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Gene: Arnt (aryl hydrocarbon receptor nuclear translocator) Rattus norvegicus
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Symbol: Arnt
Name: aryl hydrocarbon receptor nuclear translocator
Description: Contributes to sequence-specific DNA binding activity. Involved in response to hypoxia. Localizes to the nucleus. Human ortholog(s) of this gene implicated in renal cell carcinoma. Orthologous to human ARNT (aryl hydrocarbon receptor nuclear translocator); PARTICIPATES IN hypoxia inducible factor pathway; aryl hydrocarbon receptor signaling pathway; renal cell carcinoma pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Arnt1; Aryl hydrocarbon receptor nuclear translocator 1; dioxin receptor, nuclear translocator; HIF-1 beta; HIF-1-beta; HIF1-beta; hypoxia-inducible factor 1 beta; hypoxia-inducible factor 1-beta
Orthologs:
Homo sapiens (human) : ARNT (aryl hydrocarbon receptor nuclear translocator)  HGNC  Alliance
Mus musculus (house mouse) : Arnt (aryl hydrocarbon receptor nuclear translocator)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Arnt (aryl hydrocarbon receptor nuclear translocator)
Pan paniscus (bonobo/pygmy chimpanzee) : ARNT (aryl hydrocarbon receptor nuclear translocator)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Arnt (aryl hydrocarbon receptor nuclear translocator)
Sus scrofa (pig) : ARNT (aryl hydrocarbon receptor nuclear translocator)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02196,594,178 - 196,651,486 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2196,594,303 - 196,651,179 (+)Ensembl
Rnor_5.02216,092,481 - 216,150,842 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42190,333,978 - 190,391,015 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12190,296,731 - 190,353,769 (+)NCBI
Celera2175,530,933 - 175,587,940 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Arnt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2153
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.