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Gene: Hoxc6 (homeo box C6) Rattus norvegicus
Symbol: Hoxc6
Name: homeo box C6
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification and embryonic skeletal system development. Predicted to localize to cytosol and nucleoplasm. Orthologous to human HOXC6 (homeobox C6); INTERACTS WITH amphetamine; bisphenol A; boric acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: homeobox protein Hox-C6
Homo sapiens (human) : HOXC6 (homeobox C6)  HGNC  Alliance
Mus musculus (house mouse) : Hoxc6 (homeobox C6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxc6 (homeobox C6)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXC6 (homeobox C6)
Canis lupus familiaris (dog) : HOXC6 (homeobox C6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxc6 (homeobox C6)
Sus scrofa (pig) : HOXC6 (homeobox C6)
Chlorocebus sabaeus (African green monkey) : HOXC6 (homeobox C6)
Heterocephalus glaber (naked mole-rat) : Hoxc6 (homeobox C6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.07144,612,230 - 144,626,036 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7144,623,555 - 144,625,516 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07142,406,437 - 142,417,393 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.17141,853,210 - 141,853,285 (+)NCBI
Celera7130,563,394 - 130,574,799 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Hoxc6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620626
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.