Coatc15 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Coatc15 (Coat color QTL 15) Rattus norvegicus

Symbol: Coatc15
Name: Coat color QTL 15
RGD ID: 10755459
Trait: coat/hair pigmentation trait   (VT:0010463)    
Measurement Type: pigmented ventral coat/hair area to total ventral coat/hair area ratio   (CMO:0001812)    
LOD Score: LRS=8.2
P Value: 0.01681
Variance: 5.0
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21419,836,944 - 64,836,944RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01421,457,565 - 66,457,565RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01421,276,795 - 66,276,795RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41422,520,291 - 67,520,291RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: AR-Ednrbsl/Hkv LEH/Hkv 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
AR-Ednrbsl/Hkv  (IEA)
LEH/Hkv  (IEA)

References

References - curated
# Reference Title Reference Citation
1. QTL analysis of modifiers for pigmentary disorder in rats carrying Ednrb(sl) mutations. Huang J, etal., Sci Rep. 2016 Jan 22;6:19697. doi: 10.1038/srep19697.
Related QTLs

Related QTL Description Reference
Coatc10 interacts with RGD:10755346


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41041616LOC120096859U4 spliceosomal RNA141985066119850849Rat
3954Vcsa2variable coding sequence A2141985123219857697Rat
11434380LOC108352824SMR1 protein-like141990080819909091Rat
1563299Smr3asubmaxillary gland androgen regulated protein 3A142005377920059568Rat
1597129Ppid-ps14peptidylprolyl isomerase D, pseudogene 14142009065620093812Rat
620592Cabs1calcium binding protein, spermatid associated 1142009696220099024Rat
41256287LOC120096584uncharacterized LOC120096584142013075920172275Rat
61990Csn3casein kappa142015403220160585Rat
1359468Fdcspfollicular dendritic cell secreted protein142016969120173983Rat
1561883Odamodontogenic, ameloblast associated142019328620202517Rat
11446409LOC108352727uncharacterized LOC108352727142019566120214723Rat
1309071Dzip1-ps1DAZ interacting protein 1, pseudogene 1142022723420229292Rat
1310384Prr27proline rich 27142023275720248617Rat
628794Csn1s2bcasein alpha s2-like B142025025720266377Rat
621152Csn1s2acasein alpha s2-like A142028116720295232Rat
1589974Stathstatherin142030732420311182Rat
61981Csn2casein beta142032258120329818Rat
2430Csn1s1casein alpha s1142034362020359614Rat
1562394Rpl30-ps7ribosomal protein L30, pseudogene 7142038186220382205Rat
11380862LOC108352728uncharacterized LOC108352728142039739320404391Rat
41273802LOC120096585uncharacterized LOC120096585142040441720406946Rat
3776Sult1e1sulfotransferase family 1E member 1142042232420439562Rat
620491Sult1d1sulfotransferase family 1D, member 1142044113520476341Rat
708534Sult1b1sulfotransferase family 1B member 1142049276320505491Rat
69432Ugt2a1UDP glucuronosyltransferase family 2 member A1142052101820545934Rat
1308444Ugt2a3UDP glucuronosyltransferase family 2 member A3142057279320590795Rat
41221305LOC120096588uncharacterized LOC120096588142059933820650775Rat
41043845Kbtbd8-ps1kelch repeat and BTB domain containing 8, pseudogene 1142061325720620826Rat
3936Ugt2bUDP glycosyltransferase 2 family, polypeptide B142063057220665062Rat
41382898LOC120096589uncharacterized LOC120096589142066552120675111Rat
41360123LOC120096590uncharacterized LOC120096590142067519020682835Rat
1595834Kbtbd8-ps2kelch repeat and BTB domain containing 8, pseudogene 2142068833320695396Rat
2321603Ugt2b-ps1UDP glycosyltransferase 2 family, polypeptide B, pseudogene 1142071753520739142Rat
41155403Ugt2b17-ps1UDP glucuronosyltransferase family 2 member B17, pseudogene 1142074059920745728Rat
628623Ugt2b15UDP glucuronosyltransferase family 2 member B15142076801520783599Rat
41189227LOC120096526UDP-glucuronosyltransferase 2B17-like142080250220807337Rat
3937Ugt2b37UDP-glucuronosyltransferase 2 family, member 37142081728520833917Rat
620895Ugt2b35UDP glucuronosyltransferase 2 family, polypeptide B35142085344120891039Rat
708417Ugt2b7UDP glucuronosyltransferase family 2 member B7142089668220919604Rat
1588690Ugt2b7l1UDP glucuronosyltransferase family 2 member B7 like 1142094444920955564Rat
6496885Hnrnpa1-ps40heterogeneous nuclear ribonucleoprotein A1, pseudogene 40142096235220965420Rat
2321083Ppial4dpeptidylprolyl isomerase A (cyclophilin A)-like 4D142100652221007284Rat
708541Ugt2b1UDP glucuronosyltransferase 2 family, polypeptide B1142102403521035784Rat
9195730Ugt2b4l-ps1UDP glucuronosyltransferase family 2 member B4 like, pseudogene 1142103826621042369Rat
1565664Ugt2b1l1UDP glucuronosyltransferase family 2 member B1 like 1142105672621082314Rat
1587539Arhgap11al1Rho GTPase activating protein 11A like 1142108834521089685Rat
1587531Hsp90aa1-ps3heat shock protein 90 alpha family class A member 1, pseudogene 3142110398421106561Rat
1309989Ugt2b10UDP glucuronosyltransferase 2 family, polypeptide B10142110799621128648Rat
1559459Ugt2b34l1UDP glucuronosyltransferase 2 family, polypeptide B34 like 1142114614021167706Rat
621706Ythdc1YTH N6-methyladenosine RNA binding protein C1142118543821215934Rat
11432687LOC108352729uncharacterized LOC108352729142121603021241866Rat
1561698Tmprss11etransmembrane serine protease 11E142128358721328203Rat
1587481Rpl23a-ps20ribosomal protein L23a, pseudogene 20142137904921379588Rat
1303278Tmprss11btransmembrane serine protease 11B142138393621407283Rat
40949944LOC120096866U6 spliceosomal RNA142139165121391757Rat
2321178Atp5mc2-ps2ATP synthase membrane subunit c locus 2, pseudogene 2142146267421463166Rat
1560675Tmprss11ftransmembrane serine protease 11F142149289621534792Rat
1306446Tmprss11gtransmembrane protease, serine 11G142154608721587258Rat
1596322Tmprss11atransmembrane serine protease 11A142162488121665284Rat
41182668LOC120096852U2 spliceosomal RNA142163718321637302Rat
620654Tmprss11dtransmembrane serine protease 11D142170733621769398Rat
1302967Tmprss11ctransmembrane protease, serine 11C142178207621840517Rat
9399075LOC103692776uncharacterized LOC103692776142180985621825718Rat
70513Gnrhrgonadotropin releasing hormone receptor142185687121874861Rat
1308324Uba6ubiquitin-like modifier activating enzyme 6142188403921947857Rat
1311584Stap1signal transducing adaptor family member 1142195046621981395Rat
41395196LOC120096806U1 spliceosomal RNA142197358221973761Rat
1303061Cenpccentromere protein C142198806722046732Rat
11497443Acta1-ps1actin, alpha 1, skeletal muscle, pseudogene 1142211410422114971Rat
41057074LOC120096753U1 spliceosomal RNA142224747522247636Rat
41134169LOC120096591uncharacterized LOC120096591142226463822347467Rat
2318302Smokl-ps6sperm motility kinase like, pseudogene 6142267773222682199Rat
41322366LOC120096527uncharacterized LOC120096527142300644523041321Rat
1585182Pgk1-ps10phosphoglycerate kinase 1, pseudogene 10142321415023215412Rat
2324510Dus4l-ps1dihydrouridine synthase 4-like, pseudogene 1142327997423280735Rat
2324321Mobp-ps1myelin-associated oligodendrocyte basic protein, pseudogene 1142350234823502821Rat
41296642LOC120096828U1 spliceosomal RNA142357271223572874Rat
1565048Rpl9l1ribosomal protein L9 like 1142364807023648731Rat
620831Epha5EPH receptor A5142365339324020129Rat
40988626LOC120096592uncharacterized LOC120096592142430608824337634Rat
41119499LOC120096819small nucleolar RNA SNORA17142437744624377574Rat
40986009LOC120096830small nucleolar RNA SNORA17142445330224453395Rat
1304608Tecrltrans-2,3-enoyl-CoA reductase-like142473224124805272Rat
41363359LOC120096750U6 spliceosomal RNA142532491125325017Rat
11503027LOC108352825protein transport protein Sec61 subunit gamma pseudogene142556696925655719Rat
7623930Zfp936l1zinc finger protein 936 like 1142569958225701112Rat
2324284Acer3-ps1alkaline ceramidase 3, pseudogene 1142572905125729730Rat
7513863LOC102546751uncharacterized LOC102546751142601753826019528Rat
41325492LOC120096723ferritin light chain 1-like142605035526050863Rat
11438225LOC108352732uncharacterized LOC108352732142621490926225971Rat
620836Adgrl3adhesion G protein-coupled receptor L3142633632027104060Rat
11405419LOC108352841uncharacterized LOC108352841142647842326487525Rat
11456987LOC108352849small nuclear ribonucleoprotein G pseudogene142763159327632651Rat
40950797LOC120096528uncharacterized LOC120096528142765058027663108Rat
41154061LOC120096593uncharacterized LOC120096593142792582727940488Rat
41062143LOC120096755U6 spliceosomal RNA142809365428093760Rat
41179800LOC120096787small nucleolar RNA SNORA13142831380228313928Rat
41038991LOC120096781small nucleolar RNA SNORD113/SNORD114 family142836562528365700Rat
41151227LOC120096857U4 spliceosomal RNA142925528129255363Rat
41398362LOC120096810small nucleolar RNA SNORA17142942757529427704Rat
1597019Ipo7-ps2importin 7, pseudogene 2142948016729483689Rat
41092069Trnap-ggg10transfer RNA proline (anticodon GGG) 10142989397029894044Rat
1561589Btf3l5basic transcription factor 3-like 5143000513830006045Rat
11375302LOC108352734uncharacterized LOC108352734143039064930402623Rat
41091691LOC120096812small nucleolar RNA SNORA17143047591730476044Rat
7690127LOC102551339uncharacterized LOC102551339143049803330624872Rat
41074429LOC120096874U6 spliceosomal RNA143054888330548989Rat
1306201Igfbp7insulin-like growth factor binding protein 7143073741430797317Rat
41374531LOC120096730uncharacterized LOC120096730143075052230755635Rat
41280434Rangrf-ps3RAN guanine nucleotide release factor, pseudogene 3143075131230753398Rat
9201561Rpl39-ps12ribosomal protein L39, pseudogene 12143075806730758425Rat
11438234Trnac-gca38transfer RNA cysteine (anticodon GCA) 38143075871030758781Rat
41094989LOC120096729uncharacterized LOC120096729143077506730780888Rat
1309477Polr2bRNA polymerase II subunit B143079722830834916Rat
1359460Noa1nitric oxide associated 1143083526430851294Rat
621069RestRE1-silencing transcription factor143085910930879828Rat
7498730LOC102551532uncharacterized LOC102551532143089262630894920Rat
41111789LOC120096875U6 spliceosomal RNA143096060030960706Rat
1302956Spink2serine peptidase inhibitor, Kazal type 2143096768230974326Rat
11432042LOC108352735uncharacterized LOC108352735143097803930982711Rat
41396352LOC120096731uncharacterized LOC120096731143098967430995959Rat
7684935LOC102551595uncharacterized LOC102551595143101355731025555Rat
621841HopxHOP homeobox143105591231082909Rat
40947943LOC120096732uncharacterized LOC120096732143105623431060971Rat
41219020LOC120096733uncharacterized LOC120096733143107643331077597Rat
1562571Spmap2lsperm microtubule associated protein 2 like143111010431152487Rat
1303337Arl9ADP-ribosylation factor like GTPase 9143115757331166803Rat
41335138LOC120096735uncharacterized LOC120096735143116489631171639Rat
1564787Srp72signal recognition particle 72143116817531195717Rat
40961482LOC120096737uncharacterized LOC120096737143119032931195581Rat
620066Paicsphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase143119908631232731Rat
620237Ppatphosphoribosyl pyrophosphate amidotransferase143121574131250144Rat
7632687LOC102552854uncharacterized LOC102552854143124780131255151Rat
1311135Aasdhaminoadipate-semialdehyde dehydrogenase143125501931281802Rat
1311575Cracdcapping protein inhibiting regulator of actin dynamics143128406631520103Rat
41313716LOC120096736uncharacterized LOC120096736143131369431338837Rat
40932403Rpl23a-ps19ribosomal protein L23a, pseudogene 19143143224731432742Rat
1310726Cep135centrosomal protein 135143153053831595812Rat
40943998Cep135l1centrosomal protein 135 like 1143159528931623397Rat
1304939Exoc1exocyst complex component 1143161153631659920Rat
1591303Exoc1lexocyst complex component 1 like143167346531698175Rat
7520032LOC102556008uncharacterized LOC102556008143175176431829013Rat
68388Nmuneuromedin U143184456431872196Rat
1559712Pdcl2phosducin-like 2143187456331895265Rat
41027913LOC120096594uncharacterized LOC120096594143188221031884883Rat
620271Clockclock circadian regulator143190854231992673Rat
11355448LOC108352740uncharacterized LOC108352740143195842231975843Rat
1306983Tmem165transmembrane protein 165143199348932018717Rat
1308828Srd5a3steroid 5 alpha-reductase 3143204640832060796Rat
2965Kdrkinase insert domain receptor143221787132261018Rat
41345606LOC120096529uncharacterized LOC120096529143235515232357606Rat
620568KitKIT proto-oncogene receptor tyrosine kinase143254745932624694Rat
1598162Snrpd2-ps1small nuclear ribonucleoprotein D2 polypeptide, pseudogene 1143263628032636653Rat
41110000LOC120096756U6 spliceosomal RNA143263823932638343Rat
41234281LOC120096530uncharacterized LOC120096530143274985732751927Rat
41059665Ndufa5-ps3NADH:ubiquinone oxidoreductase subunit A5, pseudogene 3143294983932950212Rat
3284Pdgfraplatelet derived growth factor receptor alpha143300583833054347Rat
1308047Gsx2GS homeobox 2143312379933126151Rat
7501116Rbbp4-ps3RB binding protein 4, chromatin remodeling factor, pseudogene 3143315264933153949Rat
1309278Chic2cysteine-rich hydrophobic domain 2143315766933192015Rat
41344346LOC120096595uncharacterized LOC120096595143327727833278438Rat
1308159Lnx1ligand of numb-protein X 1143351442933617086Rat
1309336Fip1l1factor interacting with PAPOLA and CPSF1143361521033675742Rat
1562708Scfd2sec1 family domain containing 2143368334834008232Rat
41230065LOC120096744U6 spliceosomal RNA143394732233947428Rat
1303099Rasl11bRAS-like family 11 member B143401492434019146Rat
40997259LOC120096596uncharacterized LOC120096596143402127934025049Rat
7540659LOC102554412uncharacterized LOC102554412143404969034058012Rat
6489076Dancrdifferentiation antagonizing non-protein coding RNA143412695634127936Rat
41244228Snora26small nucleolar RNA, H/ACA box 26143412764034127760Rat
1564808Usp46ubiquitin specific peptidase 46143415005534219227Rat
7564466LOC102554514uncharacterized LOC102554514143416173934171159Rat
1597128Wbp11-ps2WW domain binding protein 11, pseudogene 2143429733934299886Rat
2322951Ubbl1ubiquitin B like 1143431294934313236Rat
11362928LOC108352851uncharacterized LOC108352851143433385834338439Rat
11387368LOC108352742uncharacterized LOC108352742143442022134447174Rat
735208Spata18spermatogenesis associated 18143453193134558671Rat
9438180LOC103692822uncharacterized LOC103692822143456039134563548Rat
1594202Sgcbsarcoglycan, beta143456361434578614Rat
1306094Lrrc66leucine rich repeat containing 66143457893434604977Rat
1310422Dcun1d4defective in cullin neddylation 1 domain containing 4143465272334733122Rat
1310958Cwh43cell wall biogenesis 43 C-terminal homolog143475427934800530Rat
2323837Eif5-ps2eukaryotic translation initiation factor 5, pseudogene 2143481029534812256Rat
41292566LOC120096532uncharacterized LOC120096532143484139934843213Rat
2319541Ociad2OCIA domain containing 2143487366834889276Rat
1359549Ociad1OCIA domain containing 1143489785134915291Rat
1311309FrylFRY like transcription coactivator143495662335189738Rat
727972Zar1zygote arrest 1143519344635197382Rat
1309536Slc10a4solute carrier family 10, member 4143519814935203863Rat
40990623Trnah-aug2transfer RNA histidin (anticodon AUG) 2143520503235205104Rat
1311593Slain2SLAIN motif family, member 2143523603435314186Rat
1592953Gpx4-ps3glutathione peroxidase 4, pseudogene 3143533811035338759Rat
620973Tectec protein tyrosine kinase143535255135461585Rat
41255002LOC120096597uncharacterized LOC120096597143540854835410632Rat
1306481TxkTXK tyrosine kinase143546336935519448Rat
1310092Nipal1NIPA-like domain containing 1143553764135561656Rat
621815Cnga1cyclic nucleotide gated channel subunit alpha 1143556694735605065Rat
1359201Nfxl1nuclear transcription factor, X-box binding-like 1143562608635667505Rat
727887Corincorin, serine peptidase143568060135910703Rat
1592952Anp32a-ps2acidic nuclear phosphoprotein 32 family member A, pseudogene 2143579579935798154Rat
7714547LOC102550273synaptonemal complex central element protein 2-like143580073535802489Rat
1588541Atp10dATPase phospholipid transporting 10D (putative)143591172836012549Rat
11508820LOC10835274340S ribosomal protein S2 pseudogene143593582335936668Rat
41029313Myl6-ps3myosin light chain 6, pseudogene 3143602148036043186Rat
1305402Commd8COMM domain containing 8143604904036059617Rat
2649Gabrb1gamma-aminobutyric acid type A receptor subunit beta1143606872536548946Rat
40997548LOC120096598uncharacterized LOC120096598143612390036162244Rat
1333995Or6c66g-ps1olfactory receptor family 6 subfamily C member 66G, pseudogene 1143627382136274693Rat
621670Gabra4gamma-aminobutyric acid type A receptor subunit alpha 4143659078236667724Rat
2319120Cox7b2cytochrome c oxidase subunit 7B2143669312036805323Rat
41131698Trnav-aac20transfer RNA valine (anticodon AAC) 20143696361536963687Rat
41089551LOC120096599uncharacterized LOC120096599143709156937096980Rat
61856Gabra2gamma-aminobutyric acid type A receptor subunit alpha 2143709725137230030Rat
621732Gabrg1gamma-aminobutyric acid type A receptor subunit gamma 1143739621737469606Rat
41070370LOC120096752U6 spliceosomal RNA143764334437643450Rat
40995005LOC120096743U6 spliceosomal RNA143769257737692683Rat
41386864LOC120096772U7 small nuclear RNA143795682137956881Rat
40926311LOC120096533uncharacterized LOC120096533143804510538050006Rat
41347535LOC120096823small nucleolar RNA SNORA17143847900538479130Rat
41044971LOC120096534uncharacterized LOC120096534143848770738491128Rat
1305521Gnpda2glucosamine-6-phosphate deaminase 2143852066338538713Rat
1310774Guf1GTP binding elongation factor GUF1143853795338557331Rat
1310766Yipf7Yip1 domain family, member 7143857104538599070Rat
41216070LOC120096807small nucleolar RNA SNORA17143861569838615827Rat
1312020Kctd8potassium channel tetramerization domain containing 8143877327439018182Rat
41176151Rpl7-ps23ribosomal protein L7, pseudogene 23143878280338783597Rat
1594181Hspd1-ps4heat shock protein family D (Hsp60) member 1, pseudogene 4143897226638974496Rat
1561787Acat2-ps2acetyl-CoA acetyltransferase 2, pseudogene 2143915989139161654Rat
41328132LOC120096600uncharacterized LOC120096600143943346339437629Rat
41073061LOC120096811small nucleolar RNA SNORA17143961071539610842Rat
1565933Rtraf-ps2RNA transcription, translation and transport factor, pseudogene 2143974522239791427Rat
41144709LOC120096601uncharacterized LOC120096601143974936039763419Rat
9198670LOC103692836uncharacterized LOC103692836143976352839775762Rat
41299431LOC120096796small nucleolar RNA SNORA48143980705839807196Rat
1586204Hspd1-ps2heat shock protein family D (Hsp60) member 1, pseudogene 2143995257739954795Rat
1564635Grxcr1glutaredoxin and cysteine rich domain containing 1144000416940126571Rat
41243425LOC120096602uncharacterized LOC120096602144023267440243612Rat
1309619Atp8a1ATPase phospholipid transporting 8A1144031501340557572Rat
7504244LOC102547308uncharacterized LOC102547308144034595840348826Rat
41279334LOC120096603uncharacterized LOC120096603144035952540364571Rat
1565710Shisa3shisa family member 3144056367240568244Rat
41086856LOC120096535uncharacterized LOC120096535144060294640608991Rat
7621128LOC102547499uncharacterized LOC102547499144061905740622769Rat
11378147LOC108352744glyceraldehyde-3-phosphate dehydrogenase pseudogene144063372140634794Rat
41339146LOC120096604uncharacterized LOC120096604144070047440717094Rat
11440419LOC108352745uncharacterized LOC108352745144071725840752979Rat
1584735Bend4BEN domain containing 4144075304840788686Rat
11512407LOC108352852glyceraldehyde-3-phosphate dehydrogenase pseudogene144080916940810344Rat
1593180Slc30a9solute carrier family 30 member 9144081628440870992Rat
708371Tmem33transmembrane protein 33144088848540910715Rat
1560582Phox2bpaired-like homeobox 2b144106601241069202Rat
1305269Limch1LIM and calponin homology domains 1144111257941425001Rat
41251030LOC120096605uncharacterized LOC120096605144125597041257155Rat
41396064LOC120096849U2 spliceosomal RNA144130747441307627Rat
3928Uchl1ubiquitin C-terminal hydrolase L1144148503141495590Rat
40944653LOC120096871U6 spliceosomal RNA144149731241497418Rat
1562438Apbb2amyloid beta precursor protein binding family B member 2144155791841878622Rat
1310137Nsun7NOP2/Sun RNA methyltransferase family member 7144187856241935238Rat
41300422LOC120096757U6 spliceosomal RNA144204096842041072Rat
1563570Rps23l1ribosomal protein S23 like 1144204574942046255Rat
41135427LOC120096606uncharacterized LOC120096606144204813142054952Rat
1359713Rbm47RNA binding motif protein 47144205329042191572Rat
621534Chrna9cholinergic receptor nicotinic alpha 9 subunit144223521842241939Rat
1598004Haus8-ps3HAUS augmin-like complex, subunit 8, pseudogene 3144232338442323749Rat
1307623Rhohras homolog family member H144234113542371971Rat
1565738N4bp2NEDD4 binding protein 2144234269042479861Rat
1307094Pds5aPDS5 cohesin associated factor A144255165342651074Rat
41034751LOC120096749U6 spliceosomal RNA144259026142590365Rat
1590581Rpl14l1ribosomal protein L14 like 1144259403942594681Rat
1311626Ube2kubiquitin-conjugating enzyme E2K144265801642718899Rat
2324107Rplp2l1ribosomal protein lateral stalk subunit P2 like 1144274528042745734Rat
1311122Smim14small integral membrane protein 14144278336142829762Rat
621879UgdhUDP-glucose 6-dehydrogenase144284870442872351Rat
1307270Liaslipoic acid synthetase144287669942893824Rat
62049Rpl9ribosomal protein L9144289394542897140Rat
1308227Klbklotho beta144289905042950788Rat
2322187Rpl32l1ribosomal protein L32 like 1144294633342946852Rat
11373177LOC10835282840S ribosomal protein S13 pseudogene144295228842952858Rat
620619Rfc1replication factor C subunit 1144296627943041372Rat
41233454LOC120096833small nucleolar RNA SNORA77144299189242992020Rat
1306997Wdr19WD repeat domain 19144304247443106337Rat
1584389Hnrnpa1-ps12heterogeneous nuclear ribonucleoprotein A1, pseudogene 12144312916643130555Rat
6496349Slc25a51l1solute carrier family 25, member 51 like 1144314091043144124Rat
1309661Klhl5kelch-like family member 5144314425443206192Rat
7561511LOC102556650uncharacterized LOC102556650144318871143202471Rat
1562424Tmem156transmembrane protein 156144322146443252453Rat
1560201Fam114a1family with sequence similarity 114, member A1144327569343346154Rat
11439749LOC108352749uncharacterized LOC108352749144330262343323885Rat
1303030Tlr6toll-like receptor 6144336216443374500Rat
1309975Tlr1toll-like receptor 1144338412743396765Rat
1311569Tlr10toll-like receptor 10144340084343414056Rat
1593290Klf3KLF transcription factor 3144347476743505801Rat
41321355LOC120096746U6 spliceosomal RNA144354501143545117Rat
9104957LOC103692863uncharacterized LOC103692863144365875243660819Rat
4888551Mir328bmicroRNA 328b144366306843663185Rat
1566409Rpl29-ps23ribosomal protein L29, pseudogene 23144370726243707901Rat
7668188LOC102552762uncharacterized LOC102552762144372910643734358Rat
41159606LOC120096607uncharacterized LOC120096607144385977043878152Rat
1304562Tbc1d1TBC1 domain family member 1144393682044135133Rat
41099168LOC120096610uncharacterized LOC120096610144396978643970591Rat
41319905LOC120096609uncharacterized LOC120096609144406034644065175Rat
41166496LOC120096608uncharacterized LOC120096608144406715344069117Rat
41378422LOC120096822small nucleolar RNA SNORA17144414919344149324Rat
1306061Pgm2phosphoglucomutase 2144416631444199828Rat
41128148LOC120096845U2 spliceosomal RNA144420861644208784Rat
41069626LOC120096800small nucleolar RNA SNORA17144427774844277879Rat
1597718Styx-ps2serine/threonine/tyrosine interacting protein, pseudogene 2144428672744287397Rat
6492244LOC100911506uncharacterized LOC100911506144431539744318610Rat
1307468Rell1RELT-like 1144431864044378541Rat
1561612C14h4orf19similar to human chromosome 4 open reading frame 19144438738644478344Rat
1563065Nwd2NACHT and WD repeat domain containing 2144448004944671417Rat
1593179NBR1l1autophagy cargo receptor like 1144479125344793245Rat
41096908LOC120096844U2 spliceosomal RNA144484790744848101Rat
11361894LOC108352853glyceraldehyde-3-phosphate dehydrogenase pseudogene144503481945035853Rat
1309563Slc25a52solute carrier family 25, member 52144539645445398337Rat
41191145LOC120096759U6 spliceosomal RNA144547900745479109Rat
1595096Wdr82-ps2WD repeat domain 82, pseudogene 2144580766245808729Rat
1595055Lin9-ps1lin-9 DREAM MuvB core complex component, pseudogene 1144587754745880236Rat
1596919Wdr82-ps1WD repeat domain 82, pseudogene 1144620044246349977Rat
41003067LOC120096870U6 spliceosomal RNA144648489546485001Rat
1587839Tra2b-ps1transformer 2 beta, pseudogene 1144660261946605408Rat
2323176Dthd1death domain containing 1144667043846673183Rat
1306452Arap2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2144671765746917326Rat
41185834LOC120096846U2 spliceosomal RNA144690207046902222Rat
41023908LOC120096816small nucleolar RNA SNORA17144698782146987951Rat
1595890Actr2-ps1actin related protein 2, pseudogene 1144747096747472050Rat
41189851LOC120096611uncharacterized LOC120096611144791473147929659Rat
7641928LOC102548364uncharacterized LOC102548364144871382948716195Rat
6486870Nsa2-ps6NSA2 ribosome biogenesis factor, pseudogene 6144875970148769350Rat
11443889Hmgb3l1high mobility group box 3 like 1144914941549150197Rat
41008038LOC120096826small nucleolar RNA SNORA17144940536949405490Rat
1587622Rpl7-ps6ribosomal protein L7, pseudogene 6144941213449412891Rat
41165825LOC120096754U6 spliceosomal RNA144968495449685056Rat
41118704LOC120096872U6 spliceosomal RNA145033007150330177Rat
11478268LOC108352854dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like145045859650458890Rat
1566292Ube2i-ps1ubiquitin-conjugating enzyme E2I, pseudogene 1145050730250507808Rat
1586202Senp2-ps6SUMO specific peptidase 2, pseudogene 6145080444650806452Rat
41266703LOC120096514endogenous retrovirus group K member 6 Gag polyprotein-like145087663650916929Rat
1589992Cox7a2l2cytochrome c oxidase subunit VIIa polypeptide 2-like 2145130116951301612Rat
1563725C1galt1c1-ps1C1GALT1-specific chaperone 1, pseudogene 1145145932551460537Rat
41239410LOC120096612uncharacterized LOC120096612145156829551570088Rat
41051904LOC120096536uncharacterized LOC120096536145158754151598334Rat
2316380Vom1r-ps103vomeronasal 1 receptor pseudogene 103145166190851662607Rat
1588879Mfap1a-ps3microfibrillar-associated protein 1A, pseudogene 3145184823651849369Rat
1303209Pcdh7protocadherin 7145247180152901696Rat
40926625Rpl9-ps23ribosomal protein L9, pseudogene 23145270794852712379Rat
7645018LOC102549643uncharacterized LOC102549643145292914352930478Rat
7678464LOC102549744uncharacterized LOC102549744145293083552933116Rat
41392624Dnaja3-ps1DnaJ heat shock protein family (Hsp40) member A3, pseudogene 1145324997353358181Rat
41209678LOC120096829small nucleolar RNA SNORA17145358107953581212Rat
1587649Esd-ps4esterase D, pseudogene 4145360483253605978Rat
41212442LOC120096827small nucleolar RNA SNORA17145404088054040999Rat
41096139LOC120096848U2 spliceosomal RNA145448406554484191Rat
41362307LOC120096855U4 spliceosomal RNA145463594154636079Rat
41216713LOC120096851U2 spliceosomal RNA145472054654720639Rat
1586201Dnmt3a-ps1DNA methyltransferase 3 alpha, pseudogene 1145476836554770941Rat
2325120Prr32-ps1proline rich 32, pseudogene 1145484626454854869Rat
41257153Cops8-ps3COP9 signalosome subunit 8, pseudogene 2145576474855765405Rat
41359523Rps2-ps20ribosomal protein S2, pseudogene 20145593262755934118Rat
40999201LOC120096738U6 spliceosomal RNA145629855156298654Rat
1562755Rpl23al1ribosomal protein L23A like 1145656623856572088Rat
41217372Cfl1-ps6cofilin 1, pseudogene 6145674964356750117Rat
1304641Stim2stromal interaction molecule 2145687842857004405Rat
41116190LOC120096843U2 spliceosomal RNA145695727456957478Rat
1304958Tbc1d19TBC1 domain family, member 19145708430557200221Rat
40957555LOC120096614uncharacterized LOC120096614145724686657262591Rat
2289Cckarcholecystokinin A receptor145729239757300747Rat
7543920LOC102552214uncharacterized LOC102552214145732206057326658Rat
1593096Rbpjrecombination signal binding protein for immunoglobulin kappa J region145733849357523330Rat
2320504LOC10036125960S ribosomal protein L13-like145763235857633066Rat
1565192Smim20small integral membrane protein 20145771130457722681Rat
1562860Sel1l3SEL1L family member 3145777551557882076Rat
620889Slc34a2solute carrier family 34 member 2145791093157930236Rat
41233465LOC120096615uncharacterized LOC120096615145793043557947798Rat
11459947LOC108352756uncharacterized LOC108352756145800334958013825Rat
2320358Eif4e2-ps1eukaryotic translation initiation factor 4E family member 2, pseudogene 1145807814558079340Rat
1306572Anapc4anaphase promoting complex subunit 4145812599558159253Rat
1311414Zcchc4zinc finger CCHC-type containing 4145816546758207071Rat
1359515Pi4k2bphosphatidylinositol 4-kinase type 2 beta145822179058248716Rat
1589491SepsecsSep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase145831148458341745Rat
7627395LOC102552822uncharacterized LOC102552822145834457958368002Rat
1310391Lgi2leucine-rich repeat LGI family, member 2145841596558443450Rat
9279922Rpsal1ribosomal protein SA like 1145846651958467175Rat
1582968Ccdc149coiled-coil domain containing 149145850958358605017Rat
3733Sod3superoxide dismutase 3145861010458615845Rat
40926627LOC120096780small nucleolar RNA SNORA70145863795558638086Rat
11368675LOC108352757uncharacterized LOC108352757145876965958787020Rat
1308072Dhx15DEAH-box helicase 15145878714758825083Rat
620925Ppargc1aPPARG coactivator 1 alpha145886075259516525Rat
40938133Rpl36-ps6ribosomal protein L36, pseudogene145887752058916595Rat
1596185Hmgn1-ps6high mobility group nucleosome binding domain 1, pseudogene 6146003031060030603Rat
41126556LOC120096850U2 spliceosomal RNA146032993260330000Rat
41338044LOC120096616uncharacterized LOC120096616146041493160427292Rat
2322459Rbsn-ps1rabenosyn, RAB effector, pseudogene 1146054946060551655Rat
1309539Gba3glucosylceramidase beta 3146057497460721411Rat
41212480Cycs-ps3cytochrome c, somatic, pseudogene 3146071556760715921Rat
1304914Adgra3adhesion G protein-coupled receptor A3146087471960976341Rat
1597121Lgals9-ps2galectin 9, pseudogene 2146110879861109838Rat
1565332Ifitm3-ps1interferon induced transmembrane protein3, pseudogene 1146123326961233688Rat
708539Kcnip4potassium voltage-gated channel interacting protein 4146138069962531399Rat
41210570LOC120096504uncharacterized LOC120096504146140677661426196Rat
41124397Cct6a-ps18chaperonin containing TCP1 subunit 6A, pseudogene 18146155191261553037Rat
7688150Dkc1-ps1dyskerin pseudouridine synthase 1, pseudogene 1146222866462230195Rat
1597120Eef1a1-ps20eukaryotic translation elongation factor 1 alpha 1, pseudogene 20146231418462315751Rat
1311045Pacrglparkin coregulated like146253201962556977Rat
69310Slit2slit guidance ligand 2146261633762955934Rat
2325375Mir218-1microRNA 218-1146270975962709868Rat
4888549Mir3565microRNA 3565146270975962709872Rat
1594761Rps3a-ps11ribosomal protein S3a, pseudogene 11146309404163094488Rat
9114441LOC10369315940S ribosomal protein S6 pseudogene146311098463111679Rat
1593175Aldh9a1-ps1aldehyde dehydrogenase 9 family, member A1, pseudogene 1146339676463403072Rat
41273649LOC120096617uncharacterized LOC120096617146427546364291626Rat
11516851LOC108352762uncharacterized LOC108352762146445666364539882Rat
41106175LOC120096771U7 small nuclear RNA146479395964794021Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
738055D14Hmgc4247141984801919848266Ratregion
11482D14Wox13194141984803919848270Ratregion
11483D14Wox17141985879219859003Ratregion
11482D14Wox13194141985881119859012Ratregion
5064422BI302173206141990277019902977Ratregion
5042652RH129562210142032860420329657Ratregion
45165D14Got29133142034430420344439Ratregion
67231D14Arb18128142036015820360286Ratregion
1630530D14Wox31290142042160720421896Ratregion
42002D14Arb6300142043920720439526Ratregion
1635397D14Wox19142043937820439524Ratregion
5030321BE105744151142047497320475124Ratregion
5075520RH138641144142050521120505355Ratregion
5039814RH127922217142065173020651948Ratregion
5051392AI118071132142083348420833616Ratregion
7205986Ppia150142100663421006784Ratregion
5501679UniSTS:265677293142100676521007058Ratregion
5502847Arhgap11a0142108931021090044Ratregion
5071242RH134969216142112829721128513Ratregion
5070640RH134619193142116727821167471Ratregion
39598D14Rat81202142119949321199724Ratregion
5060098BF388492135142120298421203119Ratregion
41990D14Arb16120142121750821217635Ratregion
5069748AU029143134142124033421240463Ratregion
66577D14Mco8210142128638821286593Ratregion
5027147WI-17713156142130128821301444Ratregion
60763D14Wox3191142137954621379735Ratregion
738057D14Hmgc5198142177574021775938Ratregion
5052863RH142317154142185529221855446Ratregion
5044388RH1305740142187680321876981Ratregion
5074204RH137881177142194461921944796Ratregion
5025002BB446153103142194468521944788Ratregion
5032909RH136935183142195577521955958Ratregion
502794338.MMHAP88FLE5.seq158142229442622294584Ratregion
66697D14Uia4227142250750422507731Ratregion
36520D14Rat7168142283307822833252Ratregion
5066546AU048293120142294107822941198Ratregion
5038904RH127399220142294759422947813Ratregion
5504885ha3026130142314500623145136Ratregion
5505835UniSTS:495883239142365344823653687Ratregion
5046618RH131857220142365497323655193Ratregion
738061D14Hmgc6155142368553923685694Ratregion
738061D14Hmgc6155142368553923685855Ratregion
738061D14Hmgc6155142368557123685694Ratregion
5060344AW531504177142394885223949029Ratregion
5501720UniSTS:266988152142400776024007912Ratregion
5060436BE110064167142401834524018512Ratregion
5028253D4Mit35368142416042724160495Ratregion
45167D14Got32197142443885524439049Ratregion
40104D14Rat99237142453123024531477Ratregion
39138D14Rat50232142541088525411143Ratregion
39174D14Rat55219142565635625656577Ratregion
45166D14Got33254142565639825656652Ratregion
5068754AU046952108142569577425695884Ratregion
5061502BE105338153142636484226364995Ratregion
5055895RH144064138142637447926374617Ratregion
5063608BE107836151142657432826574479Ratregion
5062074BF397398134142658280026582934Ratregion
38486D14Rat41140142658520526585343Ratregion
5046174RH131601187142663297726633164Ratregion
5054207RH143092126142688107626881202Ratregion
5033467RH138942129142706719327067322Ratregion
45187D14Got35119142746395527464076Ratregion
5068852AU046886238142766790127668139Ratregion
43015D14Rat116146142766793827668085Ratregion
45169D14Got38253142772958727729840Ratregion
45171D14Got37176142798495727985134Ratregion
34890D14Rat9130142803506828035204Ratregion
6484684D14Uwm13214142811832128118535Ratregion
40930D14Rat82211142820319428203397Ratregion
45170D14Got36122142820683028206952Ratregion
5068612AU047039231142860733028607561Ratregion
5068144AU047322140142925392429254064Ratregion
5090713AU049919211143027977830279989Ratregion
5063246BI301575193143028753430287727Ratregion
35342D14Rat8132143032009230320216Ratregion
45172D14Got39139143038862130388760Ratregion
45173D14Got89263143051866230518925Ratregion
5068594AU047051192143062556730625759Ratregion
38932D14Rat36145143076702530767156Ratregion
5032815RH135403185143079371230793897Ratregion
5076506RH139215174143080232330803044Ratregion
5049354RH133432196143085094730851143Ratregion
5025000AU022345228143085095930851187Ratregion
5064708BE108365173143086088730861060Ratregion
5036007PMC84675P1646143086409030864736Ratregion
34965D14Rat10176143088377730883947Ratregion
5089313AU049082185143096738430967569Ratregion
5087052BM389183198143097044330970641Ratregion
40712D14Rat83228143107177431072011Ratregion
5061610AA875648157143108270331082860Ratregion
37124D14Rat14200143115335031153547Ratregion
5058916BF387243175143115763031157805Ratregion
5063528BF404311215143115763031157845Ratregion
5059036BF393957130143119704031197170Ratregion
5079304RH140904220143119911531199335Ratregion
5042422RH129425157143119920331199360Ratregion
5025326RH127888187143119920331199390Ratregion
5087552PMC312758P2177143121618331216360Ratregion
5034153RH141568200143124966031249860Ratregion
5028261D5Mit306241143127548831275729Ratregion
5047302RH132249203143128426431284467Ratregion
5079916RH141277216143128626631286482Ratregion
5060272AW531051184143131534231315526Ratregion
5082669BE119975196143160720431607400Ratregion
5043696RH130174169143161159431611763Ratregion
6484686D14Uwm14262143161416631614428Ratregion
5060674BE098844183143162111131621298Ratregion
5049398RH133458184143163101631631200Ratregion
5064532BF399306173143163963431639807Ratregion
5068996AU046793201143167580331676008Ratregion
43016D14Rat117126143168038331680527Ratregion
6480636D14Uwm1140143170701131707201Ratregion
5049012RH133235189143193026831930457Ratregion
6484239D14Uwm7240143195765831957909Ratregion
5073510RH137478213143197412031974333Ratregion
5501508D14S2921064143197739531978459Ratregion
5053471RH142668209143198651731986726Ratregion
5083621BI276488217143198877431988991Ratregion
5063820AW535324176143198891731989093Ratregion
5506931G54151167143198999231990159Ratregion
5070678RH134641193143198999531990188Ratregion
5062002AI454088144143199234531992489Ratregion
5039990RH128025187143199364731993834Ratregion
5049172RH133327185143204654732046732Ratregion
45175D14Got41128143210261632102744Ratregion
41790D14Rat106245143220763432207871Ratregion
5088395AU048544264143223407932234343Ratregion
5040966RH128586219143226062532260844Ratregion
5051757RH94641171143226081232260983Ratregion
6484241D14Uwm8300143237430032374766Ratregion
6484241D14Uwm8300143237447032374766Ratregion
6480643D14Uwm4240143247190232472125Ratregion
41018D14Rat84115143247312332473250Ratregion
5506047UniSTS:498239426143254805132548477Ratregion
35465D14Rat13125143258323832583345Ratregion
6484243D14Uwm9210143275661332756819Ratregion
1630300D14Got101124143275666532756789Ratregion
5037051RH36296127143287500032875127Ratregion
45176D14Got40244143289876132899005Ratregion
6484245D14Uwm10220143293431632934528Ratregion
37136D14Rat105237143295352432953740Ratregion
5032119RH94451156143300612933006285Ratregion
5052273M84607174143300869233008866Ratregion
1628668D14Wox20184143305582933056013Ratregion
6484247D14Uwm11190143309750833097688Ratregion
5070496Gsh2282143312583533126117Ratregion
33772D14Mit3100143333435333334448Ratregion
5029311RH144316158143342901033429168Ratregion
5068886AU046864229143348525133485483Ratregion
6484235D14Uwm5190143351459933514760Ratregion
6480641D14Uwm3298143354871033549008Ratregion
6484237D14Uwm6389143355010433550483Ratregion
5073424RH137428208143355625033556459Ratregion
5070644RH134622198143359637633596574Ratregion
5044648RH130724209143361474133614950Ratregion
5046540RH131812216143361609333616655Ratregion
5072396RH136825250143361791533618780Ratregion
6480638D14Uwm2220143367787733678087Ratregion
5507634UniSTS:1426321417143377449733775914Ratregion
5063562BI289920104143394297733943081Ratregion
45177D14Got42253143397854533978795Ratregion
5061240BE111373150143401749534017645Ratregion
38408D14Rat65129143404961034049719Ratregion
5071926RH135365189143414740834147597Ratregion
5058692BE102309169143416396234164131Ratregion
5076638RH139292133143419425934194392Ratregion
5083705AI009635205143421680934217014Ratregion
5044458RH130614194143421746334217656Ratregion
5055055RH143580112143421894734219059Ratregion
5058012BF386462187143430156234301749Ratregion
5089937AU049453267143438734934387616Ratregion
45174D14Got43134143439149434391628Ratregion
5026864RH133820209143452947534529684Ratregion
5028867RH142631195143455675434556950Ratregion
5048048RH132678203143457748934577692Ratregion
5051092RH134435206143457828734578493Ratregion
5073034RH137196180143465279134652971Ratregion
5033487RH139013127143470433934704466Ratregion
5060204AI072690192143472051534720707Ratregion
5078170RH140184216143475428834754504Ratregion
1641546D14Got102197143482371234823909Ratregion
39042D14Rat52135143482377234823917Ratregion
5047962RH132629191143489787634898067Ratregion
5027293AW557942109143489789934898008Ratregion
5063652BE107907170143498865034988820Ratregion
60064D14Got45126143501109535011221Ratregion
625820D14Got90190143515928435159474Ratregion
5028793RH142349150143519009635190246Ratregion
5078284RH140250197143523705735237254Ratregion
5505030Gpx40143533811235338614Ratregion
5033017RH137289187143533843335338615Ratregion
5055823RH144023264143540996635410230Ratregion
60063D14Got44153143544203235442185Ratregion
5080036RH141346180143546115835461338Ratregion
5088989AU048888125143549544735495572Ratregion
5052961RH142374164143551629635516460Ratregion
1634903D14Got119193143552646435526657Ratregion
5046420RH131742191143553787935538070Ratregion
5052857RH142314174143558940035590305Ratregion
5072036RH135428197143560468335604880Ratregion
5080096RH141380200143562784435628044Ratregion
5071492RH135113180143591041835910597Ratregion
5499885UniSTS:235197252143591178135912033Ratregion
5041690RH129002187143591184835912035Ratregion
5026810RH133620216143605920436059420Ratregion
5054117RH143040134143607093836071072Ratregion
5051769RH94648153143608041236080565Ratregion
5502881Gabrb1693143608043536081128Ratregion
5051627U14418107143608060636080713Ratregion
738058D14Hmgc7216143626908236269300Ratregion
5507632D5Buc331172143660493536606107Ratregion
5056341RH144322172143666746336667635Ratregion
5076000RH138919164143668587636686040Ratregion
5033279RH138249164143680509536805259Ratregion
5065316BE121426203143709332737093530Ratregion
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33692D14Mit12140143766971937669857Ratregion
45184D14Got55118143848665038486768Ratregion
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5025774RH129612213143853845238538665Ratregion
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45183D14Got54273143889819738898470Ratregion
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45182D14Got52157143904498239045139Ratregion
35713D14Rat11172143905723739057404Ratregion
36287D14Rat12153143915358139153750Ratregion
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38984D14Rat31223144047624040476463Ratregion
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5054015RH142981172144048142640481597Ratregion
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5075796RH138802158144111374041113898Ratregion
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5032567SHGC-6820792144111495941115051Ratregion
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5499507stSG6026120144183496141836169Ratregion
34102D14Mgh5150144187102241871196Ratregion
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5501169PMC151834P1403144223562742236030Ratregion
35319D14Rat16190144226252942262698Ratregion
11030D14Mit4139144233688142337007Ratregion
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35202D14Rat24125144246809742468199Ratregion
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5044130RH130427214144278460442784818Ratregion
5499883UniSTS:235187232144278772142787953Ratregion
5053545RH142711123144279130942791432Ratregion
5052933RH142358191144282946142829652Ratregion
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5034207RH141772218144347809843478316Ratregion
5036388Klf3181144347848843478669Ratregion
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37798D14Rat48241144378408443784333Ratregion
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43019D14Rat120136144442838044428522Ratregion
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60065D14Got46179144470466544704844Ratregion
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39826D14Rat85229144518481245185033Ratregion
37638D14Rat46204144579270845792904Ratregion
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37638D14Rat46204144673111146731319Ratregion
39064D14Rat35207144682196846822171Ratregion
5052601RH125883240144747011747470363Ratregion
1637473D14Got143141144762483847624979Ratregion
33989D14Mit13147144782261847822765Ratregion
1634733D14Got153218144790196347902181Ratregion
1631182D14Got114177144790225647902433Ratregion
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5068690AU046992289144926514949265438Ratregion
37044D14Rat86294144940781649408114Ratregion
44552D9Wox21136145112941751129474Ratregion
5039308RH127632209145130118851301397Ratregion
5090351AU049699245145204172152041966Ratregion
5025594RH128923205145247326952473474Ratregion
5025648RH1291230145247500152475161Ratregion
5065148BE121006160145253619952536359Ratregion
34045D14Mit8137145276462552764770Ratregion
5029789BE102626150145278765252787802Ratregion
1633849D14Got111197145286265652862853Ratregion
1640178D14Got110115145286275252862867Ratregion
5054085RH143022165145288928152889446Ratregion
5502713PCDH7194145290007052900264Ratregion
1638764D14Got105266145357512253575388Ratregion
5068064AU047369187145401253454012721Ratregion
5505048Dnmt3a127145476956454769691Ratregion
36998D14Rat17161145491852854918692Ratregion
5051613AW21463191145548565255485731Ratregion
1629535D14Got107293145626871656269173Ratregion
1629535D14Got107293145626888056269173Ratregion
5077978RH140071220145662818656628404Ratregion
5068976AU046806196145672965256729848Ratregion
1631781D14Got115137145676166256761799Ratregion
41866D14Rat119106145676168356761795Ratregion
5499693Stim1347145687846256878809Ratregion
5499881UniSTS:235180233145687874956878982Ratregion
5086873BM387514163145693397856934141Ratregion
5086873BM387514163145693397856934200Ratregion
505218518.mHAa3b6.seq165145708020457080369Ratregion
505219724.MMHAP56FRH9.seq158145717780757177965Ratregion
5053023RH142409193145728682457287017Ratregion
1633817D14Wox24145729207957292360Ratregion
5501053PMC129753P2132145729339257293524Ratregion
1640850D14Wox25145729387057293950Ratregion
1632772D14Wox26206145729466457294870Ratregion
5505118Cckar990145730056157301551Ratregion
5052343X17459158145734210557342263Ratregion
5503650UniSTS:465469545145734278857343333Ratregion
1640416D14Got163140145737890857379048Ratregion
40392D14Rat107145145741041457410553Ratregion
5045662RH131307195145771143457711630Ratregion
5055297RH143720249145771144857711697Ratregion
5060004BF400256182145778858657788768Ratregion
5039808RH127919188145791062257910810Ratregion
5050136RH133883215145791102057911235Ratregion
38238D14Rat58160145798016657980332Ratregion
1636696D14Got109193145802477958024972Ratregion
43021D14Rat122204145812587258126077Ratregion
5080818RH141800185145822195658222141Ratregion
5035294BM386109152145833673758336891Ratregion
5045154RH131015190145834140258341592Ratregion
1632817D14Got151192145844019458440386Ratregion
5069658AU046356127145859437958594506Ratregion
5054091RH143025115145860400758604122Ratregion
5046570RH131829199145860463158604830Ratregion
5089515AU049201251145872338958723638Ratregion
5502709DHX15175145882454258824717Ratregion
1629607D14Got112273145883682158837091Ratregion
1632114D14Got155216145887366058873876Ratregion
5057714BF386065159145924459359244752Ratregion
5066882AU048095135145939292059393055Ratregion
5506332MARC_49176-49177:1118326844:1485145949569759496182Ratregion
5503544PPARGC1A__5755891145951564359516534Ratregion
43018D14Rat140149145970728059707409Ratregion
738064D14Hmgc8225145979441959794646Ratregion
43023D14Rat124200146030219560302424Ratregion
1632534D14Got116277146030220360302480Ratregion
5045638RH131292185146057511860575303Ratregion
5090407AU049732175146093021960930394Ratregion
5070704RH134656180146095844560958625Ratregion
5078630RH140456182146097587260976054Ratregion
5075010RH138347248146140076861401015Ratregion
5046096RH131556181146140211961402300Ratregion
5063182BE113856199146141757161417770Ratregion
1630243D14Got108184146151290161513087Ratregion
5086681BE115263160146166859961668759Ratregion
5056741RH144553152146167528561675437Ratregion
1631619D14Got137292146168656461686856Ratregion
5064192BE114195150146181037661810526Ratregion
5073956RH137736157146194922861949385Ratregion
5074472RH138036225146200108162001306Ratregion
1632967D14Got104138146214531662145449Ratregion
41050D14Rat87230146235281562353037Ratregion
5061328BE099631154146253255862532712Ratregion
5070756RH134686190146261791562618105Ratregion
5066114BE116869164146291271362912877Ratregion
1634956D14Got156129146292150162921630Ratregion
37230D14Rat64215146361897163619178Ratregion
5090741AU049935290146362954963629839Ratregion
5068328AU047212100146372035563720455Ratregion
37426D14Rat62215146381613763816358Ratregion
1640391D14Got117240146428016764280407Ratregion
502795943.MMHAP27FRG10.seq178146447658064476758Ratregion
37328D14Rat61248146448149264481734Ratregion
5031738AU047315273146456861264568884Ratregion
5071650RH135205211146466005964660270Ratregion
Position Markers

Peak: (D14Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21442,336,881 - 42,337,007 (+)MAPPER
Rnor_6.01443,957,503 - 43,957,628NCBI
Rnor_5.01443,776,512 - 43,776,637UniSTS
Rnor_5.01443,776,512 - 43,777,078UniSTS
RGSC_v3.41445,020,228 - 45,020,354RGD
RGSC_v3.41445,020,229 - 45,020,354UniSTS
RGSC_v3.11444,925,389 - 44,925,828RGD
Celera1441,490,248 - 41,490,386UniSTS
RH 2.0 Map14466.1RGD
FHH x ACI Map1439.47RGD
Cytogenetic Map14p11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141487516830883947Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: Map Maker QTXb20 10755346
qtl_general number of animals used: 149 F2 animals 10755346
qtl_general measurement method: Dorsal and ventral sides were photographed and pigmented and non-pigmented areas traced manually; percentage of pigmented area calculated (pigmented area/total area X 100) for dorsal, ventral and total body surface 10755346