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Gene: Exosc9 (exosome component 9) Rattus norvegicus
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Symbol: Exosc9
Name: exosome component 9
Description: Exhibits RNA polymerase II activating transcription factor binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasmic exosome (RNase complex) and nucleus. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia. Orthologous to human EXOSC9 (exosome component 9); PARTICIPATES IN RNA degradation pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: exosome complex component RRP45; exosome complex exonuclease RRP45; LOC294975
Orthologs:
Homo sapiens (human) : EXOSC9 (exosome component 9)  HGNC  Alliance
Mus musculus (house mouse) : Exosc9 (exosome component 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Exosc9 (exosome component 9)
Pan paniscus (bonobo/pygmy chimpanzee) : EXOSC9 (exosome component 9)
Canis lupus familiaris (dog) : EXOSC9 (exosome component 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Exosc9 (exosome component 9)
Sus scrofa (pig) : EXOSC9 (exosome component 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02123,264,679 - 123,275,623 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02142,879,824 - 142,890,726 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42123,051,592 - 123,062,494 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12122,996,553 - 123,007,456 (+)NCBI
Celera2114,373,963 - 114,384,865 (+)NCBICelera
Cytogenetic Map2q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Exosc9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307888
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.