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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear thyroid hormone receptor binding
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Accession:GO:0046966 term browser browse the term
Definition:Binding to a nuclear thyroid hormone receptor.
Synonyms:narrow_synonym: ligand-dependent thyroid hormone receptor interactor activity
 broad_synonym: thyroid hormone receptor binding


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nuclear thyroid hormone receptor binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15941852) RGD PMID:15941852 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Brd8 bromodomain containing 8 enables ISO UniProtKB:P10828 (PMID:9368056) RGD PMID:9368056 NCBI chr18:26,204,892...26,229,999
Ensembl chr18:26,181,732...26,229,884 		JBrowse link
G Fus Fus RNA binding protein IDA RGD PMID:9440806 RGD:9685715 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Gtf2b general transcription factor IIB enables ISO
IEA		 UniProtKB:P10827 (PMID:8524305)
GO_REF:0000107		 RGD
Ensembl		 PMID:8524305 GO_REF:0000107 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651 		JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 enables ISO UniProtKB:P10828 (PMID:15625236) RGD PMID:15625236 NCBI chr 1:97,321,417...97,349,455
Ensembl chr 1:97,321,394...97,349,455 		JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor IPI RGD PMID:11641275 PMID:11641275 RGD:1599577, RGD:1599577 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313 		JBrowse link
G Med1 mediator complex subunit 1 enables IDA
ISO
IBA		 UniProtKB:P10827 (PMID:10198638), (PMID:9653119)
GO_REF:0000033		 RGD
GO_Central		 PMID:9653119 PMID:10198638 PMID:10037764 GO_REF:0000033, RGD:5134969 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Med12 mediator complex subunit 12 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Med13 mediator complex subunit 13 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr10:71,086,978...71,176,535
Ensembl chr10:71,090,516...71,177,242 		JBrowse link
G Med16 mediator complex subunit 16 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 7:9,798,641...9,811,172
Ensembl chr 7:9,798,668...9,811,172 		JBrowse link
G Med17 mediator complex subunit 17 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 8:12,101,594...12,120,592
Ensembl chr 8:12,101,594...12,120,592 		JBrowse link
G Med24 mediator complex subunit 24 enables ISO
IEA		 (PMID:10198638)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198638 GO_REF:0000107 NCBI chr10:83,664,609...83,702,315
Ensembl chr10:83,664,609...83,690,123 		JBrowse link
G Med30 mediator complex subunit 30 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 7:84,004,735...84,026,474
Ensembl chr 7:84,004,722...84,026,595 		JBrowse link
G Med4 mediator complex subunit 4 enables ISO
IEA		 (PMID:10198638)
GO_REF:0000107		 RGD
Ensembl		 PMID:10198638 GO_REF:0000107 NCBI chr15:48,696,542...48,706,818
Ensembl chr15:48,696,511...48,706,820 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IPI RGD PMID:9742117 RGD:633360 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 enables IPI
ISO
ISS
IEA		 (PMID:11443112)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11443112 PMID:10866662 GO_REF:0000024 GO_REF:0000107, RGD:633378 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables ISO PR:P37242|PR:Q9Z0Y9 (PMID:19052228), (PMID:8961273) RGD PMID:8961273 PMID:19052228 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 IPI RGD PMID:9003453 RGD:633448 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 enables ISO UniProtKB:P04625 (MGI:1267129|PMID:9628876) RGD PMID:9628876 MGI:1267129 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Nup62 nucleoporin 62 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 enables ISO UniProtKB:P10828 (PMID:12039952) RGD PMID:12039952 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Psmc3ip PSMC3 interacting protein IDA RGD PMID:11739747 RGD:628392 NCBI chr10:86,024,281...86,027,928
Ensembl chr10:86,023,950...86,027,423 		JBrowse link
G Rxra retinoid X receptor alpha IPI RGD PMID:10037764 RGD:5134969 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Rxrb retinoid X receptor beta IDA RGD PMID:1662118 RGD:729677 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 enables ISO (PMID:20078863)
(MGI:6304756|PMID:20078863)		 RGD PMID:20078863 MGI:6304756 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Taf11 TATA-box binding protein associated factor 11 enables ISO UniProtKB:P04625 (PMID:10744685) RGD PMID:10744685 NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables ISO UniProtKB:P04625 (PMID:10409738) RGD PMID:10409738 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 enables ISO (PMID:10198638) RGD PMID:10198638 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 enables ISO (PMID:7776974) RGD PMID:7776974 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20488
    binding 17537
      protein binding 14559
        transcription factor binding 655
          DNA-binding transcription factor binding 531
            RNA polymerase II-specific DNA-binding transcription factor binding 382
              nuclear receptor binding 155
                nuclear thyroid hormone receptor binding 29
paths to the root