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Gene: Hoxd3 (homeo box D3) Rattus norvegicus
Symbol: Hoxd3
Name: homeo box D3
Description: Predicted to have DNA-binding transcription factor activity and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in several processes, including nervous system development; skeletal system development; and thyroid gland development. Predicted to localize to the aggresome and nuclear body. Orthologous to human HOXD3 (homeobox D3); INTERACTS WITH ammonium chloride; bis(2-ethylhexyl) phthalate; Butylbenzyl phthalate.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: homeo box D3 (mapped); Homeobox gene D3; homeobox protein Hox-D3; homeobox protein R6; Hox4r6; Hoxd3_mapped
Homo sapiens (human) : HOXD3 (homeobox D3)  HGNC  Alliance
Mus musculus (house mouse) : Hoxd3 (homeobox D3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd3 (homeobox D3)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD3 (homeobox D3)
Canis lupus familiaris (dog) : HOXD3 (homeobox D3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxd3 (homeobox D3)
Sus scrofa (pig) : HOXD3 (homeobox D3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.0361,650,569 - 61,670,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl361,658,245 - 61,670,282 (+)Ensembl
Rnor_5.0368,119,385 - 68,135,819 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4357,358,585 - 57,361,651 (+)NCBIRGSC3.4rn4RGSC3.4
Celera359,160,179 - 59,171,694 (+)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Hoxd3
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588601
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.