Bp93 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Bp93 (Blood pressure QTL 93) Rattus norvegicus

Symbol: Bp93
Name: Blood pressure QTL 93
RGD ID: 631569
Also known as: BPQTL1a
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 1.0E-4
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01113,593,576 - 129,209,407RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01114,600,888 - 130,268,180RGDRnor5.0
RGSC_v3.41106,445,165 - 122,992,360RGDRGSC3.4
RGSC_v3.11106,523,508 - 123,070,703RGD
Cross Type: intercross
Strains Crossed: SS.LEW-(D1Rat196-D1Mco36)/Jr 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

Related QTLs

Related QTL Description Reference
Bp30 interacts with RGD:2291850
Bp27 interacts with RGD:2291850


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2869Igf1rinsulin-like growth factor 1 receptor1128924921129213816Rat
628897Selenosselenoprotein S1126979579126989344Rat
2348Chrna7cholinergic receptor nicotinic alpha 7 subunit1123897341124039263Rat
620845Apba2amyloid beta precursor protein binding family A member 21125367273125547741Rat
727872Synmsynemin1128692112128722048Rat
1305154Asb7ankyrin repeat and SOCS box-containing 71127545671127599257Rat
1306361Ube3aubiquitin protein ligase E3A1116586901116678161Rat
1306051Nipa2NIPA magnesium transporter 21114346005114371907Rat
1308000Lrrk1leucine-rich repeat kinase 11127166866127301053Rat
1307209Lrrc28leucine rich repeat containing 281128486164128604190Rat
1304689Tubgcp5tubulin, gamma complex associated protein 51114186853114222516Rat
3246Pcsk6proprotein convertase subtilisin/kexin type 61126749508126947392Rat
1306305Tjp1tight junction protein 11126146489126515359Rat
1310526Ndnnecdin, MAGE family member1122981755122983354Rat
1310401Siglechsialic acid binding Ig-like lectin H1114046308114152716Rat
1311904Chsy1chondroitin sulfate synthase 11127010587127071570Rat
1310332Cyfip1cytoplasmic FMR1 interacting protein 11114258773114347138Rat
628662Aldh1a3aldehyde dehydrogenase 1 family, member A31127302920127337828Rat
1359360Mef2amyocyte enhancer factor 2a1128207715128341681Rat
1310409Ttc23tetratricopeptide repeat domain 231128604324128687900Rat
1309966Mceemethylmalonyl CoA epimerase1125229487125252692Rat
1307633Mphosph10M-phase phosphoprotein 101125212869125229060Rat
1311308Tars3threonyl-tRNA synthetase 31126523169126559493Rat
1309206Nsmce3NSE3 homolog, SMC5-SMC6 complex component1125663987125665314Rat
1305958Mtmr10myotubularin related protein 101125124743125175857Rat
1307989Herc2HECT and RLD domain containing E3 ubiquitin protein ligase 21114453033114653787Rat
1308792Lins1lines homolog 11127599647127625583Rat
1308783Adamts17ADAM metallopeptidase with thrombospondin type 1 motif, 171127802872128126764Rat
1305401Nipa1NIPA magnesium transporter 11114385484114422741Rat
1307664Peg12paternally expressed 121123097861123100464Rat
1308736Hmgn5bhigh mobility group nucleosome binding domain 5B1124477164124485737Rat
1306150Atp10aATPase phospholipid transporting 10A (putative)1115973343116141892Rat
1563721Otud7aOTU deubiquitinase 7A1124311873124655437Rat
1559691LOC308670Dnmt3a-ps2 pseudogene1114700504114711336Rat
1311197Mkrn3makorin, ring finger protein, 31123062049123064763Rat
1560408RGD1560408similar to Mannoside acetylglucosaminyltransferase 4, isoenzyme A1120228474120230671Rat
1564929Tm2d3TM2 domain containing 31126573474126595778Rat
1583954LOC691419similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP)1113941749113943078Rat
1566044Fpr3formyl peptide receptor 31116152526116161873Rat
1582811LOC691503similar to Ornithine decarboxylase (ODC)1116458566116460608Rat
1566323Fan1FANCD2 and FANCI associated nuclease 11125182117125209772Rat
1564356Cers3ceramide synthase 31127706618127781041Rat
1565099Klf13Kruppel-like factor 131124772596124803363Rat
1592985Fam189a1family with sequence similarity 189, member A11125552990125967984Rat
1592144Matr3-ps1matrin 3, pseudogene 11125877122125880833Rat
1583615Magel2MAGE family member L21123015404123019945Rat
1590620LOC680540similar to RIKEN cDNA 0610040D201126653440126654201Rat
1590913LOC298314similar to solute carrier family 25, member 51113735097113736271Rat
1595473LOC680151similar to ribosomal protein L361124395945124399989Rat
1596829LOC680059similar to non-POU domain containing, octamer-binding1123435671123437278Rat
1596870LOC680017similar to Zinc finger CCCH-type domain-containing protein 11A1123182404123185346Rat
1596803A26c2ANKRD26-like family C, member 21123578535123623066Rat
1592887Lysmd4LysM domain containing 41128199100128204989Rat
1598109LOC679961similar to mortality factor 4 like 11123110997123112074Rat
1591913LOC502342hypothetical LOC5023421123078592123080622Rat
1591914LOC502339hypothetical LOC5023391113743504113752539Rat
1597140Trpm1transient receptor potential cation channel, subfamily M, member 11124983391125101759Rat
1626035Vom2r-ps62vomeronasal 2 receptor, pseudogene 621123306419123334905Rat
2318263LOC100365824vomeronasal 2 receptor, 22-like1116869851116885665Rat
2318412Oca2OCA2 melanosomal transmembrane protein1114661970114987433Rat
2319686LOC100361687SET translocation-like1115349949115351050Rat
2320494Snrpa1small nuclear ribonucleoprotein polypeptide A'1126961389126974453Rat
4888565Mir344a-2microRNA 344a-21122309549122309655Rat
2325549Mir211microRNA 2111125042119125042224Rat
4888550Mir344b-1microRNA 344b-11121193138121193235Rat
6488322LOC100912195protein BEX1-like1116565779116567283Rat
6488065LOC100912263zinc finger and SCAN domain-containing protein 5B-like1116918664116919394Rat
6490831LOC100911748dynein light chain 1, cytoplasmic-like1114232487114233052Rat
6491275LOC100911716rho-related GTP-binding protein RhoQ-like1114174761114175320Rat
6503647LOC100909454RNA-binding protein 4B-like1120106285120106701Rat
7489017Mir344gmicroRNA 344g1122409917122409995Rat
7489023Mir344imicroRNA 344i1122506559122506657Rat
7508565LOC102548323uncharacterized LOC1025483231124232761124311601Rat
7511549LOC102555775uncharacterized LOC1025557751121211241121218330Rat
7513564LOC102552154uncharacterized LOC1025521541117314776117411271Rat
7497106LOC102551282uncharacterized LOC1025512821116732055116744648Rat
7661917LOC102552904uncharacterized LOC1025529041117869895117965505Rat
7612387LOC102549305uncharacterized LOC1025493051126695789126710127Rat
7631858LOC102547976F-box/WD repeat-containing protein 11-like1123604807123607397Rat
7663401LOC102551957uncharacterized LOC1025519571116976742116995432Rat
7648907LOC102547415uncharacterized LOC1025474151122854593122860305Rat
7665775LOC102546918uncharacterized LOC1025469181122605252122680118Rat
7634635LOC102555470uncharacterized LOC1025554701120858410120866977Rat
7634655LOC102553036uncharacterized LOC1025530361118011230118090847Rat
7650527LOC102555617uncharacterized LOC1025556171121010052121018201Rat
7654105LOC102554833uncharacterized LOC1025548331119445835119572958Rat
7577468LOC102549616uncharacterized LOC1025496161127147106127162833Rat
7625624LOC102548601uncharacterized LOC1025486011124868249124872767Rat
7641296LOC102555499uncharacterized LOC1025554991124622917124624718Rat
7658049LOC102553108uncharacterized LOC1025531081118090857118118259Rat
7608695LOC102546538uncharacterized LOC1025465381126515763126521681Rat
7610010LOC102552061uncharacterized LOC1025520611117130767117147185Rat
7660362LOC102551177uncharacterized LOC1025511771116750678116776982Rat
7569258LOC102549468uncharacterized LOC1025494681126731922126738624Rat
7556413LOC102550144heat shock cognate 71 kDa protein-like1127766372127768372Rat
7544339LOC102555866uncharacterized LOC1025558661121256980121294688Rat
7557666LOC102556257uncharacterized LOC1025562571121377924121395240Rat
7545313LOC102553398uncharacterized LOC1025533981118266794118275171Rat
7545650LOC102548067uncharacterized LOC1025480671123447308123623066Rat
7600346LOC102551346uncharacterized LOC1025513461116719403116723661Rat
7580217LOC102547060small nuclear ribonucleoprotein-associated protein B'-like1122370970122374405Rat
7554390LOC102547214uncharacterized LOC1025472141126667404126672053Rat
7691708LOC102553228uncharacterized LOC1025532281118134305118186050Rat
7676646LOC102548730uncharacterized LOC1025487301116702165116746469Rat
7685881LOC102555555uncharacterized LOC1025555551120891845120925989Rat
7689683LOC102555987uncharacterized LOC1025559871121393440121574030Rat
7683193LOC102549532uncharacterized LOC1025495321127090448127096163Rat
7736901LOC102549748uncharacterized LOC1025497481127469609127481814Rat
7715008LOC102556159uncharacterized LOC1025561591121380025121384048Rat
7716912LOC102549565thioredoxin-dependent peroxide reductase, mitochondrial-like1114323374114324846Rat
7697895LOC102546835uncharacterized LOC1025468351122757008122854408Rat
7719623LOC102552486uncharacterized LOC1025524861117546535117744629Rat
7721677LOC102546680uncharacterized LOC1025466801126483291126495345Rat
7749999LOC102556885uncharacterized LOC1025568851128826188128829304Rat
7750416LOC102554921alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A-like1119992710119994907Rat
7728972LOC102548165uncharacterized LOC1025481651124232696124242700Rat
9088822LOC103691124uncharacterized LOC1036911241116679619116683039Rat
9092840LOC103691158uncharacterized LOC1036911581128491553128495119Rat
9136205LOC103691157uncharacterized LOC1036911571128397969128419654Rat
9139477LOC103691144uncharacterized LOC1036911441119271678119295681Rat
9071245LOC103691147uncharacterized LOC1036911471121320140121327139Rat
9183358LOC103691141uncharacterized LOC1036911411118643922118654971Rat
9148577LOC103691143uncharacterized LOC1036911431119006359119054836Rat
9188755LOC103690135uncharacterized LOC1036901351123158637123160614Rat
9112009LOC103691126uncharacterized LOC1036911261116765872116780648Rat
9198344LOC103691146uncharacterized LOC1036911461120919146120955987Rat
9122388LOC103691150uncharacterized LOC1036911501122493912122504188Rat
9356319LOC103691125uncharacterized LOC1036911251116677134116680678Rat
9322734LOC103691159uncharacterized LOC1036911591128671609128672641Rat
9373252LOC103691122DNA polymerase epsilon subunit 3 pseudogene1114898357114899250Rat
9242284LOC103691156uncharacterized LOC1036911561128267546128270594Rat
9327265LOC103691148uncharacterized LOC1036911481121575718121580118Rat
9333865LOC103691153molybdate-anion transporter-like1124588080124591416Rat
9251676LOC103691154sorting nexin-4 pseudogene1125987724125988651Rat
9339375LOC103691127uncharacterized LOC1036911271116744781116746485Rat
9261187LOC103691138uncharacterized LOC1036911381117218800117238594Rat
9400911LOC103691140uncharacterized LOC1036911401118504683118672820Rat
9441252LOC103691155uncharacterized LOC1036911551126385293126515732Rat
9444068LOC103691137uncharacterized LOC1036911371116986635116992873Rat
9444709LOC103691149uncharacterized LOC1036911491121571927121580621Rat
9411500LOC103690151uncharacterized LOC1036901511118131075118133759Rat
9451628LOC103691151uncharacterized LOC1036911511122688166122689344Rat
9453405LOC103691139uncharacterized LOC1036911391117720513117726605Rat
9456169LOC103691123transmembrane protease serine 11B-like protein1115834233115835666Rat
9457055LOC103691152uncharacterized LOC1036911521123149712123152369Rat
9418201LOC103691142uncharacterized LOC1036911421119138933119172552Rat
11360285LOC108349006uncharacterized LOC1083490061125348944125360417Rat
11461438LOC108349580lysophospholipase-like protein 1 pseudogene1116153755116158713Rat
11463533LOC108349586uncharacterized LOC1083495861126605777126610808Rat
11465019LOC108349000uncharacterized LOC1083490001127171304127174386Rat
11468142LOC10834900560S ribosomal protein L7a pseudogene1124603592124604459Rat
11471669LOC108348727uncharacterized LOC1083487271114372062114410648Rat
11471710LOC108349001uncharacterized LOC1083490011127163481127166481Rat
11360778LOC108349578uncharacterized LOC1083495781114427784114452479Rat
11448029LOC108349581ornithine decarboxylase pseudogene1116458559116462490Rat
11451255LOC108349637uncharacterized LOC1083496371118706293118711663Rat
11452634LOC108349588uncharacterized LOC1083495881127007381127010076Rat
11460325LOC10834958740S ribosomal protein S29 pseudogene1126771399126775384Rat
11432987LOC108349234uncharacterized LOC1083492341128610125128630905Rat
11453886LOC108349585uncharacterized LOC1083495851124828939124836400Rat
11416078LOC10834977140S ribosomal protein S27-like1128749220128774118Rat
11422064LOC108349811uncharacterized LOC1083498111117798142117799990Rat
11422984LOC10834976860S ribosomal protein L29-like1115229916115230212Rat
11424257LOC108349722sialic acid-binding Ig-like lectin 91114145311114145870Rat
11384511LOC108349770glyceraldehyde-3-phosphate dehydrogenase pseudogene1128366697128367630Rat
11409293LOC108348964uncharacterized LOC1083489641113671015113673425Rat
11409432LOC108349813uncharacterized LOC1083498131117573581117591148Rat
11409661LOC10834846760S ribosomal protein L7a pseudogene1120498544120499426Rat
11401546LOC108349809uncharacterized LOC1083498091118192303118197416Rat
11380296LOC108349769probable threonine--tRNA ligase 2, cytoplasmic1126575368126583979Rat
11382284LOC108349280Ig kappa chain V-V region L6-like1118786632118787118Rat
11393548LOC10834888060S ribosomal protein L34 pseudogene1113893832113894193Rat
11519974Trnae-uuc1transfer RNA glutamic acid (anticodon UUC) 11115716360115716431Rat
11476619LOC108349584uncharacterized LOC1083495841123101238123126302Rat
11503981LOC108349583uncharacterized LOC1083495831121760618121847222Rat
11480989LOC108349812uncharacterized LOC1083498121117495842117544376Rat
11495780LOC108349459igE-binding protein-like1120912179120913299Rat
11508045LOC108349441uncharacterized LOC1083494411121160464121183669Rat
11508989LOC108349582uncharacterized LOC1083495821121578774121580313Rat
11498052LOC108349810uncharacterized LOC1083498101119470308119487169Rat
11487572LOC108349579uncharacterized LOC1083495791115461002115507379Rat
11489695LOC108349848thymosin beta-10 pseudogene1128872430128872615Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34134D1Mgh11421126240518126240667Ratregion
34134D1Mgh11421124090312124090461Ratregion
34381D1Mgh71451113593576113593716Ratregion
35234D6Rat451471125443003125443143Ratregion
35268D1Rat341701121035537121035707Ratregion
36982D1Rat311741114739351114739530Ratregion
36464D1Rat1041521116056451116056602Ratregion
35166D1Rat331601122614824122614963Ratregion
39428D1Rat3202031125875758125875986Ratregion
42272D1Rat4901831113675322113675508Ratregion
42484D1Rat3441541122507339122507496Ratregion
41694D1Rat3812091121241973121242176Ratregion
41898D1Rat4672441120826520120826755Ratregion
60236D1Got2701931116026384116026576Ratregion
60240D1Got2781361122614830122614966Ratregion
625800D1Got2772411120773072120773309Ratregion
629599D1Hmgc51271128924376128924502Ratregion
66611D1Mco364671129208943129209407Ratregion
66612D1Mco373761121343912121344287Ratregion
66613D1Mco381851116680361116680557Ratregion
66621D1Mco441611124509796124509960Ratregion
67291D1Arb111751128681076128681250Ratregion
67757D1Uwm21861128848244128848429Ratregion
1631769D1Got3732351116143131116143360Ratregion
1631881D1Got3162121124033325124033536Ratregion
1626846D1Mco561971128475231128475427Ratregion
1627057D1Mco582361128845396128845631Ratregion
1627118D1Mco701961127219581127219776Ratregion
1627241D1Mco711731127426525127426697Ratregion
1627420D1Mco572021127984703127984904Ratregion
1628737D1Got3592971124878541124878837Ratregion
1628760D1Got4011491128658472128658620Ratregion
1633408D1Got3171701128793575128793744Ratregion
1636573D1Got3132201122922516122922735Ratregion
1638199D1Got3152141123742366123742579Ratregion
1638425D1Got4232971125430192125430488Ratregion
7206400CH04h028531114960553114961405Ratregion
7192245IGF1R1811129162783129162963Ratregion
7192350Igf1r3931128978121128978513Ratregion
7193064TJP11011126146648126146748Ratregion
5038664AF0615291471114653288114653434Ratregion
5038758RH1273161871125213040125213587Ratregion
7206522UniSTS:5468628941120228785120229678Ratregion
7206522UniSTS:5468628941119993021119993914Ratregion
7206664Magel22931123018673123018965Ratregion
7206668Mkrn35091123063632123064140Ratregion
7206670Ndn3791122982068122982446Ratregion
7206672Ndn12721122982068122983339Ratregion
7206802RH1268642361116565791116566026Ratregion
5036913AU0496041831126744911126745093Ratregion
7206118UniSTS:5321476021123062808123063409Ratregion
5031982AU0464781421128757929128758070Ratregion
5034654BF3907751501128222938128223087Ratregion
5032217AI528698921122983147122983238Ratregion
5035316BQ2061642011125730459125730659Ratregion
5027645AW5567971331124589813124589940Ratregion
5027739ZNF139701117217312117217381Ratregion
5027745TJP11651126146545126146709Ratregion
5030347AW5330271631114381961114382123Ratregion
5030383BF3970232501122972513122972763Ratregion
5033181RH1378821681128692326128692493Ratregion
5027989D500601851126946146126946330Ratregion
5030609BF4102731691125071071125071239Ratregion
5055177RH1436501201128209024128209143Ratregion
5056507RH1444181001125502208125502307Ratregion
5057147D1Bda2301129206658129207016Ratregion
5054099RH1430302481125099942125100189Ratregion
5057145D1Bda223531123900674123901026Ratregion
5054623RH1433302671127625174127625440Ratregion
5059468BI2910561151128829445128829559Ratregion
5057596BE1010791501128203676128203825Ratregion
5055547RH1438641211125226681125226801Ratregion
5057872BE1016071931114430246114430438Ratregion
5058604BE1021811621124461700124461861Ratregion
5055185RH1436551111128722199128722309Ratregion
5056953RH1446761511115159145115159295Ratregion
5052745RH1422481681125175532125175699Ratregion
5055695RH1439491301128985452128985581Ratregion
5053169RH1424931011128046375128046475Ratregion
5057702BF3860311501128419418128419567Ratregion
5052402D7Mit231701127443311127443380Ratregion
5051216RH1345062081116565827116566034Ratregion
5050788RH1342581831125101568125101750Ratregion
5040720RH1284452051128204563128204767Ratregion
5041312RH1287851831123096929123097111Ratregion
5046498RH1317881801125104210125104389Ratregion
5046780RH1319501811114995450114995630Ratregion
5048232RH1327842121121010317121010528Ratregion
5039972RH1280152131114348001114348213Ratregion
5041938RH1291452031126947189126947391Ratregion
5043288RH12994001123097890123098099Ratregion
5043514RH1300692071116171288116171494Ratregion
5075072RH1383821351125108480125108614Ratregion
5073948RH1377311571125180414125180570Ratregion
5072476RH1368711521127301370127301521Ratregion
5074980RH1383291581121354965121355122Ratregion
5075990RH1389142441114653412114653655Ratregion
5073746RH1376141681116586070116586237Ratregion
5073066RH1372162021114222275114222476Ratregion
5071686RH1352261931129053503129053695Ratregion
5061836AW5272431531124768668124768820Ratregion
5066644AU0482352011114563056114563254Ratregion
5066948AU0480551131120475490120475602Ratregion
5068152AU0473172141120130878120131091Ratregion
5068806AU046918991125568266125568364Ratregion
5069756AU0290662571125285624125285880Ratregion
5060216BI2797911571125047286125047442Ratregion
5064438BF3992111811114223851114224031Ratregion
5063936BE1202791511115155488115155638Ratregion
5065556BE1158681551127150719127150873Ratregion
5061178BE1111301601127072871127073030Ratregion
5061238BE1113641511128992243128992393Ratregion
5063150BI3013721621115996612115996773Ratregion
5084166AI2340921671114202429114202595Ratregion
5086343BM3849252021129043490129043691Ratregion
5087233BQ1952021851127780698127780882Ratregion
5083155BF3908901521124323413124323564Ratregion
5088225AU0484411631128216130128216288Ratregion
5089529AU0492092811115570771115571051Ratregion
5089541AU0492161451127111161127111305Ratregion
5084734AI007682941114987677114987770Ratregion
5087167BQ2084221731125691485125691657Ratregion
5087167BQ2084221731125686429125686601Ratregion
5087956Igf1r1301129142678129142807Ratregion
5088007Mlsn11301125057074125057203Ratregion
5082259BE1190571561128960536128960691Ratregion
5080906RH1418511871114348707114348893Ratregion
5085248AI5984962071127070711127070917Ratregion
5085519AI5989641521114348319114348470Ratregion
5086050AW5294242121126347012126347223Ratregion
5081028RH1419231821128671640128671821Ratregion
5083257BI2758531601126944801126944960Ratregion
5086502BQ2049191671129208804129208970Ratregion
5085876AA8488091841127301512127301695Ratregion
5503150TAMU_PKR00011811129162783129162963Ratregion
5504594PMC311424P101114625392114626301Ratregion
5504236RH366755701126802139126802708Ratregion
5504534PMC283541P12851127317713127317997Ratregion
5504801Ube3a2671116674178116675454Ratregion
5504803Ube3a9251116658015116658939Ratregion
5506489AF0073754161127726065127726480Ratregion
5506489AF0073754161127722112127722527Ratregion
5500214AI326008811125213516125213596Ratregion
5500320GDB:1873661021128924422128924523Ratregion
5503093Am103b11291127108442127109570Ratregion
5504712PMC64493P25031125664042125664544Ratregion
5501668Mef2a1341128242704128242837Ratregion
5505572UniSTS:48315601114174716114175376Ratregion
5502076MARC_27533-27534:1035232725:14991128207847128208345Ratregion
5502901Ndn9471122982150122983096Ratregion
Position Markers

Flank 1: (D1Mgh7)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01113,593,576 - 113,593,716NCBI
Rnor_5.01114,600,888 - 114,601,028UniSTS
RGSC_v3.41106,445,165 - 106,445,306RGD
RGSC_v3.41106,445,166 - 106,445,306UniSTS
RGSC_v3.11106,523,508 - 106,523,649RGD
Celera1100,289,873 - 100,290,013UniSTS
Cytogenetic Map1 RGD
RH 3.4 Map1940.7RGD
RH 3.4 Map1940.7UniSTS
SHRSP x BN Map153.8299RGD
SHRSP x BN Map153.8299UniSTS
FHH x ACI Map153.4RGD
Flank 2: (D1Mco36)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01129,208,943 - 129,209,407NCBI
Rnor_5.01130,267,716 - 130,268,180UniSTS
RGSC_v3.41122,991,896 - 122,992,360UniSTS
RGSC_v3.41122,991,895 - 122,992,360RGD
RGSC_v3.11123,070,238 - 123,070,703RGD
Celera1114,031,773 - 114,032,237UniSTS
Cytogenetic Map1 RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15655769122614963Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)125951907130917265Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134993530173445086Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)135377692217372257Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143579208126240667Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143579208126240667Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143579208126240667Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143579208126240667Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143579208126240667Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)143579208126240667Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143579208126240667Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)149147799156446783Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149578577169852184Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149578693217054291Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)158354072161711996Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)164588516125875986Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)166113339122614963Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)179134941113593716Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)179689548124689548Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)182788437239853971Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)183502376128502376Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)183656882126240667Rat
61344Bp29Blood pressure QTL 297.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185779320130779320Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)185917265130917265Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)186776571131776571Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)190804143161321256Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)191093646136093646Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)194201400184846632Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)194201400197187904Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)194225372130917265Rat
1300153Bp171Blood pressure QTL 1713.37arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194364073153076991Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)195304961156446783Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)199983293127203999Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)199983293188289386Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)199983293198656062Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)199983293216213510Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)199983293216325819Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1100131562236763528Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1100354344145354344Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1106002252202571904Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1108057233167517487Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1108417193153417193Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1108417193153417193Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1108986301161784422Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1108986301219232156Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1108986301219232156Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1108986301238830534Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1109634374154634374Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1110620749155620749Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1110620749155620749Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)1111446783156446783Rat
61346Rf2Renal disease susceptibility QTL 23.7urine protein amount (VT:0005160)urine protein level (CMO:0000591)1111446783156446783Rat
631569Bp93Blood pressure QTL 930.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1113593576129209407Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1113593576158593576Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1122614824201146953Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1122614824262664716Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1124090312169090312Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1124603592188289386Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1125875758262433692Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1126240667217054291Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1129208943174208943Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp93

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_disease overlaps with QTL for disease phenotypes of renal failure, stroke, ventricular mass, and salt susceptibility defined in other rat strains 68885
qtl_gene Sa gene has been ruled out as a candidate gene 68885
qtl_gene overlaps with genes Str1, Rf-2 and Lvm-2 68885