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Wnt6 Wnt family member 6 acts_upstream_of_or_within ISO (MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:2178881 NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523 		JBrowse link
BMP signaling pathway involved in heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO
ISS		 (PMID:19736317)
GO_REF:0000024		 RGD
UniProt		 PMID:19736317 GO_REF:0000024 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO
IEA
ISS		 (PMID:20702560)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20702560 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:19736317) RGD PMID:19736317 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
BMP signaling pathway involved in renal system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
BMP signaling pathway involved in spinal cord dorsal/ventral patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in IEA
ISO		 GO_REF:0000107
(PMID:11472837)		 Ensembl
RGD		 PMID:11472837 GO_REF:0000107 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (MGI:64171|PMID:7903221) RGD PMID:7903221 MGI:64171 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857626 (MGI:1098901|PMID:9367425)
GO_REF:0000107		 RGD
Ensembl		 PMID:9367425 GO_REF:0000107 MGI:1098901 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (MGI:67780|PMID:7925021) RGD PMID:7925021 MGI:67780 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
central nervous system segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zic2 Zic family member 2 involved_in ISO MGI:106676 (MGI:3714675|PMID:17490632) RGD PMID:17490632 MGI:3714675 NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106679 (MGI:3714675|PMID:17490632) RGD PMID:17490632 MGI:3714675 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:5566553|PMID:24531968)		 Ensembl
RGD		 PMID:24531968 GO_REF:0000107 MGI:5566553 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (MGI:5486528|PMID:23431145) RGD PMID:23431145 MGI:5486528 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO MGI:5527461 (MGI:5524255|PMID:23056351), (MGI:5605467|PMID:22923088) RGD PMID:22923088 PMID:23056351 MGI:5524255 MGI:5605467 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:95388 (MGI:3043493|PMID:15147765) RGD PMID:15147765 MGI:3043493 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387 (MGI:3043493|PMID:15147765), (MGI:3606726|PMID:12764040) RGD PMID:12764040 PMID:15147765 MGI:3043493 MGI:3606726 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within
involved_in		 ISO MGI:2176173|MGI:3802572 (MGI:5486528|PMID:23431145)
(MGI:6220563|PMID:30186101)		 RGD PMID:23431145 PMID:30186101 MGI:5486528 MGI:6220563 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO MGI:3521756 (MGI:3763674|PMID:17828260) RGD PMID:17828260 MGI:3763674 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:6220563|PMID:30186101)
MGI:1856155 (MGI:3606726|PMID:12764040), (MGI:5486528|PMID:23431145)		 Ensembl
RGD		 PMID:12764040 PMID:23431145 PMID:30186101 GO_REF:0000107 MGI:3606726 MGI:5486528 MGI:6220563 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Tra2b transformer 2 beta acts_upstream_of_or_within ISO MGI:2176173|MGI:4450919 (MGI:5584349|PMID:24586484) RGD PMID:24586484 MGI:5584349 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861919 (MGI:2181244|PMID:12001066)		 Ensembl
RGD		 PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857008 (MGI:2181244|PMID:12001066)		 Ensembl
RGD		 PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO MGI:1933734 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857877 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1860298 (MGI:3793375|PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
detection of nodal flow term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting involved_in ISO (MGI:4946570|PMID:21307093) RGD PMID:21307093 MGI:4946570 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (MGI:4946570|PMID:21307093) RGD PMID:21307093 MGI:4946570 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (MGI:6405644|PMID:31887266) RGD PMID:31887266 MGI:6405644 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
determination of bilateral symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (MGI:3575989|PMID:15731404) RGD PMID:15731404 MGI:3575989 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
determination of digestive tract left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944405)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:3722325 (MGI:3839019|PMID:18043505)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:18043505 GO_REF:0000024 GO_REF:0000107 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
determination of dorsal identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:9660951) RGD PMID:9660951 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:9660951) RGD PMID:9660951 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist involved_in ISO (MGI:5507937|PMID:23063586) RGD PMID:23063586 MGI:5507937 NCBI chr13:86,778,543...86,871,509
Ensembl chr13:86,778,500...86,871,615 		JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist involved_in ISO (MGI:1203284|PMID:9660951) RGD PMID:9660951 MGI:1203284 NCBI chr 5:151,318,752...151,329,948
Ensembl chr 5:151,318,754...151,338,719 		JBrowse link
determination of heart left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cer1 cerberus 1, DAN family BMP antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (MGI:3574743|PMID:15750185) RGD PMID:15750185 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 involved_in IBA
ISO		 PMID:21873635
(MGI:3055649|PMID:15466485)		 RGD PMID:15466485 PMID:21873635 MGI:3055649, RGD:13792537 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO (MGI:1927045|PMID:11076684) RGD PMID:11076684 MGI:1927045 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 acts_upstream_of_or_within ISO MGI:1857639 (MGI:1203269|PMID:9576835) RGD PMID:9576835 MGI:1203269 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:3722325 (MGI:3839019|PMID:18043505)
GO_REF:0000024
(PMID:23063620)		 Ensembl
RGD
UniProt		 PMID:18043505 PMID:23063620 GO_REF:0000024 GO_REF:0000107 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in ISO (MGI:5700258|PMID:26437028) RGD PMID:26437028 MGI:5700258 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5445347 (MGI:5607335|PMID:25192045) RGD PMID:25192045 MGI:5607335 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:1856184 (MGI:1328649|PMID:10349618) RGD PMID:10349618 MGI:1328649 NCBI chr 1:52,298,099...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
determination of intestine left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
determination of left/right asymmetry in lateral mesoderm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dand5 DAN domain BMP antagonist family member 5 involved_in ISO (MGI:3055649|PMID:15466485) RGD PMID:15466485 MGI:3055649 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO		 GO_REF:0000107
(MGI:5142377|PMID:11517919)		 Ensembl
RGD		 PMID:11517919 GO_REF:0000107 MGI:5142377 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5142377|PMID:11517919)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
determination of left/right asymmetry in nervous system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within ISO MGI:1856917 (MGI:3785303|PMID:18414654) RGD PMID:18414654 MGI:3785303 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (MGI:2178095|PMID:11959836) RGD PMID:11959836 MGI:2178095 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
determination of left/right symmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734 (MGI:3522525|PMID:15531373) RGD PMID:15531373 MGI:3522525 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO MGI:3512292 (MGI:3511374|PMID:15485907) RGD PMID:15485907 MGI:3511374 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:87912 (MGI:3689276|PMID:16991118)		 Ensembl
RGD		 PMID:16991118 GO_REF:0000107 MGI:3689276 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Acvr2b activin A receptor type 2B acts_upstream_of_or_within ISO MGI:102806|MGI:1857709 (MGI:3689276|PMID:16991118), (MGI:894948|PMID:9242489) RGD PMID:9242489 PMID:16991118 MGI:3689276 MGI:894948 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Alg5 ALG5, dolichyl-phosphate beta-glucosyltransferase acts_upstream_of_or_within ISO MGI:3578146 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr 2:138,936,998...138,951,228
Ensembl chr 2:138,936,993...138,951,216 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:5644076|PMID:25807483)		 Ensembl
RGD		 PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 5:61,309,183...61,350,596
Ensembl chr 5:61,309,183...61,350,596 		JBrowse link
G Ap1b1 adaptor related protein complex 1 subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:5644076|PMID:25807483)		 Ensembl
RGD		 PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr14:79,879,482...79,930,778
Ensembl chr14:79,879,533...79,930,778 		JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Bicc1 BicC family RNA binding protein 1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr20:17,449,644...17,686,775
Ensembl chr20:17,449,560...17,686,776 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO MGI:5708063 (MGI:5644076|PMID:25807483), (MGI:5696765|PMID:24947469) RGD PMID:24947469 PMID:25807483 MGI:5644076 MGI:5696765 NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within ISO MGI:5316786 (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722) RGD PMID:25807483 PMID:28289722 MGI:5644076 MGI:6161988 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 acts_upstream_of_or_within ISO MGI:97359 (MGI:5914406|PMID:28182636) RGD PMID:28182636 MGI:5914406 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (PMID:26531781) RGD PMID:26531781 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397), (MGI:5644076|PMID:25807483) RGD PMID:10521397 PMID:25807483 MGI:1346729 MGI:5644076 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3574743|PMID:15750185)		 UniProt
RGD		 PMID:15750185 GO_REF:0000024 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Daam2 dishevelled associated activator of morphogenesis 2 acts_upstream_of_or_within ISO MGI:4841108 (MGI:5543845|PMID:24091014) RGD PMID:24091014 MGI:5543845 NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497 		JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO MGI:3056132|MGI:97359 (MGI:3055649|PMID:15466485) RGD PMID:15466485 MGI:3055649 NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589 		JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 acts_upstream_of_or_within ISO MGI:5431501 (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722) RGD PMID:25807483 PMID:28289722 MGI:5644076 MGI:6161988 NCBI chr 9:84,435,552...84,472,632
Ensembl chr 9:84,435,552...84,472,635 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2429759|MGI:2448055 (MGI:2389012|PMID:12421714), (MGI:3577662|PMID:15755804) RGD PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:1861919 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dnaaf3 dynein, axonemal, assembly factor 3 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:69,291,300...69,299,365
Ensembl chr 1:69,291,454...69,299,344 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:5644076|PMID:25807483)
(MGI:5544549|PMID:23872636)
(PMID:23872636)		 UniProt
RGD		 PMID:23872636 PMID:25807483 GO_REF:0000024 MGI:5544549 MGI:5644076 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 involved_in
acts_upstream_of_or_within		 ISO (PMID:12142464), (PMID:18022865), (PMID:22184204), (PMID:22499950)
MGI:1856917|MGI:2152963|MGI:4821828 (MGI:1099344|PMID:9353118), (MGI:1347236|PMID:10556073), (MGI:5644076|PMID:25807483), (MGI:5811184|PMID:27340223)		 RGD PMID:9353118 PMID:10556073 PMID:12142464 PMID:18022865 PMID:22184204 More... MGI:1099344 MGI:1347236 MGI:48750 MGI:5644076 MGI:5811184 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in
acts_upstream_of_or_within		 ISO (PMID:11788826), (PMID:17515466), (PMID:22499950)
MGI:2180081|MGI:5285078 (MGI:2178772|PMID:11912187), (MGI:5644076|PMID:25807483), (MGI:6161988|PMID:28289722)		 RGD PMID:11788826 PMID:11912187 PMID:17515466 PMID:22499950 PMID:25807483 More... MGI:2178772 MGI:5644076 MGI:6161988 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890 		JBrowse link
G Dnai1 dynein, axonemal, intermediate chain 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:11231901), (PMID:17515466), (PMID:22499950)
(MGI:5644076|PMID:25807483)		 RGD PMID:11231901 PMID:17515466 PMID:22499950 PMID:25807483 MGI:5644076 NCBI chr 5:56,730,179...56,800,926
Ensembl chr 5:56,730,179...56,800,925 		JBrowse link
G Dnai2 dynein, axonemal, intermediate chain 2 involved_in ISO (PMID:18950741) RGD PMID:18950741 NCBI chr10:99,759,966...99,793,379
Ensembl chr10:99,759,966...99,793,378 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within ISO MGI:4262238 (MGI:5429171|PMID:21746835) RGD PMID:21746835 MGI:5429171 NCBI chr 1:244,408,710...244,426,891
Ensembl chr 1:244,408,785...244,426,888 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO MGI:3578144 (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:3610248|PMID:16229832), (MGI:5644076|PMID:25807483) RGD PMID:15755804 PMID:16061793 PMID:16229832 PMID:25807483 MGI:3577662 MGI:3588600 MGI:3610248 MGI:5644076 NCBI chr 8:4,189,257...4,412,183
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 acts_upstream_of_or_within ISO MGI:3505858 (MGI:3487175|PMID:15371312) RGD PMID:15371312 MGI:3487175 NCBI chr 6:9,992,537...10,025,403
Ensembl chr 6:9,992,541...10,025,336 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (MGI:3056270|PMID:15329346) RGD PMID:15329346 MGI:3056270 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:2135612 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2387775 (MGI:2652200|PMID:12642485) RGD PMID:12642485 MGI:2652200 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Foxj1 forkhead box J1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:5644076|PMID:25807483)
(PMID:31630787)		 UniProt
RGD		 PMID:25807483 PMID:31630787 GO_REF:0000024 MGI:5644076 NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:9,837,629...9,871,141
Ensembl chr 4:9,837,629...9,871,140 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO MGI:3870680 (MGI:5789455|PMID:27472056) RGD PMID:27472056 MGI:5789455 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305 		JBrowse link
G Ift140 intraflagellar transport 140 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within ISO MGI:2682066 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1859153|MGI:3027342 (MGI:1855904|PMID:10804177), (MGI:3577662|PMID:15755804) RGD PMID:10804177 PMID:15755804 MGI:1855904 MGI:3577662 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1861960|MGI:3580660 (MGI:1336552|PMID:10220415), (MGI:3577662|PMID:15755804) RGD PMID:10220415 PMID:15755804 MGI:1336552 MGI:3577662 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lefty1 left right determination factor 1 involved_in ISO (MGI:1277589|PMID:9708732) RGD PMID:9708732 MGI:1277589 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720 		JBrowse link
G LOC691354 hypothetical protein LOC691354 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:159,075,217...159,110,642
Ensembl chr 5:159,075,343...159,105,369 		JBrowse link
G Megf8 multiple EGF-like-domains 8 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4410614|MGI:4887578 (MGI:4367169|PMID:19776033), (MGI:4868517|PMID:21045211)		 Ensembl
RGD		 PMID:19776033 PMID:21045211 GO_REF:0000107 MGI:4367169 MGI:4868517 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in
acts_upstream_of_or_within		 ISO (PMID:26429889), (PMID:26437028)
(MGI:5644076|PMID:25807483)
(MGI:5700258|PMID:26437028)		 RGD PMID:25807483 PMID:26429889 PMID:26437028 MGI:5644076 MGI:5700258 NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855 		JBrowse link
G Nat8f5 N-acetyltransferase 8 (GCN5-related) family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:5644076|PMID:25807483)		 Ensembl
RGD		 PMID:25807483 GO_REF:0000107 MGI:5644076 NCBI chr 4:118,260,323...118,285,038
Ensembl chr 4:118,260,252...118,285,704 		JBrowse link
G Nek8 NIMA-related kinase 8 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr10:63,060,868...63,073,546
Ensembl chr10:63,061,253...63,072,416 		JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO MGI:1931319 (MGI:3056270|PMID:15329346) RGD PMID:15329346 MGI:3056270 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO MGI:4151115 (MGI:5429171|PMID:21746835) RGD PMID:21746835 MGI:5429171 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676|MGI:1344365|MGI:2158732|MGI:2180793|MGI:2388004|MGI:2443893 (MGI:2155575|PMID:11311163), (MGI:2387223|PMID:12231623), (MGI:2652200|PMID:12642485), (MGI:2654412|PMID:12654299), (MGI:3055649|PMID:15466485), (MGI:3624254|PMID:16496285), (MGI:5914406|PMID:28182636) RGD PMID:11311163 PMID:12231623 PMID:12642485 PMID:12654299 PMID:15466485 More... MGI:2155575 MGI:2387223 MGI:2652200 MGI:2654412 MGI:3055649 MGI:3624254 MGI:5914406 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230|MGI:1857877 (MGI:2661305|PMID:12730124), (MGI:72973|PMID:7789282) RGD PMID:7789282 PMID:12730124 MGI:2661305 MGI:72973 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:1933205 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (MGI:5014029|PMID:20350929), (MGI:5316531|PMID:22357932), (MGI:5646191|PMID:17884984) RGD PMID:17884984 PMID:20350929 PMID:22357932 MGI:5014029 MGI:5316531 MGI:5646191 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO
IBA		 (PMID:18371931)
PMID:21873635
(MGI:3807620|PMID:18371931)		 RGD PMID:18371931 PMID:21873635 MGI:3807620, RGD:13792537 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:23849778)
MGI:5311373 (MGI:5551687|PMID:23849778), (MGI:5644076|PMID:25807483)		 RGD PMID:23849778 PMID:25807483 MGI:5551687 MGI:5644076 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:25192045)
MGI:5548687 (MGI:5644076|PMID:25807483), (MGI:6360364|PMID:31383820)		 RGD PMID:25192045 PMID:25807483 PMID:31383820 MGI:5644076 MGI:6360364 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within ISO MGI:97359 (MGI:1858546|PMID:10809672) RGD PMID:10809672 MGI:1858546 NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596 		JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in		 ISO MGI:4133392 (MGI:6102515|PMID:27305836)
(MGI:6833916|PMID:34715025)		 RGD PMID:27305836 PMID:34715025 MGI:6102515 MGI:6833916 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
G Pierce2 piercer of microtubule wall 2 involved_in ISO (MGI:6833916|PMID:34715025) RGD PMID:34715025 MGI:6833916 NCBI chr 8:73,715,383...73,719,849
Ensembl chr 8:73,715,383...73,719,849 		JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:1277589|PMID:9708732)
MGI:1857844|MGI:1857846|MGI:1857880|MGI:2136268|MGI:2384494|MGI:2445428 (MGI:1344731|PMID:10498698), (MGI:1345532|PMID:10499586), (MGI:1347482|PMID:10572050), (MGI:2135655|PMID:11493526), (MGI:2389284|PMID:12397115), (MGI:5543845|PMID:24091014)		 RGD PMID:9708732 PMID:10498698 PMID:10499586 PMID:10572050 PMID:11493526 More... MGI:1277589 MGI:1344731 MGI:1345532 MGI:1347482 MGI:2135655 MGI:2389284 MGI:5543845 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr14:83,552,964...83,670,062
Ensembl chr14:83,545,469...83,638,498 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within ISO MGI:2676373 (MGI:2181535|PMID:12062060) RGD PMID:12062060 MGI:2181535 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Pskh1 protein serine kinase H1 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr19:33,794,919...33,827,040
Ensembl chr19:33,794,935...33,827,032 		JBrowse link
G Rfx3 regulatory factor X3 acts_upstream_of_or_within ISO MGI:3045792 (MGI:3041887|PMID:15121860) RGD PMID:15121860 MGI:3041887 NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:3513254 (MGI:3715395|PMID:17531978) RGD PMID:17531978 MGI:3715395 NCBI chr 8:87,974,444...87,978,996
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rttn rotatin acts_upstream_of_or_within ISO MGI:2674124 (MGI:2178890|PMID:11900971) RGD PMID:11900971 MGI:2178890 NCBI chr18:82,220,999...82,398,334
Ensembl chr18:82,221,050...82,398,333 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1339521|PMID:10385121), (MGI:1340887|PMID:10411502), (MGI:1346236|PMID:10500184) RGD PMID:10385121 PMID:10411502 PMID:10500184 MGI:1339521 MGI:1340887 MGI:1346236 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2137553|MGI:2176255 (MGI:2389012|PMID:12421714), (MGI:3577662|PMID:15755804) RGD PMID:12421714 PMID:15755804 MGI:2389012 MGI:3577662 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:1339521 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:3512046 (MGI:3604917|PMID:16155214) RGD PMID:16155214 MGI:3604917 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2179191 (MGI:3621085|PMID:16556915)		 UniProt
RGD		 PMID:16556915 GO_REF:0000024 MGI:3621085 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3652354 (MGI:3629366|PMID:16705179) RGD PMID:16705179 MGI:3629366 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802 		JBrowse link
G Tmem107 transmembrane protein 107 acts_upstream_of_or_within ISO MGI:5007367 (MGI:6405644|PMID:31887266) RGD PMID:31887266 MGI:6405644 NCBI chr10:53,772,153...53,774,685
Ensembl chr10:53,771,784...53,774,676 		JBrowse link
G Tmem67 transmembrane protein 67 acts_upstream_of_or_within ISO (MGI:5644076|PMID:25807483) RGD PMID:25807483 MGI:5644076 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:3611726|PMID:16291790) RGD PMID:16291790 MGI:3611726 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:5543845|PMID:24091014) RGD PMID:24091014 MGI:5543845 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zic3 Zic family member 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:9354794)
MGI:2180720|MGI:3043027|MGI:97359 (MGI:3056222|PMID:15384171), (MGI:3624254|PMID:16496285)		 RGD PMID:9354794 PMID:15384171 PMID:16496285 MGI:3056222 MGI:3624254 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944405)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
determination of pancreatic left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19944405)		 Ensembl
RGD		 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
determination of stomach left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) RGD PMID:18371931 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
determination of ventral identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aida axin interactor, dorsalization associated involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:94,940,311...94,967,920
Ensembl chr13:94,939,741...94,967,920 		JBrowse link
dorsal/ventral axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:1337175|PMID:10330403) RGD PMID:10330403 MGI:1337175 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2181295 (MGI:2670493|PMID:12923052) RGD PMID:12923052 MGI:2670493 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:2148594|MGI:2158470 (MGI:2670493|PMID:12923052)
GO_REF:0000107		 RGD
Ensembl		 PMID:12923052 GO_REF:0000107 MGI:2670493 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3823171|PMID:18985738) RGD PMID:18985738 MGI:3823171 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mdfi MyoD family inhibitor involved_in ISO (MGI:4441142|PMID:11238923) RGD PMID:11238923 MGI:4441142 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1934347 (MGI:1350715|PMID:10588713)		 Ensembl
RGD		 PMID:10588713 GO_REF:0000107 MGI:1350715 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Senp2 SUMO specific peptidase 2 IDA RGD PMID:10944533 RGD:1299408 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:9192640)		 Ensembl
RGD		 PMID:9192640 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2159246|MGI:2388160 (MGI:2157789|PMID:11830578), (MGI:2157790|PMID:11830579)		 Ensembl
RGD		 PMID:11830578 PMID:11830579 GO_REF:0000107 MGI:2157789 MGI:2157790 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3046395|PMID:15218525)		 Ensembl
RGD		 PMID:15218525 GO_REF:0000107 MGI:3046395 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:107689|MGI:3042750|MGI:3775614|MGI:95728 (MGI:3774974|PMID:18003640), (MGI:3806189|PMID:18590716) RGD PMID:18003640 PMID:18590716 MGI:3774974 MGI:3806189 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612 		JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1347476 (MGI:5486225|PMID:23383217)		 Ensembl
RGD		 PMID:23383217 GO_REF:0000107 MGI:5486225 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347472|MGI:95841 (MGI:3806189|PMID:18590716), (MGI:5486225|PMID:23383217), (MGI:894511|PMID:9226455) RGD PMID:9226455 PMID:18590716 PMID:23383217 MGI:3806189 MGI:5486225 MGI:894511 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070|MGI:98297 (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) RGD PMID:17504940 PMID:17504941 MGI:3710451 MGI:3710452 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674), (MGI:894564|PMID:9247260) RGD PMID:9247260 PMID:18590716 PMID:19286674 MGI:3806189 MGI:3841503 MGI:894564 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1347476 (MGI:894511|PMID:9226455) RGD PMID:9226455 MGI:894511 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within
involved_in		 ISO MGI:1341070|MGI:1861960|MGI:95728 (MGI:3806189|PMID:18590716), (MGI:3841503|PMID:19286674)
(MGI:4888042|PMID:21209331)		 RGD PMID:18590716 PMID:19286674 PMID:21209331 MGI:3806189 MGI:3841503 MGI:4888042 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) RGD PMID:18590716 MGI:3806189 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (MGI:3806189|PMID:18590716) RGD PMID:18590716 MGI:3806189 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:1347695 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (MGI:1347695|PMID:10557208) RGD PMID:10557208 MGI:1347695 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:1857447 (MGI:1095757|PMID:9262482) RGD PMID:9262482 MGI:1095757 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (MGI:69552|PMID:7720556) RGD PMID:7720556 MGI:69552 NCBI chr 9:35,943,522...35,967,367
Ensembl chr 9:35,944,085...35,966,927 		JBrowse link
G Rnf220 ring finger protein 220 acts_upstream_of_or_within ISO MGI:6393918 (MGI:6220747|PMID:30177510) RGD PMID:30177510 MGI:6220747 NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95655 (MGI:3710017|PMID:17442700), (MGI:3710451|PMID:17504941), (MGI:3806189|PMID:18590716)
(MGI:4888042|PMID:21209331)		 Ensembl
RGD		 PMID:17442700 PMID:17504941 PMID:18590716 PMID:21209331 GO_REF:0000107 MGI:3710017 MGI:3710451 MGI:3806189 MGI:4888042 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176255 (MGI:3806189|PMID:18590716)		 Ensembl
RGD		 PMID:18590716 GO_REF:0000107 MGI:3806189 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (MGI:3610767|PMID:16357211) RGD PMID:16357211 MGI:3610767 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (MGI:64780|PMID:8299937) RGD PMID:8299937 MGI:64780 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Acvr1 activin A receptor type 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI:1856035 (MGI:3797993|PMID:18316368) RGD PMID:18316368 MGI:3797993 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615 		JBrowse link
G Bmp1 bone morphogenetic protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,551,603...45,595,862
Ensembl chr15:45,551,603...45,595,776 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:107191 (MGI:3574003|PMID:15673568)
PMID:21873635		 RGD PMID:15673568 PMID:21873635 MGI:3574003, RGD:13792537 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:1338938 (MGI:3574003|PMID:15673568)
PMID:21873635		 RGD PMID:15673568 PMID:21873635 MGI:3574003, RGD:13792537 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368 		JBrowse link
G Chrd chordin acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:2157350 (MGI:2662951|PMID:12810603)
PMID:21873635		 RGD PMID:12810603 PMID:21873635 MGI:2662951, RGD:13792537 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:2176173 (MGI:3529734|PMID:15708565) RGD PMID:15708565 MGI:3529734 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2448055|MGI:98297 (MGI:3051703|PMID:15269168), (MGI:3577662|PMID:15755804) RGD PMID:15269168 PMID:15755804 MGI:3051703 MGI:3577662 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 acts_upstream_of_or_within ISO MGI:105373|MGI:3578144|MGI:95729|MGI:98297 (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:3610248|PMID:16229832), (MGI:5441704|PMID:21552265) RGD PMID:15755804 PMID:16061793 PMID:16229832 PMID:21552265 MGI:3577662 MGI:3588600 MGI:3610248 MGI:5441704 NCBI chr 8:4,189,257...4,412,183
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (MGI:3043904|PMID:15110048) RGD PMID:15110048 MGI:3043904 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (MGI:1194987|PMID:9362463), (MGI:81767|PMID:8684466) RGD PMID:8684466 PMID:9362463 MGI:1194987 MGI:81767 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Fbxl15 F-box and leucine-rich repeat protein 15 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:245,189,732...245,191,973
Ensembl chr 1:245,189,736...245,192,007 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 acts_upstream_of_or_within ISO MGI:3042750 (MGI:3039989|PMID:15105374) RGD PMID:15105374 MGI:3039989 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1857771|MGI:1932522 (MGI:2679162|PMID:14566948), (MGI:3581994|PMID:15893304) RGD PMID:14566948 PMID:15893304 MGI:2679162 MGI:3581994 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:3711070 (MGI:3710452|PMID:17504940) RGD PMID:17504940 MGI:3710452 NCBI chr17:4,482,014...4,485,155 JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (MGI:3617688|PMID:16342201) RGD PMID:16342201 MGI:3617688 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95727 (MGI:3617688|PMID:16342201) RGD PMID:16342201 MGI:3617688 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856275|MGI:1856276 (MGI:2445272|PMID:12435629), (MGI:3028732|PMID:14723851), (MGI:3624182|PMID:16571630) RGD PMID:12435629 PMID:14723851 PMID:16571630 MGI:2445272 MGI:3028732 MGI:3624182 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hhip Hedgehog-interacting protein acts_upstream_of_or_within ISO MGI:105373 (MGI:3511726|PMID:15576403) RGD PMID:15576403 MGI:3511726 NCBI chr19:27,863,684...27,952,528
Ensembl chr19:27,863,213...27,952,528 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857626|MGI:96183 (MGI:1335668|PMID:10230789)
GO_REF:0000107		 RGD
Ensembl		 PMID:10230789 GO_REF:0000107 MGI:1335668 Ensembl chr 4:81,262,768...81,265,044 JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (MGI:1335668|PMID:10230789) RGD PMID:10230789 MGI:1335668 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:2135652 NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO MGI:3578529|MGI:98297 (MGI:3577662|PMID:15755804), (MGI:5441704|PMID:21552265) RGD PMID:15755804 PMID:21552265 MGI:3577662 MGI:5441704 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:108075|MGI:2682066 (MGI:2679893|PMID:14603322), (MGI:3577662|PMID:15755804), (MGI:3588600|PMID:16061793), (MGI:5441704|PMID:21552265)
GO_REF:0000107		 RGD
Ensembl		 PMID:14603322 PMID:15755804 PMID:16061793 PMID:21552265 GO_REF:0000107 MGI:2679893 MGI:3577662 MGI:3588600 MGI:5441704 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3027342 (MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098) RGD PMID:15755804 PMID:15930098 MGI:3577662 MGI:3579954 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:3580660 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)		 UniProt
RGD		 PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890208 (MGI:1930361|PMID:11165475), (MGI:2679162|PMID:14566948)		 Ensembl
RGD		 PMID:11165475 PMID:14566948 GO_REF:0000107 MGI:1930361 MGI:2679162 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (MGI:3771226|PMID:18037398) RGD PMID:18037398 MGI:3771226 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in ISO (MGI:3687803|PMID:10767331) RGD PMID:10767331 MGI:3687803 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899 		JBrowse link
G Lrp4 LDL receptor related protein 4 acts_upstream_of_or_within ISO MGI:3621893|MGI:3707955 (MGI:3619629|PMID:16207730), (MGI:3703100|PMID:17119023) RGD PMID:16207730 PMID:17119023 MGI:3619629 MGI:3703100 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:7666191)		 Ensembl
RGD		 PMID:7666191 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:1857063 (MGI:64560|PMID:8155581) RGD PMID:8155581 MGI:64560 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:2661067 (MGI:2656991|PMID:12652306) RGD PMID:12652306 MGI:2656991 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3522498 (MGI:3618450|PMID:16423343) RGD PMID:16423343 MGI:3618450 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:2156741|MGI:3521718 (MGI:3512833|PMID:15548580), (MGI:3581509|PMID:15878992) RGD PMID:15548580 PMID:15878992 MGI:3512833 MGI:3581509 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842|MGI:3521736 (MGI:2389279|PMID:12183375), (MGI:3512715|PMID:15459176) RGD PMID:12183375 PMID:15459176 MGI:2389279 MGI:3512715 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1341847 (MGI:3511726|PMID:15576403)		 UniProt
RGD		 PMID:15576403 GO_REF:0000024 MGI:3511726 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1916147|MGI:1932386 (MGI:3051703|PMID:15269168), (MGI:5441704|PMID:21552265)		 UniProt
RGD		 PMID:15269168 PMID:21552265 GO_REF:0000024 MGI:3051703 MGI:5441704 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2137553|MGI:2176173|MGI:2176256 (MGI:3577662|PMID:15755804), (MGI:3624182|PMID:16571630) RGD PMID:15755804 PMID:16571630 MGI:3577662 MGI:3624182 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sp8 Sp8 transcription factor acts_upstream_of_or_within ISO MGI:2684137 (MGI:2679409|PMID:14597661) RGD PMID:14597661 MGI:2679409 NCBI chr 6:139,816,258...139,818,865
Ensembl chr 6:139,814,819...139,823,168
Ensembl chr 6:139,814,819...139,823,168 		JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3580099 (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 acts_upstream_of_or_within ISO MGI:3698004 (MGI:3697552|PMID:17082251) RGD PMID:17082251 MGI:3697552 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802 		JBrowse link
G Tll1 tolloid-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:25,509,146...25,710,330
Ensembl chr16:25,509,146...25,709,543 		JBrowse link
G Tll2 tolloid-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:239,916,017...240,027,916
Ensembl chr 1:239,915,508...240,028,120 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857704 (MGI:1194987|PMID:9362463), (MGI:71658|PMID:7885472) RGD PMID:7885472 PMID:9362463 MGI:1194987 MGI:71658 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
embryonic axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO (MGI:1928546|PMID:11118896) RGD PMID:11118896 MGI:1928546 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Chrdl1 chordin-like 1 involved_in ISO
IEA		 (MGI:1928546|PMID:11118896), (MGI:1934402|PMID:11401399)
GO_REF:0000107		 RGD
Ensembl		 PMID:11118896 PMID:11401399 GO_REF:0000107 MGI:1928546 MGI:1934402 NCBI chr  X:106,889,125...106,992,937
Ensembl chr  X:106,889,125...106,992,921 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in IDA PMID:15843474 UniProt PMID:15843474 RGD:8554075 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:76306|PMID:7586755) RGD PMID:7586755 MGI:76306 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:894149|PMID:9230313)
GO_REF:0000107		 RGD
Ensembl		 PMID:9230313 GO_REF:0000107 MGI:894149 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Frat1 FRAT regulator of WNT signaling pathway 1 acts_upstream_of_or_within ISO (MGI:1349209|PMID:10534617) RGD PMID:10534617 MGI:1349209 NCBI chr 1:240,638,288...240,640,857
Ensembl chr 1:240,638,296...240,640,945 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:12121999) RGD PMID:12121999 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (MGI:1339521|PMID:10385121) RGD PMID:10385121 MGI:1339521 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:4822553|PMID:2534596) RGD PMID:2534596 MGI:4822553 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:16826533) RGD PMID:16826533 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583785 (MGI:3611958|PMID:16314491)		 Ensembl
RGD		 PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2179442 (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2386265 (MGI:87488|PMID:9136932) RGD PMID:9136932 MGI:87488 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
embryonic heart tube left/right pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cimap3 ciliary microtubule associated protein 3 acts_upstream_of_or_within ISO MGI:4819764 (MGI:4819432|PMID:20643351) RGD PMID:20643351 MGI:4819432 NCBI chr 2:193,475,785...193,493,092
Ensembl chr 2:193,475,782...193,493,139 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (MGI:3054669|PMID:15475956) RGD PMID:15475956 MGI:3054669 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO MGI:1856915 (MGI:892786|PMID:9192865) RGD PMID:9192865 MGI:892786 NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350 		JBrowse link
G Megf8 multiple EGF-like-domains 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5551355|PMID:24052814)
GO_REF:0000107		 CAFA
RGD
Ensembl		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1927227 (MGI:892786|PMID:9192865)		 Ensembl
RGD		 PMID:9192865 GO_REF:0000107 MGI:892786 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Pitx2 paired-like homeodomain 2 involved_in ISO (MGI:3783941|PMID:17234970) RGD PMID:17234970 MGI:3783941 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
embryonic pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO (MGI:1332362|PMID:10049573) RGD PMID:10049573 MGI:1332362 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Disp1 dispatched RND transporter family member 1 acts_upstream_of_or_within ISO MGI:2672101 (MGI:2388245|PMID:12372301) RGD PMID:12372301 MGI:2388245 NCBI chr13:94,720,928...94,866,702
Ensembl chr13:94,720,928...94,866,702 		JBrowse link
G Dop1b DOP1 leucine zipper like protein B involved_in ISO (PMID:10950924) RGD PMID:10950924 NCBI chr11:33,024,376...33,125,931
Ensembl chr11:33,024,411...33,125,931 		JBrowse link
G Efnb1 ephrin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3039289 (MGI:3037600|PMID:15037550)		 Ensembl
RGD		 PMID:15037550 GO_REF:0000107 MGI:3037600 NCBI chr  X:64,257,351...64,270,158
Ensembl chr  X:64,257,351...64,270,157 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1352955|PMID:10655590)		 UniProt
RGD		 PMID:10655590 GO_REF:0000024 MGI:1352955 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1927833|MGI:3629660 (MGI:3714586|PMID:17522155), (MGI:3722952|PMID:16618415) RGD PMID:16618415 PMID:17522155 MGI:3714586 MGI:3722952 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:3722952|PMID:16618415) RGD PMID:16618415 MGI:3722952 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:4415718 (MGI:4413396|PMID:19653321) RGD PMID:19653321 MGI:4413396 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:102,742,905...102,944,833
Ensembl chr 3:102,742,900...102,949,696 		JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:76,861,267...76,872,691
Ensembl chr 1:76,861,924...76,872,691 		JBrowse link
G Nanog Nanog homeobox involved_in ISO (MGI:3042348|PMID:15108323) RGD PMID:15108323 MGI:3042348 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:1857063 (MGI:3587655|PMID:15550757) RGD PMID:15550757 MGI:3587655 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO (MGI:3775875|PMID:18191828) RGD PMID:18191828 MGI:3775875 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:103,436,731...103,440,904
Ensembl chr  X:103,436,729...103,443,349 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:87,974,444...87,978,996
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Ripply3 ripply transcriptional repressor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:33,648,471...33,656,587
Ensembl chr11:33,648,486...33,656,584 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768 (MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:3692344 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707 		JBrowse link
G Sim2 SIM bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2180881 (MGI:2180275|PMID:12024028) RGD PMID:12024028 MGI:2180275 NCBI chr11:33,414,218...33,453,663
Ensembl chr11:33,414,218...33,453,663 		JBrowse link
G Smad1 SMAD family member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad5 SMAD family member 5 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:3769332 (MGI:3768270|PMID:17984226) RGD PMID:17984226 MGI:3768270 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:2180720 (MGI:3617674|PMID:16397896) RGD PMID:16397896 MGI:3617674 NCBI chr  X:136,123,662...136,134,295
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:2677178 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
epithelial cilium movement involved in determination of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO
ISS		 (PMID:21131972)
GO_REF:0000024		 RGD
UniProt		 PMID:21131972 GO_REF:0000024 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in IBA
ISO		 PMID:21873635
(MGI:4936771|PMID:21131974)
(PMID:21131974)		 RGD PMID:21131974 PMID:21873635 MGI:4936771, RGD:13792537 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within ISO MGI:6509073 (MGI:6479264|PMID:33139725) RGD PMID:33139725 MGI:6479264 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 acts_upstream_of_or_within ISO MGI:6720857 (MGI:6503922|PMID:33347437) RGD PMID:33347437 MGI:6503922 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318 		JBrowse link
G Dnaaf11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within		 ISO (PMID:23122589)
MGI:6147714 (MGI:6147712|PMID:27353389)		 RGD PMID:23122589 PMID:27353389 MGI:6147712 NCBI chr 7:98,141,525...98,245,906
Ensembl chr 7:98,144,763...98,245,837 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 acts_upstream_of_or_within ISO MGI:1856917 (MGI:3629280|PMID:10549278), (MGI:5913669|PMID:22102620) RGD PMID:10549278 PMID:22102620 MGI:3629280 MGI:5913669 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536 		JBrowse link
G Invs inversin acts_upstream_of_or_within ISO MGI:1856915 (MGI:3629280|PMID:10549278) RGD PMID:10549278 MGI:3629280 NCBI chr 5:62,610,916...62,763,813
Ensembl chr 5:62,610,968...62,763,350 		JBrowse link
G Megf8 multiple EGF-like-domains 8 NOT|acts_upstream_of_or_within ISO MGI:3722325 (MGI:3839019|PMID:18043505) RGD PMID:18043505 MGI:3839019 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5548687 (MGI:6360364|PMID:31383820) RGD PMID:31383820 MGI:6360364 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:27486780)
MGI:6110171 (MGI:5913140|PMID:27486780)		 RGD PMID:27486780 MGI:5913140 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603 		JBrowse link
G Ofd1 Ofd1 centriole and centriolar satellite protein involved_in ISO (MGI:3617259|PMID:16311594) RGD PMID:16311594 MGI:3617259 NCBI chr  X:28,015,347...28,056,115
Ensembl chr  X:28,015,347...28,056,110 		JBrowse link
G Rfx3 regulatory factor X3 involved_in ISO (MGI:3041887|PMID:15121860) RGD PMID:15121860 MGI:3041887 NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402 		JBrowse link
establishment of anatomical structure orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttc8 tetratricopeptide repeat domain 8 involved_in ISO (PMID:14520415) RGD PMID:14520415 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
establishment of animal organ orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx4 iroquois homeobox 4 IEP RGD PMID:10882515 RGD:1582291 NCBI chr 1:30,030,561...30,039,549
Ensembl chr 1:30,030,561...30,039,549 		JBrowse link
G Wnt8a Wnt family member 8A acts_upstream_of_or_within ISO (MGI:3609071|PMID:16256739) RGD PMID:16256739 MGI:3609071 NCBI chr18:26,137,690...26,143,283
Ensembl chr18:26,137,690...26,143,283 		JBrowse link
establishment of left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 acts_upstream_of_or_within ISO MGI:5056368 (MGI:6111002|PMID:29317443) RGD PMID:29317443 MGI:6111002 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Cfap45 cilia and flagella associated protein 45 involved_in ISO (PMID:33139725) RGD PMID:33139725 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878 		JBrowse link
G Cfap52 cilia and flagella associated protein 52 involved_in ISO (PMID:33139725) RGD PMID:33139725 NCBI chr10:52,613,761...52,654,922
Ensembl chr10:52,613,762...52,654,934 		JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5526981|MGI:5532530 (MGI:5514194|PMID:23525783), (MGI:6358908|PMID:31107948)
GO_REF:0000107		 RGD
Ensembl		 PMID:23525783 PMID:31107948 GO_REF:0000107 MGI:5514194 MGI:6358908 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199 		JBrowse link
G Enkur enkurin, TRPC channel interacting protein involved_in
acts_upstream_of_or_within		 ISO (PMID:29257953)
MGI:6156078 (MGI:6110984|PMID:29257953)		 RGD PMID:29257953 MGI:6110984 NCBI chr17:83,690,105...83,714,756
Ensembl chr17:83,690,797...83,714,408 		JBrowse link
G Pierce1 piercer of microtubule wall 1 involved_in ISO (MGI:6102515|PMID:27305836) RGD PMID:27305836 MGI:6102515 NCBI chr 3:11,797,031...11,801,568
Ensembl chr 3:11,797,031...11,801,568 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(PMID:11923311)
MGI:1859647 (MGI:3629001|PMID:16720875)		 RGD PMID:11923311 PMID:16720875 PMID:21873635 MGI:3629001, RGD:13792537 NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153811 (MGI:3629001|PMID:16720875) RGD PMID:16720875 MGI:3629001 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:8582276)		 Ensembl
RGD		 PMID:8582276 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:1859823 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:1920441 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:2450901|MGI:98953 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:102764 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (MGI:3624179|PMID:16613831) RGD PMID:16613831 MGI:3624179 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:1352305|PMID:10625551) RGD PMID:10625551 MGI:1352305 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (MGI:1926244|PMID:11060228), (MGI:1928687|PMID:11124115), (MGI:3838261|PMID:18701439) RGD PMID:11060228 PMID:11124115 PMID:18701439 MGI:1926244 MGI:1928687 MGI:3838261 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857494 (MGI:1339462|PMID:10393115), (MGI:1928567|PMID:11163262), (MGI:2157787|PMID:11830575)		 Ensembl
RGD		 PMID:10393115 PMID:11163262 PMID:11830575 GO_REF:0000107 MGI:1339462 MGI:1928567 MGI:2157787 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1856158 (MGI:1913185|PMID:11050125), (MGI:1928687|PMID:11124115), (MGI:3838261|PMID:18701439), (MGI:5662366|PMID:24528677)		 Ensembl
RGD		 PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 GO_REF:0000107 MGI:1913185 MGI:1928687 MGI:3838261 MGI:5662366 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (PMID:18791198) RGD PMID:18791198 NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544 (MGI:4367927|PMID:19732765) RGD PMID:19732765 MGI:4367927 NCBI chr 3:50,861,367...50,935,782
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:3775846|MGI:3840448 (MGI:5662366|PMID:24528677) RGD PMID:24528677 MGI:5662366 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Wnt2b Wnt family member 2B involved_in ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)		 RGD PMID:15164427 MGI:4821941 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308 		JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)		 RGD PMID:15164427 MGI:4821941 NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1856158 (MGI:892757|PMID:9169845)		 Ensembl
RGD		 PMID:9169845 GO_REF:0000107 MGI:892757 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
growth plate cartilage axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stc1 stanniocalcin 1 involved_in ISO (PMID:16377640) RGD PMID:16377640 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264 		JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5907444|PMID:26295701) RGD PMID:26295701 MGI:5907444 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
heart looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Aplnr apelin receptor involved_in ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
G Arl13b ADP-ribosylation factor like GTPase 13B acts_upstream_of_or_within ISO MGI:3578151 (MGI:5430243|PMID:22554696) RGD PMID:22554696 MGI:5430243 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO (MGI:6717247|PMID:32179481) RGD PMID:32179481 MGI:6717247 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Ccdc103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) RGD PMID:22581229 NCBI chr10:87,846,327...87,849,959
Ensembl chr10:87,846,357...87,849,757 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in IBA
ISO		 PMID:21873635
(PMID:22693285)		 RGD PMID:22693285 PMID:21873635 RGD:13792537 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (MGI:3574743|PMID:15750185) RGD PMID:15750185 MGI:3574743 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cluap1 clusterin associated protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5523142 (MGI:5509110|PMID:23742838)
GO_REF:0000107		 RGD
Ensembl		 PMID:23742838 GO_REF:0000107 MGI:5509110 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO
IEA		 (MGI:2661305|PMID:12730124)
GO_REF:0000107		 RGD
Ensembl		 PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944400), (PMID:19944405)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944400 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO UniProtKB:Q60838 (MGI:5439040|PMID:22841628) RGD PMID:22841628 MGI:5439040 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in ISO UniProtKB:P51141 (MGI:5439040|PMID:22841628) RGD PMID:22841628 MGI:5439040 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Eng endoglin involved_in ISO (MGI:1337912|PMID:10348742), (MGI:4368063|PMID:19703439) RGD PMID:10348742 PMID:19703439 MGI:1337912 MGI:4368063 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (MGI:1340887|PMID:10411502) RGD PMID:10411502 MGI:1340887 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:3052615|PMID:15310850) RGD PMID:15310850 MGI:3052615 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (MGI:1201220|PMID:9486664) RGD PMID:9486664 MGI:1201220 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (MGI:1197800|PMID:9500551) RGD PMID:9500551 MGI:1197800 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857639 (MGI:892134|PMID:9171826)		 Ensembl
RGD		 PMID:9171826 GO_REF:0000107 MGI:892134 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179429 (MGI:3607736|PMID:14659802)		 Ensembl
RGD		 PMID:14659802 GO_REF:0000107 MGI:3607736 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Ift172 intraflagellar transport 172 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3829198 (MGI:3828200|PMID:18930042)
GO_REF:0000107		 RGD
Ensembl		 PMID:18930042 GO_REF:0000107 MGI:3828200 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift52 intraflagellar transport 52 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift57 intraflagellar transport 57 acts_upstream_of_or_within ISO MGI:3707373 (MGI:3703110|PMID:17027958) RGD PMID:17027958 MGI:3703110 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:5615026 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2181727 (MGI:1337724|PMID:10330409) RGD PMID:10330409 MGI:1337724 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lbx1 ladybird homeobox 1 acts_upstream_of_or_within ISO MGI:2386948 (MGI:3628723|PMID:12522123) RGD PMID:12522123 MGI:3628723 NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:3830899|PMID:16680724)		 UniProt
RGD		 PMID:16680724 GO_REF:0000024 MGI:3830899 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:1339460|PMID:10393122) RGD PMID:10393122 MGI:1339460 NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (MGI:3603078|PMID:16000382) RGD PMID:16000382 MGI:3603078 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689 		JBrowse link
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:166,345,853...166,471,715
NCBI chr 1:166,491,721...166,530,575
Ensembl chr 1:166,345,859...166,471,719 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1927227 (MGI:3773736|PMID:16510504), (MGI:74918|PMID:7628699), (MGI:892786|PMID:9192865)		 Ensembl
RGD		 PMID:7628699 PMID:9192865 PMID:16510504 GO_REF:0000107 MGI:3773736 MGI:74918 MGI:892786 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676 (MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:3624254 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO UniProtKB:O35516 (MGI:2661305|PMID:12730124) RGD PMID:12730124 MGI:2661305 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q01705 (MGI:2661305|PMID:12730124)		 Ensembl
RGD		 PMID:12730124 GO_REF:0000107 MGI:2661305 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (MGI:5646191|PMID:17884984) RGD PMID:17884984 MGI:5646191 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931), (PMID:20007846) RGD PMID:18371931 PMID:20007846 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (MGI:3776202|PMID:17573777) RGD PMID:17573777 MGI:3776202 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in