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Gene: Hoxc8 (homeobox C8) Rattus norvegicus
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Symbol: Hoxc8
Name: homeobox C8
Description: Predicted to have DNA binding activity. Predicted to be involved in several processes, including anterior/posterior pattern specification; negative regulation of transcription by RNA polymerase II; and skeletal system morphogenesis. Predicted to localize to the microtubule cytoskeleton and nucleoplasm. Orthologous to human HOXC8 (homeobox C8); INTERACTS WITH ammonium chloride; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); aldrin (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeo box C8; homeo box C8 (mapped); Homeobox gene C8; homeobox protein Hox-C8; homeobox protein R4; Hox3r4; Hoxc8_mapped
Orthologs:
Homo sapiens (human) : HOXC8 (homeobox C8)  HGNC  Alliance
Mus musculus (house mouse) : Hoxc8 (homeobox C8)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxc8 (homeobox C8)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXC8 (homeobox C8)
Canis lupus familiaris (dog) : LOC607625 (translation initiation factor IF-2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxc8 (homeobox C8)
Sus scrofa (pig) : HOXC8 (homeobox C8)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,605,072 - 144,607,639 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7144,605,058 - 144,608,538 (+)Ensembl
Rnor_5.07142,396,429 - 142,398,996 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera7130,553,925 - 130,556,402 (+)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
 
More on Hoxc8
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2821
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.