Gene: Chsy1 (chondroitin sulfate synthase 1) Rattus norvegicus
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Symbol: Chsy1
Name: chondroitin sulfate synthase 1
Description: ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); transferase activity, transferring glycosyl groups (ortholog); INVOLVED IN response to nutrient levels; bone morphogenesis (ortholog); cartilage development (ortholog); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN extracellular region (ortholog); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate
AGR Description: Predicted to have glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity; involved in response to nutrient levels; predicted to localize to the extracellular region; orthologous to human CHSY1 (chondroitin sulfate synthase 1).
Merged Description: Predicted to have glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity; involved in response to nutrient levels; predicted to localize to the extracellular region; orthologous to human CHSY1 (chondroitin sulfate synthase 1); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carbohydrate (chondroitin) synthase 1; LOC292999
Orthologs:
Homo sapiens (human) : CHSY1 (chondroitin sulfate synthase 1)  HGNC  Alliance
Mus musculus (house mouse) : Chsy1 (chondroitin sulfate synthase 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chsy1 (chondroitin sulfate synthase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHSY1 (chondroitin sulfate synthase 1)
Canis lupus familiaris (dog) : CHSY1 (chondroitin sulfate synthase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chsy1 (chondroitin sulfate synthase 1)
Sus scrofa (pig) : CHSY1 (chondroitin sulfate synthase 1)
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Allele / Splice: Chsy1Tn(sb-T2/Bart3)2.165Mcwi  
Genetic Models: F344-Chsy1Tn(sb-T2/Bart3)2.165Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01127,010,587 - 127,071,570 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01128,095,353 - 128,156,041 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41120,539,002 - 120,600,102 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11120,616,912 - 120,677,080 (+)NCBI
Celera1111,901,152 - 111,961,962 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
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QTLs in Region (Rnor_6.0)
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Sequence

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Strain Sequence Variants (Rnor 5.0)

Additional Information

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Nomenclature History
  
More on Chsy1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311904
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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