Acat2-ps2 (acetyl-CoA acetyltransferase 2, pseudogene 2) - Rat Genome Database

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Gene: Acat2-ps2 (acetyl-CoA acetyltransferase 2, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Acat2-ps2
Name: acetyl-CoA acetyltransferase 2, pseudogene 2
RGD ID: 1561787
Description: INTERACTS WITH tetrachloromethane
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC364149; LOC680852; RGD1561787; similar to Ab2-076; similar to acetyl-Coenzyme A acetyltransferase 2
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81439,513,823 - 39,515,586 (+)NCBIGRCr8
mRatBN7.21439,159,891 - 39,161,654 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01461,775,143 - 61,776,906 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01461,878,345 - 61,880,108 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41441,713,733 - 41,715,497 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1438,352,692 - 38,354,455 (+)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

Genomics

Variants

.
Variants in Acat2-ps2
14 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-15809 BioCyc
NCBI Gene 364149 ENTREZGENE
PhenoGen Acat2-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Acat2-ps2  acetyl-CoA acetyltransferase 2, pseudogene 2  RGD1561787  similar to Ab2-076  Symbol and Name Changed 1299863 APPROVED
2015-07-29 RGD1561787  similar to Ab2-076  LOC680852  similar to acetyl-Coenzyme A acetyltransferase 2  Data merged from RGD:1587031 737654 PROVISIONAL
2008-04-30 RGD1561787  similar to Ab2-076   RGD1561787_predicted  similar to Ab2-076 (predicted)  'predicted' is removed 2292626 APPROVED
2008-01-09 LOC680852  similar to acetyl-Coenzyme A acetyltransferase 2  LOC687204  similar to acetyl-Coenzyme A acetyltransferase 2  Data merged from RGD:1587773 1643240 APPROVED
2006-11-19 LOC680852  similar to acetyl-Coenzyme A acetyltransferase 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC687204  similar to acetyl-Coenzyme A acetyltransferase 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-07 RGD1561787_predicted  similar to Ab2-076 (predicted)  LOC364149  similar to Ab2-076  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC364149  similar to Ab2-076      Symbol and Name status set to provisional 70820 PROVISIONAL