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Gene: Cpne1 (copine 1) Rattus norvegicus
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Symbol: Cpne1
Name: copine 1
Description: Predicted to have several functions, including NF-kappaB binding activity; phospholipid binding activity; and protein homodimerization activity. Predicted to be involved in several processes, including cellular response to calcium ion; generation of neurons; and regulation of signal transduction. Predicted to localize to the cytosol; nucleus; and plasma membrane. Orthologous to human CPNE1 (copine 1); INTERACTS WITH endosulfan; 17beta-estradiol (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: copine I; LOC362249
Orthologs:
Homo sapiens (human) : CPNE1 (copine 1)  HGNC  Alliance
Mus musculus (house mouse) : Cpne1 (copine I)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cpne1 (copine 1)
Canis lupus familiaris (dog) : CPNE1 (copine 1)
Sus scrofa (pig) : CPNE1 (copine 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03151,617,733 - 151,625,448 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,616,037 - 151,625,644 (-)Ensembl
Rnor_5.03157,980,656 - 157,994,839 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.13146,386,321 - 146,433,463 (-)NCBI
Celera3143,310,994 - 143,318,709 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cpne1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311148
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.