Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Gtf2h1 (general transcription factor IIH subunit 1) Rattus norvegicus
Analyze
Symbol: Gtf2h1
Name: general transcription factor IIH subunit 1
Description: Exhibits chromatin binding activity. Predicted to contribute to DNA-dependent ATPase activity and RNA polymerase II CTD heptapeptide repeat kinase activity. Involved in transcription by RNA polymerase II. Localizes to the transcription factor TFIIH holo complex. Orthologous to human GTF2H1 (general transcription factor IIH subunit 1); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: general transcription factor II H, polypeptide 1 ; general transcription factor IIH, polypeptide 1; LOC361580
Orthologs:
Homo sapiens (human) : GTF2H1 (general transcription factor IIH subunit 1)  HGNC  Alliance
Mus musculus (house mouse) : Gtf2h1 (general transcription factor II H, polypeptide 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gtf2h1 (general transcription factor IIH subunit 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GTF2H1 (general transcription factor IIH subunit 1)
Canis lupus familiaris (dog) : GTF2H1 (general transcription factor IIH subunit 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gtf2h1 (general transcription factor IIH subunit 1)
Sus scrofa (pig) : GTF2H1 (general transcription factor IIH subunit 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01102,849,618 - 102,877,939 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01103,923,681 - 103,951,995 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4197,352,251 - 97,380,298 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1197,430,363 - 97,458,409 (+)NCBI
Celera191,568,224 - 91,596,262 (+)NCBICelera
Cytogenetic Map1q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Gtf2h1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308225
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.