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ONTOLOGY REPORT - ANNOTATIONS

Term:anterior/posterior pattern specification
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Accession:GO:0009952 term browser browse the term
Definition:The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
Synonyms:related_synonym: anterior/posterior pattern formation

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anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:87912 (MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118)		 Ensembl
RGD		 PMID:10452853 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3689276 NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282 		JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102806|MGI:1095407|MGI:1857709|MGI:98728 (MGI:1344152|PMID:10452853), (MGI:3525050|PMID:15542835), (MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489)
(PMID:9916847)		 Ensembl
RGD		 PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003), (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568) RGD PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO MGI:108359 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458 		JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO MGI:104621|MGI:1857484 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249) RGD PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531 		JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:2449944 (MGI:2449253|PMID:12645927) RGD PMID:12645927 MGI:2449253 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein acts_upstream_of_or_within ISO MGI:2386454 (MGI:1355000|PMID:10727859) RGD PMID:10727859 MGI:1355000 NCBI chr 7:115,907,097...115,911,059
Ensembl chr 7:115,907,097...115,910,541 		JBrowse link
G Barx1 BARX homeobox 1 acts_upstream_of_or_within ISO MGI:3578634 (MGI:3766872|PMID:17855428) RGD PMID:17855428 MGI:3766872 NCBI chr17:14,824,721...14,828,196
Ensembl chr17:14,824,734...14,828,329 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:180,230,742...180,235,138
Ensembl chr 4:180,232,382...180,234,804 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342 (MGI:3051920|PMID:15136140) RGD PMID:15136140 MGI:3051920 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO MGI:2158503|MGI:87912 (MGI:1855789|PMID:10772805), (MGI:3525050|PMID:15542835) RGD PMID:10772805 PMID:15542835 MGI:1855789 MGI:3525050 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494 		JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO MGI:3823037|MGI:3841299 (MGI:3821803|PMID:18794365), (MGI:3840601|PMID:18974875) RGD PMID:18794365 PMID:18974875 MGI:3821803 MGI:3840601 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (MGI:3525050|PMID:15542835) RGD PMID:15542835 MGI:3525050 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949 		JBrowse link
G Cdx1 caudal type homeo box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154514|MGI:97858 (MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967)		 Ensembl
RGD		 PMID:7585967 PMID:11784046 GO_REF:0000107 MGI:2154839 MGI:77274 NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:88362 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565 		JBrowse link
G Cdx4 caudal type homeo box 4 acts_upstream_of_or_within ISO MGI:88361 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr  X:74,165,172...74,173,758
Ensembl chr  X:74,165,187...74,173,347 		JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO MGI:2668337|MGI:4430218 (MGI:3835694|PMID:18849982), (MGI:4429791|PMID:19357712) RGD PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1197794|PMID:9501024) RGD PMID:9501024 MGI:1197794 NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:97451 (MGI:2136711|PMID:11412024)		 RGD PMID:11412024, PMID:21873635 MGI:2136711, RGD:13792537 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:98493 (MGI:3614586|PMID:16399080) RGD PMID:16399080 MGI:3614586 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043 		JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 acts_upstream_of_or_within ISO MGI:3045424 (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027 		JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 acts_upstream_of_or_within ISO MGI:2183292|MGI:2679699 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 acts_upstream_of_or_within ISO MGI:1096359 (MGI:3703483|PMID:17067568) RGD PMID:17067568 MGI:3703483 NCBI chr 1:256,369,410...256,380,649
Ensembl chr 1:256,370,850...256,378,335 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:97490 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:99783 (MGI:1344734|PMID:10498685) RGD PMID:10498685 MGI:1344734 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2387775 (MGI:1934969|PMID:11358868) RGD PMID:11358868 MGI:1934969 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO MGI:4346364 (MGI:4367921|PMID:19877275) RGD PMID:19877275 MGI:4367921 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807 		JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449672|MGI:5544775 (MGI:1339513|PMID:10391213), (MGI:5509072|PMID:23918385) RGD PMID:10391213 PMID:23918385 MGI:1339513 MGI:5509072 NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95729 (MGI:5439039|PMID:22841643) RGD PMID:22841643 MGI:5439039 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:3798847|MGI:95728 (MGI:3053244|PMID:15315762), (MGI:5439039|PMID:22841643) RGD PMID:15315762 PMID:22841643 MGI:3053244 MGI:5439039 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036 		JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr14:21,039,990...21,056,413
Ensembl chr14:21,039,990...21,056,452 		JBrowse link
G Helt helt bHLH transcription factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:49,185,560...49,187,293
Ensembl chr16:49,185,560...49,187,293 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248 		JBrowse link
G Hes2 hes family bHLH transcription factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:169,338,097...169,339,142
Ensembl chr 5:169,338,097...169,339,142 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188 		JBrowse link
G Hes6 hes family bHLH transcription factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,549,698...98,551,438
Ensembl chr 9:98,549,705...98,551,438 		JBrowse link
G Hes7 hes family bHLH transcription factor 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,704,485...55,710,523
Ensembl chr10:55,707,164...55,709,687 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531 		JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905 		JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (MGI:3777521|PMID:16936074) RGD PMID:16936074 MGI:3777521 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1314872 (MGI:3619785|PMID:16537918)		 Ensembl
RGD		 PMID:16537918 GO_REF:0000107 MGI:3619785 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO MGI:1314872 (MGI:3619785|PMID:16537918) RGD PMID:16537918 MGI:3619785 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:2176174|MGI:2670936 (MGI:3578600|PMID:15872003) RGD PMID:15872003 MGI:3578600 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069|MGI:96182 (MGI:1346308|PMID:10529420), (MGI:3055618|PMID:15367676) RGD PMID:10529420 PMID:15367676 MGI:1346308 MGI:3055618 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066 		JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO MGI:96192|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:82,285,940...82,295,892
Ensembl chr 4:82,285,528...82,295,470
Ensembl chr 4:82,285,528...82,295,470 		JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96193|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:1857626 (MGI:1098901|PMID:9367425) RGD PMID:9367425 MGI:1098901 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96184|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:67616|PMID:7913519)		 RGD PMID:7913519 PMID:9441667, PMID:21873635 MGI:1195045 MGI:67616, RGD:13792537 NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385 		JBrowse link
G Hoxa4 homeo box A4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150391|MGI:96185|MGI:96208 (MGI:67413|PMID:7918106), (MGI:74948|PMID:7628700)		 RGD PMID:7628700 PMID:7918106, PMID:21873635 MGI:67413 MGI:74948, RGD:13792537 NCBI chr 4:82,158,234...82,160,317
Ensembl chr 4:82,158,892...82,160,240 		JBrowse link
G Hoxa5 homeo box A5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150397|MGI:3723623|MGI:96186|MGI:96196 (MGI:1203259|PMID:9603431), (MGI:3720535|PMID:17626057), (MGI:3723390|PMID:17417799), (MGI:63693|PMID:7901120)		 RGD PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057, PMID:21873635 MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693, RGD:13792537 NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207 		JBrowse link
G Hoxa6 homeobox A6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150392|MGI:96187|MGI:96197 (MGI:3720535|PMID:17626057), (MGI:67413|PMID:7918106)		 RGD PMID:7918106 PMID:17626057, PMID:21873635 MGI:3720535 MGI:67413, RGD:13792537 NCBI chr 4:82,173,478...82,183,597
Ensembl chr 4:82,173,293...82,263,302 		JBrowse link
G Hoxa7 homeobox A7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96188 (MGI:1313067|PMID:9784603)		 RGD PMID:9784603, PMID:21873635 MGI:1313067, RGD:13792537 NCBI chr 4:82,184,299...82,187,890
Ensembl chr 4:82,183,196...82,186,190 		JBrowse link
G Hoxa9 homeobox A9 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797), (MGI:85243|PMID:9013929)		 RGD PMID:8625797 PMID:9013929 PMID:17626057, PMID:21873635 MGI:3720535 MGI:78984 MGI:85243, RGD:13792537 NCBI chr 4:82,191,804...82,199,025
Ensembl chr 4:82,192,963...82,194,927 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1346308|PMID:10529420), (MGI:1859107|PMID:10885747) RGD PMID:10529420 PMID:10885747 MGI:1346308 MGI:1859107 NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:2151772|MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:85074|PMID:9012503) RGD PMID:9012503 PMID:10885747 MGI:1859107 MGI:85074 NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688 		JBrowse link
G Hoxb3 homeo box B3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:1859107|PMID:10885747)		 RGD PMID:9441667 PMID:10885747, PMID:21873635 MGI:1195045 MGI:1859107, RGD:13792537 NCBI chr10:84,170,629...84,196,823
Ensembl chr10:84,182,118...84,195,796 		JBrowse link
G Hoxb4 homeo box B4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:74948|PMID:7628700), (MGI:85074|PMID:9012503)		 RGD PMID:7628700 PMID:9012503 PMID:10885747, PMID:21873635 MGI:1859107 MGI:74948 MGI:85074, RGD:13792537 NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907 		JBrowse link
G Hoxb5 homeo box B5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151484|MGI:96177|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96196 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)		 RGD PMID:7828847 PMID:10885747 PMID:17626057, PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:84,152,152...84,154,360
Ensembl chr10:84,152,152...84,154,360 		JBrowse link
G Hoxb6 homeo box B6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151485|MGI:96178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190|MGI:96197 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847)		 RGD PMID:7828847 PMID:10885747 PMID:17626057, PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 NCBI chr10:84,147,331...84,150,238
Ensembl chr10:84,147,836...84,149,600 		JBrowse link
G Hoxb7 homeo box B7 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (MGI:1313067|PMID:9784603), (MGI:1859107|PMID:10885747)		 RGD PMID:9784603 PMID:10885747, PMID:21873635 MGI:1313067 MGI:1859107, RGD:13792537 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637 		JBrowse link
G Hoxb8 homeo box B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934178|MGI:2683089|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190|MGI:96198|MGI:96209 (MGI:1349283|PMID:10559485), (MGI:1859107|PMID:10885747), (MGI:1933164|PMID:11311170), (MGI:2681074|PMID:14623233)		 Ensembl
RGD		 PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 GO_REF:0000107 MGI:1349283 MGI:1859107 MGI:1933164 MGI:2681074 NCBI chr10:84,131,484...84,133,874
Ensembl chr10:84,131,495...84,133,246 		JBrowse link
G Hoxb9 homeo box B9 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:85243|PMID:9013929)		 RGD PMID:9013929 PMID:10885747 PMID:17626057, PMID:21873635 MGI:1859107 MGI:3720535 MGI:85243, RGD:13792537 NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390 		JBrowse link
G Hoxc10 homeo box C10 acts_upstream_of_or_within ISO MGI:96171|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:144,577,578...144,582,802
Ensembl chr 7:144,577,465...144,582,622 		JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO MGI:96172|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:144,565,392...144,568,580
Ensembl chr 7:144,565,392...144,567,580 		JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO MGI:1926422 (MGI:1195385|PMID:9420327) RGD PMID:9420327 MGI:1195385 NCBI chr 7:144,531,814...144,538,298
Ensembl chr 7:144,531,814...144,537,966 		JBrowse link
G Hoxc4 homeo box C4 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:1857570|MGI:2150683 (MGI:79121|PMID:8626021), (MGI:81673|PMID:8660891)
GO_REF:0000107		 RGD
Ensembl		 PMID:8626021 PMID:8660891, PMID:21873635 GO_REF:0000107 MGI:79121 MGI:81673, RGD:13792537 NCBI chr 7:144,646,605...144,652,589
Ensembl chr 7:144,647,587...144,650,129 		JBrowse link
G Hoxc5 homeo box C5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96177|MGI:96186 (MGI:3720535|PMID:17626057)		 RGD PMID:17626057, PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:144,628,120...144,631,542
Ensembl chr 7:144,628,120...144,631,542 		JBrowse link
G Hoxc6 homeo box C6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:96178|MGI:96187 (MGI:3720535|PMID:17626057)		 RGD PMID:17626057, PMID:21873635 MGI:3720535, RGD:13792537 NCBI chr 7:144,612,230...144,626,036
Ensembl chr 7:144,623,555...144,625,516 		JBrowse link
G Hoxc8 homeobox C8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149030|MGI:96189|MGI:96209 (MGI:1933164|PMID:11311170)		 Ensembl
RGD		 PMID:11311170 GO_REF:0000107 MGI:1933164 NCBI chr 7:144,605,072...144,607,639
Ensembl chr 7:144,605,058...144,608,538 		JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO MGI:2150685|MGI:96180|MGI:96190|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:73980|PMID:7547473) RGD PMID:7547473 PMID:17626057 MGI:3720535 MGI:73980 NCBI chr 7:144,592,462...144,598,807
Ensembl chr 7:144,595,960...144,598,632 		JBrowse link
G Hoxd10 homeo box D10 acts_upstream_of_or_within ISO MGI:96171|MGI:96192|MGI:96210 (MGI:1350864|PMID:10642795), (MGI:2667742|PMID:12869760) RGD PMID:10642795 PMID:12869760 MGI:1350864 MGI:2667742 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367 		JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172|MGI:96193 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400 		JBrowse link
G Hoxd13 homeo box D13 acts_upstream_of_or_within ISO MGI:1857871 (MGI:63627|PMID:8106170) RGD PMID:8106170 MGI:63627 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692 		JBrowse link
G Hoxd3 homeo box D3 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:1857959|MGI:96175|MGI:96184 (MGI:1195045|PMID:9441667), (MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
GO_REF:0000107		 RGD
Ensembl		 PMID:7910549 PMID:7913519 PMID:9441667, PMID:21873635 GO_REF:0000107 MGI:1195045 MGI:63793 MGI:67616, RGD:13792537 NCBI chr 3:61,650,569...61,670,285
Ensembl chr 3:61,658,245...61,670,282 		JBrowse link
G Hoxd4 homeo box D4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2151488|MGI:96176 (MGI:72992|PMID:7750651), (MGI:74948|PMID:7628700)		 RGD PMID:7628700 PMID:7750651, PMID:21873635 MGI:72992 MGI:74948, RGD:13792537 NCBI chr 3:61,634,005...61,653,581
Ensembl chr 3:61,634,005...61,651,056 		JBrowse link
G Hoxd8 homeobox D8 acts_upstream_of_or_within ISO MGI:2151815|MGI:96189|MGI:96198 (MGI:1933164|PMID:11311170) RGD PMID:11311170 MGI:1933164 NCBI chr 3:61,627,329...61,629,743
Ensembl chr 3:61,627,383...61,628,628 		JBrowse link
G Hoxd9 homeo box D9 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 PMID:21873635
MGI:2150414|MGI:96180|MGI:96190|MGI:96199|MGI:96202 (MGI:1350864|PMID:10642795), (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797)
GO_REF:0000107		 RGD
Ensembl		 PMID:8625797 PMID:10642795 PMID:17626057, PMID:21873635 GO_REF:0000107 MGI:1350864 MGI:3720535 MGI:78984, RGD:13792537 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:1857180 (MGI:3609520|PMID:16109169) RGD PMID:16109169 MGI:3609520 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527|MGI:3027342 (MGI:2660994|PMID:12701101), (MGI:3579954|PMID:15930098) RGD PMID:12701101 PMID:15930098 MGI:2660994 MGI:3579954 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1861960 (MGI:1336552|PMID:10220415) RGD PMID:10220415 MGI:1336552 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:3625774|PMID:16618927) RGD PMID:15741318 PMID:16618927 MGI:3530206 MGI:3625774 NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1347476 (MGI:1344734|PMID:10498685)		 UniProt
RGD		 PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G LOC100911511 homeobox protein Hox-A6-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:82,173,293...82,263,302 JBrowse link
G LOC102554748 nidogen-2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732 		JBrowse link
G LOC103692128 homeobox protein Hox-A9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:82,277,599...82,284,820
Ensembl chr 4:82,192,963...82,194,927
Ensembl chr 4:82,192,963...82,194,927 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1298218 (MGI:3045836|PMID:15142971)		 RGD PMID:15142971, PMID:21873635 MGI:3045836, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:1278315|MGI:1861309|MGI:2156191 (MGI:3045836|PMID:15142971), (MGI:3603992|PMID:16126904), (MGI:4413372|PMID:19795512) RGD PMID:15142971 PMID:16126904 PMID:19795512 MGI:3045836 MGI:3603992 MGI:4413372 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Mllt3 MLLT3, super elongation complex subunit acts_upstream_of_or_within ISO MGI:2388982 (MGI:2387913|PMID:12242306) RGD PMID:12242306 MGI:2387913 NCBI chr 5:106,103,498...106,202,559
Ensembl chr 5:106,103,407...106,207,126 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)		 Ensembl
RGD		 PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527 		JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:2148229 (MGI:3613103|PMID:16368089) RGD PMID:16368089 MGI:3613103 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:106676|MGI:2158732|MGI:2180793|MGI:2656539|MGI:3056345 (MGI:2136068|PMID:11418863), (MGI:2155575|PMID:11311163), (MGI:3042338|PMID:15004567), (MGI:3056019|PMID:15302604), (MGI:3624254|PMID:16496285) RGD PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:3579117|MGI:3579118 (MGI:3578605|PMID:15829524) RGD PMID:15829524 MGI:3578605 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473 		JBrowse link
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97451 (MGI:3039992|PMID:15105370)		 Ensembl
RGD		 PMID:15105370 GO_REF:0000107 MGI:3039992 NCBI chr14:106,861,556...106,864,933
Ensembl chr14:106,861,676...106,864,892 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:109448|MGI:1857502|MGI:2661067 (MGI:1197794|PMID:9501024), (MGI:2136711|PMID:11412024), (MGI:2656991|PMID:12652306) RGD PMID:9501024 PMID:11412024 PMID:12652306 MGI:1197794 MGI:2136711 MGI:2656991 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
Ensembl chr15:25,502,019...25,505,691 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:95388 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) RGD PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (MGI:2151355|PMID:11566859) RGD PMID:11566859 MGI:2151355 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002 		JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:1857633|MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:80640|PMID:8625838) RGD PMID:8625838 PMID:15741318 MGI:3530206 MGI:80640 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:18519639)
(MGI:3795695|PMID:18519639)		 RGD PMID:18519639 MGI:3795695 NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858 		JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO MGI:3847257 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr14:44,185,445...44,282,308
Ensembl chr14:44,185,446...44,280,079 		JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO MGI:1931079|MGI:88360 (MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780) RGD PMID:8388780 PMID:11784046 MGI:2154839 MGI:60925 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186 		JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within ISO MGI:1926913|MGI:99150 (MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538) RGD PMID:11060235 PMID:16624538 MGI:1926247 MGI:3628673 NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834 		JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO MGI:3706668 (MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:3703453 NCBI chr 5:139,379,256...139,466,805
Ensembl chr 5:139,385,429...139,466,081 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO MGI:96995|MGI:99161 (MGI:3530206|PMID:15741318) RGD PMID:15741318 MGI:3530206 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796 (MGI:1928592|PMID:11118883)
MGI:1934261|MGI:2387802 (MGI:2135419|PMID:11389830)		 RGD PMID:11118883 PMID:11389830 MGI:1928592 MGI:2135419 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857691|MGI:2668416 (MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863), (MGI:2667288|PMID:12842913)		 UniProt
RGD		 PMID:9529255 PMID:11418863 PMID:12842913 GO_REF:0000024 MGI:1201281 MGI:2136068 MGI:2667288 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078 		JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO MGI:1857691|MGI:2656539|MGI:2668393 (MGI:3051711|PMID:15215210) RGD PMID:15215210 MGI:3051711 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176256|MGI:2450929 (MGI:5438143|PMID:22987639)		 Ensembl
RGD		 PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104686|MGI:2179191 (MGI:3039048|PMID:15084464), (MGI:3614586|PMID:16399080)		 UniProt
RGD		 PMID:15084464 PMID:16399080 GO_REF:0000024 MGI:3039048 MGI:3614586 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO MGI:3042261|MGI:3042262|MGI:3042264 (MGI:3056222|PMID:15384171) RGD PMID:15384171 MGI:3056222 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:87912 (MGI:3695190|PMID:16845371) RGD PMID:16845371 MGI:3695190 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635 		JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO MGI:3721421 (MGI:3720547|PMID:17586487) RGD PMID:17586487 MGI:3720547 NCBI chr18:80,860,995...80,907,744
Ensembl chr18:80,862,372...80,865,584 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (MGI:3844764|PMID:19334287) RGD PMID:19334287 MGI:3844764 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:3835694|PMID:18849982) RGD PMID:18849982 MGI:3835694 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2178826 (MGI:1341483|PMID:10431240) RGD PMID:10431240 MGI:1341483 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3044441|PMID:15148409) RGD PMID:15148409 MGI:3044441 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) RGD PMID:15073149 PMID:19795512 MGI:3039991 MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO MGI:1101770|MGI:2445451 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953 		JBrowse link
G Zic3 Zic family member 3 acts_upstream_of_or_within ISO MGI:97359 (MGI:3624254|PMID:16496285) RGD PMID:16496285 MGI:3624254 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795 		JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3836420 (MGI:5449118|PMID:22939930)		 Ensembl
RGD		 PMID:22939930 GO_REF:0000107 MGI:5449118 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104903 (MGI:1889107|PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Cdx1 caudal type homeo box 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490 		JBrowse link
G Cdx2 caudal type homeo box 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565 		JBrowse link
G Cdx4 caudal type homeo box 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:74,165,172...74,173,758
Ensembl chr  X:74,165,187...74,173,347 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO MGI:107405|MGI:98658 (MGI:3042338|PMID:15004567), (MGI:3776330|PMID:18241853) RGD PMID:15004567 PMID:18241853 MGI:3042338 MGI:3776330 NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148590 (MGI:1353237|PMID:10662781)		 Ensembl
RGD		 PMID:10662781 GO_REF:0000107 MGI:1353237 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:4821075|PMID:16434966)		 Ensembl
RGD		 PMID:16434966 GO_REF:0000107 MGI:4821075 NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88180 (MGI:1889107|PMID:10964473)		 Ensembl
RGD		 PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1341884 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:1341800 (MGI:3530185|PMID:15680351) RGD PMID:15680351 MGI:3530185 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:2449177 (MGI:2448170|PMID:12490556) RGD PMID:12490556 MGI:2448170 NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167 		JBrowse link
G Lefty1 left right determination factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3042338|PMID:15004567) RGD PMID:15004567 MGI:3042338 NCBI chr13:99,212,778...99,217,786
Ensembl chr13:99,214,389...99,217,786 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (MGI:1346311|PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) RGD PMID:10529425 MGI:1346311 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963 		JBrowse link
G Rnf2 ring finger protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2447529 (MGI:2389282|PMID:12183370)		 Ensembl
RGD		 PMID:12183370 GO_REF:0000107 MGI:2389282 NCBI chr13:68,829,714...68,859,920
Ensembl chr13:68,830,620...68,858,809 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3794506|PMID:18321982) RGD PMID:18321982 MGI:3794506 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276 		JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:3044914 (MGI:3044041|PMID:15155583) RGD PMID:15155583 MGI:3044041 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1201414 (MGI:3776330|PMID:18241853) RGD PMID:18241853 MGI:3776330 NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISS
ISO		 GO_REF:0000024
(MGI:4397730|PMID:19841259)		 UniProt
RGD		 PMID:19841259 GO_REF:0000024 MGI:4397730 NCBI chr 2:266,315,036...266,431,220
Ensembl chr 2:266,315,036...266,432,558 		JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902 (MGI:3771246|PMID:18028899) RGD PMID:18028899 MGI:3771246 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793 		JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3580390 (MGI:3580203|PMID:15870281) RGD PMID:15870281 MGI:3580203 NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA		 (PMID:9054360)
GO_REF:0000107		 RGD
Ensembl		 PMID:9054360 GO_REF:0000107 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739 		JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) RGD PMID:28839193 MGI:6109647 NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9207801)		 UniProt
RGD		 PMID:9207801 GO_REF:0000024 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO MGI:3044616 (MGI:3043490|PMID:14668413) RGD PMID:14668413 MGI:3043490 NCBI chr 4:100,492,796...100,660,401
Ensembl chr 4:100,491,798...100,660,140 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1934206 (MGI:1303194|PMID:9790191) RGD PMID:9790191 MGI:1303194 NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO		 GO_REF:0000107
(MGI:4835157|PMID:9054360)		 Ensembl
RGD		 PMID:9054360 GO_REF:0000107 MGI:4835157 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:98956 (MGI:1891551|PMID:11029008)		 RGD PMID:11029008, PMID:21873635 MGI:1891551, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839484 (MGI:4839483|PMID:20630950) RGD PMID:20630950 MGI:4839483 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1298218 (MGI:1891551|PMID:11029008) RGD PMID:11029008 MGI:1891551 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035 		JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861919 (MGI:2181244|PMID:12001066)		 Ensembl
RGD		 PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857008 (MGI:2181244|PMID:12001066)		 Ensembl
RGD		 PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO MGI:1933734 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857877 (MGI:2181244|PMID:12001066) RGD PMID:12001066 MGI:2181244 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1860298 (MGI:3793375|PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777 		JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3583785 (MGI:3611958|PMID:16314491)		 Ensembl
RGD		 PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318 		JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO MGI:2179442 (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2386265 (MGI:87488|PMID:9136932) RGD PMID:9136932 MGI:87488 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965 		JBrowse link
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:2677178 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:8582276)		 Ensembl
RGD		 PMID:8582276 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:1859823 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr 4:50,309,281...50,312,608
Ensembl chr 4:50,309,281...50,312,608 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:1920441 (MGI:3702790|PMID:16971467) RGD PMID:16971467 MGI:3702790 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:2450901|MGI:98953 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:102764 (MGI:3772426|PMID:18094027) RGD PMID:18094027 MGI:3772426 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1856158 (MGI:892757|PMID:9169845)		 Ensembl
RGD		 PMID:9169845 GO_REF:0000107 MGI:892757 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567|MGI:2148569 (MGI:4360856|PMID:19686689), (MGI:4361775|PMID:19805295)		 Ensembl
RGD		 PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372 		JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:1261834 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420 		JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO MGI:98954 (MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (MGI:3525936|PMID:15607945) RGD PMID:15607945 MGI:3525936 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150347 (MGI:3720541|PMID:17601531) RGD PMID:17601531 MGI:3720541 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2156191 (MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512)		 RGD PMID:11029008 PMID:19795512, PMID:21873635 MGI:1891551 MGI:4413372, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (MGI:59176|PMID:2205396) RGD PMID:2205396 MGI:59176 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3578570|PMID:15857913)		 Ensembl
RGD		 PMID:15857913 GO_REF:0000107 MGI:3578570 NCBI chr 5:126,511,339...126,649,830
Ensembl chr 5:126,511,350...126,648,661 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1856382 (MGI:76584|PMID:8555108) RGD PMID:8555108 MGI:76584 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (MGI:3624192|PMID:16651541) RGD PMID:16651541 MGI:3624192 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877 (MGI:2149154|PMID:11500373)		 Ensembl
RGD		 PMID:11500373 GO_REF:0000107 MGI:2149154 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (MGI:2149134|PMID:11522634) RGD PMID:11522634 MGI:2149134 NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956 		JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) RGD PMID:17584735 MGI:3722519 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363 		JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5498583|PMID:23806618)		 UniProt
RGD		 PMID:23806618 GO_REF:0000024 MGI:5498583 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807 		JBrowse link
G Ofd1 OFD1, centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) RGD PMID:23806618 MGI:5498583 NCBI chr  X:29,562,165...29,602,934
Ensembl chr  X:29,562,165...29,602,925 		JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISS
ISO		 GO_REF:0000024
(MGI:5545944|PMID:23072809)		 UniProt
RGD		 PMID:23072809 GO_REF:0000024 MGI:5545944 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953 		JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within ISO MGI:5317888 (MGI:5317364|PMID:21795391) RGD PMID:21795391 MGI:5317364 NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689 		JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3765258|PMID:12755329)		 Ensembl
RGD		 PMID:12755329 GO_REF:0000107 MGI:3765258 NCBI chr 2:211,183,410...211,207,458
Ensembl chr 2:211,183,311...211,207,465 		JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pld6 phospholipase D family, member 6 involved_in ISO (MGI:4943609|PMID:21397848) RGD PMID:21397848 MGI:4943609 NCBI chr10:46,142,313...46,145,774
Ensembl chr10:46,142,801...46,145,548 		JBrowse link
G Tdrd5 tudor domain containing 5 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4946318|PMID:21383078)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:73,872,637...73,922,640
Ensembl chr13:73,872,621...73,921,969 		JBrowse link
polarity specification of anterior/posterior axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5559673|PMID:11044396)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11044396 GO_REF:0000024 GO_REF:0000107 MGI:5559673 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Wnt8a Wnt family member 8A acts_upstream_of_or_within ISO (MGI:3609071|PMID:16256739) RGD PMID:16256739 MGI:3609071 NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829 		JBrowse link
pole plasm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr77 WD repeat domain 77 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,577,292...208,587,263
Ensembl chr 2:208,420,309...208,587,260
Ensembl chr 2:208,420,309...208,587,260 		JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO MGI:1891557 (MGI:5546318|PMID:23552073) RGD PMID:23552073 MGI:5546318 NCBI chr11:36,075,709...36,092,495
Ensembl chr11:36,075,709...36,092,495 		JBrowse link
G Foxa2 forkhead box A2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857725 (MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535 (MGI:3611720|PMID:16368929) RGD PMID:16368929 MGI:3611720 NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:4999724|MGI:97359 (MGI:4950786|PMID:21445260) RGD PMID:21445260 MGI:4950786 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857502|MGI:1857848 (MGI:2157654|PMID:11291865)		 UniProt
RGD		 PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:98958 (MGI:4413372|PMID:19795512)		 RGD PMID:19795512, PMID:21873635 MGI:4413372, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:96086 (MGI:4950786|PMID:21445260) RGD PMID:21445260 MGI:4950786 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857502 (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
Ensembl chr15:25,502,019...25,505,691 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (MGI:1312998|PMID:9799237) RGD PMID:9799237 MGI:1312998 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (MGI:4413372|PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha involved_in ISO UniProtKB:F6T226 (PMID:15687260) RGD PMID:15687260 NCBI chr 8:109,481,352...109,621,462
Ensembl chr 8:109,482,614...109,621,408 		JBrowse link
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISO
IEA		 (PMID:8582276)
GO_REF:0000107		 RGD
Ensembl		 PMID:8582276 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386 		JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdx1 caudal type homeo box 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5301472|PMID:22015720)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22015720 GO_REF:0000024 GO_REF:0000107 MGI:5301472 NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490 		JBrowse link
G Cdx2 caudal type homeo box 2 involved_in ISO (MGI:5301472|PMID:22015720) RGD PMID:22015720 MGI:5301472 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5689216|PMID:26114479)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:26114479 GO_REF:0000024 GO_REF:0000107 MGI:5689216 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO MGI:3512139|MGI:97487 (MGI:3820487|PMID:17974128) RGD PMID:17974128 MGI:3820487 NCBI chr 1:243,662,819...243,669,312
Ensembl chr 1:243,662,823...243,669,312 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 ISO (PMID:19061953)
MGI:1933734 (MGI:4367298|PMID:19779553)		 RGD PMID:19061953 PMID:19779553 MGI:4367298 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230 (MGI:72973|PMID:7789282) RGD PMID:7789282 MGI:72973 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO MGI:1330307|MGI:1856173 (MGI:3820487|PMID:17974128) RGD PMID:17974128 MGI:3820487 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172 		JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1100864|MGI:1857891 (MGI:3578715|PMID:15889094) RGD PMID:15889094 MGI:3578715 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
rostrocaudal neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO (PMID:20093472) RGD PMID:20093472 NCBI chr  X:11,137,889...11,164,854
Ensembl chr  X:11,136,939...11,164,915 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (MGI:82985|PMID:8887324) RGD PMID:8887324 MGI:82985 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:2179440 (MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907 		JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1857725 (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481 		JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535 (MGI:3611720|PMID:16368929) RGD PMID:16368929 MGI:3611720 NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998 		JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:5448825 (MGI:5448135|PMID:22949634) RGD PMID:22949634 MGI:5448135 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944 		JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO MGI:1857502|MGI:1857848 (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3580268 (MGI:4459001|PMID:20346937)		 RGD PMID:20346937, PMID:21873635 MGI:4459001, RGD:13792537 NCBI chr 1:141,550,633...141,553,239
Ensembl chr 1:141,550,633...141,553,230 		JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein acts_upstream_of_or_within ISO MGI:5438570 (MGI:5438472|PMID:21998026) RGD PMID:21998026 MGI:5438472 NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857502 (MGI:2157654|PMID:11291865) RGD PMID:11291865 MGI:2157654 NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691
Ensembl chr15:25,502,019...25,505,691 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO MGI:2685968 (MGI:4459001|PMID:20346937) RGD PMID:20346937 MGI:4459001 NCBI chr  X:111,099,420...111,114,835
Ensembl chr  X:111,099,930...111,102,464 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in		 ISO MGI:3614797 (MGI:4459001|PMID:20346937)
(MGI:3613215|PMID:16326386)		 RGD PMID:16326386 PMID:20346937 MGI:3613215 MGI:4459001 NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1858049 (MGI:1195384|PMID:9420335)		 Ensembl
RGD		 PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199 		JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) RGD PMID:20346937 MGI:4459001 NCBI chr 1:198,214,797...198,218,706
Ensembl chr 1:198,214,797...198,218,706 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297 		JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:7586755)		 Ensembl
RGD		 PMID:7586755 GO_REF:0000107 NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3038950 (MGI:3034157|PMID:14960495)		 Ensembl
RGD		 PMID:14960495 GO_REF:0000107 MGI:3034157 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Meox1 mesenchyme homeobox 1 acts_upstream_of_or_within ISO MGI:103219 (MGI:2669571|PMID:12925591) RGD PMID:12925591 MGI:2669571 NCBI chr10:89,797,011...89,817,009
Ensembl chr10:89,797,038...89,816,491 		JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:103220 (MGI:2669571|PMID:12925591)		 Ensembl
RGD		 PMID:12925591 GO_REF:0000107 MGI:2669571 NCBI chr 6:56,625,768...56,689,195
Ensembl chr 6:56,625,650...56,689,238 		JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3578145 (MGI:3577662|PMID:15755804)		 Ensembl
RGD		 PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (MGI:3624894|PMID:16687486) RGD PMID:16687486 MGI:3624894 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:3037351|PMID:12636920)		 Ensembl
RGD		 PMID:12636920 GO_REF:0000107 MGI:3037351 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158343 (MGI:3702797|PMID:16943278) RGD PMID:16943278 MGI:3702797 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5296388|PMID:22072575)		 UniProt
RGD		 PMID:22072575 GO_REF:0000024 MGI:5296388 NCBI chr 3:22,037,812...22,061,247
Ensembl chr 3:22,038,357...22,058,871 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1096325 (MGI:3578712|PMID:15902259)
(MGI:5545944|PMID:23072809)		 UniProt
RGD		 PMID:15902259 PMID:23072809 GO_REF:0000024 MGI:3578712 MGI:5545944 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857008 (MGI:1095777|PMID:9272948), (MGI:3620337|PMID:15170697)		 Ensembl
RGD		 PMID:9272948 PMID:15170697 GO_REF:0000107 MGI:1095777 MGI:3620337 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685 		JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO MGI:1343101 (MGI:3583034|PMID:15937931) RGD PMID:15937931 MGI:3583034 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3771770|PMID:18064677)		 UniProt
RGD		 PMID:18064677 GO_REF:0000024 MGI:3771770 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO UniProtKB:Q61850 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484 		JBrowse link
G Foxc2 forkhead box C2 involved_in ISO UniProtKB:Q61572 (MGI:2150572|PMID:11562355) RGD PMID:11562355 MGI:2150572 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1929432 (MGI:1928688|PMID:11124112) RGD PMID:11124112 MGI:1928688 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086 		JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO MGI:2652222|MGI:3046536 (MGI:2152470|PMID:11641270), (MGI:3046002|PMID:15170214), (MGI:4367298|PMID:19779553) RGD PMID:11641270 PMID:15170214 PMID:19779553 MGI:2152470 MGI:3046002 MGI:4367298 NCBI chr10:55,704,485...55,710,523
Ensembl chr10:55,707,164...55,709,687 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) RGD PMID:15857914 MGI:3578569 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:1276116|MGI:3711317 (MGI:3583034|PMID:15937931), (MGI:3709911|PMID:17325035) RGD PMID:15937931 PMID:17325035 MGI:3583034 MGI:3709911 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1933764|MGI:98504 (MGI:1334099|PMID:10090727), (MGI:3510574|PMID:15545629)		 Ensembl
RGD		 PMID:10090727 PMID:15545629 GO_REF:0000107 MGI:1334099 MGI:3510574 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(MGI:5545944|PMID:23072809)
MGI:3775061 (MGI:3774705|PMID:18234727)		 UniProt
RGD		 PMID:18234727 PMID:23072809 GO_REF:0000024 MGI:3774705 MGI:5545944 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO MGI:4839486 (MGI:4839544|PMID:20589884) RGD PMID:20589884 MGI:4839544 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:104659|MGI:3580268 (MGI:3578712|PMID:15902259) RGD PMID:15902259 MGI:3578712 NCBI chr 1:141,550,633...141,553,239
Ensembl chr 1:141,550,633...141,553,230 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (MGI:3603078|PMID:16000382) RGD PMID:16000382 MGI:3603078 NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920 		JBrowse link
G Msgn1 mesogenin 1 acts_upstream_of_or_within ISO MGI:1933263 (MGI:1928575|PMID:11124811), (MGI:5545970|PMID:21750544) RGD PMID:11124811 PMID:21750544 MGI:1928575 MGI:5545970 NCBI chr 6:36,876,165...36,876,805
Ensembl chr 6:36,876,165...36,876,805 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219|MGI:1857973|MGI:2449231 (MGI:1861090|PMID:10929709), (MGI:3849775|PMID:19531352), (MGI:78390|PMID:8565825) RGD PMID:8565825 PMID:10929709 PMID:19531352 MGI:1861090 MGI:3849775 MGI:78390 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764 		JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO MGI:1857220 (MGI:76810|PMID:7588068) RGD PMID:7588068 MGI:76810 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540 		JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (MGI:3701029|PMID:16831833) RGD PMID:16831833 MGI:3701029 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990 		JBrowse link
G Nkx3-1 NK3 homeobox 1 acts_upstream_of_or_within ISO (PMID:9621431) RGD PMID:9621431 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO MGI:2176174|MGI:5553357 (MGI:5608942|PMID:24875805) RGD PMID:24875805 MGI:5608942 NCBI chr10:70,250,959...70,261,880
Ensembl chr10:70,250,959...70,259,553 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:3801303 (MGI:4459579|PMID:20484223) RGD PMID:20484223 MGI:4459579 NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520 		JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO MGI:3603176 (MGI:3590033|PMID:16093716) RGD PMID:16093716 MGI:3590033 NCBI chr 3:141,577,124...141,589,849
Ensembl chr 3:141,577,504...141,589,849 		JBrowse link
G Pcdh8 protocadherin 8 acts_upstream_of_or_within ISO (MGI:2451199|PMID:12591245) RGD PMID:12591245 MGI:2451199 NCBI chr15:62,196,469...62,201,498
Ensembl chr15:62,197,060...62,200,837 		JBrowse link
G Plxna2 plexin A2 acts_upstream_of_or_within ISO (PMID:19666519) RGD PMID:19666519 NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648 		JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within ISO MGI:2662305 (MGI:2660984|PMID:12697902) RGD PMID:12697902 MGI:2660984 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137554 (MGI:1267118|PMID:9636176)		 Ensembl
RGD		 PMID:9636176 GO_REF:0000107 MGI:1267118 NCBI chr11:64,761,493...64,788,210
Ensembl chr11:64,761,146...64,788,208 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (MGI:3624894|PMID:16687486) RGD PMID:16687486 MGI:3624894 NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284|MGI:1930934 (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553), (MGI:87649|PMID:9153393) RGD PMID:9153393 PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 MGI:87649 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553) RGD PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:1857411 (MGI:4367298|PMID:19779553) RGD PMID:19779553 MGI:4367298 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in		 ISO MGI:3513254 (MGI:3715395|PMID:17531978)
(MGI:3613215|PMID:16326386)		 RGD PMID:16326386 PMID:17531978 MGI:3613215 MGI:3715395 NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (MGI:3037488|PMID:14745966) RGD PMID:14745966 MGI:3037488 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386 		JBrowse link
G Sema3c semaphorin 3C acts_upstream_of_or_within ISO (PMID:19666519) RGD PMID:19666519 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within ISO MGI:108078 (MGI:3618960|PMID:16467359), (PMID:10654605) RGD PMID:10654605 PMID:16467359 MGI:3618960 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:892014 (MGI:3618960|PMID:16467359) RGD PMID:16467359 MGI:3618960 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:3044914 (MGI:3044041|PMID:15155583)		 RGD PMID:15155583, PMID:21873635 MGI:3044041, RGD:13792537 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363 		JBrowse link
G Tbx19 T-box transcription factor 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1856158|MGI:1857760|MGI:3042264 (MGI:3056222|PMID:15384171), (MGI:3701028|PMID:16835439), (MGI:64493|PMID:8293872)		 RGD PMID:8293872 PMID:15384171 PMID:16835439, PMID:21873635 MGI:3056222 MGI:3701028 MGI:64493, RGD:13792537 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832 		JBrowse link
G Tcap titin-cap acts_upstream_of_or_within ISO (PMID:9817758) RGD PMID:9817758 NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:84545|PMID:8955271) RGD PMID:8955271 MGI:84545 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1343101 (MGI:3709913|PMID:17320900) RGD PMID:17320900 MGI:3709913 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449 		JBrowse link
G Ttn titin acts_upstream_of_or_within ISO (PMID:9817758) RGD PMID:9817758 NCBI chr 3:63,565,160...63,837,815 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857088|MGI:1857489 (MGI:3037351|PMID:12636920), (MGI:3611726|PMID:16291790), (MGI:64780|PMID:8299937) RGD PMID:8299937 PMID:12636920 PMID:16291790 MGI:3037351 MGI:3611726 MGI:64780 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (MGI:4413372|PMID:19795512)		 Ensembl
RGD		 PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:1927345 (MGI:3708426|PMID:17116431) RGD PMID:17116431 MGI:3708426 NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387501 (MGI:3590396|PMID:16157277), (MGI:3624924|PMID:16598713) RGD PMID:16157277 PMID:16598713 MGI:3590396 MGI:3624924 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865 		JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667 		JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3697513|PMID:16790474)		 UniProt
RGD		 PMID:16790474 GO_REF:0000024 MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667 		JBrowse link
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:10706139), (PMID:17118062)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10706139 PMID:17118062 GO_REF:0000024 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO MGI:2449672 (MGI:3701017|PMID:16790475) RGD PMID:16790475 MGI:3701017 NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856 		JBrowse link
thorax and anterior abdomen determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:62488|PMID:8395349)		 UniProt
RGD		 PMID:8395349 GO_REF:0000024 MGI:62488 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564 		JBrowse link
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) RGD PMID:14511481 MGI:2677178 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO MGI:108078|MGI:892014 (MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:3793375 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
Ensembl chr 1:248,895,738...248,898,607 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2673982 (MGI:3055483|PMID:15469977)		 RGD PMID:15469977, PMID:21873635 MGI:3055483, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108078|MGI:1329040 (MGI:3793375|PMID:18257070)		 Ensembl
RGD		 PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:1329040|MGI:892014 (MGI:3793375|PMID:18257070) RGD PMID:18257070 MGI:3793375 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764 		JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IDA RGD PMID:25281935 RGD:12832757 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (MGI:3701029|PMID:16831833) RGD PMID:16831833 MGI:3701029 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181754|MGI:97359 (MGI:1858546|PMID:10809672)		 Ensembl
RGD		 PMID:10809672 GO_REF:0000107 MGI:1858546 NCBI chr 1:126,749,508...126,947,392
Ensembl chr 1:126,749,508...126,947,392 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    multicellular organismal process 8912
      pattern specification process 492
        regionalization 386
          anterior/posterior pattern specification 238
            anterior region determination 0
            anterior/posterior axis specification + 56
            anterior/posterior pattern specification involved in kidney development + 2
            anterior/posterior pattern specification, imaginal disc + 0
            compartment pattern specification + 4
            embryonic heart tube anterior/posterior pattern specification + 3
            forebrain anterior/posterior pattern specification 4
            foregut regionalization + 3
            neural plate anterior/posterior regionalization + 6
            periodic partitioning by pair rule gene 0
            posterior abdomen determination + 0
            rostrocaudal neural tube patterning + 14
            somitogenesis + 77
            spinal cord anterior/posterior patterning + 1
            thorax and anterior abdomen determination + 3
Path 2
Term Annotations click to browse term
  biological_process 19638
    developmental process 6777
      anatomical structure development 6250
        multicellular organism development 5734
          pattern specification process 492
            regionalization 386
              anterior/posterior pattern specification 238
                anterior region determination 0
                anterior/posterior axis specification + 56
                anterior/posterior pattern specification involved in kidney development + 2
                anterior/posterior pattern specification, imaginal disc + 0
                compartment pattern specification + 4
                embryonic heart tube anterior/posterior pattern specification + 3
                forebrain anterior/posterior pattern specification 4
                foregut regionalization + 3
                neural plate anterior/posterior regionalization + 6
                periodic partitioning by pair rule gene 0
                posterior abdomen determination + 0
                rostrocaudal neural tube patterning + 14
                somitogenesis + 77
                spinal cord anterior/posterior patterning + 1
                thorax and anterior abdomen determination + 3
paths to the root