Hoxd10 (homeo box D10) - Rat Genome Database

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Gene: Hoxd10 (homeo box D10) Rattus norvegicus
Analyze
Symbol: Hoxd10
Name: homeo box D10
RGD ID: 1306511
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including limb morphogenesis; neuron differentiation; and regionalization. Predicted to be located in cytoplasmic ribonucleoprotein granule; cytosol; and nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in congenital vertical talus. Orthologous to human HOXD10 (homeobox D10); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: homeobox protein Hox-D10; LOC303991
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8380,001,947 - 80,005,156 (+)NCBIGRCr8
mRatBN7.2359,594,516 - 59,597,725 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl359,594,516 - 59,597,725 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx362,981,799 - 62,985,002 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0371,565,442 - 71,568,647 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0369,330,514 - 69,333,715 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0361,614,133 - 61,617,342 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl361,613,774 - 61,617,367 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0368,080,469 - 68,083,678 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4357,306,064 - 57,309,273 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1357,202,503 - 57,205,646 (+)NCBI
Celera359,116,330 - 59,119,539 (+)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Abnormalities of vertebral formation and Hox expression in congenital kyphoscoliotic rats. Seki T, etal., Mol Cell Biochem. 2008 May;312(1-2):193-9. doi: 10.1007/s11010-008-9734-4. Epub 2008 Mar 9.
Additional References at PubMed
PMID:1756725   PMID:9409668   PMID:10642795   PMID:11432851   PMID:12869760   PMID:16672333   PMID:18065432   PMID:23760953   PMID:26699387   PMID:33307856  


Genomics

Comparative Map Data
Hoxd10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8380,001,947 - 80,005,156 (+)NCBIGRCr8
mRatBN7.2359,594,516 - 59,597,725 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl359,594,516 - 59,597,725 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx362,981,799 - 62,985,002 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0371,565,442 - 71,568,647 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0369,330,514 - 69,333,715 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0361,614,133 - 61,617,342 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl361,613,774 - 61,617,367 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0368,080,469 - 68,083,678 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4357,306,064 - 57,309,273 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1357,202,503 - 57,205,646 (+)NCBI
Celera359,116,330 - 59,119,539 (+)NCBICelera
Cytogenetic Map3q23NCBI
HOXD10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382176,116,778 - 176,119,937 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2176,108,790 - 176,119,937 (+)EnsemblGRCh38hg38GRCh38
GRCh372176,981,506 - 176,984,665 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362176,689,738 - 176,692,916 (+)NCBINCBI36Build 36hg18NCBI36
Build 342176,807,006 - 176,809,933NCBI
Celera2170,590,637 - 170,593,821 (+)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2168,858,717 - 168,861,901 (+)NCBIHuRef
CHM1_12176,987,360 - 176,990,538 (+)NCBICHM1_1
T2T-CHM13v2.02176,604,906 - 176,608,071 (+)NCBIT2T-CHM13v2.0
Hoxd10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39274,514,617 - 74,525,450 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl274,522,268 - 74,525,449 (+)EnsemblGRCm39 Ensembl
GRCm38274,684,273 - 74,695,106 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl274,691,924 - 74,695,105 (+)EnsemblGRCm38mm10GRCm38
MGSCv37274,530,005 - 74,533,159 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36274,492,809 - 74,495,942 (+)NCBIMGSCv36mm8
Celera276,362,069 - 76,365,223 (+)NCBICelera
Cytogenetic Map2C3NCBI
cM Map244.13NCBI
Hoxd10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540320,543,224 - 20,548,801 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540320,543,224 - 20,548,801 (-)NCBIChiLan1.0ChiLan1.0
HOXD10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21378,783,405 - 78,787,446 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B78,799,277 - 78,802,442 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B63,395,636 - 63,399,704 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B181,104,876 - 181,108,942 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B181,104,876 - 181,110,963 (+)Ensemblpanpan1.1panPan2
HOXD10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13619,924,352 - 19,927,706 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3619,916,175 - 19,927,724 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3619,934,317 - 19,937,598 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03620,065,513 - 20,068,794 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3620,065,309 - 20,068,808 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13620,139,724 - 20,143,005 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03620,140,432 - 20,143,713 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03620,252,251 - 20,255,532 (+)NCBIUU_Cfam_GSD_1.0
Hoxd10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303137,048,837 - 137,053,185 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365095,603,642 - 5,606,850 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365095,603,661 - 5,606,850 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HOXD10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1581,917,637 - 81,921,461 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11581,911,372 - 81,921,164 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21591,377,674 - 91,393,538 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HOXD10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11061,686,868 - 61,694,965 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1061,691,797 - 61,694,415 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040137,915,507 - 137,919,932 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hoxd10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478713,257,387 - 13,262,685 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478713,256,600 - 13,260,664 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:110
Count of miRNA genes:71
Interacting mature miRNAs:97
Transcripts:ENSRNOT00000002148
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)373592611110333156Rat
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331795Rf30Renal function QTL 303.708urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)35986366387321459Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1331777Bw24Body weight QTL 243.503body mass (VT:0001259)body weight (CMO:0000012)35986366387321459Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1300169Bp177Blood pressure QTL 1772.96arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)33642511681425116Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)33779691982796919Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
2302276Bw82Body weight QTL 824.32body mass (VT:0001259)body weight (CMO:0000012)35986366383358329Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
1582249Bw77Body weight QTL 773.20.0025epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)37359251285062403Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)33870893183708931Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)33736373482363734Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)33610140381101403Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat

Markers in Region
RH130068  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2359,597,392 - 59,597,583 (+)MAPPERmRatBN7.2
Rnor_6.0361,617,010 - 61,617,200NCBIRnor6.0
Rnor_5.0368,083,346 - 68,083,536UniSTSRnor5.0
RGSC_v3.4357,308,941 - 57,309,131UniSTSRGSC3.4
Celera359,119,207 - 59,119,397UniSTS
Cytogenetic Map3q23UniSTS
AI385591  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2359,597,084 - 59,597,191 (+)MAPPERmRatBN7.2
Rnor_6.0361,616,702 - 61,616,808NCBIRnor6.0
Rnor_5.0368,083,038 - 68,083,144UniSTSRnor5.0
RGSC_v3.4357,308,633 - 57,308,739UniSTSRGSC3.4
Celera359,118,899 - 59,119,005UniSTS
Cytogenetic Map3q23UniSTS
Hoxd9  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2359,596,750 - 59,596,964 (+)MAPPERmRatBN7.2
Rnor_6.0361,616,368 - 61,616,581NCBIRnor6.0
Rnor_5.0368,082,704 - 68,082,917UniSTSRnor5.0
RGSC_v3.4357,308,299 - 57,308,512UniSTSRGSC3.4
Celera359,118,565 - 59,118,778UniSTS
Cytogenetic Map3q23UniSTS
GDB:192883  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2359,597,184 - 59,597,275 (+)MAPPERmRatBN7.2
Rnor_6.0361,616,802 - 61,616,892NCBIRnor6.0
Rnor_5.0368,083,138 - 68,083,228UniSTSRnor5.0
RGSC_v3.4357,308,733 - 57,308,823UniSTSRGSC3.4
Celera359,118,999 - 59,119,089UniSTS
Cytogenetic Map3q23UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
8 10 5 22 26 25 12 3 12 6 94 21 10 45 57 13

Sequence


Ensembl Acc Id: ENSRNOT00000002148   ⟹   ENSRNOP00000002148
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl359,594,516 - 59,597,725 (+)Ensembl
Rnor_6.0 Ensembl361,613,774 - 61,617,367 (+)Ensembl
RefSeq Acc Id: NM_001107094   ⟹   NP_001100564
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8380,001,947 - 80,005,156 (+)NCBI
mRatBN7.2359,594,516 - 59,597,725 (+)NCBI
Rnor_6.0361,614,133 - 61,617,342 (+)NCBI
Rnor_5.0368,080,469 - 68,083,678 (+)NCBI
RGSC_v3.4357,306,064 - 57,309,273 (+)RGD
Celera359,116,330 - 59,119,539 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001100564 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL79181 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000002148.5
RefSeq Acc Id: NP_001100564   ⟸   NM_001107094
- UniProtKB: D4ACD8 (UniProtKB/TrEMBL),   A6HMD0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000002148   ⟸   ENSRNOT00000002148
Protein Domains
Homeobox

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ACD8-F1-model_v2 AlphaFold D4ACD8 1-410 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306511 AgrOrtholog
BioCyc Gene G2FUF-49332 BioCyc
Ensembl Genes ENSRNOG00000001581 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000002148.6 UniProtKB/TrEMBL
Gene3D-CATH Homeodomain-like UniProtKB/TrEMBL
InterPro Homeobox UniProtKB/TrEMBL
  Homeobox_CS UniProtKB/TrEMBL
  Homeobox_region UniProtKB/TrEMBL
  Homeodomain-like UniProtKB/TrEMBL
  HXA10/ABDB-like UniProtKB/TrEMBL
KEGG Report rno:303991 UniProtKB/TrEMBL
NCBI Gene 303991 ENTREZGENE
PANTHER HOMEOBOX PROTEIN HOX-D10 UniProtKB/TrEMBL
  PTHR45874 UniProtKB/TrEMBL
Pfam Homeobox UniProtKB/TrEMBL
PhenoGen Hoxd10 PhenoGen
PRINTS HOMEOBOX UniProtKB/TrEMBL
PROSITE HOMEOBOX_1 UniProtKB/TrEMBL
  HOMEOBOX_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000001581 RatGTEx
SMART HOX UniProtKB/TrEMBL
Superfamily-SCOP Homeodomain_like UniProtKB/TrEMBL
UniProt A6HMD0 ENTREZGENE, UniProtKB/TrEMBL
  D4ACD8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Hoxd10  homeo box D10   Hoxd10_predicted  homeo box D10 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Hoxd10_predicted  homeo box D10 (predicted)      Symbol and Name status set to approved 70820 APPROVED