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Gene: Slc30a9 (solute carrier family 30 member 9) Rattus norvegicus
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Symbol: Slc30a9
Name: solute carrier family 30 member 9
RGD ID: 1593180
Description: Predicted to have chromatin binding activity; nuclear receptor binding activity; and nuclear receptor transcription coactivator activity. Predicted to be involved in cellular zinc ion homeostasis; positive regulation of transcription by RNA polymerase II; and zinc ion transport. Predicted to localize to several cellular components, including cytoplasmic vesicle; cytoskeleton; and endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9); INTERACTS WITH bisphenol A; flutamide; gentamycin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC498358; similar to solute carrier family 30 (zinc transporter), member 9; solute carrier family 30 (zinc transporter), member 9; zinc transporter 9
Orthologs:
Homo sapiens (human) : SLC30A9 (solute carrier family 30 member 9)  HGNC  Alliance
Mus musculus (house mouse) : Slc30a9 (solute carrier family 30 (zinc transporter), member 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc30a9 (solute carrier family 30 member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC30A9 (solute carrier family 30 member 9)
Canis lupus familiaris (dog) : SLC30A9 (solute carrier family 30 member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc30a9 (solute carrier family 30 member 9)
Sus scrofa (pig) : SLC30A9 (solute carrier family 30 member 9)
Chlorocebus sabaeus (African green monkey) : SLC30A9 (solute carrier family 30 member 9)
Heterocephalus glaber (naked mole-rat) : Slc30a9 (solute carrier family 30 member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01442,464,814 - 42,519,760 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1442,465,807 - 42,520,020 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01442,260,670 - 42,315,608 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41443,423,677 - 43,477,106 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1439,971,799 - 40,024,874 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc30a9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1593180
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.