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G |
AABR07034833.1 |
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involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr12:53,872...54,885
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G |
AABR07071701.1 |
|
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 8:126,975,833...126,976,850
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G |
Acvr2a |
activin A receptor type 2A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:87912 (MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118) |
Ensembl RGD |
PMID:10452853 PMID:16991118 |
GO_REF:0000107 MGI:1344152 MGI:3689276 |
NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
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G |
Acvr2b |
activin A receptor type 2B |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:102806|MGI:1095407|MGI:1857709|MGI:98728 (MGI:1344152|PMID:10452853), (MGI:3525050|PMID:15542835), (MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489) (PMID:9916847) |
Ensembl RGD |
PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 |
GO_REF:0000107 MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 |
NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
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G |
Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:1096359|MGI:1857891|MGI:2180721|MGI:2679699 (MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003), (MGI:3612223|PMID:16368932), (MGI:3703483|PMID:17067568) |
RGD |
PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 |
MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 |
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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G |
Alx1 |
ALX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:108359 (MGI:1314705|PMID:9847249) |
RGD |
PMID:9847249 |
MGI:1314705 |
NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
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G |
Alx4 |
ALX homeobox 4 |
acts_upstream_of_or_within |
ISO |
MGI:104621|MGI:1857484 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249) |
RGD |
PMID:9374397 PMID:9847249 |
MGI:1098911 MGI:1314705 |
NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
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G |
Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:2449944 (MGI:2449253|PMID:12645927) |
RGD |
PMID:12645927 |
MGI:2449253 |
NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
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G |
Arc |
activity-regulated cytoskeleton-associated protein |
acts_upstream_of_or_within |
ISO |
MGI:2386454 (MGI:1355000|PMID:10727859) |
RGD |
PMID:10727859 |
MGI:1355000 |
NCBI chr 7:115,907,097...115,911,059
Ensembl chr 7:115,907,097...115,910,541
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G |
Barx1 |
BARX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3578634 (MGI:3766872|PMID:17855428) |
RGD |
PMID:17855428 |
MGI:3766872 |
NCBI chr17:14,824,721...14,828,196
Ensembl chr17:14,824,734...14,828,329
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G |
Bhlhe40 |
basic helix-loop-helix family, member e40 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
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G |
Bhlhe41 |
basic helix-loop-helix family, member e41 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:180,230,742...180,235,138
Ensembl chr 4:180,232,382...180,234,804
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G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2158342 (MGI:3051920|PMID:15136140) |
RGD |
PMID:15136140 |
MGI:3051920 |
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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G |
Bmpr2 |
bone morphogenetic protein receptor type 2 |
acts_upstream_of_or_within |
ISO |
MGI:2158503|MGI:87912 (MGI:1855789|PMID:10772805), (MGI:3525050|PMID:15542835) |
RGD |
PMID:10772805 PMID:15542835 |
MGI:1855789 MGI:3525050 |
NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
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Bptf |
bromodomain PHD finger transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:3823037|MGI:3841299 (MGI:3821803|PMID:18794365), (MGI:3840601|PMID:18974875) |
RGD |
PMID:18794365 PMID:18974875 |
MGI:3821803 MGI:3840601 |
NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
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G |
Btg2 |
BTG anti-proliferation factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3525505 (MGI:3525050|PMID:15542835) |
RGD |
PMID:15542835 |
MGI:3525050 |
NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
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G |
Cdon |
cell adhesion associated, oncogene regulated |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2653120 (MGI:4422144|PMID:19754878) |
Ensembl RGD |
PMID:19754878 |
GO_REF:0000107 MGI:4422144 |
NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
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G |
Cdx1 |
caudal type homeo box 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2154514|MGI:97858 (MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967) |
Ensembl RGD |
PMID:7585967 PMID:11784046 |
GO_REF:0000107 MGI:2154839 MGI:77274 |
NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490
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G |
Cdx2 |
caudal type homeo box 2 |
acts_upstream_of_or_within |
ISO |
MGI:88362 (MGI:4398801|PMID:19853565) |
RGD |
PMID:19853565 |
MGI:4398801 |
NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
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G |
Cdx4 |
caudal type homeo box 4 |
acts_upstream_of_or_within |
ISO |
MGI:88361 (MGI:4398801|PMID:19853565) |
RGD |
PMID:19853565 |
MGI:4398801 |
NCBI chr X:74,165,172...74,173,758
Ensembl chr X:74,165,187...74,173,347
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G |
Celsr1 |
cadherin, EGF LAG seven-pass G-type receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2668337|MGI:4430218 (MGI:3835694|PMID:18849982), (MGI:4429791|PMID:19357712) |
RGD |
PMID:18849982 PMID:19357712 |
MGI:3835694 MGI:4429791 |
NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
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G |
Cer1 |
cerberus 1, DAN family BMP antagonist |
acts_upstream_of_or_within |
ISO |
(MGI:1197794|PMID:9501024) |
RGD |
PMID:9501024 |
MGI:1197794 |
NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375
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G |
Cfc1 |
cripto, FRL-1, cryptic family 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:97451 (MGI:2136711|PMID:11412024) |
RGD |
PMID:11412024, PMID:21873635 |
MGI:2136711, RGD:13792537 |
NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024
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G |
Crkl |
CRK like proto-oncogene, adaptor protein |
acts_upstream_of_or_within |
ISO |
MGI:98493 (MGI:3614586|PMID:16399080) |
RGD |
PMID:16399080 |
MGI:3614586 |
NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
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|
G |
Ctnnbip1 |
catenin, beta-interacting protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3045424 (MGI:3044441|PMID:15148409) |
RGD |
PMID:15148409 |
MGI:3044441 |
NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
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G |
Cyp26a1 |
cytochrome P450, family 26, subfamily a, polypeptide 1 |
acts_upstream_of_or_within |
ISO |
MGI:2183292|MGI:2679699 (MGI:3703483|PMID:17067568) |
RGD |
PMID:17067568 |
MGI:3703483 |
NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729
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G |
Cyp26c1 |
cytochrome P450, family 26, subfamily C, polypeptide 1 |
acts_upstream_of_or_within |
ISO |
MGI:1096359 (MGI:3703483|PMID:17067568) |
RGD |
PMID:17067568 |
MGI:3703483 |
NCBI chr 1:256,369,410...256,380,649
Ensembl chr 1:256,370,850...256,378,335
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|
G |
Emx2 |
empty spiracles homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2148858|MGI:97490 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) |
RGD |
PMID:12196586 PMID:15917450 |
MGI:2386059 MGI:3578670 |
NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
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G |
Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:99783 (MGI:1344734|PMID:10498685) |
RGD |
PMID:10498685 |
MGI:1344734 |
NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
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G |
Foxh1 |
forkhead box H1 |
acts_upstream_of_or_within |
ISO |
MGI:2387775 (MGI:1934969|PMID:11358868) |
RGD |
PMID:11358868 |
MGI:1934969 |
NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
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|
G |
Fuz |
fuzzy planar cell polarity protein |
acts_upstream_of_or_within |
ISO |
MGI:4346364 (MGI:4367921|PMID:19877275) |
RGD |
PMID:19877275 |
MGI:4367921 |
NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
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G |
Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
MGI:2449672|MGI:5544775 (MGI:1339513|PMID:10391213), (MGI:5509072|PMID:23918385) |
RGD |
PMID:10391213 PMID:23918385 |
MGI:1339513 MGI:5509072 |
NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856
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|
G |
Gli2 |
GLI family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:95729 (MGI:5439039|PMID:22841643) |
RGD |
PMID:22841643 |
MGI:5439039 |
NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
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G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856276|MGI:3798847|MGI:95728 (MGI:3053244|PMID:15315762), (MGI:5439039|PMID:22841643) |
RGD |
PMID:15315762 PMID:22841643 |
MGI:3053244 MGI:5439039 |
NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
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|
G |
Grsf1 |
G-rich RNA sequence binding factor 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3578569|PMID:15857914) |
RGD |
PMID:15857914 |
MGI:3578569 |
NCBI chr14:21,039,990...21,056,413
Ensembl chr14:21,039,990...21,056,452
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G |
Helt |
helt bHLH transcription factor |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:49,185,560...49,187,293
Ensembl chr16:49,185,560...49,187,293
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G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
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G |
Hes2 |
hes family bHLH transcription factor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:169,338,097...169,339,142
Ensembl chr 5:169,338,097...169,339,142
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G |
Hes3 |
hes family bHLH transcription factor 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153
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G |
Hes5 |
hes family bHLH transcription factor 5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
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G |
Hes6 |
hes family bHLH transcription factor 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:98,549,698...98,551,438
Ensembl chr 9:98,549,705...98,551,438
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G |
Hes7 |
hes family bHLH transcription factor 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr10:55,704,485...55,710,523
Ensembl chr10:55,707,164...55,709,687
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G |
Hey1 |
hes-related family bHLH transcription factor with YRPW motif 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
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G |
Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
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G |
Heyl |
hes-related family bHLH transcription factor with YRPW motif-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
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G |
Hhex |
hematopoietically expressed homeobox |
involved_in |
ISO |
(MGI:3777521|PMID:16936074) |
RGD |
PMID:16936074 |
MGI:3777521 |
NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
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G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1314872 (MGI:3619785|PMID:16537918) |
Ensembl RGD |
PMID:16537918 |
GO_REF:0000107 MGI:3619785 |
NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079
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G |
Hipk2 |
homeodomain interacting protein kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:1314872 (MGI:3619785|PMID:16537918) |
RGD |
PMID:16537918 |
MGI:3619785 |
NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
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G |
Hnf1b |
HNF1 homeobox B |
acts_upstream_of_or_within |
ISO |
MGI:2176174|MGI:2670936 (MGI:3578600|PMID:15872003) |
RGD |
PMID:15872003 |
MGI:3578600 |
NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
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G |
Hoxa1 |
homeobox A1 |
acts_upstream_of_or_within |
ISO |
MGI:3056069|MGI:96182 (MGI:1346308|PMID:10529420), (MGI:3055618|PMID:15367676) |
RGD |
PMID:10529420 PMID:15367676 |
MGI:1346308 MGI:3055618 |
NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
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G |
Hoxa10 |
homeobox A10 |
acts_upstream_of_or_within |
ISO |
MGI:96192|MGI:96202 (MGI:2667742|PMID:12869760) |
RGD |
PMID:12869760 |
MGI:2667742 |
NCBI chr 4:82,285,940...82,295,892
Ensembl chr 4:82,285,528...82,295,470 Ensembl chr 4:82,285,528...82,295,470
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G |
Hoxa11 |
homeobox A11 |
acts_upstream_of_or_within |
ISO |
MGI:96193|MGI:96203 (MGI:2667742|PMID:12869760) |
RGD |
PMID:12869760 |
MGI:2667742 |
NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503 Ensembl chr 4:82,298,152...82,300,503
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G |
Hoxa2 |
homeobox A2 |
acts_upstream_of_or_within |
ISO |
MGI:1857626 (MGI:1098901|PMID:9367425) |
RGD |
PMID:9367425 |
MGI:1098901 |
NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
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G |
Hoxa3 |
homeobox A3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96184|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:67616|PMID:7913519) |
RGD |
PMID:7913519 PMID:9441667, PMID:21873635 |
MGI:1195045 MGI:67616, RGD:13792537 |
NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385
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G |
Hoxa4 |
homeo box A4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150391|MGI:96185|MGI:96208 (MGI:67413|PMID:7918106), (MGI:74948|PMID:7628700) |
RGD |
PMID:7628700 PMID:7918106, PMID:21873635 |
MGI:67413 MGI:74948, RGD:13792537 |
NCBI chr 4:82,158,234...82,160,317
Ensembl chr 4:82,158,892...82,160,240
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G |
Hoxa5 |
homeo box A5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150397|MGI:3723623|MGI:96186|MGI:96196 (MGI:1203259|PMID:9603431), (MGI:3720535|PMID:17626057), (MGI:3723390|PMID:17417799), (MGI:63693|PMID:7901120) |
RGD |
PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057, PMID:21873635 |
MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693, RGD:13792537 |
NCBI chr 4:82,170,383...82,174,788
Ensembl chr 4:82,170,387...82,173,207
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G |
Hoxa6 |
homeobox A6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150392|MGI:96187|MGI:96197 (MGI:3720535|PMID:17626057), (MGI:67413|PMID:7918106) |
RGD |
PMID:7918106 PMID:17626057, PMID:21873635 |
MGI:3720535 MGI:67413, RGD:13792537 |
NCBI chr 4:82,173,478...82,183,597
Ensembl chr 4:82,173,293...82,263,302
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G |
Hoxa7 |
homeobox A7 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96188 (MGI:1313067|PMID:9784603) |
RGD |
PMID:9784603, PMID:21873635 |
MGI:1313067, RGD:13792537 |
NCBI chr 4:82,184,299...82,187,890
Ensembl chr 4:82,183,196...82,186,190
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G |
Hoxa9 |
homeobox A9 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150411|MGI:96190|MGI:96199|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797), (MGI:85243|PMID:9013929) |
RGD |
PMID:8625797 PMID:9013929 PMID:17626057, PMID:21873635 |
MGI:3720535 MGI:78984 MGI:85243, RGD:13792537 |
NCBI chr 4:82,191,804...82,199,025
Ensembl chr 4:82,192,963...82,194,927
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Hoxb1 |
homeo box B1 |
acts_upstream_of_or_within |
ISO |
MGI:96170|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1346308|PMID:10529420), (MGI:1859107|PMID:10885747) |
RGD |
PMID:10529420 PMID:10885747 |
MGI:1346308 MGI:1859107 |
NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687
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|
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Hoxb2 |
homeobox B2 |
acts_upstream_of_or_within |
ISO |
MGI:2151772|MGI:96182|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:85074|PMID:9012503) |
RGD |
PMID:9012503 PMID:10885747 |
MGI:1859107 MGI:85074 |
NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
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G |
Hoxb3 |
homeo box B3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96175|MGI:96182|MGI:96183|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96207 (MGI:1195045|PMID:9441667), (MGI:1859107|PMID:10885747) |
RGD |
PMID:9441667 PMID:10885747, PMID:21873635 |
MGI:1195045 MGI:1859107, RGD:13792537 |
NCBI chr10:84,170,629...84,196,823
Ensembl chr10:84,182,118...84,195,796
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G |
Hoxb4 |
homeo box B4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96176|MGI:96183|MGI:96184|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96190 (MGI:1859107|PMID:10885747), (MGI:74948|PMID:7628700), (MGI:85074|PMID:9012503) |
RGD |
PMID:7628700 PMID:9012503 PMID:10885747, PMID:21873635 |
MGI:1859107 MGI:74948 MGI:85074, RGD:13792537 |
NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907
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G |
Hoxb5 |
homeo box B5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2151484|MGI:96177|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96187|MGI:96188|MGI:96189|MGI:96190|MGI:96196 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847) |
RGD |
PMID:7828847 PMID:10885747 PMID:17626057, PMID:21873635 |
MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 |
NCBI chr10:84,152,152...84,154,360
Ensembl chr10:84,152,152...84,154,360
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Hoxb6 |
homeo box B6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2151485|MGI:96178|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96188|MGI:96189|MGI:96190|MGI:96197 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:70296|PMID:7828847) |
RGD |
PMID:7828847 PMID:10885747 PMID:17626057, PMID:21873635 |
MGI:1859107 MGI:3720535 MGI:70296, RGD:13792537 |
NCBI chr10:84,147,331...84,150,238
Ensembl chr10:84,147,836...84,149,600
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Hoxb7 |
homeo box B7 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150401|MGI:96179|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96189|MGI:96190 (MGI:1313067|PMID:9784603), (MGI:1859107|PMID:10885747) |
RGD |
PMID:9784603 PMID:10885747, PMID:21873635 |
MGI:1313067 MGI:1859107, RGD:13792537 |
NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
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Hoxb8 |
homeo box B8 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1934178|MGI:2683089|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96190|MGI:96198|MGI:96209 (MGI:1349283|PMID:10559485), (MGI:1859107|PMID:10885747), (MGI:1933164|PMID:11311170), (MGI:2681074|PMID:14623233) |
Ensembl RGD |
PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 |
GO_REF:0000107 MGI:1349283 MGI:1859107 MGI:1933164 MGI:2681074 |
NCBI chr10:84,131,484...84,133,874
Ensembl chr10:84,131,495...84,133,246
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G |
Hoxb9 |
homeo box B9 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2150429|MGI:96180|MGI:96182|MGI:96183|MGI:96184|MGI:96185|MGI:96186|MGI:96187|MGI:96188|MGI:96189|MGI:96199|MGI:96210 (MGI:1859107|PMID:10885747), (MGI:3720535|PMID:17626057), (MGI:85243|PMID:9013929) |
RGD |
PMID:9013929 PMID:10885747 PMID:17626057, PMID:21873635 |
MGI:1859107 MGI:3720535 MGI:85243, RGD:13792537 |
NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390
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G |
Hoxc10 |
homeo box C10 |
acts_upstream_of_or_within |
ISO |
MGI:96171|MGI:96202 (MGI:2667742|PMID:12869760) |
RGD |
PMID:12869760 |
MGI:2667742 |
NCBI chr 7:144,577,578...144,582,802
Ensembl chr 7:144,577,465...144,582,622
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G |
Hoxc11 |
homeobox C11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96203 (MGI:2667742|PMID:12869760) |
RGD |
PMID:12869760 |
MGI:2667742 |
NCBI chr 7:144,565,392...144,568,580
Ensembl chr 7:144,565,392...144,567,580
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|
G |
Hoxc13 |
homeobox C13 |
acts_upstream_of_or_within |
ISO |
MGI:1926422 (MGI:1195385|PMID:9420327) |
RGD |
PMID:9420327 |
MGI:1195385 |
NCBI chr 7:144,531,814...144,538,298
Ensembl chr 7:144,531,814...144,537,966
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G |
Hoxc4 |
homeo box C4 |
involved_in acts_upstream_of_or_within |
IBA ISO IEA |
PMID:21873635 MGI:1857570|MGI:2150683 (MGI:79121|PMID:8626021), (MGI:81673|PMID:8660891) GO_REF:0000107 |
RGD Ensembl |
PMID:8626021 PMID:8660891, PMID:21873635 |
GO_REF:0000107 MGI:79121 MGI:81673, RGD:13792537 |
NCBI chr 7:144,646,605...144,652,589
Ensembl chr 7:144,647,587...144,650,129
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G |
Hoxc5 |
homeo box C5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96177|MGI:96186 (MGI:3720535|PMID:17626057) |
RGD |
PMID:17626057, PMID:21873635 |
MGI:3720535, RGD:13792537 |
NCBI chr 7:144,628,120...144,631,542
Ensembl chr 7:144,628,120...144,631,542
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G |
Hoxc6 |
homeo box C6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:96178|MGI:96187 (MGI:3720535|PMID:17626057) |
RGD |
PMID:17626057, PMID:21873635 |
MGI:3720535, RGD:13792537 |
NCBI chr 7:144,612,230...144,626,036
Ensembl chr 7:144,623,555...144,625,516
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|
G |
Hoxc8 |
homeobox C8 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2149030|MGI:96189|MGI:96209 (MGI:1933164|PMID:11311170) |
Ensembl RGD |
PMID:11311170 |
GO_REF:0000107 MGI:1933164 |
NCBI chr 7:144,605,072...144,607,639
Ensembl chr 7:144,605,058...144,608,538
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|
G |
Hoxc9 |
homeobox C9 |
acts_upstream_of_or_within |
ISO |
MGI:2150685|MGI:96180|MGI:96190|MGI:96210 (MGI:3720535|PMID:17626057), (MGI:73980|PMID:7547473) |
RGD |
PMID:7547473 PMID:17626057 |
MGI:3720535 MGI:73980 |
NCBI chr 7:144,592,462...144,598,807
Ensembl chr 7:144,595,960...144,598,632
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Hoxd10 |
homeo box D10 |
acts_upstream_of_or_within |
ISO |
MGI:96171|MGI:96192|MGI:96210 (MGI:1350864|PMID:10642795), (MGI:2667742|PMID:12869760) |
RGD |
PMID:10642795 PMID:12869760 |
MGI:1350864 MGI:2667742 |
NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
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G |
Hoxd11 |
homeobox D11 |
acts_upstream_of_or_within |
ISO |
MGI:96172|MGI:96193 (MGI:2667742|PMID:12869760) |
RGD |
PMID:12869760 |
MGI:2667742 |
NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
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G |
Hoxd13 |
homeo box D13 |
acts_upstream_of_or_within |
ISO |
MGI:1857871 (MGI:63627|PMID:8106170) |
RGD |
PMID:8106170 |
MGI:63627 |
NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
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G |
Hoxd3 |
homeo box D3 |
involved_in acts_upstream_of_or_within |
IBA ISO IEA |
PMID:21873635 MGI:1857959|MGI:96175|MGI:96184 (MGI:1195045|PMID:9441667), (MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519) GO_REF:0000107 |
RGD Ensembl |
PMID:7910549 PMID:7913519 PMID:9441667, PMID:21873635 |
GO_REF:0000107 MGI:1195045 MGI:63793 MGI:67616, RGD:13792537 |
NCBI chr 3:61,650,569...61,670,285
Ensembl chr 3:61,658,245...61,670,282
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Hoxd4 |
homeo box D4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2151488|MGI:96176 (MGI:72992|PMID:7750651), (MGI:74948|PMID:7628700) |
RGD |
PMID:7628700 PMID:7750651, PMID:21873635 |
MGI:72992 MGI:74948, RGD:13792537 |
NCBI chr 3:61,634,005...61,653,581
Ensembl chr 3:61,634,005...61,651,056
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G |
Hoxd8 |
homeobox D8 |
acts_upstream_of_or_within |
ISO |
MGI:2151815|MGI:96189|MGI:96198 (MGI:1933164|PMID:11311170) |
RGD |
PMID:11311170 |
MGI:1933164 |
NCBI chr 3:61,627,329...61,629,743
Ensembl chr 3:61,627,383...61,628,628
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G |
Hoxd9 |
homeo box D9 |
involved_in acts_upstream_of_or_within |
IBA ISO IEA |
PMID:21873635 MGI:2150414|MGI:96180|MGI:96190|MGI:96199|MGI:96202 (MGI:1350864|PMID:10642795), (MGI:3720535|PMID:17626057), (MGI:78984|PMID:8625797) GO_REF:0000107 |
RGD Ensembl |
PMID:8625797 PMID:10642795 PMID:17626057, PMID:21873635 |
GO_REF:0000107 MGI:1350864 MGI:3720535 MGI:78984, RGD:13792537 |
NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
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Htt |
huntingtin |
acts_upstream_of_or_within |
ISO |
MGI:1857180 (MGI:3609520|PMID:16109169) |
RGD |
PMID:16109169 |
MGI:3609520 |
NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
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Ifitm1 |
interferon induced transmembrane protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3578569|PMID:15857914) |
RGD |
PMID:15857914 |
MGI:3578569 |
NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815
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Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:2157527|MGI:3027342 (MGI:2660994|PMID:12701101), (MGI:3579954|PMID:15930098) |
RGD |
PMID:12701101 PMID:15930098 |
MGI:2660994 MGI:3579954 |
NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
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Kif3a |
kinesin family member 3a |
acts_upstream_of_or_within |
ISO |
MGI:1861960 (MGI:1336552|PMID:10220415) |
RGD |
PMID:10220415 |
MGI:1336552 |
NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785
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Kmt2a |
lysine methyltransferase 2A |
acts_upstream_of_or_within |
ISO |
MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:3625774|PMID:16618927) |
RGD |
PMID:15741318 PMID:16618927 |
MGI:3530206 MGI:3625774 |
NCBI chr 8:49,110,407...49,185,872
Ensembl chr 8:49,114,990...49,158,971
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Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1347476 (MGI:1344734|PMID:10498685) |
UniProt RGD |
PMID:10498685 |
GO_REF:0000024 MGI:1344734 |
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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LOC100911511 |
homeobox protein Hox-A6-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
Ensembl chr 4:82,173,293...82,263,302
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G |
LOC102554748 |
nidogen-2-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
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G |
LOC103692128 |
homeobox protein Hox-A9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:82,277,599...82,284,820
Ensembl chr 4:82,192,963...82,194,927 Ensembl chr 4:82,192,963...82,194,927
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Lrp5 |
LDL receptor related protein 5 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1298218 (MGI:3045836|PMID:15142971) |
RGD |
PMID:15142971, PMID:21873635 |
MGI:3045836, RGD:13792537 |
NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:1278315|MGI:1861309|MGI:2156191 (MGI:3045836|PMID:15142971), (MGI:3603992|PMID:16126904), (MGI:4413372|PMID:19795512) |
RGD |
PMID:15142971 PMID:16126904 PMID:19795512 |
MGI:3045836 MGI:3603992 MGI:4413372 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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Mllt3 |
MLLT3, super elongation complex subunit |
acts_upstream_of_or_within |
ISO |
MGI:2388982 (MGI:2387913|PMID:12242306) |
RGD |
PMID:12242306 |
MGI:2387913 |
NCBI chr 5:106,103,498...106,202,559
Ensembl chr 5:106,103,407...106,207,126
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G |
Msx1 |
msh homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:97169 (MGI:4948979|PMID:21465616) |
RGD |
PMID:21465616 |
MGI:4948979 |
NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
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G |
Msx2 |
msh homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97168 (MGI:4948979|PMID:21465616) |
Ensembl RGD |
PMID:21465616 |
GO_REF:0000107 MGI:4948979 |
NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
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|
G |
Neurod1 |
neuronal differentiation 1 |
acts_upstream_of_or_within |
ISO |
MGI:2148229 (MGI:3613103|PMID:16368089) |
RGD |
PMID:16368089 |
MGI:3613103 |
NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
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|
G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:106676|MGI:2158732|MGI:2180793|MGI:2656539|MGI:3056345 (MGI:2136068|PMID:11418863), (MGI:2155575|PMID:11311163), (MGI:3042338|PMID:15004567), (MGI:3056019|PMID:15302604), (MGI:3624254|PMID:16496285) |
RGD |
PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 |
MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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|
G |
Nr2f2 |
nuclear receptor subfamily 2, group F, member 2 |
acts_upstream_of_or_within |
ISO |
MGI:3579117|MGI:3579118 (MGI:3578605|PMID:15829524) |
RGD |
PMID:15829524 |
MGI:3578605 |
NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
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G |
Otx1 |
orthodenticle homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97451 (MGI:3039992|PMID:15105370) |
Ensembl RGD |
PMID:15105370 |
GO_REF:0000107 MGI:3039992 |
NCBI chr14:106,861,556...106,864,933
Ensembl chr14:106,861,676...106,864,892
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:109448|MGI:1857502|MGI:2661067 (MGI:1197794|PMID:9501024), (MGI:2136711|PMID:11412024), (MGI:2656991|PMID:12652306) |
RGD |
PMID:9501024 PMID:11412024 PMID:12652306 |
MGI:1197794 MGI:2136711 MGI:2656991 |
NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691 Ensembl chr15:25,502,019...25,505,691
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G |
Pax6 |
paired box 6 |
acts_upstream_of_or_within |
ISO |
MGI:1856155|MGI:95388 (MGI:2386059|PMID:12196586), (MGI:3578670|PMID:15917450) |
RGD |
PMID:12196586 PMID:15917450 |
MGI:2386059 MGI:3578670 |
NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
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|
G |
Pbx1 |
PBX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:2155612 (MGI:2151355|PMID:11566859) |
RGD |
PMID:11566859 |
MGI:2151355 |
NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
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G |
Pcgf2 |
polycomb group ring finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857633|MGI:1932339 (MGI:3530206|PMID:15741318), (MGI:80640|PMID:8625838) |
RGD |
PMID:8625838 PMID:15741318 |
MGI:3530206 MGI:80640 |
NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
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Pcsk5 |
proprotein convertase subtilisin/kexin type 5 |
involved_in |
ISO |
(PMID:18519639) (MGI:3795695|PMID:18519639) |
RGD |
PMID:18519639 |
MGI:3795695 |
NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858
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Pds5a |
PDS5 cohesin associated factor A |
acts_upstream_of_or_within |
ISO |
MGI:3847257 (MGI:3847057|PMID:19412548) |
RGD |
PMID:19412548 |
MGI:3847057 |
NCBI chr14:44,185,445...44,282,308
Ensembl chr14:44,185,446...44,280,079
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Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:1931079|MGI:88360 (MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780) |
RGD |
PMID:8388780 PMID:11784046 |
MGI:2154839 MGI:60925 |
NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
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Ring1 |
ring finger protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:1926913|MGI:99150 (MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538) |
RGD |
PMID:11060235 PMID:16624538 |
MGI:1926247 MGI:3628673 |
NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834
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Scmh1 |
Scm polycomb group protein homolog 1 |
acts_upstream_of_or_within |
ISO |
MGI:3706668 (MGI:3703453|PMID:17215307) |
RGD |
PMID:17215307 |
MGI:3703453 |
NCBI chr 5:139,379,256...139,466,805
Ensembl chr 5:139,385,429...139,466,081
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Sf3b1 |
splicing factor 3b, subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:96995|MGI:99161 (MGI:3530206|PMID:15741318) |
RGD |
PMID:15741318 |
MGI:3530206 |
NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
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Sfrp1 |
secreted frizzled-related protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:108078 (MGI:3618960|PMID:16467359) |
RGD |
PMID:16467359 |
MGI:3618960 |
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
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Sfrp2 |
secreted frizzled-related protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:892014 (MGI:3618960|PMID:16467359) |
RGD |
PMID:16467359 |
MGI:3618960 |
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
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Shh |
sonic hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1857796 (MGI:1928592|PMID:11118883) MGI:1934261|MGI:2387802 (MGI:2135419|PMID:11389830) |
RGD |
PMID:11118883 PMID:11389830 |
MGI:1928592 MGI:2135419 |
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
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Smad2 |
SMAD family member 2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857691|MGI:2668416 (MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863), (MGI:2667288|PMID:12842913) |
UniProt RGD |
PMID:9529255 PMID:11418863 PMID:12842913 |
GO_REF:0000024 MGI:1201281 MGI:2136068 MGI:2667288 |
NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
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Smad4 |
SMAD family member 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857691|MGI:2656539|MGI:2668393 (MGI:3051711|PMID:15215210) |
RGD |
PMID:15215210 |
MGI:3051711 |
NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
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Smo |
smoothened, frizzled class receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2176256|MGI:2450929 (MGI:5438143|PMID:22987639) |
Ensembl RGD |
PMID:22987639 |
GO_REF:0000107 MGI:5438143 |
NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
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G |
Tbx1 |
T-box transcription factor 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:104686|MGI:2179191 (MGI:3039048|PMID:15084464), (MGI:3614586|PMID:16399080) |
UniProt RGD |
PMID:15084464 PMID:16399080 |
GO_REF:0000024 MGI:3039048 MGI:3614586 |
NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
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Tbxt |
T-box transcription factor T |
acts_upstream_of_or_within |
ISO |
MGI:3042261|MGI:3042262|MGI:3042264 (MGI:3056222|PMID:15384171) |
RGD |
PMID:15384171 |
MGI:3056222 |
NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
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Tcf15 |
transcription factor 15 |
acts_upstream_of_or_within |
ISO |
MGI:1929775 (MGI:84545|PMID:8955271) |
RGD |
PMID:8955271 |
MGI:84545 |
NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
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Tdgf1 |
teratocarcinoma-derived growth factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232
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Tgfbr1 |
transforming growth factor, beta receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:87912 (MGI:3695190|PMID:16845371) |
RGD |
PMID:16845371 |
MGI:3695190 |
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
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Tshz1 |
teashirt zinc finger homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3721421 (MGI:3720547|PMID:17586487) |
RGD |
PMID:17586487 |
MGI:3720547 |
NCBI chr18:80,860,995...80,907,744
Ensembl chr18:80,862,372...80,865,584
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Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2388066 (MGI:3844764|PMID:19334287) |
RGD |
PMID:19334287 |
MGI:3844764 |
NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
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G |
Vangl2 |
VANGL planar cell polarity protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857642 (MGI:3835694|PMID:18849982) |
RGD |
PMID:18849982 |
MGI:3835694 |
NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
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G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2178826 (MGI:1341483|PMID:10431240) |
RGD |
PMID:10431240 |
MGI:1341483 |
NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
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G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
(MGI:3044441|PMID:15148409) |
RGD |
PMID:15148409 |
MGI:3044441 |
NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
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Wnt5a |
Wnt family member 5A |
acts_upstream_of_or_within |
ISO |
MGI:1857617 (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) |
RGD |
PMID:15073149 PMID:19795512 |
MGI:3039991 MGI:4413372 |
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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Yy1 |
YY1 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1101770|MGI:2445451 (MGI:3628673|PMID:16624538) |
RGD |
PMID:16624538 |
MGI:3628673 |
NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
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Zbtb16 |
zinc finger and BTB domain containing 16 |
acts_upstream_of_or_within |
ISO |
MGI:2182708 (MGI:1859075|PMID:10835630) |
RGD |
PMID:10835630 |
MGI:1859075 |
NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
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G |
Zic3 |
Zic family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:97359 (MGI:3624254|PMID:16496285) |
RGD |
PMID:16496285 |
MGI:3624254 |
NCBI chr X:140,875,191...140,888,344
Ensembl chr X:140,878,216...140,888,795
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Aurka |
aurora kinase A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3836420 (MGI:5449118|PMID:22939930) |
Ensembl RGD |
PMID:22939930 |
GO_REF:0000107 MGI:5449118 |
NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
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Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104903 (MGI:1889107|PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 MGI:1889107 |
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Cdx1 |
caudal type homeo box 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490
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Cdx2 |
caudal type homeo box 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
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Cdx4 |
caudal type homeo box 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:74,165,172...74,173,758
Ensembl chr X:74,165,187...74,173,347
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Cer1 |
cerberus 1, DAN family BMP antagonist |
acts_upstream_of_or_within |
ISO |
MGI:107405|MGI:98658 (MGI:3042338|PMID:15004567), (MGI:3776330|PMID:18241853) |
RGD |
PMID:15004567 PMID:18241853 |
MGI:3042338 MGI:3776330 |
NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375
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Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148590 (MGI:1353237|PMID:10662781) |
Ensembl RGD |
PMID:10662781 |
GO_REF:0000107 MGI:1353237 |
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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G |
Ddit3 |
DNA-damage inducible transcript 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4821075|PMID:16434966) |
Ensembl RGD |
PMID:16434966 |
GO_REF:0000107 MGI:4821075 |
NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084
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Gpc3 |
glypican 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:88180 (MGI:1889107|PMID:10964473) |
Ensembl RGD |
PMID:10964473 |
GO_REF:0000107 MGI:1889107 |
NCBI chr X:139,579,268...139,947,093
Ensembl chr X:139,579,268...139,916,883
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Hey1 |
hes-related family bHLH transcription factor with YRPW motif 1 |
acts_upstream_of_or_within |
ISO |
MGI:1341884 (MGI:3530185|PMID:15680351) |
RGD |
PMID:15680351 |
MGI:3530185 |
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
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G |
Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
acts_upstream_of_or_within |
ISO |
MGI:1341800 (MGI:3530185|PMID:15680351) |
RGD |
PMID:15680351 |
MGI:3530185 |
NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
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Ldb1 |
LIM domain binding 1 |
acts_upstream_of_or_within |
ISO |
MGI:2449177 (MGI:2448170|PMID:12490556) |
RGD |
PMID:12490556 |
MGI:2448170 |
NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167
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Lefty1 |
left right determination factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1201414 (MGI:3042338|PMID:15004567) |
RGD |
PMID:15004567 |
MGI:3042338 |
NCBI chr13:99,212,778...99,217,786
Ensembl chr13:99,214,389...99,217,786
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Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2443342 (MGI:1346311|PMID:10529425) |
UniProt RGD |
PMID:10529425 |
GO_REF:0000024 MGI:1346311 |
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:2158732 (MGI:2155575|PMID:11311163) |
RGD |
PMID:11311163 |
MGI:2155575 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856621|MGI:99783 (MGI:1346311|PMID:10529425) |
RGD |
PMID:10529425 |
MGI:1346311 |
NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963
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Rnf2 |
ring finger protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2447529 (MGI:2389282|PMID:12183370) |
Ensembl RGD |
PMID:12183370 |
GO_REF:0000107 MGI:2389282 |
NCBI chr13:68,829,714...68,859,920
Ensembl chr13:68,830,620...68,858,809
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Six2 |
SIX homeobox 2 |
involved_in |
ISO |
(MGI:3794506|PMID:18321982) |
RGD |
PMID:18321982 |
MGI:3794506 |
NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
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Ski |
SKI proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (MGI:2176418|PMID:11731796) |
RGD |
PMID:11731796 |
MGI:2176418 |
NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
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Tbx18 |
T-box transcription factor 18 |
acts_upstream_of_or_within |
ISO |
MGI:3044914 (MGI:3044041|PMID:15155583) |
RGD |
PMID:15155583 |
MGI:3044041 |
NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
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G |
Tdgf1 |
teratocarcinoma-derived growth factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1201414 (MGI:3776330|PMID:18241853) |
RGD |
PMID:18241853 |
MGI:3776330 |
NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232
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Wls |
Wnt ligand secretion mediator |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4397730|PMID:19841259) |
UniProt RGD |
PMID:19841259 |
GO_REF:0000024 MGI:4397730 |
NCBI chr 2:266,315,036...266,431,220
Ensembl chr 2:266,315,036...266,432,558
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G |
Wnt3 |
Wnt family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450902 (MGI:3771246|PMID:18028899) |
RGD |
PMID:18028899 |
MGI:3771246 |
NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
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Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3580390 (MGI:3580203|PMID:15870281) |
RGD |
PMID:15870281 |
MGI:3580203 |
NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518
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Fzd5 |
frizzled class receptor 5 |
involved_in |
ISO IEA |
(PMID:9054360) GO_REF:0000107 |
RGD Ensembl |
PMID:9054360 |
GO_REF:0000107 |
NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
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Tasor |
transcription activation suppressor |
involved_in |
ISO |
(MGI:6109647|PMID:28839193) |
RGD |
PMID:28839193 |
MGI:6109647 |
NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531
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G |
Tbx3 |
T-box transcription factor 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9207801) |
UniProt RGD |
PMID:9207801 |
GO_REF:0000024 |
NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
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G |
Tcf7l1 |
transcription factor 7 like 1 |
acts_upstream_of_or_within |
ISO |
MGI:3044616 (MGI:3043490|PMID:14668413) |
RGD |
PMID:14668413 |
MGI:3043490 |
NCBI chr 4:100,492,796...100,660,401
Ensembl chr 4:100,491,798...100,660,140
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G |
Tdgf1 |
teratocarcinoma-derived growth factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1934206 (MGI:1303194|PMID:9790191) |
RGD |
PMID:9790191 |
MGI:1303194 |
NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232
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G |
Wnt5a |
Wnt family member 5A |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4835157|PMID:9054360) |
Ensembl RGD |
PMID:9054360 |
GO_REF:0000107 MGI:4835157 |
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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|
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G |
Lrp6 |
LDL receptor related protein 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:98956 (MGI:1891551|PMID:11029008) |
RGD |
PMID:11029008, PMID:21873635 |
MGI:1891551, RGD:13792537 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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Med12 |
mediator complex subunit 12 |
acts_upstream_of_or_within |
ISO |
MGI:4839484 (MGI:4839483|PMID:20630950) |
RGD |
PMID:20630950 |
MGI:4839483 |
NCBI chr X:71,174,653...71,197,812
Ensembl chr X:71,174,699...71,197,812
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|
G |
Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1298218 (MGI:1891551|PMID:11029008) |
RGD |
PMID:11029008 |
MGI:1891551 |
NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
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|
|
G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1861919 (MGI:2181244|PMID:12001066) |
Ensembl RGD |
PMID:12001066 |
GO_REF:0000107 MGI:2181244 |
NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
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G |
Dll3 |
delta like canonical Notch ligand 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857008 (MGI:2181244|PMID:12001066) |
Ensembl RGD |
PMID:12001066 |
GO_REF:0000107 MGI:2181244 |
NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
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G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:1933734 (MGI:2181244|PMID:12001066) |
RGD |
PMID:12001066 |
MGI:2181244 |
NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
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G |
Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857877 (MGI:2181244|PMID:12001066) |
RGD |
PMID:12001066 |
MGI:2181244 |
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108078|MGI:1860298 (MGI:3793375|PMID:18257070) |
Ensembl RGD |
PMID:18257070 |
GO_REF:0000107 MGI:3793375 |
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
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G |
Bmp2 |
bone morphogenetic protein 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3583785 (MGI:3611958|PMID:16314491) |
Ensembl RGD |
PMID:16314491 |
GO_REF:0000107 MGI:3611958 |
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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G |
Foxh1 |
forkhead box H1 |
acts_upstream_of_or_within |
ISO |
MGI:2179442 (MGI:3055632|PMID:15363409) |
RGD |
PMID:15363409 |
MGI:3055632 |
NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
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G |
Gata4 |
GATA binding protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:2386265 (MGI:87488|PMID:9136932) |
RGD |
PMID:9136932 |
MGI:87488 |
NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
(MGI:2677178|PMID:14511481) |
RGD |
PMID:14511481 |
MGI:2677178 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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G |
Nog |
noggin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:8582276) |
Ensembl RGD |
PMID:8582276 |
GO_REF:0000107 |
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
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G |
Fezf1 |
Fez family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:1859823 (MGI:3702790|PMID:16971467) |
RGD |
PMID:16971467 |
MGI:3702790 |
NCBI chr 4:50,309,281...50,312,608
Ensembl chr 4:50,309,281...50,312,608
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G |
Fezf2 |
Fez family zinc finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:1920441 (MGI:3702790|PMID:16971467) |
RGD |
PMID:16971467 |
MGI:3702790 |
NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
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G |
Six3 |
SIX homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:2450901|MGI:98953 (MGI:3772426|PMID:18094027) |
RGD |
PMID:18094027 |
MGI:3772426 |
NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925
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G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:102764 (MGI:3772426|PMID:18094027) |
RGD |
PMID:18094027 |
MGI:3772426 |
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856155|MGI:1856158 (MGI:892757|PMID:9169845) |
Ensembl RGD |
PMID:9169845 |
GO_REF:0000107 MGI:892757 |
NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
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G |
Ctnnb1 |
catenin beta 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2148567|MGI:2148569 (MGI:4360856|PMID:19686689), (MGI:4361775|PMID:19805295) |
Ensembl RGD |
PMID:19686689 PMID:19805295 |
GO_REF:0000107 MGI:4360856 MGI:4361775 |
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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G |
Wnt2 |
Wnt family member 2 |
acts_upstream_of_or_within |
ISO |
MGI:1261834 (MGI:4360856|PMID:19686689) |
RGD |
PMID:19686689 |
MGI:4360856 |
NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
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G |
Wnt2b |
Wnt family member 2B |
acts_upstream_of_or_within |
ISO |
MGI:98954 (MGI:4360856|PMID:19686689) |
RGD |
PMID:19686689 |
MGI:4360856 |
NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
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G |
En1 |
engrailed homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857163 (MGI:3525936|PMID:15607945) |
RGD |
PMID:15607945 |
MGI:3525936 |
NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
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G |
Fgf8 |
fibroblast growth factor 8 |
acts_upstream_of_or_within |
ISO |
MGI:2150347 (MGI:3720541|PMID:17601531) |
RGD |
PMID:17601531 |
MGI:3720541 |
NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
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G |
Gbx2 |
gastrulation brain homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857634 (MGI:3624192|PMID:16651541) |
RGD |
PMID:16651541 |
MGI:3624192 |
NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
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G |
Lrp6 |
LDL receptor related protein 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2156191 (MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512) |
RGD |
PMID:11029008 PMID:19795512, PMID:21873635 |
MGI:1891551 MGI:4413372, RGD:13792537 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857490 (MGI:59176|PMID:2205396) |
RGD |
PMID:2205396 |
MGI:59176 |
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
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G |
Ssbp3 |
single stranded DNA binding protein 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3578570|PMID:15857913) |
Ensembl RGD |
PMID:15857913 |
GO_REF:0000107 MGI:3578570 |
NCBI chr 5:126,511,339...126,649,830
Ensembl chr 5:126,511,350...126,648,661
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G |
Wnt1 |
Wnt family member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856382 (MGI:76584|PMID:8555108) |
RGD |
PMID:8555108 |
MGI:76584 |
NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
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G |
Gbx2 |
gastrulation brain homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857634 (MGI:3624192|PMID:16651541) |
RGD |
PMID:16651541 |
MGI:3624192 |
NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
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G |
Hes1 |
hes family bHLH transcription factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:104877 (MGI:2149154|PMID:11500373) |
Ensembl RGD |
PMID:11500373 |
GO_REF:0000107 MGI:2149154 |
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
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G |
Hes3 |
hes family bHLH transcription factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:104853 (MGI:2149134|PMID:11522634) |
RGD |
PMID:11522634 |
MGI:2149134 |
NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153
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G |
Kdm2b |
lysine demethylase 2B |
involved_in |
ISO |
(MGI:4949568|PMID:21220025) |
RGD |
PMID:21220025 |
MGI:4949568 |
NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
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G |
Tbx18 |
T-box transcription factor 18 |
involved_in |
ISO |
(MGI:3722519|PMID:17584735) |
RGD |
PMID:17584735 |
MGI:3722519 |
NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
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G |
Fuz |
fuzzy planar cell polarity protein |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5498583|PMID:23806618) |
UniProt RGD |
PMID:23806618 |
GO_REF:0000024 MGI:5498583 |
NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
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G |
Ofd1 |
OFD1, centriole and centriolar satellite protein |
involved_in |
ISO |
(MGI:5498583|PMID:23806618) |
RGD |
PMID:23806618 |
MGI:5498583 |
NCBI chr X:29,562,165...29,602,934
Ensembl chr X:29,562,165...29,602,925
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G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5545944|PMID:23072809) |
UniProt RGD |
PMID:23072809 |
GO_REF:0000024 MGI:5545944 |
NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
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G |
Nrarp |
Notch-regulated ankyrin repeat protein |
acts_upstream_of_or_within |
ISO |
MGI:5317888 (MGI:5317364|PMID:21795391) |
RGD |
PMID:21795391 |
MGI:5317364 |
NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689
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G |
Celsr2 |
cadherin, EGF LAG seven-pass G-type receptor 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3765258|PMID:12755329) |
Ensembl RGD |
PMID:12755329 |
GO_REF:0000107 MGI:3765258 |
NCBI chr 2:211,183,410...211,207,458
Ensembl chr 2:211,183,311...211,207,465
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G |
Pld6 |
phospholipase D family, member 6 |
involved_in |
ISO |
(MGI:4943609|PMID:21397848) |
RGD |
PMID:21397848 |
MGI:4943609 |
NCBI chr10:46,142,313...46,145,774
Ensembl chr10:46,142,801...46,145,548
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G |
Tdrd5 |
tudor domain containing 5 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:4946318|PMID:21383078) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21383078 |
GO_REF:0000024 GO_REF:0000107 MGI:4946318 |
NCBI chr13:73,872,637...73,922,640
Ensembl chr13:73,872,621...73,921,969
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5559673|PMID:11044396) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11044396 |
GO_REF:0000024 GO_REF:0000107 MGI:5559673 |
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
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G |
Wnt8a |
Wnt family member 8A |
acts_upstream_of_or_within |
ISO |
(MGI:3609071|PMID:16256739) |
RGD |
PMID:16256739 |
MGI:3609071 |
NCBI chr18:27,331,236...27,336,829
Ensembl chr18:27,331,236...27,336,829
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G |
Wdr77 |
WD repeat domain 77 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:208,577,292...208,587,263
Ensembl chr 2:208,420,309...208,587,260 Ensembl chr 2:208,420,309...208,587,260
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G |
Ets2 |
ETS proto-oncogene 2, transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1891557 (MGI:5546318|PMID:23552073) |
RGD |
PMID:23552073 |
MGI:5546318 |
NCBI chr11:36,075,709...36,092,495
Ensembl chr11:36,075,709...36,092,495
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G |
Foxa2 |
forkhead box A2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857725 (MGI:2157654|PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 MGI:2157654 |
NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
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G |
Gdf3 |
growth differentiation factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:3612535 (MGI:3611720|PMID:16368929) |
RGD |
PMID:16368929 |
MGI:3611720 |
NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998
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G |
Hhex |
hematopoietically expressed homeobox |
acts_upstream_of_or_within |
ISO |
MGI:4999724|MGI:97359 (MGI:4950786|PMID:21445260) |
RGD |
PMID:21445260 |
MGI:4950786 |
NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
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G |
Lhx1 |
LIM homeobox 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857502|MGI:1857848 (MGI:2157654|PMID:11291865) |
UniProt RGD |
PMID:11291865 |
GO_REF:0000024 MGI:2157654 |
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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G |
Lrp6 |
LDL receptor related protein 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:98958 (MGI:4413372|PMID:19795512) |
RGD |
PMID:19795512, PMID:21873635 |
MGI:4413372, RGD:13792537 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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G |
Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
MGI:96086 (MGI:4950786|PMID:21445260) |
RGD |
PMID:21445260 |
MGI:4950786 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857502 (MGI:2157654|PMID:11291865) |
RGD |
PMID:11291865 |
MGI:2157654 |
NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691 Ensembl chr15:25,502,019...25,505,691
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G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:2158696 (MGI:1312998|PMID:9799237) |
RGD |
PMID:9799237 |
MGI:1312998 |
NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1298218 (MGI:4413372|PMID:19795512) |
Ensembl RGD |
PMID:19795512 |
GO_REF:0000107 MGI:4413372 |
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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G |
Ppp2r3a |
protein phosphatase 2, regulatory subunit B'', alpha |
involved_in |
ISO |
UniProtKB:F6T226 (PMID:15687260) |
RGD |
PMID:15687260 |
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NCBI chr 8:109,481,352...109,621,462
Ensembl chr 8:109,482,614...109,621,408
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G |
Nog |
noggin |
involved_in |
ISO IEA |
(PMID:8582276) GO_REF:0000107 |
RGD Ensembl |
PMID:8582276 |
GO_REF:0000107 |
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
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G |
Cdx1 |
caudal type homeo box 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5301472|PMID:22015720) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:22015720 |
GO_REF:0000024 GO_REF:0000107 MGI:5301472 |
NCBI chr18:56,337,485...56,355,477
Ensembl chr18:56,338,336...56,355,490
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G |
Cdx2 |
caudal type homeo box 2 |
involved_in |
ISO |
(MGI:5301472|PMID:22015720) |
RGD |
PMID:22015720 |
MGI:5301472 |
NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5689216|PMID:26114479) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:26114479 |
GO_REF:0000024 GO_REF:0000107 MGI:5689216 |
NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
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G |
Dmrt2 |
doublesex and mab-3 related transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3512139|MGI:97487 (MGI:3820487|PMID:17974128) |
RGD |
PMID:17974128 |
MGI:3820487 |
NCBI chr 1:243,662,819...243,669,312
Ensembl chr 1:243,662,823...243,669,312
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G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:19061953) MGI:1933734 (MGI:4367298|PMID:19779553) |
RGD |
PMID:19061953 PMID:19779553 |
MGI:4367298 |
NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
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G |
Notch1 |
notch receptor 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857230 (MGI:72973|PMID:7789282) |
RGD |
PMID:7789282 |
MGI:72973 |
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
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G |
Pax3 |
paired box 3 |
acts_upstream_of_or_within |
ISO |
MGI:1330307|MGI:1856173 (MGI:3820487|PMID:17974128) |
RGD |
PMID:17974128 |
MGI:3820487 |
NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
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G |
Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:1100864|MGI:1857891 (MGI:3578715|PMID:15889094) |
RGD |
PMID:15889094 |
MGI:3578715 |
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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G |
Atp6ap2 |
ATPase H+ transporting accessory protein 2 |
involved_in |
ISO |
(PMID:20093472) |
RGD |
PMID:20093472 |
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NCBI chr X:11,137,889...11,164,854
Ensembl chr X:11,136,939...11,164,915
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G |
Bmi1 |
BMI1 proto-oncogene, polycomb ring finger |
acts_upstream_of_or_within |
ISO |
MGI:1857632 (MGI:82985|PMID:8887324) |
RGD |
PMID:8887324 |
MGI:82985 |
NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
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Sox17 |
SRY-box transcription factor 17 |
acts_upstream_of_or_within |
ISO |
MGI:2179440 (MGI:4421275|PMID:19913509) |
RGD |
PMID:19913509 |
MGI:4421275 |
NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3822451 (MGI:3821807|PMID:18794329) |
RGD |
PMID:18794329 |
MGI:3821807 |
NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
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Foxa2 |
forkhead box A2 |
acts_upstream_of_or_within |
ISO |
MGI:1857725 (MGI:2157654|PMID:11291865) |
RGD |
PMID:11291865 |
MGI:2157654 |
NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
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Gdf3 |
growth differentiation factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:3612535 (MGI:3611720|PMID:16368929) |
RGD |
PMID:16368929 |
MGI:3611720 |
NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998
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Kdm6a |
lysine demethylase 6A |
acts_upstream_of_or_within |
ISO |
MGI:5448825 (MGI:5448135|PMID:22949634) |
RGD |
PMID:22949634 |
MGI:5448135 |
NCBI chr X:4,805,493...4,945,788
Ensembl chr X:4,806,277...4,945,944
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Lhx1 |
LIM homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857502|MGI:1857848 (MGI:2157654|PMID:11291865) |
RGD |
PMID:11291865 |
MGI:2157654 |
NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
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Mesp1 |
mesoderm posterior bHLH transcription factor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
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Mesp2 |
mesoderm posterior bHLH transcription factor 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:3580268 (MGI:4459001|PMID:20346937) |
RGD |
PMID:20346937, PMID:21873635 |
MGI:4459001, RGD:13792537 |
NCBI chr 1:141,550,633...141,553,239
Ensembl chr 1:141,550,633...141,553,230
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Nrarp |
Notch-regulated ankyrin repeat protein |
acts_upstream_of_or_within |
ISO |
MGI:5438570 (MGI:5438472|PMID:21998026) |
RGD |
PMID:21998026 |
MGI:5438472 |
NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689
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Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857502 (MGI:2157654|PMID:11291865) |
RGD |
PMID:11291865 |
MGI:2157654 |
NCBI chr15:25,500,037...25,511,619
Ensembl chr15:25,502,019...25,505,691 Ensembl chr15:25,502,019...25,505,691
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Ripply1 |
ripply transcriptional repressor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2685968 (MGI:4459001|PMID:20346937) |
RGD |
PMID:20346937 |
MGI:4459001 |
NCBI chr X:111,099,420...111,114,835
Ensembl chr X:111,099,930...111,102,464
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G |
Ripply2 |
ripply transcriptional repressor 2 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:3614797 (MGI:4459001|PMID:20346937) (MGI:3613215|PMID:16326386) |
RGD |
PMID:16326386 PMID:20346937 |
MGI:3613215 MGI:4459001 |
NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041
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Smad4 |
SMAD family member 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1858049 (MGI:1195384|PMID:9420335) |
Ensembl RGD |
PMID:9420335 |
GO_REF:0000107 MGI:1195384 |
NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
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Tbx6 |
T-box transcription factor 6 |
acts_upstream_of_or_within |
ISO |
(MGI:4459001|PMID:20346937) |
RGD |
PMID:20346937 |
MGI:4459001 |
NCBI chr 1:198,214,797...198,218,706
Ensembl chr 1:198,214,797...198,218,706
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Tmed2 |
transmembrane p24 trafficking protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:4456438 (MGI:4453264|PMID:20178780) |
RGD |
PMID:20178780 |
MGI:4453264 |
NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
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Cobl |
cordon-bleu WH2 repeat protein |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:7586755) |
Ensembl RGD |
PMID:7586755 |
GO_REF:0000107 |
NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936
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Dll1 |
delta like canonical Notch ligand 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3038950 (MGI:3034157|PMID:14960495) |
Ensembl RGD |
PMID:14960495 |
GO_REF:0000107 MGI:3034157 |
NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
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G |
Meox1 |
mesenchyme homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:103219 (MGI:2669571|PMID:12925591) |
RGD |
PMID:12925591 |
MGI:2669571 |
NCBI chr10:89,797,011...89,817,009
Ensembl chr10:89,797,038...89,816,491
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G |
Meox2 |
mesenchyme homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:103220 (MGI:2669571|PMID:12925591) |
Ensembl RGD |
PMID:12925591 |
GO_REF:0000107 MGI:2669571 |
NCBI chr 6:56,625,768...56,689,195
Ensembl chr 6:56,625,650...56,689,238
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Abi1 |
abl-interactor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3578145 (MGI:3577662|PMID:15755804) |
Ensembl RGD |
PMID:15755804 |
GO_REF:0000107 MGI:3577662 |
NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328
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Atm |
ATM serine/threonine kinase |
acts_upstream_of_or_within |
ISO |
MGI:104779 (MGI:3624894|PMID:16687486) |
RGD |
PMID:16687486 |
MGI:3624894 |
NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
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Axin2 |
axin 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3037351|PMID:12636920) |
Ensembl RGD |
PMID:12636920 |
GO_REF:0000107 MGI:3037351 |
NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
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G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
acts_upstream_of_or_within |
ISO |
MGI:2158343 (MGI:3702797|PMID:16943278) |
RGD |
PMID:16943278 |
MGI:3702797 |
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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G |
Crb2 |
crumbs cell polarity complex component 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5296388|PMID:22072575) |
UniProt RGD |
PMID:22072575 |
GO_REF:0000024 MGI:5296388 |
NCBI chr 3:22,037,812...22,061,247
Ensembl chr 3:22,038,357...22,058,871
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1096325 (MGI:3578712|PMID:15902259) (MGI:5545944|PMID:23072809) |
UniProt RGD |
PMID:15902259 PMID:23072809 |
GO_REF:0000024 MGI:3578712 MGI:5545944 |
NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
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G |
Dll3 |
delta like canonical Notch ligand 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857008 (MGI:1095777|PMID:9272948), (MGI:3620337|PMID:15170697) |
Ensembl RGD |
PMID:9272948 PMID:15170697 |
GO_REF:0000107 MGI:1095777 MGI:3620337 |
NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
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Ep300 |
E1A binding protein p300 |
acts_upstream_of_or_within |
ISO |
MGI:1343101 (MGI:3583034|PMID:15937931) |
RGD |
PMID:15937931 |
MGI:3583034 |
NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3822451 (MGI:3821807|PMID:18794329) |
RGD |
PMID:18794329 |
MGI:3821807 |
NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
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G |
Foxb1 |
forkhead box B1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3771770|PMID:18064677) |
UniProt RGD |
PMID:18064677 |
GO_REF:0000024 MGI:3771770 |
NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
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G |
Foxc1 |
forkhead box C1 |
involved_in |
ISO |
UniProtKB:Q61850 (MGI:2150572|PMID:11562355) |
RGD |
PMID:11562355 |
MGI:2150572 |
NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
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G |
Foxc2 |
forkhead box C2 |
involved_in |
ISO |
UniProtKB:Q61572 (MGI:2150572|PMID:11562355) |
RGD |
PMID:11562355 |
MGI:2150572 |
NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
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G |
Foxf1 |
forkhead box F1 |
acts_upstream_of_or_within |
ISO |
MGI:1929432 (MGI:1928688|PMID:11124112) |
RGD |
PMID:11124112 |
MGI:1928688 |
NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
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Hes7 |
hes family bHLH transcription factor 7 |
acts_upstream_of_or_within |
ISO |
MGI:2652222|MGI:3046536 (MGI:2152470|PMID:11641270), (MGI:3046002|PMID:15170214), (MGI:4367298|PMID:19779553) |
RGD |
PMID:11641270 PMID:15170214 PMID:19779553 |
MGI:2152470 MGI:3046002 MGI:4367298 |
NCBI chr10:55,704,485...55,710,523
Ensembl chr10:55,707,164...55,709,687
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Ifitm1 |
interferon induced transmembrane protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3578569|PMID:15857914) |
RGD |
PMID:15857914 |
MGI:3578569 |
NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815
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Kat2a |
lysine acetyltransferase 2A |
acts_upstream_of_or_within |
ISO |
MGI:1276116|MGI:3711317 (MGI:3583034|PMID:15937931), (MGI:3709911|PMID:17325035) |
RGD |
PMID:15937931 PMID:17325035 |
MGI:3583034 MGI:3709911 |
NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
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Lef1 |
lymphoid enhancer binding factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1933764|MGI:98504 (MGI:1334099|PMID:10090727), (MGI:3510574|PMID:15545629) |
Ensembl RGD |
PMID:10090727 PMID:15545629 |
GO_REF:0000107 MGI:1334099 MGI:3510574 |
NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
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G |
Lfng |
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (MGI:5545944|PMID:23072809) MGI:3775061 (MGI:3774705|PMID:18234727) |
UniProt RGD |
PMID:18234727 PMID:23072809 |
GO_REF:0000024 MGI:3774705 MGI:5545944 |
NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
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Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:98958 (MGI:4413372|PMID:19795512) |
RGD |
PMID:19795512 |
MGI:4413372 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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Med12 |
mediator complex subunit 12 |
acts_upstream_of_or_within |
ISO |
MGI:4839486 (MGI:4839544|PMID:20589884) |
RGD |
PMID:20589884 |
MGI:4839544 |
NCBI chr X:71,174,653...71,197,812
Ensembl chr X:71,174,699...71,197,812
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G |
Mesp2 |
mesoderm posterior bHLH transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:104659|MGI:3580268 (MGI:3578712|PMID:15902259) |
RGD |
PMID:15902259 |
MGI:3578712 |
NCBI chr 1:141,550,633...141,553,239
Ensembl chr 1:141,550,633...141,553,230
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G |
Mib1 |
MIB E3 ubiquitin protein ligase 1 |
acts_upstream_of_or_within |
ISO |
MGI:3603514 (MGI:3603078|PMID:16000382) |
RGD |
PMID:16000382 |
MGI:3603078 |
NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920
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G |
Msgn1 |
mesogenin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1933263 (MGI:1928575|PMID:11124811), (MGI:5545970|PMID:21750544) |
RGD |
PMID:11124811 PMID:21750544 |
MGI:1928575 MGI:5545970 |
NCBI chr 6:36,876,165...36,876,805
Ensembl chr 6:36,876,165...36,876,805
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Myf5 |
myogenic factor 5 |
acts_upstream_of_or_within |
ISO |
MGI:1857219|MGI:1857973|MGI:2449231 (MGI:1861090|PMID:10929709), (MGI:3849775|PMID:19531352), (MGI:78390|PMID:8565825) |
RGD |
PMID:8565825 PMID:10929709 PMID:19531352 |
MGI:1861090 MGI:3849775 MGI:78390 |
NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
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Myf6 |
myogenic factor 6 |
acts_upstream_of_or_within |
ISO |
MGI:1857220 (MGI:76810|PMID:7588068) |
RGD |
PMID:7588068 |
MGI:76810 |
NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
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Nckap1 |
NCK-associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3578145 (MGI:3701029|PMID:16831833) |
RGD |
PMID:16831833 |
MGI:3701029 |
NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
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Nkx3-1 |
NK3 homeobox 1 |
acts_upstream_of_or_within |
ISO |
(PMID:9621431) |
RGD |
PMID:9621431 |
|
NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
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G |
Nle1 |
notchless homolog 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176174|MGI:5553357 (MGI:5608942|PMID:24875805) |
RGD |
PMID:24875805 |
MGI:5608942 |
NCBI chr10:70,250,959...70,261,880
Ensembl chr10:70,250,959...70,259,553
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Palb2 |
partner and localizer of BRCA2 |
acts_upstream_of_or_within |
ISO |
MGI:3801303 (MGI:4459579|PMID:20484223) |
RGD |
PMID:20484223 |
MGI:4459579 |
NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520
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G |
Pax1 |
paired box 1 |
acts_upstream_of_or_within |
ISO |
MGI:3603176 (MGI:3590033|PMID:16093716) |
RGD |
PMID:16093716 |
MGI:3590033 |
NCBI chr 3:141,577,124...141,589,849
Ensembl chr 3:141,577,504...141,589,849
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Pcdh8 |
protocadherin 8 |
acts_upstream_of_or_within |
ISO |
(MGI:2451199|PMID:12591245) |
RGD |
PMID:12591245 |
MGI:2451199 |
NCBI chr15:62,196,469...62,201,498
Ensembl chr15:62,197,060...62,200,837
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Plxna2 |
plexin A2 |
acts_upstream_of_or_within |
ISO |
(PMID:19666519) |
RGD |
PMID:19666519 |
|
NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648
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|
G |
Pofut1 |
protein O-fucosyltransferase 1 |
acts_upstream_of_or_within |
ISO |
MGI:2662305 (MGI:2660984|PMID:12697902) |
RGD |
PMID:12697902 |
MGI:2660984 |
NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
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Poglut1 |
protein O-glucosyltransferase 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2137554 (MGI:1267118|PMID:9636176) |
Ensembl RGD |
PMID:9636176 |
GO_REF:0000107 MGI:1267118 |
NCBI chr11:64,761,493...64,788,210
Ensembl chr11:64,761,146...64,788,208
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|
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Prkdc |
protein kinase, DNA-activated, catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:107202 (MGI:3624894|PMID:16687486) |
RGD |
PMID:16687486 |
MGI:3624894 |
NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
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G |
Psen1 |
presenilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:109284|MGI:1930934 (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553), (MGI:87649|PMID:9153393) |
RGD |
PMID:9153393 PMID:10557208 PMID:19779553 |
MGI:1347695 MGI:4367298 MGI:87649 |
NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
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Psen2 |
presenilin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1202717 (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553) |
RGD |
PMID:10557208 PMID:19779553 |
MGI:1347695 MGI:4367298 |
NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
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Rbpj |
recombination signal binding protein for immunoglobulin kappa J region |
acts_upstream_of_or_within |
ISO |
MGI:1857411 (MGI:4367298|PMID:19779553) |
RGD |
PMID:19779553 |
MGI:4367298 |
NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
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G |
Ripply2 |
ripply transcriptional repressor 2 |
acts_upstream_of_or_within involved_in |
ISO |
MGI:3513254 (MGI:3715395|PMID:17531978) (MGI:3613215|PMID:16326386) |
RGD |
PMID:16326386 PMID:17531978 |
MGI:3613215 MGI:3715395 |
NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041
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G |
Ror2 |
receptor tyrosine kinase-like orphan receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:2183225 (MGI:3037488|PMID:14745966) |
RGD |
PMID:14745966 |
MGI:3037488 |
NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
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Sema3c |
semaphorin 3C |
acts_upstream_of_or_within |
ISO |
(PMID:19666519) |
RGD |
PMID:19666519 |
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NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:108078 (MGI:3618960|PMID:16467359), (PMID:10654605) |
RGD |
PMID:10654605 PMID:16467359 |
MGI:3618960 |
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
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Sfrp2 |
secreted frizzled-related protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:892014 (MGI:3618960|PMID:16467359) |
RGD |
PMID:16467359 |
MGI:3618960 |
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
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Smad3 |
SMAD family member 3 |
acts_upstream_of_or_within |
ISO |
MGI:108051 (MGI:3618021|PMID:15183723) |
RGD |
PMID:15183723 |
MGI:3618021 |
NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
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G |
Tbx18 |
T-box transcription factor 18 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:3044914 (MGI:3044041|PMID:15155583) |
RGD |
PMID:15155583, PMID:21873635 |
MGI:3044041, RGD:13792537 |
NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
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G |
Tbx19 |
T-box transcription factor 19 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641
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G |
Tbxt |
T-box transcription factor T |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1856158|MGI:1857760|MGI:3042264 (MGI:3056222|PMID:15384171), (MGI:3701028|PMID:16835439), (MGI:64493|PMID:8293872) |
RGD |
PMID:8293872 PMID:15384171 PMID:16835439, PMID:21873635 |
MGI:3056222 MGI:3701028 MGI:64493, RGD:13792537 |
NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
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G |
Tcap |
titin-cap |
acts_upstream_of_or_within |
ISO |
(PMID:9817758) |
RGD |
PMID:9817758 |
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NCBI chr10:86,337,705...86,338,414
Ensembl chr10:86,337,728...86,338,411
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G |
Tcf15 |
transcription factor 15 |
acts_upstream_of_or_within |
ISO |
MGI:1929775 (MGI:84545|PMID:8955271) |
RGD |
PMID:8955271 |
MGI:84545 |
NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
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Tmed2 |
transmembrane p24 trafficking protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:4456438 (MGI:4453264|PMID:20178780) |
RGD |
PMID:20178780 |
MGI:4453264 |
NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
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Tp53 |
tumor protein p53 |
acts_upstream_of_or_within |
ISO |
MGI:1343101 (MGI:3709913|PMID:17320900) |
RGD |
PMID:17320900 |
MGI:3709913 |
NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
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G |
Ttn |
titin |
acts_upstream_of_or_within |
ISO |
(PMID:9817758) |
RGD |
PMID:9817758 |
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NCBI chr 3:63,565,160...63,837,815
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Wnt3a |
Wnt family member 3A |
acts_upstream_of_or_within |
ISO |
MGI:1857088|MGI:1857489 (MGI:3037351|PMID:12636920), (MGI:3611726|PMID:16291790), (MGI:64780|PMID:8299937) |
RGD |
PMID:8299937 PMID:12636920 PMID:16291790 |
MGI:3037351 MGI:3611726 MGI:64780 |
NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
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G |
Wnt5a |
Wnt family member 5A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1298218 (MGI:4413372|PMID:19795512) |
Ensembl RGD |
PMID:19795512 |
GO_REF:0000107 MGI:4413372 |
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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G |
Xrcc2 |
X-ray repair cross complementing 2 |
acts_upstream_of_or_within |
ISO |
MGI:1927345 (MGI:3708426|PMID:17116431) |
RGD |
PMID:17116431 |
MGI:3708426 |
NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527
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G |
Zeb2 |
zinc finger E-box binding homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2387501 (MGI:3590396|PMID:16157277), (MGI:3624924|PMID:16598713) |
RGD |
PMID:16157277 PMID:16598713 |
MGI:3590396 MGI:3624924 |
NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
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G |
Osr1 |
odd-skipped related transcription factor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3697513|PMID:16790474) |
UniProt RGD |
PMID:16790474 |
GO_REF:0000024 MGI:3697513 |
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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G |
Osr1 |
odd-skipped related transcription factor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3697513|PMID:16790474) |
UniProt RGD |
PMID:16790474 |
GO_REF:0000024 MGI:3697513 |
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:10706139), (PMID:17118062) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:10706139 PMID:17118062 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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G |
Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
MGI:2449672 (MGI:3701017|PMID:16790475) |
RGD |
PMID:16790475 |
MGI:3701017 |
NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856
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G |
Neurog1 |
neurogenin 1 |
involved_in |
ISO |
UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
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G |
Tifab |
TIFA inhibitor |
involved_in |
ISO |
UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) |
RGD |
PMID:23419067 |
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NCBI chr17:9,234,948...9,239,266
Ensembl chr17:9,236,249...9,239,265
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G |
Wt1 |
WT1 transcription factor |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:62488|PMID:8395349) |
UniProt RGD |
PMID:8395349 |
GO_REF:0000024 MGI:62488 |
NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
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Nodal |
nodal growth differentiation factor |
acts_upstream_of_or_within |
ISO |
(MGI:2677178|PMID:14511481) |
RGD |
PMID:14511481 |
MGI:2677178 |
NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
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G |
Dkk1 |
dickkopf WNT signaling pathway inhibitor 1 |
acts_upstream_of_or_within |
ISO |
MGI:108078|MGI:892014 (MGI:3793375|PMID:18257070) |
RGD |
PMID:18257070 |
MGI:3793375 |
NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607 Ensembl chr 1:248,895,738...248,898,607
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G |
Lrp6 |
LDL receptor related protein 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2673982 (MGI:3055483|PMID:15469977) |
RGD |
PMID:15469977, PMID:21873635 |
MGI:3055483, RGD:13792537 |
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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G |
Sfrp1 |
secreted frizzled-related protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:108078|MGI:1329040 (MGI:3793375|PMID:18257070) |
Ensembl RGD |
PMID:18257070 |
GO_REF:0000107 MGI:3793375 |
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
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G |
Sfrp2 |
secreted frizzled-related protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1329040|MGI:892014 (MGI:3793375|PMID:18257070) |
RGD |
PMID:18257070 |
MGI:3793375 |
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
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Shh |
sonic hedgehog signaling molecule |
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IDA |
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RGD |
PMID:25281935 |
RGD:12832757 |
NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
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G |
Nckap1 |
NCK-associated protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:3578145 (MGI:3701029|PMID:16831833) |
RGD |
PMID:16831833 |
MGI:3701029 |
NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
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G |
Pcsk6 |
proprotein convertase subtilisin/kexin type 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2181754|MGI:97359 (MGI:1858546|PMID:10809672) |
Ensembl RGD |
PMID:10809672 |
GO_REF:0000107 MGI:1858546 |
NCBI chr 1:126,749,508...126,947,392
Ensembl chr 1:126,749,508...126,947,392
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