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ONTOLOGY REPORT - ANNOTATIONS

Term:RNA polymerase II-specific DNA-binding transcription factor binding
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Accession:GO:0061629 term browser browse the term
Definition:Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription.
Synonyms:exact_synonym: RNA polymerase II sequence-specific DNA binding transcription factor binding
 related_synonym: RNA polymerase II activating transcription factor binding;   RNA polymerase II repressing transcription factor binding;   RNA polymerase II transcription factor binding
 alt_id: GO:0001085;   GO:0001102;   GO:0001103


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RNA polymerase II-specific DNA-binding transcription factor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034438.1 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr11:68,398,182...68,460,080 JBrowse link
G Add1 adducin 1 enables ISO UniProtKB:P22670 (PMID:16289097) RGD PMID:16289097 NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182 		JBrowse link
G Ahr aryl hydrocarbon receptor enables ISO
IEA		 UniProtKB:O00327 (PMID:9079689)
GO_REF:0000107		 RGD
Ensembl		 PMID:9079689 GO_REF:0000107 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Ank3 ankyrin 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 enables ISO
IBA
IEA		 UniProtKB:O08750|UniProtKB:O35738|UniProtKB:P05627|UniProtKB:P09021|UniProtKB:P09450|UniProtKB:P15314|UniProtKB:P28574|UniProtKB:P70662|UniProtKB:Q61039|UniProtKB:Q61179|UniProtKB:Q61827|UniProtKB:Q9WV93|UniProtKB:Q9Z0S2|UniProtKB:Q9Z2D6 (PMID:20599664)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20599664 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919 		JBrowse link
G Ankrd2 ankyrin repeat domain 2 enables ISO
IBA		 (PMID:24434510)
GO_REF:0000033		 RGD
GO_Central		 PMID:24434510 GO_REF:0000033 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566 		JBrowse link
G Ar androgen receptor enables IEA
ISO		 GO_REF:0000107
UniProtKB:O75593|UniProtKB:Q9NQB0 (PMID:12799378), (PMID:16120611)		 Ensembl
RGD		 PMID:12799378 PMID:16120611 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO UniProtKB:Q16665|UniProtKB:Q99814|UniProtKB:Q9UBP5|UniProtKB:Q9Y5J3 (PMID:10692439), (PMID:7539918), (PMID:9079689) RGD PMID:7539918 PMID:9079689 PMID:10692439 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO
IEA		 UniProtKB:P05412|UniProtKB:P16220 (PMID:19861239)
GO_REF:0000107		 RGD
Ensembl		 PMID:19861239 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atf4 activating transcription factor 4 enables ISO UniProtKB:P35638 (PMID:11478948) RGD PMID:11478948 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 3:54,410,429...54,431,831
Ensembl chr 3:54,410,775...54,431,829 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Bex2 brain expressed X-linked 2 enables ISO UniProtKB:P25791 (PMID:16314316) RGD PMID:16314316 NCBI chr  X:99,019,847...99,021,375
Ensembl chr  X:99,019,000...99,021,503 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables ISO
IEA		 (MGI:5306297|PMID:17487425)
GO_REF:0000107		 RGD
Ensembl		 PMID:17487425 GO_REF:0000107 MGI:5306297 NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables ISO
IEA		 UniProtKB:O89090 (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425)
GO_REF:0000107		 RGD
Ensembl		 PMID:12657651 PMID:17487425 GO_REF:0000107 MGI:5297791 MGI:5306297 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Cd34 CD34 molecule enables ISO UniProtKB:Q01196 (PMID:21873977) RGD PMID:21873977 NCBI chr13:106,480,313...106,500,844
Ensembl chr13:106,480,043...106,499,832 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A enables ISO UniProtKB:P18146 (PMID:19057511) RGD PMID:19057511 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables ISO UniProtKB:P17947 (PMID:24429361) RGD PMID:24429361 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables IPI PMID:1547942 ParkinsonsUK-UCL PMID:1547942 RGD:10047202 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 enables ISO UniProtKB:Q96BF6 (PMID:22926524) RGD PMID:22926524 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 enables ISO PR:P34056|PR:Q61312|PR:Q61313|UniProtKB:P49698 (MGI:3813432|PMID:17932483), (PMID:11694877) RGD PMID:11694877 PMID:17932483 MGI:3813432 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO UniProtKB:P15336 (PMID:19861239) RGD PMID:19861239 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Crebbp CREB binding protein enables IEA
ISO		 GO_REF:0000107
PR:Q01147|UniProtKB:P10071 (MGI:4441151|PMID:10075717), (PMID:7913207)
UniProtKB:O43474|UniProtKB:O96004|UniProtKB:Q02078 (PMID:16043483), (PMID:21539536)		 Ensembl
RGD		 PMID:7913207 PMID:10075717 PMID:16043483 PMID:21539536 GO_REF:0000107 MGI:4441151 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein enables ISO (PMID:29581031) RGD PMID:29581031 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Csnk2b casein kinase 2 beta enables ISO
IEA		 UniProtKB:Q03014 (PMID:19324893)
GO_REF:0000107		 RGD
Ensembl		 PMID:19324893 GO_REF:0000107 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Csrp3 cysteine and glycine rich protein 3 enables IPI PMID:9234731 MGI PMID:9234731 PMID:9234731 PMID:9234731 RGD:10047266, RGD:10047266, RGD:10047266 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653 		JBrowse link
G Ctbp1 C-terminal binding protein 1 enables ISO
IEA		 UniProtKB:P58462|UniProtKB:P58463 (MGI:3606794|PMID:14701752)
GO_REF:0000107		 RGD
Ensembl		 PMID:14701752 GO_REF:0000107 MGI:3606794 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821 		JBrowse link
G Ctnnb1 catenin beta 1 enables ISS
ISO		 GO_REF:0000024
(PMID:16678101), (PMID:22665494)
UniProtKB:O43524|UniProtKB:Q9NQB0|UniProtKB:Q9UJU2 (PMID:12651860), (PMID:15905404), (PMID:18193033), (PMID:18579517), (PMID:18936100), (PMID:19443654)		 UniProt
RGD		 PMID:12651860 PMID:15905404 PMID:16678101 PMID:18193033 PMID:18579517 More... GO_REF:0000024 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 enables ISO UniProtKB:Q9UJU2 (PMID:18936100) RGD PMID:18936100 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906 		JBrowse link
G Daxx death-domain associated protein enables ISO
ISS		 (PMID:10698492)
GO_REF:0000024		 RGD
UniProt		 PMID:10698492 GO_REF:0000024 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO
IEA		 UniProtKB:Q01978|UniProtKB:Q9NQB0 (PMID:16434966)
GO_REF:0000107
UniProtKB:P01100|UniProtKB:P15066|UniProtKB:P21272 (MGI:5616331|PMID:10523647), (MGI:85669|PMID:1547942)		 RGD
Ensembl		 PMID:1547942 PMID:10523647 PMID:16434966 GO_REF:0000107 MGI:5616331 MGI:85669 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 enables ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO UniProtKB:Q8VI67 (PMID:17303075) RGD PMID:17303075 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 enables ISO (PMID:15367675) RGD PMID:15367675 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 enables ISO UniProtKB:P40763|UniProtKB:P42224 (PMID:16531398) RGD PMID:16531398 NCBI chr10:10,854,732...10,880,171
Ensembl chr10:10,854,732...10,880,161 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO UniProtKB:P01106 (PMID:19786833) RGD PMID:19786833 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase enables ISO UniProtKB:P42224 (PMID:22002246) RGD PMID:22002246 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Dusp26 dual specificity phosphatase 26 enables ISO UniProtKB:Q9ULV5-1 (PMID:16581800) RGD PMID:16581800 NCBI chr16:61,041,784...61,049,319
Ensembl chr16:61,041,792...61,049,051 		JBrowse link
G E4f1 E4F transcription factor 1 enables ISO UniProtKB:P52926 (PMID:14645522) RGD PMID:14645522 NCBI chr10:13,471,478...13,495,018
Ensembl chr10:13,474,456...13,485,974 		JBrowse link
G Egr2 early growth response 2 enables ISO UniProtKB:Q60793 (MGI:4887558|PMID:18396140) RGD PMID:18396140 MGI:4887558 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Elk1 ETS transcription factor ELK1 enables ISO UniProtKB:P28069 (PMID:26612202) RGD PMID:26612202 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Eomes eomesodermin enables ISO UniProtKB:Q9WUI0 (MGI:5448510|PMID:22164283) RGD PMID:22164283 MGI:5448510 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Ep300 E1A binding protein p300 enables IPI
ISO		 PMID:10362258
PR:Q07243 (PMID:18605988)
UniProtKB:P18146|UniProtKB:P19838-PRO_0000030311|UniProtKB:Q04206|UniProtKB:Q96BR9 (PMID:20018936), (PMID:23329847), (PMID:23811396)		 RGD PMID:18605988 PMID:20018936 PMID:23329847 PMID:23811396 PMID:10362258 RGD:13506263 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Epas1 endothelial PAS domain protein 1 enables ISO
IEA		 UniProtKB:P27540 (PMID:9079689)
GO_REF:0000107		 RGD
Ensembl		 PMID:9079689 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228 		JBrowse link
G Esrrb estrogen-related receptor beta enables ISO UniProtKB:P20263 (MGI:3813404|PMID:18662995) RGD PMID:18662995 MGI:3813404 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO
IEA		 UniProtKB:P23497-1|UniProtKB:P23497-2|UniProtKB:P23497-3|UniProtKB:P23497-4 (PMID:11909962)
GO_REF:0000107		 RGD
Ensembl		 PMID:11909962 GO_REF:0000107 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO UniProtKB:P23497-2 (PMID:11909962) RGD PMID:11909962 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319 		JBrowse link
G Exosc9 exosome component 9 IPI RGD PMID:9148967 RGD:10755760 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 enables ISO
IEA		 (PMID:25043030)
GO_REF:0000107		 RGD
Ensembl		 PMID:25043030 GO_REF:0000107 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables ISO UniProtKB:P05412 (PMID:10508860) RGD PMID:10508860 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Foxa1 forkhead box A1 enables IPI PMID:17220277 ARUK-UCL PMID:17220277 RGD:8554147 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxc1 forkhead box C1 enables ISO UniProtKB:Q99697-3 (PMID:16449236) RGD PMID:16449236 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO UniProtKB:P17433 (MGI:3773481|PMID:18063754)
UniProtKB:Q8IX07 (PMID:11675338), (PMID:15920471)		 RGD PMID:11675338 PMID:15920471 PMID:18063754 MGI:3773481 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gata2 GATA binding protein 2 enables ISO UniProtKB:Q03014 (PMID:15016828) RGD PMID:15016828 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gata3 GATA binding protein 3 enables ISO UniProtKB:Q03014 (PMID:15016828) RGD PMID:15016828 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO
IPI		 UniProtKB:P52952|UniProtKB:P97471 (PMID:21330551), (PMID:9858576)
PMID:11994297		 RGD PMID:9858576 PMID:21330551 PMID:11994297 RGD:727369 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO UniProtKB:Q9UBP5 (MGI:3610837|PMID:16293227) RGD PMID:16293227 MGI:3610837 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 enables ISO (PMID:23144817) RGD PMID:23144817 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gfi1b growth factor independent 1B transcriptional repressor enables ISO UniProtKB:Q8IX07 (PMID:15920471) RGD PMID:15920471 NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942 		JBrowse link
G Gsc goosecoid homeobox enables ISO UniProtKB:P20293|UniProtKB:P70324|UniProtKB:P70327|UniProtKB:Q9ES03 (MGI:5448510|PMID:22164283) RGD PMID:22164283 MGI:5448510 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta enables ISO UniProtKB:Q92908 (PMID:20864106) RGD PMID:20864106 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Gtf2a1 general transcription factor 2A subunit 1 enables ISO PR:Q8BIA3 (PMID:19235719) RGD PMID:19235719 NCBI chr 6:110,488,891...110,521,502
Ensembl chr 6:110,488,931...110,521,511 		JBrowse link
G Gtf2a2 general transcription factor 2A subunit 2 enables ISO PR:Q8BIA3 (PMID:19235719) RGD PMID:19235719 NCBI chr 8:70,662,447...70,675,576
Ensembl chr 8:70,662,428...70,675,569 		JBrowse link
G Gtf2i general transcription factor II I enables ISO
IEA		 UniProtKB:P54821 (PMID:9334314)
GO_REF:0000107		 RGD
Ensembl		 PMID:9334314 GO_REF:0000107 NCBI chr12:22,400,933...22,476,243
Ensembl chr12:22,401,431...22,476,243 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 enables ISO UniProtKB:Q02078|UniProtKB:Q06413|UniProtKB:Q14814 (PMID:16043483) RGD PMID:16043483 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 enables ISO
IPI
IEA		 UniProtKB:P15806-1 (MGI:4362015|PMID:11812799)
PMID:11994297
GO_REF:0000107		 RGD
Ensembl		 PMID:11812799 PMID:11994297 GO_REF:0000107 MGI:4362015, RGD:727369 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hcls1 hematopoietic cell specific Lyn substrate 1 enables ISO UniProtKB:Q9UJU2 (PMID:23001182) RGD PMID:23001182 NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO UniProtKB:P08047|UniProtKB:Q96BF6|UniProtKB:Q9UJU2 (PMID:18850004), (PMID:18936100), (PMID:22926524)
PR:Q8BIA3 (PMID:19235719)		 RGD PMID:18850004 PMID:18936100 PMID:19235719 PMID:22926524 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO UniProtKB:P08047|UniProtKB:Q02086|UniProtKB:Q96BF6 (PMID:17827154), (PMID:22926524) RGD PMID:17827154 PMID:22926524 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hdac4 histone deacetylase 4 enables ISO UniProtKB:P08047|UniProtKB:Q61221|UniProtKB:Q9NP62 (PMID:18850004), (PMID:19071119), (PMID:23867755) RGD PMID:18850004 PMID:19071119 PMID:23867755 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 enables ISO UniProtKB:Q64104 (MGI:4461095|PMID:20123967)
UniProtKB:O35426-2|UniProtKB:Q61221|UniProtKB:Q9NP62 (PMID:19071119), (PMID:20408817), (PMID:23867755)		 RGD PMID:19071119 PMID:20123967 PMID:20408817 PMID:23867755 MGI:4461095 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hdac9 histone deacetylase 9 enables ISO UniProtKB:P22415|UniProtKB:Q02080 (PMID:11535832), (PMID:15567413), (PMID:19303849) RGD PMID:11535832 PMID:15567413 PMID:19303849 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables ISO
IEA		 UniProtKB:Q9JHE6 (MGI:1859234|PMID:10851137)
GO_REF:0000107		 RGD
Ensembl		 PMID:10851137 GO_REF:0000107 MGI:1859234 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes6 hes family bHLH transcription factor 6 enables ISO UniProtKB:P35428 (MGI:1859234|PMID:10851137) RGD PMID:10851137 MGI:1859234 NCBI chr 9:92,001,849...92,003,562
Ensembl chr 9:92,001,841...92,003,559 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 enables ISO UniProtKB:P27540 (PMID:10692439) RGD PMID:10692439 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 enables ISO
IDA		 UniProtKB:P27540|UniProtKB:Q61169 (PMID:10692439), (PMID:16293227)
PMID:16151017		 RGD PMID:10692439 PMID:16293227 PMID:16151017 RGD:8554320 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO UniProtKB:P27540 (PMID:7539918) RGD PMID:7539918 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 enables ISO UniProtKB:P63015 (MGI:5306308|PMID:16407227)
UniProtKB:P23497 (PMID:14647468)		 RGD PMID:14647468 PMID:16407227 MGI:5306308 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223 		JBrowse link
G Hira histone cell cycle regulator enables ISO UniProtKB:P24610 (PMID:9731536) RGD PMID:9731536 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO UniProtKB:Q66K89 (PMID:14645522) RGD PMID:14645522 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Hmgb1 high mobility group box 1 enables ISO UniProtKB:P25208 (PMID:19223331) RGD PMID:19223331 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha enables ISO
IEA		 UniProtKB:O35740 (MGI:3813432|PMID:17932483)
GO_REF:0000107		 RGD
Ensembl		 PMID:17932483 GO_REF:0000107 MGI:3813432 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 IPI RGD PMID:17473852 RGD:5688754 NCBI chr10:37,408,025...37,449,080
Ensembl chr10:37,408,025...37,449,001 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 enables ISO
IEA		 UniProtKB:Q9Y692 (PMID:10386584)
GO_REF:0000107		 RGD
Ensembl		 PMID:10386584 GO_REF:0000107 NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743 		JBrowse link
G Id2 inhibitor of DNA binding 2 enables ISO UniProtKB:P15923 (MGI:1934945|PMID:10652346) RGD PMID:10652346 MGI:1934945 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Id4 inhibitor of DNA binding 4 enables ISO PR:Q9QUS4 (PMID:20628571) RGD PMID:20628571 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 enables ISO UniProtKB:P22736 (PMID:22427340) RGD PMID:22427340 NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294 		JBrowse link
G Ifrd1 interferon-related developmental regulator 1 enables IPI PMID:15743821 MGI PMID:15743821 RGD:10047350 NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables ISO
IEA		 UniProtKB:Q13562 (PMID:19619559)
GO_REF:0000107		 RGD
Ensembl		 PMID:19619559 GO_REF:0000107 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO UniProtKB:P01100|UniProtKB:P15336|UniProtKB:Q9NQB0 (PMID:10508860), (PMID:16007074), (PMID:19861239) RGD PMID:10508860 PMID:16007074 PMID:19861239 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Kat8 lysine acetyltransferase 8 enables ISO
IEA		 (PMID:11965546)
GO_REF:0000107		 RGD
Ensembl		 PMID:11965546 GO_REF:0000107 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO UniProtKB:Q64104 (MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:4461095 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Kdm5c lysine demethylase 5C enables ISO (PMID:18078810) RGD PMID:18078810 NCBI chr  X:21,345,459...21,387,045
Ensembl chr  X:21,345,481...21,381,870 		JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 enables ISO
IEA		 UniProtKB:Q16236 (PMID:17015834)
GO_REF:0000107		 RGD
Ensembl		 PMID:17015834 GO_REF:0000107 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862 		JBrowse link
G Klf4 KLF transcription factor 4 enables ISO UniProtKB:Q92793 (PMID:21539536)
PR:P42227|UniProtKB:P08152 (MGI:4887558|PMID:18396140), (PMID:24129709)		 RGD PMID:18396140 PMID:21539536 PMID:24129709 MGI:4887558 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Ldb1 LIM domain binding 1 enables ISO UniProtKB:P25791 (PMID:16314316) RGD PMID:16314316 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Lhx3 LIM homeobox 3 enables ISO UniProtKB:P28069 (PMID:26612202) RGD PMID:26612202 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Lmo2 LIM domain only 2 enables ISO UniProtKB:Q02577 (PMID:16314316) RGD PMID:16314316 NCBI chr 3:90,355,234...90,377,970
Ensembl chr 3:90,365,883...90,377,953 		JBrowse link
G Lpin1 lipin 1 enables ISO (PMID:20385772) RGD PMID:20385772 NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 enables ISO UniProtKB:Q9NQB0 (PMID:19443654) RGD PMID:19443654 NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO UniProtKB:O09100|UniProtKB:P17678|UniProtKB:P17679|UniProtKB:P23772|UniProtKB:P23824|UniProtKB:P23825|UniProtKB:Q08369|UniProtKB:Q61169 (MGI:2158098|PMID:11724781) RGD PMID:11724781 MGI:2158098 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mef2a myocyte enhancer factor 2a enables ISO
IEA		 UniProtKB:O96004|UniProtKB:Q99697-3 (PMID:15466416), (PMID:16043483)
GO_REF:0000107		 RGD
Ensembl		 PMID:15466416 PMID:16043483 GO_REF:0000107 NCBI chr 1:120,847,874...120,982,488
Ensembl chr 1:120,850,080...120,981,948 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO
IEA		 UniProtKB:O96004 (PMID:16043483)
GO_REF:0000107		 RGD
Ensembl		 PMID:16043483 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mef2d myocyte enhancer factor 2D enables ISO
IEA		 UniProtKB:O96004 (PMID:16043483)
GO_REF:0000107		 RGD
Ensembl		 PMID:16043483 GO_REF:0000107 NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457 		JBrowse link
G Mixl1 Mix paired-like homeobox 1 enables ISO UniProtKB:O54839|UniProtKB:P20293|UniProtKB:P70324|UniProtKB:P70327|UniProtKB:Q9ES03 (MGI:5448510|PMID:22164283)
UniProtKB:O15178 (PMID:22164283)		 RGD PMID:22164283 MGI:5448510 NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065 		JBrowse link
G Mkks MKKS centrosomal shuttling protein enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Mkx mohawk homeobox enables ISO PR:P29037|PR:Q80ZM7|PR:Q99PM3 (PMID:19235719) RGD PMID:19235719 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124 		JBrowse link
G Mlx MAX dimerization protein MLX enables ISO UniProtKB:Q9NP71 (PMID:11230181)
(PMID:18606808)		 RGD PMID:11230181 PMID:18606808 NCBI chr10:86,019,216...86,024,326
Ensembl chr10:86,019,588...86,032,350 		JBrowse link
G Mlxipl MLX interacting protein-like enables ISO
IEA		 UniProtKB:Q9UH92 (PMID:11230181)
GO_REF:0000107
(MGI:1931895|PMID:11230181)		 RGD
Ensembl		 PMID:11230181 GO_REF:0000107 MGI:1931895 NCBI chr12:21,541,608...21,577,120
Ensembl chr12:21,543,576...21,577,112 		JBrowse link
G Mta1 metastasis associated 1 enables ISO
IEA		 UniProtKB:Q96BF6 (PMID:22926524)
GO_REF:0000107		 RGD
Ensembl		 PMID:22926524 GO_REF:0000107 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641 		JBrowse link
G Mta2 metastasis associated 1 family, member 2 enables ISO UniProtKB:Q8IX07|UniProtKB:Q96BF6 (PMID:15920471), (PMID:22926524) RGD PMID:15920471 PMID:22926524 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946 		JBrowse link
G Mtdh metadherin enables ISO UniProtKB:P16220 (PMID:18316612) RGD PMID:18316612 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413 		JBrowse link
G Myocd myocardin enables IEA
ISO		 GO_REF:0000107
UniProtKB:Q9JM73 (MGI:2136697|PMID:11439182)		 Ensembl
RGD		 PMID:11439182 GO_REF:0000107 MGI:2136697 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO UniProtKB:P15923 (MGI:1934945|PMID:10652346) RGD PMID:10652346 MGI:1934945 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 enables ISO UniProtKB:Q03181 (MGI:3688383|PMID:15001550) RGD PMID:15001550 MGI:3688383 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables ISO UniProtKB:Q07869 (PMID:19955185) RGD PMID:19955185 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Neurod1 neuronal differentiation 1 enables ISO UniProtKB:P15923|UniProtKB:P61371 (PMID:10545951), (PMID:16321656), (PMID:19619559) RGD PMID:10545951 PMID:16321656 PMID:19619559 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 enables ISO UniProtKB:P17433 (MGI:5306313|PMID:15304486) RGD PMID:15304486 MGI:5306313 NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 enables ISO UniProtKB:Q13164 (PMID:23043106) RGD PMID:23043106 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G Nhlh2 nescient helix loop helix 2 enables ISO UniProtKB:P25791 (PMID:16314316)
UniProtKB:P42227 (MGI:3795052|PMID:18356286)		 RGD PMID:16314316 PMID:18356286 MGI:3795052 NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625 		JBrowse link
G Nif3l1 NGG1 interacting factor 3 like 1 enables ISO
IEA		 UniProtKB:Q99MZ3 (PMID:15163635)
GO_REF:0000107		 RGD
Ensembl		 PMID:15163635 GO_REF:0000107 NCBI chr 9:59,980,101...60,001,490
Ensembl chr 9:59,979,799...60,000,131 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO
IEA		 UniProtKB:P23512 (PMID:17220277)
GO_REF:0000107		 RGD
Ensembl		 PMID:17220277 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nkx2-5 NK2 homeobox 5 enables ISO
IEA		 UniProtKB:P43694|UniProtKB:Q99593 (PMID:11431700), (PMID:9858576)
GO_REF:0000107		 RGD
Ensembl		 PMID:9858576 PMID:11431700 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 enables ISO UniProtKB:P22449 (PMID:19651776) RGD PMID:19651776 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 enables ISO UniProtKB:P22415 (PMID:19303849) RGD PMID:19303849 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 enables ISO
IEA		 UniProtKB:O35426-1|UniProtKB:O35426-2 (PMID:20408817)
GO_REF:0000107
UniProtKB:O35426-1|UniProtKB:O35426-2 (MGI:5616311|PMID:20408817)		 RGD
Ensembl		 PMID:20408817 GO_REF:0000107 MGI:5616311 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033 		JBrowse link
G Pitx1 paired-like homeodomain 1 enables ISO UniProtKB:P28069 (PMID:26612202) RGD PMID:26612202 NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291 		JBrowse link
G Pitx2 paired-like homeodomain 2 enables ISO UniProtKB:P28069 (PMID:9685346)
UniProtKB:P28069|UniProtKB:Q02078|UniProtKB:Q12948 (PMID:12612071), (PMID:15466416), (PMID:16449236)		 RGD PMID:9685346 PMID:12612071 PMID:15466416 PMID:16449236 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 enables ISO UniProtKB:P19419|UniProtKB:P78337|UniProtKB:Q99697|UniProtKB:Q99697-3|UniProtKB:Q9UBR4 (PMID:12612071), (PMID:26612202), (PMID:9685346) RGD PMID:9685346 PMID:12612071 PMID:26612202 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 enables ISO
IPI
IEA		 UniProtKB:O15350 (MGI:5688842|PMID:18421303)
PMID:10329733
GO_REF:0000107		 RGD
Ensembl		 PMID:18421303 PMID:10329733 GO_REF:0000107 MGI:5688842, RGD:14697712 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO UniProtKB:Q9H6I2 (PMID:19736317)
UniProtKB:Q61539 (MGI:3813404|PMID:18662995)		 RGD PMID:18662995 PMID:19736317 MGI:3813404 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha enables ISO UniProtKB:O75376 (PMID:19955185) RGD PMID:19955185 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables ISO UniProtKB:P26687 (MGI:3843109|PMID:19345188) RGD PMID:19345188 MGI:3843109 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Prdm13 PR/SET domain 13 enables ISO UniProtKB:Q02067 (MGI:5490929|PMID:23639443) RGD PMID:23639443 MGI:5490929 NCBI chr 5:35,220,815...35,232,866
Ensembl chr 5:35,225,435...35,232,881 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit enables ISO UniProtKB:P22415 (PMID:19303849) RGD PMID:19303849 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prrx1 paired related homeobox 1 enables ISO UniProtKB:P78347 (PMID:9334314) RGD PMID:9334314 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:104,656,809...104,665,122
Ensembl chr  X:104,656,812...104,665,097 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein enables ISO MGI:98364 (PMID:25901318) RGD PMID:25901318 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319 		JBrowse link
G Rb1 RB transcriptional corepressor 1 enables ISO
IEA		 UniProtKB:Q01094 (MGI:5285162|PMID:20224733)
GO_REF:0000107		 RGD
Ensembl		 PMID:20224733 GO_REF:0000107 MGI:5285162 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease enables ISO UniProtKB:Q96T58 (PMID:16287852) RGD PMID:16287852 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region enables ISO UniProtKB:Q96T58 (PMID:16287852) RGD PMID:16287852 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Rbx1 ring-box 1 enables ISO UniProtKB:P05412 (PMID:14739464) RGD PMID:14739464 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rest RE1-silencing transcription factor enables ISO
IPI
IEA		 UniProtKB:Q02447 (PMID:17130167)
GO_REF:0000107
UniProtKB:O70494 (MGI:5009400|PMID:17130167)		 RGD
Ensembl		 PMID:17130167 PMID:17130167 GO_REF:0000107 MGI:5009400, RGD:8553999 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Sall1 spalt-like transcription factor 1 enables ISO UniProtKB:P48432|UniProtKB:Q80Z64 (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 enables ISO UniProtKB:Q06330 (PMID:16691198) RGD PMID:16691198 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase enables ISO UniProtKB:P22415 (PMID:27141965) RGD PMID:27141965 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090 		JBrowse link
G Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase enables ISO PR:P10085 (PMID:21832073) RGD PMID:21832073 NCBI chr 6:127,023,058...127,090,020
Ensembl chr 6:127,023,058...127,090,008 		JBrowse link
G Sin3a SIN3 transcription regulator family member A enables ISO UniProtKB:P40763 (PMID:22783022)
PR:Q8BIA3 (PMID:19235719)		 RGD PMID:19235719 PMID:22783022 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Smad2 SMAD family member 2 enables ISO
ISS		 UniProtKB:B7ZQJ9 (MGI:4399035|PMID:11937490)
GO_REF:0000024		 RGD
UniProt		 PMID:11937490 GO_REF:0000024 MGI:4399035 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad3 SMAD family member 3 enables ISO UniProtKB:P01100|UniProtKB:P05412|UniProtKB:P26367 (PMID:17251190), (PMID:9732876)
UniProtKB:B7ZQJ9 (MGI:4399035|PMID:11937490)		 RGD PMID:9732876 PMID:11937490 PMID:17251190 MGI:4399035 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 enables ISO
IEA		 UniProtKB:P43694 (MGI:4946551|PMID:21330551)
GO_REF:0000107		 RGD
Ensembl		 PMID:21330551 GO_REF:0000107 MGI:4946551 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables ISO UniProtKB:P22415 (PMID:27141965) RGD PMID:27141965 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347 		JBrowse link
G Sox17 SRY-box transcription factor 17 enables ISO UniProtKB:Q01860-1|UniProtKB:Q9NQB0 (PMID:17875931), (PMID:19736317) RGD PMID:17875931 PMID:19736317 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO MGI:101893 (PMID:25901318) RGD PMID:25901318 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sp1 Sp1 transcription factor enables ISO UniProtKB:Q99PV5 (MGI:5297791|PMID:12657651) RGD PMID:12657651 MGI:5297791 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp100 SP100 nuclear antigen enables ISO UniProtKB:P15036 (PMID:11909962)
UniProtKB:P14921 (PMID:11909962)		 RGD PMID:11909962 NCBI chr 9:86,310,990...86,377,036
Ensembl chr 9:86,311,032...86,377,034 		JBrowse link
G Sp3 Sp3 transcription factor enables ISO
IPI		 UniProtKB:Q13127 (PMID:17130167)
UniProtKB:Q8VIG1 (MGI:5009400|PMID:17130167)		 RGD PMID:17130167 PMID:17130167 MGI:5009400, RGD:8553999 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Spen spen family transcriptional repressor enables ISO UniProtKB:Q06330 (PMID:16287852) RGD PMID:16287852 NCBI chr 5:153,775,287...153,848,677
Ensembl chr 5:153,776,234...153,848,811 		JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO UniProtKB:O88942|UniProtKB:P17679 (MGI:3773481|PMID:18063754), (MGI:5306313|PMID:15304486)
UniProtKB:P49715|UniProtKB:Q04206 (PMID:24429361), (PMID:28362429)		 RGD PMID:15304486 PMID:18063754 PMID:24429361 PMID:28362429 MGI:3773481 MGI:5306313 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Spop speckle type BTB/POZ protein enables ISO PR:Q0VGT2|PR:Q61602 (PMID:19684112) RGD PMID:19684112 NCBI chr10:80,358,121...80,438,983
Ensembl chr10:80,358,124...80,483,955 		JBrowse link
G Srf serum response factor enables ISO UniProtKB:Q8VIM5 (MGI:2136697|PMID:11439182) RGD PMID:11439182 MGI:2136697 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables ISO
IEA		 UniProtKB:P17947|UniProtKB:P37231|UniProtKB:P49715|UniProtKB:Q96ST3 (PMID:22783022), (PMID:24429361), (PMID:28467929)
GO_REF:0000107		 RGD
Ensembl		 PMID:22783022 PMID:24429361 PMID:28467929 GO_REF:0000107 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 enables ISO
IEA		 (PMID:18818105)
GO_REF:0000107		 RGD
Ensembl		 PMID:18818105 GO_REF:0000107 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335 		JBrowse link
G Stk4 serine/threonine kinase 4 enables ISO UniProtKB:O43524 (PMID:16751106) RGD PMID:16751106 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO UniProtKB:P04637 (PMID:24289924) RGD PMID:24289924 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO UniProtKB:Q8IX07 (PMID:15920471) RGD PMID:15920471 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Tbp TATA box binding protein enables ISO PR:Q8BIA3 (PMID:19235719) RGD PMID:19235719 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016 		JBrowse link
G Tbx18 T-box transcription factor 18 enables ISO UniProtKB:P42582|UniProtKB:Q08369 (MGI:3722519|PMID:17584735) RGD PMID:17584735 MGI:3722519 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058 		JBrowse link
G Tbx20 T-box transcription factor 20 enables ISO UniProtKB:P42582|UniProtKB:P97489|UniProtKB:Q02591|UniProtKB:Q08369|UniProtKB:Q9WUI0 (MGI:5284807|PMID:14550786), (MGI:5448510|PMID:22164283) RGD PMID:14550786 PMID:22164283 MGI:5284807 MGI:5448510 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tbx3 T-box transcription factor 3 enables ISO UniProtKB:Q02591|UniProtKB:Q9WUI0 (MGI:5448510|PMID:22164283) RGD PMID:22164283 MGI:5448510 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tbx5 T-box transcription factor 5 enables ISO
IEA		 UniProtKB:P52952 (PMID:11431700)
GO_REF:0000107		 RGD
Ensembl		 PMID:11431700 GO_REF:0000107 NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
G Tbx6 T-box transcription factor 6 enables ISO UniProtKB:Q02591|UniProtKB:Q9WUI0 (MGI:5448510|PMID:22164283) RGD PMID:22164283 MGI:5448510 NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593 		JBrowse link
G Tbxt T-box transcription factor T enables ISO UniProtKB:Q02591|UniProtKB:Q9WUI0 (MGI:5448510|PMID:22164283)
UniProtKB:Q9H2W2 (PMID:22164283)		 RGD PMID:22164283 MGI:5448510 NCBI chr 1:52,298,104...52,309,813
Ensembl chr 1:52,298,099...52,305,864 		JBrowse link
G Tcerg1 transcription elongation regulator 1 enables ISO UniProtKB:Q9UI36 (PMID:20956529) RGD PMID:20956529 NCBI chr18:34,505,708...34,566,470
Ensembl chr18:34,505,751...34,566,470 		JBrowse link
G Tcf23 transcription factor 23 enables ISO UniProtKB:P15923 (MGI:1934945|PMID:10652346) RGD PMID:10652346 MGI:1934945 NCBI chr 6:25,397,889...25,406,639
Ensembl chr 6:25,397,937...25,405,880 		JBrowse link
G Tcf3 transcription factor 3 enables ISO
IEA		 UniProtKB:P10085 (PMID:10652346)
UniProtKB:Q61039 (MGI:4362015|PMID:11812799)
GO_REF:0000107		 RGD
Ensembl		 PMID:10652346 PMID:11812799 GO_REF:0000107 MGI:4362015 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO UniProtKB:P05412|UniProtKB:P35638|UniProtKB:Q9H6I2|UniProtKB:Q9UI95 (PMID:16007074), (PMID:16434966), (PMID:17875931), (PMID:19443654) RGD PMID:16007074 PMID:16434966 PMID:17875931 PMID:19443654 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tead3 TEA domain transcription factor 3 enables ISO UniProtKB:G5EFY4 (PMID:23946438) RGD PMID:23946438 NCBI chr20:6,392,053...6,411,446
Ensembl chr20:6,392,053...6,411,446 		JBrowse link
G Tnni3k TNNI3 interacting kinase enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:243,737,346...244,005,319
Ensembl chr 2:243,710,950...244,005,268 		JBrowse link
G Tox2 TOX high mobility group box family member 2 IPI RGD PMID:14764631 RGD:1302820 NCBI chr 3:151,853,294...151,980,086
Ensembl chr 3:151,853,294...151,980,749 		JBrowse link
G Tp53 tumor protein p53 enables IPI
IEA
ISO		 PMID:10329733
GO_REF:0000107
UniProtKB:P28360|UniProtKB:Q01664|UniProtKB:Q5HZG4|UniProtKB:Q96BR9 (PMID:15705871), (PMID:18549481), (PMID:19505873), (PMID:23329847)		 Ensembl
RGD		 PMID:15705871 PMID:18549481 PMID:19505873 PMID:23329847 PMID:10329733 GO_REF:0000107, RGD:14697712 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO UniProtKB:P04637 (PMID:17805299) RGD PMID:17805299 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Tp73 tumor protein p73 enables ISO UniProtKB:P17208 (PMID:18421303) RGD PMID:18421303 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Trib1 tribbles pseudokinase 1 enables ISO UniProtKB:P17676 (PMID:17724128)
UniProtKB:P28033 (MGI:3760491|PMID:17724128)		 RGD PMID:17724128 MGI:3760491 NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731 		JBrowse link
G Trib2 tribbles pseudokinase 2 enables ISO (MGI:3722453|PMID:17576771) RGD PMID:17576771 MGI:3722453 NCBI chr 6:38,545,971...38,570,349
Ensembl chr 6:38,545,975...38,569,370 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 enables ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Ubxn7 UBX domain protein 7 enables ISO UniProtKB:Q16665 (PMID:18775313) RGD PMID:18775313 NCBI chr11:68,427,896...68,460,100 JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 enables ISO UniProtKB:Q5T7W0 (PMID:27129234) RGD PMID:27129234 NCBI chr 1:227,814,639...227,877,907
Ensembl chr 1:227,814,963...227,877,904 		JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 enables ISO
IBA		 UniProtKB:Q01860 (PMID:19274063)
MGI:98371|UniProtKB:P20263 (MGI:4887340|PMID:15047715), (PMID:21427722)
GO_REF:0000033		 RGD
GO_Central		 PMID:15047715 PMID:19274063 PMID:21427722 GO_REF:0000033 MGI:4887340 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699 		JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor enables ISO MGI:98364 (PMID:25901318) RGD PMID:25901318 NCBI chr 4:123,993,670...124,020,922
Ensembl chr 4:123,993,666...124,021,010 		JBrowse link
G Zbtb8a zinc finger and BTB domain containing 8a enables ISO
IEA		 UniProtKB:P04637 (PMID:23329847)
GO_REF:0000107		 RGD
Ensembl		 PMID:23329847 GO_REF:0000107 NCBI chr 5:141,693,189...141,721,464
Ensembl chr 5:141,693,189...141,721,344 		JBrowse link
G Zfpm1 zinc finger protein, multitype 1 enables ISO UniProtKB:O94776|UniProtKB:P15976|UniProtKB:P17542|UniProtKB:P23769|UniProtKB:Q5VTD9 (PMID:11675338), (PMID:12483298), (PMID:15920471)
(PMID:9230307)		 RGD PMID:9230307 PMID:11675338 PMID:12483298 PMID:15920471 NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591 		JBrowse link
G Zfpm2 zinc finger protein, multitype 2 enables ISO UniProtKB:P17679 (PMID:10438528) RGD PMID:10438528 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205 		JBrowse link
aryl hydrocarbon receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO UniProtKB:P53762 (MGI:5547895|PMID:24001774) RGD PMID:24001774 MGI:5547895 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Aip aryl-hydrocarbon receptor-interacting protein enables ISO PR:P30561 (PMID:9083006) RGD PMID:9083006 NCBI chr 1:201,408,002...201,419,220
Ensembl chr 1:201,407,288...201,419,122 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IEA
ISO		 GO_REF:0000107
UniProtKB:P35869 (PMID:9079689)		 Ensembl
RGD		 PMID:9079689 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables ISO UniProtKB:P30561 (MGI:79449|PMID:8657146) RGD PMID:8657146 MGI:79449 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISO
IEA		 UniProtKB:P35869 (PMID:9079689)
GO_REF:0000107		 RGD
Ensembl		 PMID:9079689 GO_REF:0000107 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 enables ISO
IEA		 UniProtKB:P35869 (PMID:15641800)
GO_REF:0000107		 RGD
Ensembl		 PMID:15641800 GO_REF:0000107 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 enables ISO UniProtKB:P35869 (PMID:15641800) RGD PMID:15641800 NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356 		JBrowse link
G Taf6 TATA-box binding protein associated factor 6 enables ISO
IEA		 UniProtKB:P35869 (PMID:15641800)
GO_REF:0000107		 RGD
Ensembl		 PMID:15641800 GO_REF:0000107 NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247 		JBrowse link
G Tbp TATA box binding protein enables ISO UniProtKB:P35869 (PMID:15641800) RGD PMID:15641800 NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016 		JBrowse link
NF-kappaB binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8 A-kinase anchoring protein 8 enables ISO (MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:5763364 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399 		JBrowse link
G Ankrd42 ankyrin repeat domain 42 enables IBA
ISO		 GO_REF:0000033
PR:P25799 (PMID:20547855)		 GO_Central
RGD		 PMID:20547855 GO_REF:0000033 NCBI chr 1:146,648,080...146,691,086
Ensembl chr 1:146,648,080...146,691,108 		JBrowse link
G Ankrd55 ankyrin repeat domain 55 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:43,883,877...43,983,820
Ensembl chr 2:43,883,857...43,983,680 		JBrowse link
G Anxa4 annexin A4 enables ISO
IEA		 UniProtKB:P19838|UniProtKB:P19838-PRO_0000030311 (PMID:20237821)
GO_REF:0000107		 RGD
Ensembl		 PMID:20237821 GO_REF:0000107 NCBI chr 4:119,184,378...119,241,183
Ensembl chr 4:119,184,374...119,241,161 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 IDA RGD PMID:17602955 RGD:2315672 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Bcl10 BCL10, immune signaling adaptor enables ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:16280327)		 UniProt
GO_Central
TreeGrafter
RGD		 PMID:16280327 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523 		JBrowse link
G Brms1 BRMS1, transcriptional repressor and anoikis regulator enables ISO (PMID:17000776) RGD PMID:17000776 NCBI chr 1:202,345,766...202,355,028
Ensembl chr 1:202,345,704...202,355,028 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 enables ISO
IEA		 UniProtKB:Q04206 (PMID:17785205)
GO_REF:0000107		 RGD
Ensembl		 PMID:17785205 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A enables ISO (PMID:10353611) RGD PMID:10353611 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Commd6 COMM domain containing 6 enables ISO
IBA		 UniProtKB:Q04206 (PMID:16573520)
GO_REF:0000033		 RGD
GO_Central		 PMID:16573520 GO_REF:0000033 NCBI chr15:78,467,333...78,474,382
Ensembl chr15:78,467,804...78,474,382 		JBrowse link
G Commd7 COMM domain containing 7 enables ISO
IBA		 (PMID:15799966)
GO_REF:0000033		 RGD
GO_Central		 PMID:15799966 GO_REF:0000033 NCBI chr 3:142,099,566...142,114,348
Ensembl chr 3:142,099,251...142,114,317 		JBrowse link
G Cpne1 copine 1 enables ISO
IEA		 UniProtKB:Q04206 (PMID:18212740)
GO_REF:0000107		 RGD
Ensembl		 PMID:18212740 GO_REF:0000107 NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 enables ISO UniProtKB:Q04206 (PMID:15601829) RGD PMID:15601829 NCBI chr10:10,854,732...10,880,171
Ensembl chr10:10,854,732...10,880,161 		JBrowse link
G Ep300 E1A binding protein p300 enables IPI
ISO		 UniProtKB:P19838-PRO_0000030311|UniProtKB:Q04206 (PMID:23811396) RGD PMID:23811396 PMID:17252537 RGD:2312270 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Faf1 Fas associated factor 1 enables ISO
IEA
IBA		 UniProtKB:Q04206 (PMID:14600157)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:14600157 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:124,426,032...124,790,014
Ensembl chr 5:124,426,062...124,789,977 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta enables ISO
IEA		 UniProtKB:Q04206 (PMID:15465828)
GO_REF:0000107		 RGD
Ensembl		 PMID:15465828 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO UniProtKB:Q04206 (PMID:11931769), (PMID:17785205) RGD PMID:11931769 PMID:17785205 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO UniProtKB:Q04206 (PMID:17785205) RGD PMID:17785205 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hdac3 histone deacetylase 3 enables ISO UniProtKB:Q04206 (PMID:17785205) RGD PMID:17785205 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hif1an hypoxia inducible factor 1 subunit alpha inhibitor enables ISO UniProtKB:P19838 (PMID:17003112) RGD PMID:17003112 NCBI chr 1:243,419,175...243,440,464
Ensembl chr 1:243,419,194...243,434,327 		JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B IPI RGD PMID:16135962 RGD:1598788 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
Ensembl chr20:3,856,006...3,873,240 		JBrowse link
G Mtdh metadherin enables ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
UniProtKB:Q04206 (PMID:16452207)		 UniProt
TreeGrafter
GO_Central
Ensembl
RGD		 PMID:16452207 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413 		JBrowse link
G Nfkbia NFKB inhibitor alpha enables IPI
IEA
IBA
ISO
IC		 GO_REF:0000118
GO_REF:0000033
UniProtKB:Q04206 (PMID:11931770), (PMID:7628694), (PMID:7739562), (PMID:7796813), (PMID:7878466)		 TreeGrafter
GO_Central
RGD		 PMID:7628694 PMID:7739562 PMID:7796813 PMID:7878466 PMID:11931770 More... GO_REF:0000033 GO_REF:0000118, RGD:1598788, RGD:2298917, RGD:2298880 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941 		JBrowse link
G Nfkbib NFKB inhibitor beta IC RGD PMID:16580131 RGD:2298917 NCBI chr 1:84,046,292...84,053,862
Ensembl chr 1:84,046,295...84,053,862 		JBrowse link
G Nfkbid NFKB inhibitor delta enables ISO PR:P25799 (PMID:11931770) RGD PMID:11931770 NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447 		JBrowse link
G Nfkbie NFKB inhibitor epsilon enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 9:15,443,600...15,450,437
Ensembl chr 9:15,436,941...15,450,437 		JBrowse link
G Notch2 notch receptor 2 enables IEA
ISO		 GO_REF:0000107
UniProtKB:Q04207 (MGI:3814108|PMID:18710934)		 Ensembl
RGD		 PMID:18710934 GO_REF:0000107 MGI:3814108 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Npm1 nucleophosmin 1 enables ISS
ISO		 GO_REF:0000024
(PMID:15087454)		 UniProt
RGD		 PMID:15087454 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Pdcd11 programmed cell death 11 enables ISO UniProtKB:P19838|UniProtKB:Q04206 (PMID:14624448) RGD PMID:14624448 NCBI chr 1:245,980,840...246,021,999
Ensembl chr 1:245,980,880...246,021,999 		JBrowse link
G Pias3 protein inhibitor of activated STAT, 3 enables ISO UniProtKB:Q04206 (PMID:15140884) RGD PMID:15140884 NCBI chr 2:184,232,546...184,241,455
Ensembl chr 2:184,232,571...184,241,480 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IPI RGD PMID:15728586 RGD:1580656 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 enables ISO
IEA		 UniProtKB:Q00653-2 (PMID:14743216)
GO_REF:0000107		 RGD
Ensembl		 PMID:14743216 GO_REF:0000107 NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554 		JBrowse link
G Rbm12 RNA binding motif protein 12 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:144,609,661...144,629,911
Ensembl chr 3:144,611,623...144,629,915
Ensembl chr 3:144,611,623...144,629,915 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables ISO UniProtKB:P19838|UniProtKB:Q00653 (PMID:8441377) RGD PMID:8441377 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Rnf25 ring finger protein 25 enables ISO UniProtKB:Q04206 (PMID:12748188) RGD PMID:12748188 NCBI chr 9:76,170,037...76,176,924
Ensembl chr 9:76,170,037...76,176,849 		JBrowse link
G Setd6 SET domain containing 6, protein lysine methyltransferase enables ISO UniProtKB:Q04207 (PMID:21131967) RGD PMID:21131967 NCBI chr19:9,343,309...9,350,477
Ensembl chr19:9,347,458...9,350,453 		JBrowse link
G Taf4b TATA-box binding protein associated factor 4b enables ISO UniProtKB:Q04206 (PMID:10849440) RGD PMID:10849440 NCBI chr18:5,952,737...6,086,408
Ensembl chr18:5,952,769...6,068,307 		JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 enables ISO UniProtKB:Q04206 (PMID:10498867) RGD PMID:10498867 NCBI chr13:94,088,769...94,145,436
Ensembl chr13:94,088,709...94,145,432 		JBrowse link
NFAT protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 enables ISO UniProtKB:Q13469 (PMID:16873067), (PMID:21458306) RGD PMID:16873067 PMID:21458306 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838 		JBrowse link
G Gata4 GATA binding protein 4 IPI RGD PMID:22198280 RGD:5687133 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO
IEA		 UniProtKB:O88942 (PMID:11889139)
GO_REF:0000107		 RGD
Ensembl		 PMID:11889139 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 enables IEA
ISO		 GO_REF:0000107
UniProtKB:O88942 (MGI:5306313|PMID:15304486)		 Ensembl
RGD		 PMID:15304486 GO_REF:0000107 MGI:5306313 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha IPI RGD PMID:22198280 RGD:5687133 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO UniProtKB:O88942 (MGI:5306313|PMID:15304486) RGD PMID:15304486 MGI:5306313 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
nuclear androgen receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor IPI RGD PMID:9710597 RGD:69969 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Calr calreticulin enables ISO (PMID:8107809) RGD PMID:8107809 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Daxx death-domain associated protein enables IPI
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
UniProtKB:P10275 (PMID:15572661)		 GO_Central
TreeGrafter
Ensembl
RGD		 PMID:15572661 PMID:15350595 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:1358129 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Ddx5 DEAD-box helicase 5 enables ISO (PMID:18829551) RGD PMID:18829551 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Ep300 E1A binding protein p300 enables ISO UniProtKB:P10275 (PMID:18487222) RGD PMID:18487222 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Foxh1 forkhead box H1 enables ISO UniProtKB:P10275 (PMID:16120611) RGD PMID:16120611 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:18640093) RGD PMID:18640093 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Foxp2 forkhead box P2 IPI RGD PMID:25247470 RGD:11536003 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Kdm1a lysine demethylase 1A enables ISO (PMID:16079795) RGD PMID:16079795 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Kdm3a lysine demethylase 3A enables ISO
IEA		 (PMID:16603237)
GO_REF:0000107		 RGD
Ensembl		 PMID:16603237 GO_REF:0000107 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073 		JBrowse link
G Kdm4c lysine demethylase 4C enables ISO UniProtKB:P10275 (PMID:17277772)
UniProtKB:P19091 (MGI:4943397|PMID:17277772)		 RGD PMID:17277772 MGI:4943397 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818 		JBrowse link
G Kdm5d lysine demethylase 5D enables ISO (PMID:27185910) RGD PMID:27185910 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IPI RGD PMID:17223690 RGD:5688284 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO (PMID:11509567) RGD PMID:11509567 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Park7 Parkinsonism associated deglycase enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
UniProtKB:P10275 (PMID:17510388)		 ParkinsonsUK-UCL
Ensembl
RGD		 PMID:17510388 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970 		JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 enables IPI PMID:9920921 RGD
MGI		 PMID:11117529 PMID:9920921 RGD:2303126, RGD:70792 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033 		JBrowse link
G Pkn1 protein kinase N1 enables ISO
IEA
ISS		 (PMID:12514133), (PMID:18066052)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12514133 PMID:18066052 GO_REF:0000024 GO_REF:0000107 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107 		JBrowse link
G Prkcb protein kinase C, beta enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20228790)		 UniProt
Ensembl
RGD		 PMID:20228790 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P10275 (PMID:17587566) RGD PMID:17587566 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Psmc3ip PSMC3 interacting protein IDA RGD PMID:11739747 RGD:628392 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rnf14 ring finger protein 14 enables ISO UniProtKB:P10275 (PMID:19345326) RGD PMID:19345326 NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685 		JBrowse link
G Rnf4 ring finger protein 4 IPI RGD PMID:9710597 RGD:69969 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Rnf6 ring finger protein 6 enables ISO UniProtKB:P10275 (PMID:19345326) RGD PMID:19345326 NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables ISO
IEA		 UniProtKB:P10275 (PMID:18487222)
GO_REF:0000107		 RGD
Ensembl		 PMID:18487222 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Snw1 SNW domain containing 1 enables ISO UniProtKB:P10275 (PMID:23566155) RGD PMID:23566155 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Tcf21 transcription factor 21 enables ISO UniProtKB:P19091 (MGI:3588448|PMID:15919722) RGD PMID:15919722 MGI:3588448 NCBI chr 1:22,701,353...22,704,212
Ensembl chr 1:22,701,353...22,704,202 		JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 enables ISO
IEA		 UniProtKB:P10275 (PMID:10075738)
GO_REF:0000107		 RGD
Ensembl		 PMID:10075738 GO_REF:0000107 NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080 		JBrowse link
G Tmf1 TATA element modulatory factor 1 enables ISO UniProtKB:P10275 (PMID:10428808) RGD PMID:10428808 NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629 		JBrowse link
G Trim68 tripartite motif containing 68 enables ISO UniProtKB:P10275 (PMID:18451177) RGD PMID:18451177 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 enables ISO (PMID:15602573) RGD PMID:15602573 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a enables ISS
ISO
IEA		 GO_REF:0000024
UniProtKB:P10275 (PMID:20812024)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20812024 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
nuclear estrogen receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Arrb1 arrestin, beta 1 IPI RGD PMID:19339617 RGD:5509970 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061 		JBrowse link
G Ccdc62 coiled-coil domain containing 62 enables ISO UniProtKB:P03372|UniProtKB:Q92731 (PMID:18563714), (PMID:19126643) RGD PMID:18563714 PMID:19126643 NCBI chr12:32,623,170...32,659,912
Ensembl chr12:32,623,170...32,660,017 		JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 enables ISO (PMID:16778766) RGD PMID:16778766 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Ctnnb1 catenin beta 1 enables ISO
IEA		 UniProtKB:P03372 (PMID:15304487)
GO_REF:0000107		 RGD
Ensembl		 PMID:15304487 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 enables ISO
IBA		 UniProtKB:P03372 (PMID:28068668)
GO_REF:0000033		 RGD
GO_Central		 PMID:28068668 GO_REF:0000033 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627 		JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 enables ISO UniProtKB:P03372 (PMID:28068668) RGD PMID:28068668 NCBI chr 7:70,160,983...70,196,142
Ensembl chr 7:70,160,941...70,196,142 		JBrowse link
G Ddx54 DEAD-box helicase 54 enables ISO (PMID:12466272) RGD PMID:12466272 NCBI chr12:35,934,713...35,949,956
Ensembl chr12:35,934,716...35,972,523 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 enables ISO
IBA
IEA
IDA		 (PMID:19423554)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:19423554 PMID:19423554 GO_REF:0000033 GO_REF:0000118, RGD:8553436 NCBI chr 8:73,696,394...73,711,315
Ensembl chr 8:73,698,103...73,711,292 		JBrowse link
G Dnmt1 DNA methyltransferase 1 IPI RGD PMID:19683557 RGD:8694315 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO
IEA		 UniProtKB:P03372 (PMID:9841876)
GO_REF:0000107		 RGD
Ensembl		 PMID:9841876 GO_REF:0000107 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G Foxl2 forkhead box L2 enables ISO UniProtKB:P19785 (MGI:4429740|PMID:20005806), (MGI:4430655|PMID:19797124) RGD PMID:19797124 PMID:20005806 MGI:4429740 MGI:4430655 NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427 		JBrowse link
G Fus Fus RNA binding protein IDA RGD PMID:9440806 RGD:9685715 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Grm1 glutamate metabotropic receptor 1 IPI RGD PMID:18948402 RGD:4892069 NCBI chr 1:5,058,285...5,453,170
Ensembl chr 1:5,058,292...5,453,170 		JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 IPI RGD PMID:19422801 RGD:4890964 NCBI chr  X:21,089,142...21,091,603
Ensembl chr  X:21,089,122...21,109,488 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IDA PMID:11043578 BHF-UCL
RGD		 PMID:11043578 PMID:11043578 RGD:8554127, RGD:8554127 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Lats1 large tumor suppressor kinase 1 enables ISO UniProtKB:P03372 (PMID:28068668) RGD PMID:28068668 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lcor ligand dependent nuclear receptor corepressor enables ISO UniProtKB:P03372 (PMID:12535528) RGD PMID:12535528 NCBI chr 1:240,298,565...240,405,627
Ensembl chr 1:240,298,563...240,402,448 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO
IEA		 (PMID:18794125)
GO_REF:0000107		 RGD
Ensembl		 PMID:18794125 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO UniProtKB:P03372 (PMID:9653119) RGD PMID:9653119 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component enables ISO UniProtKB:P03372|UniProtKB:Q92731 (PMID:11279242) RGD PMID:11279242 NCBI chr 1:240,757,279...240,794,291
Ensembl chr 1:240,757,282...240,794,288 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 enables IPI
ISO		 UniProtKB:P03372 (PMID:18563714) RGD PMID:18563714 PMID:19460436 PMID:19460436 RGD:5688174, RGD:5688174 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI RGD PMID:20678994 PMID:20678994 RGD:5688148, RGD:5688148 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IPI RGD PMID:11818503 RGD:634396 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IPI RGD PMID:10866662 RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IPI RGD PMID:19460436 PMID:19460436 RGD:5688174, RGD:5688174 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nkx3-1 NK3 homeobox 1 enables ISO (PMID:18794125) RGD PMID:18794125 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 enables IPI
IBA
ISO		 GO_REF:0000033
UniProtKB:P03372 (PMID:7641693)		 GO_Central
RGD		 PMID:7641693 PMID:19460436 PMID:19460436 GO_REF:0000033, RGD:5688174, RGD:5688174 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO UniProtKB:P03372 (MGI:1267129|PMID:9628876) RGD PMID:9628876 MGI:1267129 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Padi2 peptidyl arginine deiminase 2 enables ISO
IEA		 UniProtKB:P03372 (PMID:22853951)
GO_REF:0000107		 RGD
Ensembl		 PMID:22853951 GO_REF:0000107 NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 enables ISO
IBA		 (PMID:19039327)
GO_REF:0000033		 RGD
GO_Central		 PMID:19039327 GO_REF:0000033 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IPI RGD PMID:23493398 RGD:10413906 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pcna proliferating cell nuclear antigen IPI RGD PMID:19683557 RGD:8694315 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 IPI RGD PMID:11117529 RGD:2303126 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IPI RGD PMID:16971528 RGD:1625219 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IPI RGD PMID:20689342 RGD:8553035 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IPI RGD PMID:18511507 RGD:4781450 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ppargc1b PPARG coactivator 1 beta enables ISO
IEA		 (PMID:11854298)
GO_REF:0000107		 RGD
Ensembl		 PMID:11854298 GO_REF:0000107 NCBI chr18:54,758,891...54,861,103
Ensembl chr18:54,758,902...54,861,194 		JBrowse link
G Ppid peptidylprolyl isomerase D enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:164,727,803...164,740,168
Ensembl chr 2:164,727,779...164,740,221 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P03372|UniProtKB:Q92731 (PMID:12039952), (PMID:17587566) RGD PMID:12039952 PMID:17587566 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Prrt2 proline-rich transmembrane protein 2 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:181,625,243...181,628,833
Ensembl chr 1:181,604,545...181,628,850 		JBrowse link
G Psmc3ip PSMC3 interacting protein IDA RGD PMID:11739747 RGD:628392 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rnf4 ring finger protein 4 IPI RGD PMID:9710597 RGD:69969 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Srarp steroid receptor associated and regulated protein enables ISO UniProtKB:P03372 (PMID:27125460) RGD PMID:27125460 NCBI chr 5:153,740,973...153,745,077
Ensembl chr 5:153,740,975...153,744,998 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IPI RGD PMID:14751567 RGD:1581138 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Strn striatin enables ISO
IEA		 UniProtKB:P03372 (PMID:15569929)
GO_REF:0000107		 RGD
Ensembl		 PMID:15569929 GO_REF:0000107 NCBI chr 6:16,335,265...16,422,159
Ensembl chr 6:16,335,358...16,417,083 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863) RGD PMID:20078863 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 enables ISO (PMID:7923369) RGD PMID:7923369 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Trip4 thyroid hormone receptor interactor 4 enables ISO UniProtKB:P03372 (PMID:25219498) RGD PMID:25219498 NCBI chr 8:66,351,861...66,439,679
Ensembl chr 8:66,353,248...66,439,774 		JBrowse link
G Wbp2 WW domain binding protein 2 enables ISO
IEA		 UniProtKB:P03372 (PMID:21642474)
GO_REF:0000107		 RGD
Ensembl		 PMID:21642474 GO_REF:0000107 NCBI chr10:101,312,476...101,320,775
Ensembl chr10:101,312,446...101,320,736 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 enables ISO (PMID:15602573) RGD PMID:15602573 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846 		JBrowse link
G Zfp366 zinc finger protein 366 enables ISO
IBA		 (PMID:17085477)
GO_REF:0000033		 RGD
GO_Central		 PMID:17085477 GO_REF:0000033 NCBI chr 2:30,578,552...30,640,546
Ensembl chr 2:30,578,715...30,642,182 		JBrowse link
nuclear glucocorticoid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta IPI RGD PMID:20155810 RGD:4892121 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:17884810 RGD:2312268 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor IDA RGD PMID:11279115 RGD:1300077 NCBI chr11:35,021,536...35,038,322
Ensembl chr11:35,021,596...35,038,319 		JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 enables ISO (PMID:7693550), (PMID:8341706) RGD PMID:7693550 PMID:8341706 NCBI chr 4:161,703,379...161,711,833
Ensembl chr 4:161,703,379...161,711,833 		JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 IPI RGD PMID:18261979 RGD:2302206 NCBI chr12:7,623,930...7,699,474
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Ipo13 importin 13 IPI RGD PMID:16809634 RGD:4892097 NCBI chr 5:131,433,770...131,454,044
Ensembl chr 5:131,433,776...131,454,043 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI RGD PMID:9742117 RGD:633360 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IPI RGD PMID:10866662 RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IPI RGD PMID:15870285 RGD:5688307 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 enables IPI
IEA
IBA		 PMID:15591535
GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 PMID:15591535 GO_REF:0000033 GO_REF:0000118, RGD:10047331 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 enables IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
UniProtKB:P04150 (MGI:5644026|PMID:15591535)		 Ensembl
TreeGrafter
GO_Central
RGD		 PMID:15591535 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5644026 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables IPI
IBA		 PMID:15591535
GO_REF:0000033		 GO_Central PMID:15591535 GO_REF:0000033, RGD:10047331 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 enables ISO
IBA		 UniProtKB:P04150 (PMID:10364267), (PMID:11266503), (PMID:12773562)
GO_REF:0000033		 RGD
GO_Central		 PMID:10364267 PMID:11266503 PMID:12773562 GO_REF:0000033 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 IPI RGD PMID:11117529 RGD:2303126 NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033 		JBrowse link
G Psmc3ip PSMC3 interacting protein IDA RGD PMID:11739747 RGD:628392 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rara retinoic acid receptor, alpha enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rarb retinoic acid receptor, beta enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Smad3 SMAD family member 3 enables ISO UniProtKB:P04150 (PMID:12902338) RGD PMID:12902338 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IPI RGD PMID:20155810 RGD:4892121 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B enables IEA
ISO		 GO_REF:0000107
UniProtKB:P04150 (PMID:12552091)		 Ensembl
RGD		 PMID:12552091 GO_REF:0000107 NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863) RGD PMID:20078863 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta enables ISO
IEA		 UniProtKB:P04150 (PMID:9079630)
GO_REF:0000107		 RGD
Ensembl		 PMID:9079630 GO_REF:0000107 NCBI chr14:77,696,332...77,705,715
Ensembl chr14:77,696,333...77,705,741 		JBrowse link
nuclear mineralocorticoid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad3 SMAD family member 3 enables ISO UniProtKB:P22199 (PMID:12902338) RGD PMID:12902338 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
nuclear progesterone receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P06401 (PMID:12039952) RGD PMID:12039952 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Trerf1 transcriptional regulating factor 1 enables ISO UniProtKB:P06401 (PMID:17015480) RGD PMID:17015480 NCBI chr 9:13,631,619...13,858,326
Ensembl chr 9:13,634,126...13,857,029 		JBrowse link
nuclear receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 enables ISO UniProtKB:P37231 (PMID:22351778) RGD PMID:22351778 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847 		JBrowse link
G Arid1a AT-rich interaction domain 1A enables ISO UniProtKB:P03372|UniProtKB:P10276 (PMID:17363140) RGD PMID:17363140 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 enables ISO UniProtKB:Q13285 (PMID:22927646) RGD PMID:22927646 NCBI chr16:50,966,404...50,997,827
Ensembl chr16:50,966,229...51,008,233 		JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor enables ISO UniProtKB:P03372 (PMID:17505058) RGD PMID:17505058 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080 		JBrowse link
G Bud31 BUD31 homolog enables ISS
ISO		 GO_REF:0000024
(PMID:25091737)		 UniProt
RGD		 PMID:25091737 GO_REF:0000024 NCBI chr12:9,462,838...9,470,387
Ensembl chr12:9,462,441...9,470,509 		JBrowse link
G C1d C1D nuclear receptor corepressor enables ISO (PMID:9405624) RGD PMID:9405624 NCBI chr14:91,660,951...91,673,177
Ensembl chr14:91,660,989...91,672,852 		JBrowse link
G Crx cone-rod homeobox enables ISO UniProtKB:Q8R1B8 (MGI:3652638|PMID:16574740) RGD PMID:16574740 MGI:3652638 NCBI chr 1:76,539,812...76,553,694
Ensembl chr 1:76,540,141...76,545,818 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO UniProtKB:P04150|UniProtKB:P06537|UniProtKB:P10275|UniProtKB:P35398|UniProtKB:P51449 (MGI:5302136|PMID:22170608)
UniProtKB:P20393 (PMID:22170608)		 RGD PMID:22170608 MGI:5302136 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 enables ISO UniProtKB:P04150|UniProtKB:P06537 (MGI:5302136|PMID:22170608) RGD PMID:22170608 MGI:5302136 NCBI chr 3:78,374,995...78,405,001
Ensembl chr 3:78,374,995...78,404,965 		JBrowse link
G Ctnnb1 catenin beta 1 enables ISO
IBA		 UniProtKB:P51448 (MGI:2683830|PMID:14687547)
GO_REF:0000033
UniProtKB:P10275 (PMID:12799378)		 RGD
GO_Central		 PMID:12799378 PMID:14687547 GO_REF:0000033 MGI:2683830 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G ENSRNOG00000065671 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr17:43,317,991...43,319,514 JBrowse link
G ENSRNOG00000068443 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 2:69,414,825...69,415,455 JBrowse link
G Ep300 E1A binding protein p300 enables ISO UniProtKB:P35398 (PMID:9862959) RGD PMID:9862959 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO
IEA		 UniProtKB:P35398 (PMID:18658046)
GO_REF:0000107		 RGD
Ensembl		 PMID:18658046 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables IPI
IDA		 PMID:11043578 BHF-UCL PMID:11043578 PMID:11043578 RGD:8554127, RGD:8554127 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IPI RGD PMID:15860571 RGD:1600916 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Jup junction plakoglobin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057 		JBrowse link
G Lrp2 LDL receptor related protein 2 enables IPI PMID:16143106 UniProt PMID:16143106 RGD:13210563 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO UniProtKB:P11416 (MGI:1097733|PMID:9325263)
UniProtKB:P10827|UniProtKB:P35398 (PMID:10478845), (PMID:18391015), (PMID:9653119)		 RGD PMID:9325263 PMID:9653119 PMID:10478845 PMID:18391015 MGI:1097733 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO
IEA		 UniProtKB:P35398 (PMID:9862959)
GO_REF:0000107		 RGD
Ensembl		 PMID:9862959 GO_REF:0000107 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 enables IPI
IBA
ISO		 Pgr-A and Pgr-B
GO_REF:0000033
UniProtKB:P03372|UniProtKB:P24468 (PMID:10207113), (PMID:17363140), (PMID:18798693)		 GO_Central
RGD		 PMID:10207113 PMID:17363140 PMID:18798693 PMID:18566116 PMID:18566116 More... GO_REF:0000033, RGD:5688220, RGD:5688220, RGD:5688220 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 enables IPI
IEA
IBA
ISO		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000104
UniProtKB:P24468|UniProtKB:P35398 (PMID:10478845), (PMID:18798693)
Pgr-B		 TreeGrafter
GO_Central
UniProt
RGD		 PMID:10478845 PMID:18798693 PMID:20678994 PMID:9742117 PMID:9742117 More... GO_REF:0000033 GO_REF:0000104 GO_REF:0000118, RGD:5688148, RGD:633360, RGD:633360, RGD:5688148 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 enables ISO
IBA
IEA		 UniProtKB:P24468 (PMID:18798693), (PMID:9267036)
GO_REF:0000033
GO_REF:0000104		 RGD
GO_Central
UniProt		 PMID:9267036 PMID:18798693 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Ncoa7 nuclear receptor coactivator 7 enables ISO (PMID:11971969) RGD PMID:11971969 NCBI chr 1:26,856,228...27,016,950
Ensembl chr 1:26,856,530...27,015,871 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables ISO
IEA		 UniProtKB:P35398 (PMID:9328355)
GO_REF:0000107		 RGD
Ensembl		 PMID:9328355 GO_REF:0000107 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IPI RGD PMID:15870285 RGD:5688307 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 enables IEA
ISO		 GO_REF:0000107
UniProtKB:P10275|UniProtKB:P15207 (PMID:11875111)		 Ensembl
RGD		 PMID:11875111 GO_REF:0000107 NCBI chr  X:50,756,886...50,761,014
Ensembl chr  X:50,756,886...50,761,011 		JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 enables ISO (PMID:9727070) RGD PMID:9727070 NCBI chr11:62,460,213...62,496,665
Ensembl chr11:62,460,213...62,496,658 		JBrowse link
G Nrbf2 nuclear receptor binding factor 2 IDA RGD PMID:10786636 RGD:61677 NCBI chr20:21,308,555...21,326,881
Ensembl chr20:21,308,576...21,326,818 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 enables ISO UniProtKB:P08235 (PMID:11518808) RGD PMID:11518808 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Per2 period circadian regulator 2 enables ISO UniProtKB:P20393|UniProtKB:P23204|UniProtKB:P37238|UniProtKB:P49698|UniProtKB:P63058|UniProtKB:Q06219|UniProtKB:Q3UV55 (MGI:4429726|PMID:20159955), (MGI:4881351|PMID:21035761), (MGI:5302136|PMID:22170608) RGD PMID:20159955 PMID:21035761 PMID:22170608 MGI:4429726 MGI:4881351 MGI:5302136 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables ISO
IEA		 UniProtKB:P24468 (PMID:18798693)
GO_REF:0000107		 RGD
Ensembl		 PMID:18798693 GO_REF:0000107 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Prox1 prospero homeobox 1 enables ISO UniProtKB:O00482|UniProtKB:P41235 (PMID:15143342), (PMID:15205472), (PMID:16488887) RGD PMID:15143342 PMID:15205472 PMID:16488887 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Sirt1 sirtuin 1 enables ISO UniProtKB:Q07869 (PMID:24043310) RGD PMID:24043310 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc30a9 solute carrier family 30 member 9 enables ISO PR:P19091|PR:P19785|PR:Q61026 (PMID:15988012) RGD PMID:15988012 NCBI chr14:40,816,284...40,870,992
Ensembl chr14:40,816,290...40,870,929 		JBrowse link
G Smad3 SMAD family member 3 enables ISO UniProtKB:P37231 (PMID:31023188) RGD PMID:31023188 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 enables ISO UniProtKB:O00482|UniProtKB:P03372|UniProtKB:P19793|UniProtKB:P35398|UniProtKB:Q13285|UniProtKB:Q96RI1 (PMID:14701856)
UniProtKB:P10276|UniProtKB:P19793 (PMID:17363140)		 RGD PMID:14701856 PMID:17363140 NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326 		JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 enables ISO
IBA
IEA		 UniProtKB:P03372 (PMID:17363140)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:17363140 GO_REF:0000033 GO_REF:0000118 NCBI chr10:84,159,270...84,180,547
Ensembl chr10:84,159,275...84,179,989 		JBrowse link
G Snw1 SNW domain containing 1 enables ISO (PMID:19934264) RGD PMID:19934264 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Sra1 steroid receptor RNA activator 1 IPI RGD PMID:12350225 RGD:628587 NCBI chr18:28,269,192...28,273,023
Ensembl chr18:28,269,311...28,272,538 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 enables ISO UniProtKB:P37231|UniProtKB:Q03181|UniProtKB:Q07869 (PMID:26504087) RGD PMID:26504087 NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863) RGD PMID:20078863 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 enables ISO (PMID:15207008) RGD PMID:15207008 NCBI chr 1:185,139,223...185,327,881
Ensembl chr 1:185,116,111...185,327,881 		JBrowse link
G Tada3 transcriptional adaptor 3 enables ISO UniProtKB:O75469|UniProtKB:P03372|UniProtKB:P10276|UniProtKB:P11473|UniProtKB:P13631|UniProtKB:Q9NNW7 (PMID:20413580) RGD PMID:20413580 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO UniProtKB:P10275 (PMID:20181722) RGD PMID:20181722 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO UniProtKB:P10275 (PMID:12799378) RGD PMID:12799378 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:15322135) RGD PMID:15322135 NCBI chr 4:66,567,342...66,692,029
Ensembl chr 4:66,566,686...66,717,241 		JBrowse link
G Trip4 thyroid hormone receptor interactor 4 enables ISO (PMID:10454579) RGD PMID:10454579 NCBI chr 8:66,351,861...66,439,679
Ensembl chr 8:66,353,248...66,439,774 		JBrowse link
G Uba3 ubiquitin-like modifier activating enzyme 3 IPI RGD PMID:11818503 RGD:634396 NCBI chr 4:129,789,526...129,810,707
Ensembl chr 4:129,789,204...129,810,606 		JBrowse link
nuclear retinoic acid receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 enables ISO
IEA		 UniProtKB:P10276 (PMID:22351778)
GO_REF:0000107		 RGD
Ensembl		 PMID:22351778 GO_REF:0000107 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 enables ISO (MGI:3688807|PMID:16606617) RGD PMID:16606617 MGI:3688807 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538 		JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 enables ISO (PMID:16778766) RGD PMID:16778766 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Ctbp2 C-terminal binding protein 2 enables ISO PR:P28700 (PMID:23775127) RGD PMID:23775127 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO
ISS		 (PMID:10428834)
GO_REF:0000024		 RGD
UniProt		 PMID:10428834 GO_REF:0000024 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483 		JBrowse link
G Med1 mediator complex subunit 1 enables ISO
IBA		 UniProtKB:P10276|UniProtKB:P19793 (PMID:9653119)
GO_REF:0000033		 RGD
GO_Central		 PMID:9653119 GO_REF:0000033 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Med25 mediator complex subunit 25 enables ISO UniProtKB:P10276 (PMID:17641689)
UniProtKB:P11416 (MGI:5297783|PMID:17641689)		 RGD PMID:17641689 MGI:5297783 NCBI chr 1:95,359,961...95,375,827
Ensembl chr 1:95,360,284...95,375,877 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IPI in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IPI RGD PMID:10866662 RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables IPI
ISO		 in absence of retinoic acid
(PMID:8961273)		 RGD PMID:8961273 PMID:15234273 RGD:5688233 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IPI in absence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 IPI RGD PMID:9003453 RGD:633448 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 enables ISO UniProtKB:P11416 (MGI:3687657|PMID:10531331) RGD PMID:10531331 MGI:3687657 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO UniProtKB:P10276 (MGI:1267129|PMID:9628876) RGD PMID:9628876 MGI:1267129 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Pramex1 PRAME like, X-linked 1 enables ISO (PMID:16179254) RGD PMID:16179254 NCBI chr  X:98,567,994...98,574,654
Ensembl chr  X:98,569,415...98,572,096 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P10276|UniProtKB:P19793 (PMID:12039952) RGD PMID:12039952 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Rxra retinoid X receptor alpha IPI RGD PMID:15234273 RGD:5688233 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta IDA RGD PMID:1662118 RGD:729677 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Snw1 SNW domain containing 1 enables ISO (PMID:11514567) RGD PMID:11514567 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863)
(MGI:6304756|PMID:20078863)		 RGD PMID:20078863 MGI:6304756 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
nuclear retinoid X receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Fus Fus RNA binding protein IPI RGD PMID:9440806 RGD:9685715 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO
ISS		 (PMID:10428834)
GO_REF:0000024		 RGD
UniProt		 PMID:10428834 GO_REF:0000024 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752 		JBrowse link
G Med25 mediator complex subunit 25 enables ISO UniProtKB:P28700 (PMID:17641689)
UniProtKB:P28700 (MGI:5297783|PMID:17641689)		 RGD PMID:17641689 MGI:5297783 NCBI chr 1:95,359,961...95,375,827
Ensembl chr 1:95,360,284...95,375,877 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IPI in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI in presence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IPI RGD PMID:10866662 RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables IPI
ISO		 in absence of retinoic acid
(PMID:7760852), (PMID:8961273)		 RGD PMID:7760852 PMID:8961273 PMID:15234273 RGD:5688233 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IPI in absence of retinoic acid RGD PMID:15234273 RGD:5688233 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 IPI RGD PMID:9003453 RGD:633448 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 enables IDA
ISO
IEA
IPI		 (PMID:7760852)
GO_REF:0000107		 RGD
Ensembl		 PMID:7760852 PMID:7892230 PMID:7971966 GO_REF:0000107, RGD:729016, RGD:61674 NCBI chr 1:95,041,967...95,047,358
Ensembl chr 1:95,041,967...95,047,377 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IPI RGD PMID:7935418 RGD:61675 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 enables IEA
ISO		 GO_REF:0000107
(PMID:7760852)		 Ensembl
RGD		 PMID:7760852 GO_REF:0000107 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 enables ISO
IBA		 UniProtKB:P28704 (MGI:3687657|PMID:10531331)
GO_REF:0000033		 RGD
GO_Central		 PMID:10531331 GO_REF:0000033 MGI:3687657 NCBI chr11:14,895,843...14,979,490
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO UniProtKB:P28700 (MGI:1267129|PMID:9628876) RGD PMID:9628876 MGI:1267129 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO UniProtKB:P19793 (PMID:19043829), (PMID:9568715) RGD PMID:9568715 PMID:19043829 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Rarb retinoic acid receptor, beta IPI RGD PMID:15234273 RGD:5688233 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Rarg retinoic acid receptor, gamma enables ISO (MGI:3799604|PMID:18439490) RGD PMID:18439490 MGI:3799604 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177 		JBrowse link
G Sumo2 small ubiquitin-like modifier 2 IDA RGD PMID:19850744 RGD:8553529 NCBI chr10:100,771,941...100,784,503
Ensembl chr10:100,686,797...100,784,513 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863)
(MGI:6304756|PMID:20078863)		 RGD PMID:20078863 MGI:6304756 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 enables ISO (PMID:7760852) RGD PMID:7760852 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799 		JBrowse link
G Vdr vitamin D receptor enables ISO
IEA		 UniProtKB:P19793 (PMID:17426122), (PMID:28698609)
GO_REF:0000107		 RGD
Ensembl		 PMID:17426122 PMID:28698609 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
nuclear thyroid hormone receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Brd8 bromodomain containing 8 enables ISO UniProtKB:P10828 (PMID:9368056) RGD PMID:9368056 NCBI chr18:26,204,892...26,229,999
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Fus Fus RNA binding protein IDA RGD PMID:9440806 RGD:9685715 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Gtf2b general transcription factor IIB enables ISO
IEA		 UniProtKB:P10827 (PMID:8524305)
GO_REF:0000107		 RGD
Ensembl		 PMID:8524305 GO_REF:0000107 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 enables ISO UniProtKB:P10828 (PMID:15625236) RGD PMID:15625236 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor IPI RGD PMID:11641275 PMID:11641275 RGD:1599577, RGD:1599577 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313 		JBrowse link
G Med1 mediator complex subunit 1 enables IDA
IBA
ISO		 GO_REF:0000033
UniProtKB:P10827 (PMID:10198638), (PMID:9653119)		 GO_Central
RGD		 PMID:9653119 PMID:10198638 PMID:10037764 GO_REF:0000033, RGD:5134969 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Med12 mediator complex subunit 12 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Med13 mediator complex subunit 13 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr10:71,086,978...71,176,535
Ensembl chr10:71,090,516...71,177,242 		JBrowse link
G Med16 mediator complex subunit 16 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 7:9,798,641...9,811,172
Ensembl chr 7:9,798,668...9,811,172 		JBrowse link
G Med17 mediator complex subunit 17 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 8:12,101,594...12,120,592
Ensembl chr 8:12,101,594...12,120,592 		JBrowse link
G Med24 mediator complex subunit 24 enables ISO
IEA		 (PMID:10198638)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198638 GO_REF:0000107 NCBI chr10:83,664,609...83,702,315
Ensembl chr10:83,664,609...83,690,123 		JBrowse link
G Med30 mediator complex subunit 30 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 7:84,004,735...84,026,474
Ensembl chr 7:84,004,722...84,026,595 		JBrowse link
G Med4 mediator complex subunit 4 enables ISO
IEA		 (PMID:10198638)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198638 GO_REF:0000107 NCBI chr15:48,696,542...48,706,818
Ensembl chr15:48,696,511...48,706,820 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI RGD PMID:9742117 RGD:633360 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 enables IPI
IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:11443112)		 Ensembl
UniProt
RGD		 PMID:11443112 PMID:10866662 GO_REF:0000024 GO_REF:0000107, RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables IEA
ISO		 GO_REF:0000118
PR:P37242|PR:Q9Z0Y9 (PMID:19052228), (PMID:8961273)		 TreeGrafter
RGD		 PMID:8961273 PMID:19052228 GO_REF:0000118 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 IPI RGD PMID:9003453 RGD:633448 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO UniProtKB:P04625 (MGI:1267129|PMID:9628876) RGD PMID:9628876 MGI:1267129 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Nup62 nucleoporin 62 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P10828 (PMID:12039952) RGD PMID:12039952 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Psmc3ip PSMC3 interacting protein IDA RGD PMID:11739747 RGD:628392 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rxra retinoid X receptor alpha IPI RGD PMID:10037764 RGD:5134969 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta IDA RGD PMID:1662118 RGD:729677 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863)
(MGI:6304756|PMID:20078863)		 RGD PMID:20078863 MGI:6304756 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 enables ISO UniProtKB:P04625 (PMID:10744685) RGD PMID:10744685 NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables ISO UniProtKB:P04625 (PMID:10409738) RGD PMID:10409738 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 enables ISO (PMID:7776974) RGD PMID:7776974 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
nuclear vitamin D receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hr HR, lysine demethylase and nuclear receptor corepressor IPI RGD PMID:12847098 RGD:1599578 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313 		JBrowse link
G Med1 mediator complex subunit 1 enables IDA
IBA
ISO		 GO_REF:0000033
UniProtKB:P11473 (PMID:9653119)		 GO_Central
RGD		 PMID:9653119 PMID:17786964 GO_REF:0000033, RGD:5133443 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 IPI RGD PMID:10866662 RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Rxra retinoid X receptor alpha enables ISO
IEA		 UniProtKB:P11473 (PMID:17426122)
GO_REF:0000107		 RGD
Ensembl		 PMID:17426122 GO_REF:0000107 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta IDA RGD PMID:1662118 RGD:729677 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Snw1 SNW domain containing 1 enables ISO (PMID:12529369) RGD PMID:12529369 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 enables ISO UniProtKB:P11473 (PMID:10744685) RGD PMID:10744685 NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables ISO UniProtKB:P11473 (PMID:10409738) RGD PMID:10409738 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Tob2 transducer of ERBB2, 2 enables ISO PR:P48281 (PMID:18358842) RGD PMID:18358842 NCBI chr 7:113,362,703...113,371,423
Ensembl chr 7:113,361,148...113,372,688 		JBrowse link
STAT family protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha enables ISO UniProtKB:P40763 (PMID:15664994), (PMID:24429361) RGD PMID:15664994 PMID:24429361 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L enables ISO UniProtKB:P42224 (PMID:26479788) RGD PMID:26479788 NCBI chr11:64,814,926...64,824,539
Ensembl chr11:64,814,926...64,824,538 		JBrowse link
G Ep300 E1A binding protein p300 enables ISO UniProtKB:P42224 (PMID:26479788) RGD PMID:26479788 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Fam220a family with sequence similarity 220, member A enables IBA
ISO		 GO_REF:0000033
PR:P42227 (PMID:26026268)		 GO_Central
RGD		 PMID:26026268 GO_REF:0000033 NCBI chr12:10,997,969...11,013,962
Ensembl chr12:10,997,740...11,016,501 		JBrowse link
G H2bc9 H2B clustered histone 9 enables ISO UniProtKB:P42224 (PMID:26479788) RGD PMID:26479788 NCBI chr17:42,470,593...42,478,590 JBrowse link
G Hsf1 heat shock transcription factor 1 IPI RGD PMID:22426029 RGD:10402789 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 enables ISO UniProtKB:P42224 (PMID:26479788) RGD PMID:26479788 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO UniProtKB:P40763 (PMID:28467929) RGD PMID:28467929 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 enables IEA
ISO		 GO_REF:0000107
PR:P42227 (PMID:26026268)		 Ensembl
RGD		 PMID:26026268 GO_REF:0000107 NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Ptprt protein tyrosine phosphatase, receptor type, T enables ISO UniProtKB:P40763 (PMID:17360477) RGD PMID:17360477 NCBI chr 3:150,189,343...151,288,145
Ensembl chr 3:150,194,859...151,288,124 		JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO
IEA		 UniProtKB:P40763 (PMID:24429361)
GO_REF:0000107		 RGD
Ensembl		 PMID:24429361 GO_REF:0000107 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
Tat protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta enables ISO
IEA		 UniProtKB:P04608 (PMID:16687403)
GO_REF:0000107		 RGD
Ensembl		 PMID:16687403 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Ctdp1 CTD phosphatase subunit 1 enables ISO UniProtKB:P04608 (PMID:15723517) RGD PMID:15723517 NCBI chr18:73,854,277...73,916,232
Ensembl chr18:73,854,282...73,916,457 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 enables ISO
IEA		 UniProtKB:Q6RHR9|UniProtKB:Q8VBX6|UniProtKB:Q9WVQ1 (PMID:15509766)
GO_REF:0000107		 RGD
Ensembl		 PMID:15509766 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 enables ISO UniProtKB:Q07813 (PMID:14752510) RGD PMID:14752510 NCBI chr 5:55,842,414...55,853,326
Ensembl chr 5:55,842,426...55,853,967 		JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 enables ISO UniProtKB:Q86TI0 (PMID:22354992) RGD PMID:22354992 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450 		JBrowse link
G Mdfic MyoD family inhibitor domain containing enables ISO (PMID:12944466), (PMID:16260749) RGD PMID:12944466 PMID:16260749 NCBI chr 4:43,972,310...44,052,162
Ensembl chr 4:43,972,507...44,052,161 		JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:9094689) RGD PMID:9094689 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables ISO
IEA		 UniProtKB:P04608 (PMID:16687403)
GO_REF:0000107		 RGD
Ensembl		 PMID:16687403 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 enables ISO UniProtKB:P04608 (PMID:16687403) RGD PMID:16687403 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    binding 18037
      protein binding 14764
        transcription factor binding 663
          DNA-binding transcription factor binding 537
            RNA polymerase II-specific DNA-binding transcription factor binding 388
              NF-kappaB binding 38
              NFAT protein binding 6
              STAT family protein binding 11
              Tat protein binding 9
              aryl hydrocarbon receptor binding 9
              nuclear receptor binding + 159
paths to the root