Pia20 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Pia20 (Pristane induced arthritis QTL 20) Rattus norvegicus

Symbol: Pia20
Name: Pristane induced arthritis QTL 20
RGD ID: 731183
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 3.55
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2149,088,978 - 39,057,237RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01410,729,268 - 61,873,323RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01410,676,655 - 61,976,011RGDRnor5.0
RGSC_v3.41410,340,377 - 41,608,939RGDRGSC3.4
RGSC_v3.11410,340,272 - 41,611,330RGD
Cross Type: backcross
Strains Crossed: DA.E3-(D14Wox8-D14Rat64)/Rhd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
pristane  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Chronicity of pristane-induced arthritis in rats is controlled by genes on chromosome 14. Wester L, etal., J Autoimmun 2003 Dec;21(4):305-13.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1302952Cops4COP9 signalosome subunit 41490785799108788Rat
7693155LOC102550950uncharacterized LOC1025509501491117879129680Rat
1311361Lin54lin-54 DREAM MuvB core complex component1491297759188244Rat
6492538LOC100911553uncharacterized LOC1009115531492006749210222Rat
620233Sec31aSEC31 homolog A, COPII coat complex component1492143249269281Rat
40984079Trnas-aga37transfer RNA serine (anticodon AGA) 371492754089275482Rat
7557650LOC102551078uncharacterized LOC1025510781493163059318560Rat
11416112LOC108352711uncharacterized LOC1083527111493288859338581Rat
1306105Tmem150ctransmembrane protein 150C1494549999525300Rat
1309016Enoph1enolase-phosphatase 11495313369557797Rat
1309950Hnrnpdlheterogeneous nuclear ribonucleoprotein D-like1495574309563659Rat
620365Hnrnpdheterogeneous nuclear ribonucleoprotein D1496153759638975Rat
7709406Vamp9vesicle-associated membrane protein 91496441099681254Rat
41282244LOC120096741U6 spliceosomal RNA1496989929699096Rat
1562073Rps17-ps12ribosomal protein S17, pseudogene 121497083189708725Rat
41192184LOC120096568uncharacterized LOC1200965681498135049816468Rat
1562220Rasgef1bRasGEF domain family, member 1B14985951210380044Rat
1587357Eef2-ps3eukaryotic translation elongation factor 2, pseudogene 3141002522710030201Rat
11371099LOC108352713uncharacterized LOC108352713141006120910062206Rat
41378313LOC120096569uncharacterized LOC120096569141021805710223168Rat
40980577LOC120096570uncharacterized LOC120096570141022585310229996Rat
41248860Prelid1-ps4PRELI domain containing 1, pseudogene 4141048205110482698Rat
3401Prkg2protein kinase cGMP-dependent 2141055988210668479Rat
2212Bmp3bone morphogenetic protein 3141071248910737153Rat
1597725Cfap299cilia and flagella associated protein 299141078719111272894Rat
41268253LOC120096815small nucleolar RNA SNORA17141103643411036565Rat
7681103Rps3a-ps3ribosomal protein S3a, pseudogene 3141106594811071780Rat
11368116LOC108352715glyceraldehyde-3-phosphate dehydrogenase pseudogene141124784411248900Rat
620129Fgf5fibroblast growth factor 5141132382711346164Rat
1311628Prdm8PR/SET domain 8141140320211424059Rat
1561294Antxr2ANTXR cell adhesion molecule 2141154171811682110Rat
41369409LOC120096868U6 spliceosomal RNA141202668912026795Rat
41335052LOC120096509uncharacterized LOC120096509141205730812060933Rat
1303263Gk2glycerol kinase 2141210707112108923Rat
7702016LOC102554702uncharacterized LOC102554702141213389912183562Rat
1564723Naa11N(alpha)-acetyltransferase 11, NatA catalytic subunit141218365112193687Rat
7576947LOC102554768uncharacterized LOC102554768141229429512307954Rat
11423634Rps19l5ribosomal protein S19 like 5141233474612375603Rat
40981411LOC120096760U6 spliceosomal RNA141245608412456190Rat
1310426Paqr3progestin and adipoQ receptor family member 3141246256812484999Rat
1564828Bmp2kBMP-2 inducible kinase141248119412579411Rat
41195182LOC120096864U4 spliceosomal RNA141255384212553982Rat
11472470LOC108352846uncharacterized LOC108352846141262703812627824Rat
41158177LOC120096572uncharacterized LOC120096572141265225512661089Rat
41362457LOC120096842U2 spliceosomal RNA141267594512676137Rat
2119Anxa3annexin A3141272770812781717Rat
1306516Fras1Fraser extracellular matrix complex subunit 1141279140713200862Rat
9201570LOC103693729uncharacterized LOC103693729141319853813202957Rat
41363895LOC120096573uncharacterized LOC120096573141326036313281692Rat
1306850Mrpl1mitochondrial ribosomal protein L1141330052213359654Rat
1309128Cnot6lCCR4-NOT transcription complex, subunit 6-like141341049913502511Rat
41230670LOC120096853U2 spliceosomal RNA141342550313425629Rat
1564256Cxcl13C-X-C motif chemokine ligand 13141360889413613965Rat
11357449Pramef20-ps1PRAME family member 20, pseudogene 1141375017913752838Rat
6503293Pramel36l1PRAME like 36 like 1141376429913767174Rat
1562423Pramef20-ps2PRAME family member 20, pseudogene 2141377142613774085Rat
1565660Pramel36PRAME like 36141379059613793232Rat
41183035LOC120096510oogenesin-1-like141380317313805847Rat
6502517Oog1-ps2oogenesin 1, pseudogene 2141382541713830446Rat
1590186Pramel34PRAME like 34141385005713852806Rat
1559654Pramef8l2PRAME family member 8 like 2141391514913922618Rat
6501942Rrs1-ps6ribosome biogenesis regulator 1 homolog, pseudogene 6141394717013948293Rat
1561226Pramef8l1PRAME family member 8 like 1141401319814015825Rat
41119288Pramel53l1PRAMEL 53 like 1141402964214032337Rat
1591399Pramef8-ps1PRAME family member 8, pseudogene 1141404520614047856Rat
1561699Pramef20l1PRAME family member 20 like 1141405856014061218Rat
1587867Pramef8-ps2PRAME family member 8, pseudogene 2141412255514131850Rat
1561977Pramel38PRAME like 38141416592814168560Rat
6500970LOC100909936putative PRAME family member 24-like141442043414423091Rat
1562932Pramef8l3PRAME family member 8 like 3141445846714461102Rat
2323210Pramel38l1PRAME like 38 like 1141451052614513196Rat
40982470N4bp1-ps3Nedd4 binding protein 1, pseudogene 3141453412514535345Rat
40933861N4bp1-ps4Nedd4 binding protein 1, pseudogene 4141454139914542619Rat
40942266N4bp1-ps5Nedd4 binding protein 1, pseudogene 5141454870014549920Rat
41118678LOC120096720NEDD4-binding protein 1-like141455595814557059Rat
1597011pramef20-ps3PRAME family member 20, pseudogene 3141457668614579328Rat
6499239Pramel53PRAME like 53141458906914591723Rat
41328344LOC120096511PRAME family member 8-like141466067714663400Rat
7639242Pramel38l2PRAME like 38 like 2141471592214718579Rat
2321706Rps3-ps2ribosomal protein S3, pseudogene 2141475597114756630Rat
1305002Ccng2cyclin G2141480432114812819Rat
1307405Septin11septin 11141484475914990856Rat
1309209Ccnicyclin I141487969814902510Rat
41375215LOC120096779small nucleolar RNA SNORA70141500957415009708Rat
1311994Sowahbsosondowah ankyrin repeat domain family member B141502920315033038Rat
1310470Shroom3shroom family member 3141509941515396832Rat
11377841LOC10835271960S ribosomal protein L12 pseudogene141521672215217306Rat
11361880LOC108352720uncharacterized LOC108352720141525594615263468Rat
1308523Ccdc158coiled-coil domain containing 158141541117815468579Rat
41098044LOC120096575uncharacterized LOC120096575141543651015439033Rat
1311800Stbd1starch binding domain 1141547045215473857Rat
1585459Fam47efamily with sequence similarity 47, member E141548553715521599Rat
9371121Ybx1-ps3Y box binding protein 1, pseudogene 3141550416115505736Rat
621882Scarb2scavenger receptor class B, member 2141555827115609813Rat
619926Nup54nucleoporin 54141561763015636029Rat
41265197LOC120096791small Cajal body-specific RNA 4141562251715622646Rat
628833Art3ADP-ribosyltransferase 3141563723015719442Rat
41097334Cwf19l1-ps1CWF19 like cell cycle control factor 1, pseudogene 1141568179415689181Rat
727827Cxcl11C-X-C motif chemokine ligand 11141568943215692207Rat
620209Cxcl10C-X-C motif chemokine ligand 10141570477215706969Rat
628798Cxcl9C-X-C motif chemokine ligand 9141572286815727779Rat
1359112Sdad1SDA1 domain containing 1141574148915768271Rat
41288113LOC120096834U6atac minor spliceosomal RNA141575059415750708Rat
1307267NaaaN-acylethanolamine acid amidase141577730615796411Rat
1307093Ppef2protein phosphatase with EF-hand domain 2141579741415831620Rat
40949163LOC120096576uncharacterized LOC120096576141581014015814669Rat
621604Uso1USO1 vesicle transport factor141586663815932185Rat
1309571G3bp2G3BP stress granule assembly factor 2141593240316020555Rat
41378079LOC120096837small nucleolar RNA U13141596638315966493Rat
41008131Lamtor2-ps1late endosomal/lysosomal adaptor, MAPK and MTOR activator 2, pseudogene 1141596783615968234Rat
41335342LOC120096578uncharacterized LOC120096578141600897916028574Rat
41120328Scarna23l2small Cajal body-specific RNA 23 like 2141601655616016682Rat
1309625Cdkl2cyclin dependent kinase like 2141602738116063257Rat
41155602Sec61g-ps2Sec61 translocon subunit gamma, pseudogene 2141604012616042214Rat
6489816Odaphodontogenesis associated phosphoprotein141607183516080151Rat
1310094Thap6THAP domain containing 6141609291916113528Rat
1359180Rchy1ring finger and CHY zinc finger domain containing 1141611326316129017Rat
7496786LOC102546535uncharacterized LOC102546535141613716416153244Rat
41094695LOC120096581oogenesin-3-like141630545616306013Rat
708342Parm1prostate androgen-regulated mucin-like protein 1141646830916577339Rat
41404100LOC120096579uncharacterized LOC120096579141651140116643441Rat
41057597LOC120096580uncharacterized LOC120096580141665340216669293Rat
41102643LOC120096799small nucleolar RNA SNORA48141667595116676080Rat
620275Btcbetacellulin141670844716746961Rat
2149Aregamphiregulin141697218516981443Rat
620299Eregepiregulin141702728717041062Rat
1560084Epgnepithelial mitogen141707677417084806Rat
1310879Mthfd2lmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like141708994717170036Rat
70069Cxcl2C-X-C motif chemokine ligand 2141718103017183075Rat
619869Cxcl1C-X-C motif chemokine ligand 1141719336417195143Rat
1587388Eno1-ps24enolase 1, pseudogene 24141723383917238216Rat
621812Cxcl3C-X-C motif chemokine ligand 3141728772717289451Rat
7618949LOC102549742uncharacterized LOC102549742141729471617295743Rat
3305Pf4platelet factor 4141729830417299220Rat
70548Ppbppro-platelet basic protein141730232617303130Rat
11375289LOC108352723uncharacterized LOC108352723141730476017307239Rat
708540Cxcl6C-X-C motif chemokine ligand 6141731079017312250Rat
41115972LOC120093066uncharacterized LOC120093066141733898417370314Rat
41126636LOC120096747U6 spliceosomal RNA141742200317422114Rat
1566082Rassf6Ras association domain family member 6141743332817473565Rat
1561929Albfm1albumin superfamily member 1141747815917525047Rat
41271520LOC120096582uncharacterized LOC120096582141748290017529510Rat
628614Afmafamin141753102217563868Rat
2065Afpalpha-fetoprotein141757341217591476Rat
2085Albalbumin141760739717622814Rat
1597130Rpl8-ps4ribosomal protein L8, pseudogene 4141769362617694361Rat
1562348Ankrd17ankyrin repeat domain 17141772323917861841Rat
1559547Cox18cytochrome c oxidase assembly factor COX18141786458117877483Rat
41281688LOC120096803small nucleolar RNA SNORA17141816018618160317Rat
1310750Adamts3ADAM metallopeptidase with thrombospondin type 1, motif 3141823112818437771Rat
41227516LOC120096802small nucleolar RNA SNORA17141828413118284262Rat
41015304LOC120096809small nucleolar RNA SNORA17141839961018399737Rat
620168Npffr2neuropeptide FF receptor 2141851312018558074Rat
2667GcGC, vitamin D binding protein141863214618667563Rat
40949335Srp19-ps1signal recognition particle 19, pseudogene 1141876858218769192Rat
68936Slc4a4solute carrier family 4 member 4141884128919293297Rat
620667Dckdeoxycytidine kinase141930521819326247Rat
1305114Mob1bMOB kinase activator 1B141933305819365845Rat
1310858Grsf1G-rich RNA sequence binding factor 1141941294419429364Rat
1565242Rufy3RUN and FYVE domain containing 3141943153019506476Rat
7489037Mir6321microRNA 6321141945931719459457Rat
1308540Utp3UTP3, small subunit processome component141951571619517370Rat
1561381Mgst3l1microsomal glutathione S-transferase 3 like 1141952550919526128Rat
1310155Jchainjoining chain of multimeric IgA and IgM141953892719547023Rat
1306796Enamenamelin141955672919581433Rat
2101Ambnameloblastin141960176119614382Rat
40975998LOC120096832small nucleolar RNA SNORA76141963029219630423Rat
1592356Amtnamelotin141964862419661181Rat
620983Oprpnopiorphin prepropeptide141970253519717550Rat
3953Smr3bsubmaxillary gland androgen regulated protein 3B141978381519788557Rat
41041616LOC120096859U4 spliceosomal RNA141985066119850849Rat
3954Vcsa2variable coding sequence A2141985123219857697Rat
11434380LOC108352824SMR1 protein-like141990080819909091Rat
1563299Smr3asubmaxillary gland androgen regulated protein 3A142005377920059568Rat
1597129Ppid-ps14peptidylprolyl isomerase D, pseudogene 14142009065620093812Rat
620592Cabs1calcium binding protein, spermatid associated 1142009696220099024Rat
41256287LOC120096584uncharacterized LOC120096584142013075920172275Rat
61990Csn3casein kappa142015403220160585Rat
1359468Fdcspfollicular dendritic cell secreted protein142016969120173983Rat
1561883Odamodontogenic, ameloblast associated142019328620202517Rat
11446409LOC108352727uncharacterized LOC108352727142019566120214723Rat
1309071Dzip1-ps1DAZ interacting protein 1, pseudogene 1142022723420229292Rat
1310384Prr27proline rich 27142023275720248617Rat
628794Csn1s2bcasein alpha s2-like B142025025720266377Rat
621152Csn1s2acasein alpha s2-like A142028116720295232Rat
1589974Stathstatherin142030732420311182Rat
61981Csn2casein beta142032258120329818Rat
2430Csn1s1casein alpha s1142034362020359614Rat
1562394Rpl30-ps7ribosomal protein L30, pseudogene 7142038186220382205Rat
41273802LOC120096585uncharacterized LOC120096585142040441720406946Rat
3776Sult1e1sulfotransferase family 1E member 1142042232420439562Rat
620491Sult1d1sulfotransferase family 1D, member 1142044113520476341Rat
708534Sult1b1sulfotransferase family 1B member 1142049276320505491Rat
69432Ugt2a1UDP glucuronosyltransferase family 2 member A1142052101820545934Rat
1308444Ugt2a3UDP glucuronosyltransferase family 2 member A3142057279320590795Rat
41221305LOC120096588uncharacterized LOC120096588142059933820650775Rat
3936Ugt2bUDP glycosyltransferase 2 family, polypeptide B142063057220665062Rat
41360123LOC120096590uncharacterized LOC120096590142067519020682835Rat
1595834Kbtbd8-ps2kelch repeat and BTB domain containing 8, pseudogene 2142068833320695396Rat
2321603Ugt2b-ps1UDP glycosyltransferase 2 family, polypeptide B, pseudogene 1142071753520739142Rat
41155403Ugt2b17-ps1UDP glucuronosyltransferase family 2 member B17, pseudogene 1142074059920745728Rat
628623Ugt2b15UDP glucuronosyltransferase family 2 member B15142076801520783599Rat
41189227LOC120096526UDP-glucuronosyltransferase 2B17-like142080250220807337Rat
3937Ugt2b37UDP-glucuronosyltransferase 2 family, member 37142081728520833917Rat
620895Ugt2b35UDP glucuronosyltransferase 2 family, polypeptide B35142085344120891039Rat
708417Ugt2b7UDP glucuronosyltransferase family 2 member B7142089668220919604Rat
1588690Ugt2b7l1UDP glucuronosyltransferase family 2 member B7 like 1142094444920955564Rat
2321083Ppial4dpeptidylprolyl isomerase A (cyclophilin A)-like 4D142100652221007284Rat
708541Ugt2b1UDP glucuronosyltransferase 2 family, polypeptide B1142102403521035784Rat
1587539Arhgap11al1Rho GTPase activating protein 11A like 1142108834521089685Rat
1587531Hsp90aa1-ps3heat shock protein 90 alpha family class A member 1, pseudogene 3142110398421106561Rat
1309989Ugt2b10UDP glucuronosyltransferase 2 family, polypeptide B10142110799621128648Rat
1559459Ugt2b34l1UDP glucuronosyltransferase 2 family, polypeptide B34 like 1142114614021167706Rat
621706Ythdc1YTH N6-methyladenosine RNA binding protein C1142118543821215934Rat
1561698Tmprss11etransmembrane serine protease 11E142128358721328203Rat
1587481Rpl23a-ps20ribosomal protein L23a, pseudogene 20142137904921379588Rat
1303278Tmprss11btransmembrane serine protease 11B142138393621407283Rat
40949944LOC120096866U6 spliceosomal RNA142139165121391757Rat
2321178Atp5mc2-ps2ATP synthase membrane subunit c locus 2, pseudogene 2142146267421463166Rat
1560675Tmprss11ftransmembrane serine protease 11F142149289621534792Rat
1306446Tmprss11gtransmembrane protease, serine 11G142154608721587258Rat
1596322Tmprss11atransmembrane serine protease 11A142162488121665284Rat
41182668LOC120096852U2 spliceosomal RNA142163718321637302Rat
620654Tmprss11dtransmembrane serine protease 11D142170733621769398Rat
1302967Tmprss11ctransmembrane protease, serine 11C142178207621840517Rat
9399075LOC103692776uncharacterized LOC103692776142180985621825718Rat
70513Gnrhrgonadotropin releasing hormone receptor142185687121874861Rat
1308324Uba6ubiquitin-like modifier activating enzyme 6142188403921947857Rat
1311584Stap1signal transducing adaptor family member 1142195046621981395Rat
1303061Cenpccentromere protein C142198806722046732Rat
11497443Acta1-ps1actin, alpha 1, skeletal muscle, pseudogene 1142211410422114971Rat
41057074LOC120096753U1 spliceosomal RNA142224747522247636Rat
2318302Smokl-ps6sperm motility kinase like, pseudogene 6142267773222682199Rat
41322366LOC120096527uncharacterized LOC120096527142300644523041321Rat
1585182Pgk1-ps10phosphoglycerate kinase 1, pseudogene 10142321415023215412Rat
2324510Dus4l-ps1dihydrouridine synthase 4-like, pseudogene 1142327997423280735Rat
2324321Mobp-ps1myelin-associated oligodendrocyte basic protein, pseudogene 1142350234823502821Rat
1565048Rpl9l1ribosomal protein L9 like 1142364807023648731Rat
620831Epha5EPH receptor A5142365339324020129Rat
40988626LOC120096592uncharacterized LOC120096592142430608824337634Rat
41119499LOC120096819small nucleolar RNA SNORA17142437744624377574Rat
40986009LOC120096830small nucleolar RNA SNORA17142445330224453395Rat
1304608Tecrltrans-2,3-enoyl-CoA reductase-like142473224124805272Rat
41363359LOC120096750U6 spliceosomal RNA142532491125325017Rat
11503027LOC108352825protein transport protein Sec61 subunit gamma pseudogene142556696925655719Rat
7623930Zfp936l1zinc finger protein 936 like 1142569958225701112Rat
2324284Acer3-ps1alkaline ceramidase 3, pseudogene 1142572905125729730Rat
7513863LOC102546751uncharacterized LOC102546751142601753826019528Rat
41325492LOC120096723ferritin light chain 1-like142605035526050863Rat
11438225LOC108352732uncharacterized LOC108352732142621490926225971Rat
620836Adgrl3adhesion G protein-coupled receptor L3142633632027104060Rat
11405419LOC108352841uncharacterized LOC108352841142647842326487525Rat
11456987LOC108352849small nuclear ribonucleoprotein G pseudogene142763159327632651Rat
40950797LOC120096528uncharacterized LOC120096528142765058027663108Rat
41154061LOC120096593uncharacterized LOC120096593142792582727940488Rat
41062143LOC120096755U6 spliceosomal RNA142809365428093760Rat
41179800LOC120096787small nucleolar RNA SNORA13142831380228313928Rat
41038991LOC120096781small nucleolar RNA SNORD113/SNORD114 family142836562528365700Rat
41151227LOC120096857U4 spliceosomal RNA142925528129255363Rat
41398362LOC120096810small nucleolar RNA SNORA17142942757529427704Rat
1597019Ipo7-ps2importin 7, pseudogene 2142948016729483689Rat
41092069Trnap-ggg10transfer RNA proline (anticodon GGG) 10142989397029894044Rat
1561589Btf3l5basic transcription factor 3-like 5143000513830006045Rat
11375302LOC108352734uncharacterized LOC108352734143039064930402623Rat
41091691LOC120096812small nucleolar RNA SNORA17143047591730476044Rat
7690127LOC102551339uncharacterized LOC102551339143049803330624872Rat
41074429LOC120096874U6 spliceosomal RNA143054888330548989Rat
1306201Igfbp7insulin-like growth factor binding protein 7143073741430797317Rat
41280434Rangrf-ps3RAN guanine nucleotide release factor, pseudogene 3143075131230753398Rat
9201561Rpl39-ps12ribosomal protein L39, pseudogene 12143075806730758425Rat
11438234Trnac-gca38transfer RNA cysteine (anticodon GCA) 38143075871030758781Rat
41094989LOC120096729uncharacterized LOC120096729143077506730780888Rat
1309477Polr2bRNA polymerase II subunit B143079722830834916Rat
1359460Noa1nitric oxide associated 1143083526430851294Rat
621069RestRE1-silencing transcription factor143085910930879828Rat
7498730LOC102551532uncharacterized LOC102551532143089262630894920Rat
41111789LOC120096875U6 spliceosomal RNA143096060030960706Rat
1302956Spink2serine peptidase inhibitor, Kazal type 2143096768230974326Rat
11432042LOC108352735uncharacterized LOC108352735143097803930982711Rat
41396352LOC120096731uncharacterized LOC120096731143098967430995959Rat
7684935LOC102551595uncharacterized LOC102551595143101355731025555Rat
621841HopxHOP homeobox143105591231082909Rat
40947943LOC120096732uncharacterized LOC120096732143105623431060971Rat
41219020LOC120096733uncharacterized LOC120096733143107643331077597Rat
1562571Spmap2lsperm microtubule associated protein 2 like143111010431152487Rat
1303337Arl9ADP-ribosylation factor like GTPase 9143115757331166803Rat
41335138LOC120096735uncharacterized LOC120096735143116489631171639Rat
1564787Srp72signal recognition particle 72143116817531195717Rat
40961482LOC120096737uncharacterized LOC120096737143119032931195581Rat
620066Paicsphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase143119908631232731Rat
620237Ppatphosphoribosyl pyrophosphate amidotransferase143121574131250144Rat
1311135Aasdhaminoadipate-semialdehyde dehydrogenase143125501931281802Rat
1311575Cracdcapping protein inhibiting regulator of actin dynamics143128406631520103Rat
41313716LOC120096736uncharacterized LOC120096736143131369431338837Rat
40932403Rpl23a-ps19ribosomal protein L23a, pseudogene 19143143224731432742Rat
1310726Cep135centrosomal protein 135143153053831595812Rat
1304939Exoc1exocyst complex component 1143161153631659920Rat
1591303Exoc1lexocyst complex component 1 like143167346531698175Rat
7520032LOC102556008uncharacterized LOC102556008143175176431829013Rat
68388Nmuneuromedin U143184456431872196Rat
1559712Pdcl2phosducin-like 2143187456331895265Rat
41027913LOC120096594uncharacterized LOC120096594143188221031884883Rat
620271Clockclock circadian regulator143190854231992673Rat
11355448LOC108352740uncharacterized LOC108352740143195842231975843Rat
1306983Tmem165transmembrane protein 165143199348932018717Rat
1308828Srd5a3steroid 5 alpha-reductase 3143204640832060796Rat
2965Kdrkinase insert domain receptor143221787132261018Rat
41345606LOC120096529uncharacterized LOC120096529143235515232357606Rat
620568KitKIT proto-oncogene receptor tyrosine kinase143254745932624694Rat
1598162Snrpd2-ps1small nuclear ribonucleoprotein D2 polypeptide, pseudogene 1143263628032636653Rat
41110000LOC120096756U6 spliceosomal RNA143263823932638343Rat
41059665Ndufa5-ps3NADH:ubiquinone oxidoreductase subunit A5, pseudogene 3143294983932950212Rat
3284Pdgfraplatelet derived growth factor receptor alpha143300583833054347Rat
1308047Gsx2GS homeobox 2143312379933126151Rat
7501116Rbbp4-ps3RB binding protein 4, chromatin remodeling factor, pseudogene 3143315264933153949Rat
1309278Chic2cysteine-rich hydrophobic domain 2143315766933192015Rat
41344346LOC120096595uncharacterized LOC120096595143327727833278438Rat
1308159Lnx1ligand of numb-protein X 1143351442933617086Rat
1309336Fip1l1factor interacting with PAPOLA and CPSF1143361521033675742Rat
1562708Scfd2sec1 family domain containing 2143368334834008232Rat
41230065LOC120096744U6 spliceosomal RNA143394732233947428Rat
1303099Rasl11bRAS-like family 11 member B143401492434019146Rat
7540659LOC102554412uncharacterized LOC102554412143404969034058012Rat
6489076Dancrdifferentiation antagonizing non-protein coding RNA143412695634127936Rat
41244228Snora26small nucleolar RNA, H/ACA box 26143412764034127760Rat
1564808Usp46ubiquitin specific peptidase 46143415005534219227Rat
1597128Wbp11-ps2WW domain binding protein 11, pseudogene 2143429733934299886Rat
2322951Ubbl1ubiquitin B like 1143431294934313236Rat
11362928LOC108352851uncharacterized LOC108352851143433385834338439Rat
735208Spata18spermatogenesis associated 18143453193134558671Rat
1594202Sgcbsarcoglycan, beta143456361434578614Rat
1306094Lrrc66leucine rich repeat containing 66143457893434604977Rat
1310422Dcun1d4defective in cullin neddylation 1 domain containing 4143465272334733122Rat
1310958Cwh43cell wall biogenesis 43 C-terminal homolog143475427934800530Rat
2323837Eif5-ps2eukaryotic translation initiation factor 5, pseudogene 2143481029534812256Rat
41292566LOC120096532uncharacterized LOC120096532143484139934843213Rat
2319541Ociad2OCIA domain containing 2143487366834889276Rat
1359549Ociad1OCIA domain containing 1143489785134915291Rat
1311309FrylFRY like transcription coactivator143495662335189738Rat
727972Zar1zygote arrest 1143519344635197382Rat
1309536Slc10a4solute carrier family 10, member 4143519814935203863Rat
40990623Trnah-aug2transfer RNA histidin (anticodon AUG) 2143520503235205104Rat
1311593Slain2SLAIN motif family, member 2143523603435314186Rat
1592953Gpx4-ps3glutathione peroxidase 4, pseudogene 3143533811035338759Rat
620973Tectec protein tyrosine kinase143535255135461585Rat
1306481TxkTXK tyrosine kinase143546336935519448Rat
1310092Nipal1NIPA-like domain containing 1143553764135561656Rat
621815Cnga1cyclic nucleotide gated channel subunit alpha 1143556694735605065Rat
1359201Nfxl1nuclear transcription factor, X-box binding-like 1143562608635667505Rat
727887Corincorin, serine peptidase143568060135910703Rat
7714547LOC102550273synaptonemal complex central element protein 2-like143580073535802489Rat
1588541Atp10dATPase phospholipid transporting 10D (putative)143591172836012549Rat
11508820LOC10835274340S ribosomal protein S2 pseudogene143593582335936668Rat
41029313Myl6-ps3myosin light chain 6, pseudogene 3143602148036043186Rat
1305402Commd8COMM domain containing 8143604904036059617Rat
2649Gabrb1gamma-aminobutyric acid type A receptor subunit beta1143606872536548946Rat
1333995Or6c66g-ps1olfactory receptor family 6 subfamily C member 66G, pseudogene 1143627382136274693Rat
621670Gabra4gamma-aminobutyric acid type A receptor subunit alpha 4143659078236667724Rat
2319120Cox7b2cytochrome c oxidase subunit 7B2143669312036805323Rat
41131698Trnav-aac20transfer RNA valine (anticodon AAC) 20143696361536963687Rat
41089551LOC120096599uncharacterized LOC120096599143709156937096980Rat
61856Gabra2gamma-aminobutyric acid type A receptor subunit alpha 2143709725137230030Rat
621732Gabrg1gamma-aminobutyric acid type A receptor subunit gamma 1143739621737469606Rat
41070370LOC120096752U6 spliceosomal RNA143764334437643450Rat
40995005LOC120096743U6 spliceosomal RNA143769257737692683Rat
41386864LOC120096772U7 small nuclear RNA143795682137956881Rat
40926311LOC120096533uncharacterized LOC120096533143804510538050006Rat
41347535LOC120096823small nucleolar RNA SNORA17143847900538479130Rat
41044971LOC120096534uncharacterized LOC120096534143848770738491128Rat
1305521Gnpda2glucosamine-6-phosphate deaminase 2143852066338538713Rat
1310774Guf1GTP binding elongation factor GUF1143853795338557331Rat
1310766Yipf7Yip1 domain family, member 7143857104538599070Rat
41216070LOC120096807small nucleolar RNA SNORA17143861569838615827Rat
1312020Kctd8potassium channel tetramerization domain containing 8143877327439018182Rat
41176151Rpl7-ps23ribosomal protein L7, pseudogene 23143878280338783597Rat
1594181Hspd1-ps4heat shock protein family D (Hsp60) member 1, pseudogene 4143897226638974496Rat
40997548LOC120096598uncharacterized LOC120096598143612390036162244Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10113D14Mit2194141759357517593761Ratregion
10135D14Wox11135141762256217622685Ratregion
10622D14Mgh3120141863134518631470Ratregion
10623D14Wox12194141864404318644232Ratregion
11077D14Wox18147141730012517300272Ratregion
11078D14Mgh10235141730006917300296Ratregion
33953D14Mit1186141103062211030812Ratregion
34479D14Mgh7112141025455610254668Ratregion
11482D14Wox13194141984803919848270Ratregion
11482D14Wox13194141985881119859012Ratregion
11483D14Wox17141985879219859003Ratregion
33551D14Mit6191141827449818274691Ratregion
33692D14Mit12140143766971937669857Ratregion
33772D14Mit3100143333435333334448Ratregion
37350D14Rat42242141280020012800448Ratregion
35342D14Rat8132143032009230320216Ratregion
35465D14Rat13125143258323832583345Ratregion
37030D14Rat31591490888099088978Ratregion
37124D14Rat14200143115335031153547Ratregion
37136D14Rat105237143295352432953740Ratregion
36520D14Rat7168142283307822833252Ratregion
34890D14Rat9130142803506828035204Ratregion
34965D14Rat10176143088377730883947Ratregion
35713D14Rat11172143905723739057404Ratregion
35805D14Rat5160141027701610277166Ratregion
35965D14Rat6174141487516814875342Ratregion
39598D14Rat81202142119949321199724Ratregion
39876D14Rat98227141301531113015539Ratregion
40712D14Rat83228143107177431072011Ratregion
38408D14Rat65129143404961034049719Ratregion
38486D14Rat41140142658520526585343Ratregion
40104D14Rat99237142453123024531477Ratregion
40146D14Rat76163141098859410988749Ratregion
38932D14Rat36145143076702530767156Ratregion
39042D14Rat52135143482377234823917Ratregion
39138D14Rat50232142541088525411143Ratregion
39174D14Rat55219142565635625656577Ratregion
39568D14Rat74212141026652010266726Ratregion
41990D14Arb16120142121750821217635Ratregion
41992D14Arb17190141864401218644233Ratregion
41996D14Arb3277141729924417299529Ratregion
41998D14Arb4246141762249617622741Ratregion
42002D14Arb6300142043920720439526Ratregion
41160D14Rat79202141307741513077619Ratregion
41348D14Rat80154141232686612327004Ratregion
43008D14Rat1011621497444899744646Ratregion
43009D14Rat104127141342914713429281Ratregion
43010D14Rat103230141280874912808976Ratregion
43013D14Rat114242141263435112634585Ratregion
43015D14Rat116146142766793827668085Ratregion
43016D14Rat117126143168038331680527Ratregion
42390D14Rat143119141821258418212709Ratregion
40834D14Rat78104141599509915995211Ratregion
40930D14Rat82211142820319428203397Ratregion
41018D14Rat84115143247312332473250Ratregion
41690D14Rat102200141817462718174822Ratregion
41790D14Rat106245143220763432207871Ratregion
45149D14Got12315141261162612611938Ratregion
45151D14Got13236141186828911868525Ratregion
45152D14Got16156141065432710654483Ratregion
45153D14Got152451491148449115089Ratregion
45155D14Got19197141555212315552320Ratregion
45156D14Got22299141542937215429671Ratregion
45158D14Got18171141555998715560158Ratregion
45159D14Got20178141558915315589333Ratregion
45160D14Wox2186141668310216683292Ratregion
45162D14Got23198141749136017491558Ratregion
45163D14Got25175141797429517974470Ratregion
45164D14Got26138141815274618152886Ratregion
45165D14Got29133142034430420344439Ratregion
45166D14Got33254142565639825656652Ratregion
45167D14Got32197142443885524439049Ratregion
45169D14Got38253142772958727729840Ratregion
45170D14Got36122142820683028206952Ratregion
45171D14Got37176142798495727985134Ratregion
45172D14Got39139143038862130388760Ratregion
45173D14Got89263143051866230518925Ratregion
45174D14Got43134143439149434391628Ratregion
45175D14Got41128143210261632102744Ratregion
45176D14Got40244143289876132899005Ratregion
45177D14Got42253143397854533978795Ratregion
45182D14Got52157143904498239045139Ratregion
45183D14Got54273143889819738898470Ratregion
45184D14Got55118143848665038486768Ratregion
45187D14Got35119142746395527464076Ratregion
60762D14Wox10100141762256117622640Ratregion
60763D14Wox3191142137954621379735Ratregion
60069D14Got57230143878170238781930Ratregion
625816D14Got56150143889818238898332Ratregion
625820D14Got90190143515928435159474Ratregion
60058D14Got24150141756528517565435Ratregion
60059D14Got2791141880112418801217Ratregion
60060D14Got28169141880108718801258Ratregion
60061D14Got30283141964900219649280Ratregion
60063D14Got44153143544203235442185Ratregion
60064D14Got45126143501109535011221Ratregion
66462D14Mco13350141317472713175095Ratregion
738055D14Hmgc4247141984801919848266Ratregion
738057D14Hmgc5198142177574021775938Ratregion
738058D14Hmgc7216143626908236269300Ratregion
738059D14Hmgc3144141773143117731575Ratregion
738061D14Hmgc6155142368553923685694Ratregion
738061D14Hmgc6155142368553923685855Ratregion
738061D14Hmgc6155142368557123685694Ratregion
66575D14Mco7338143755162137551970Ratregion
66577D14Mco8210142128638821286593Ratregion
66697D14Uia4227142250750422507731Ratregion
67231D14Arb18128142036015820360286Ratregion
1630300D14Got101124143275666532756789Ratregion
1630530D14Wox31290142042160720421896Ratregion
1630716D14Got134162141740246517402624Ratregion
1631784D14Wox27171141073692810737099Ratregion
1627952D14Got142215141570245515702672Ratregion
1628668D14Wox20184143305582933056013Ratregion
1628920D14Got154201141160505211605253Ratregion
1641546D14Got102197143482371234823909Ratregion
1633391D14Got130171141797433417974505Ratregion
1634893D14Got129185141732957717329764Ratregion
1634903D14Got119193143552646435526657Ratregion
1635397D14Wox19142043937820439524Ratregion
1636252D14Got100220141088568010885902Ratregion
1637138D14Ulb1304141562902915629335Ratregion
1637440D14Got1392141493816679381872Ratregion
1634245D14Got132266141515146815151734Ratregion
4145308D14Hmgc11293141592753015927824Ratregion
4145310D14Hmgc10247141588074515880993Ratregion
4145312D14Hmgc12163141594176015941924Ratregion
4145314D14Hmgc9229141587577815876008Ratregion
4145316D14Hmgc13233141599212815992362Ratregion
7205986Ppia150142100663421006784Ratregion
7193050U27267123141731111917311242Ratregion
7206728stSG6070150141579705515798143Ratregion
7206510UniSTS:546792882141210775512108637Ratregion
5035881PMC275467P5941141757579717576738Ratregion
5038634BB23255183141942923919429322Ratregion
5036007PMC84675P1646143086409030864736Ratregion
5038904RH127399220142294759422947813Ratregion
5039006RH127459183141786069517860878Ratregion
5039034RH127475150141612868016128830Ratregion
5037051RH36296127143287500032875127Ratregion
5033979RH140889183141586682415867007Ratregion
5028637RH1256892011495623059562506Ratregion
7206204Afp165141757449317575848Ratregion
5034153RH141568200143124966031249860Ratregion
5028793RH142349150143519009635190246Ratregion
5028867RH142631195143455675434556950Ratregion
5031840AU046980234141029275810292992Ratregion
5034398AA998890205141272965012729855Ratregion
5029231RH144013126141561096515611091Ratregion
5029309RH144308200141564605015646250Ratregion
5029311RH144316158143342901033429168Ratregion
5032119RH94451156143300612933006285Ratregion
5034772AI406402208141320275613202964Ratregion
5026810RH133620216143605920436059420Ratregion
5026864RH133820209143452947534529684Ratregion
5035130BE096355184141934132219341506Ratregion
5032369C87704114141951584719515961Ratregion
5032451Fgf5177141132542011325597Ratregion
5027147WI-17713156142130128821301444Ratregion
5027293AW557942109143489789934898008Ratregion
5027295C80280115141942893519429050Ratregion
5027297AW557551132141951594119516073Ratregion
5032815RH135403185143079371230793897Ratregion
5032909RH136935183142195577521955958Ratregion
5033017RH137289187143533843335338615Ratregion
5025000AU022345228143085095930851187Ratregion
5025002BB446153103142194468521944788Ratregion
5030321BE105744151142047497320475124Ratregion
5030499BI288928157141011708210117239Ratregion
5033247RH138130208141026030110260509Ratregion
5033279RH138249164143680509536805259Ratregion
5025326RH127888187143119920331199390Ratregion
502794338.MMHAP88FLE5.seq158142229442622294584Ratregion
5033467RH138942129142706719327067322Ratregion
5033487RH139013127143470433934704466Ratregion
5033653RH139612191141646865216468843Ratregion
5025620RH129019188141563726015637448Ratregion
5025774RH129612213143853845238538665Ratregion
5028253D4Mit35368142416042724160495Ratregion
5028261D5Mit306241143127548831275729Ratregion
5030903BF399292192141489982814900020Ratregion
5030919BF399376166141272780912727975Ratregion
5028446U27267125141731069517310820Ratregion
5051829RH94682196141272965912729855Ratregion
5051390M86567121143722832137228442Ratregion
5051392AI118071132142083348420833616Ratregion
5051395AW548875104141490937314909477Ratregion
5055895RH144064138142637447926374617Ratregion
5056341RH144322172143666746336667635Ratregion
5053835RH142878240141331104413311284Ratregion
5053835RH142878240141331104413311284Ratregion
5056659RH144506104141850554418505648Ratregion
5054117RH143040134143607093836071072Ratregion
5059482BI291183150141780692017807070Ratregion
5055055RH143580112143421894734219059Ratregion
5058012BF386462187143430156234301749Ratregion
5055823RH144023264143540996635410230Ratregion
5056057RH144158135141288138612881521Ratregion
5058692BE102309169143416396234164131Ratregion
5059648BE097536199141037982510380024Ratregion
5052273M84607174143300869233008866Ratregion
5052446RH118291195141646350016463695Ratregion
5056791RH144582171141036724210367413Ratregion
5055267RH143703239141335958713360257Ratregion
5055291RH143716108141607185716071965Ratregion
5055503RH1438391531491080229108175Ratregion
5058916BF387243175143115763031157805Ratregion
5059036BF393957130143119704031197170Ratregion
5052863RH142317154142185529221855446Ratregion
5052931RH142357199141490201414902213Ratregion
5052961RH142374164143551629635516460Ratregion
5052965RH142376176143853829838538474Ratregion
5059996BI285802182141757344517574505Ratregion
5058266BI277889158141586813815868296Ratregion
5052265M37823198141134564811345846Ratregion
5058372BG376722142141943274319432885Ratregion
5050370RH134017193141508981515090008Ratregion
5053287RH142561104143746936037469464Ratregion
5053471RH142668209143198651731986726Ratregion
5059230BF387708162141326043613260598Ratregion
5059314BG377265136141015145210151588Ratregion
5050646RH134177206141257981112580017Ratregion
7193131HNRPDL3001495584679559570Ratregion
5050062RH133840187141163284911633036Ratregion
5052444X53798109141718166117181770Ratregion
5052597RH125852248141601789216018140Ratregion
5052849RH142310181141570642515706606Ratregion
5052857RH142314174143558940035590305Ratregion
5053017RH142406182141719361617193797Ratregion
5051260RH134531183141944156919441752Ratregion
5054207RH143092126142688107626881202Ratregion
5053419RH1426381061495649919565097Ratregion
5051627U14418107143608060636080713Ratregion
5051757RH94641171143226081232260983Ratregion
5051769RH94648153143608041236080565Ratregion
5054595RH143314144141154208811542232Ratregion
5051092RH134435206143457828734578493Ratregion
5041690RH129002187143591184835912035Ratregion
5041712RH129015203141272888712729090Ratregion
5041868RH129105152141729830817298460Ratregion
5040966RH128586219143226062532260844Ratregion
5044308RH130528218141570665415706872Ratregion
5044388RH1305740142187680321876981Ratregion
5044648RH130724209143361474133614950Ratregion
5043750RH130205183141168187211682057Ratregion
5041440RH128858220141569198815692208Ratregion
5046174RH131601187142663297726633164Ratregion
5046266RH131654202141943190719432110Ratregion
5044630RH130714197141279140512791604Ratregion
5046420RH131742191143553787935538070Ratregion
5044458RH130614194143421746334217656Ratregion
5046504RH131791209141602161116021820Ratregion
5046540RH131812216143361609333616655Ratregion
5047872RH132577182141787728617877468Ratregion
5049022RH133241198141933259419332792Ratregion
5049172RH133327185143204654732046732Ratregion
5046618RH131857220142365497323655193Ratregion
5047962RH132629191143489787634898067Ratregion
5049012RH133235189143193026831930457Ratregion
5049072RH133270180141954605019546230Ratregion
5048048RH132678203143457748934577692Ratregion
5049354RH133432196143085094730851143Ratregion
5049398RH133458184143163101631631200Ratregion
5049430RH1334761801495632499563429Ratregion
5047124RH132147209141942884419429053Ratregion
5047302RH132249203143128426431284467Ratregion
5048378RH132869186141932924219329428Ratregion
5048406RH132885212141944121219441424Ratregion
5048504RH132941180143859879038598970Ratregion
5039938RH127994183141561208015612263Ratregion
5042422RH129425157143119920331199360Ratregion
5048580RH132985203141219426812194471Ratregion
5049518RH133527150141078722710787377Ratregion
5039990RH128025187143199364731993834Ratregion
5042652RH129562210142032860420329657Ratregion
5039814RH127922217142065173020651948Ratregion
7192214Pf40141729870017299140Ratregion
5041078RH128650180141610158116101761Ratregion
5041152RH128692220141509950615099726Ratregion
5043696RH130174169143161159431611763Ratregion
5072726RH137017185141490229914902484Ratregion
5071926RH135365189143414740834147597Ratregion
5072036RH135428197143560468335604880Ratregion
5073824RH137660177141066655010666727Ratregion
5072396RH136825250143361791533618780Ratregion
5072436RH136848203141490896114909164Ratregion
5072524RH136899192141606304416063236Ratregion
5074204RH137881177142194461921944796Ratregion
5074304RH137939145141248188712482032Ratregion
5076386RH139145167141490937814909545Ratregion
5076506RH139215174143080232330803044Ratregion
5072592RH1369381831496335599633742Ratregion
5074474RH138038152143901785539018007Ratregion
5075520RH138641144142050521120505355Ratregion
5075902RH138863133141071204410712177Ratregion
5074810RH138231121141000906510009186Ratregion
5077228RH139636215141248578312485998Ratregion
5077416RH139744200141070856510708765Ratregion
5076000RH138919164143668587636686040Ratregion
5075572RH138671177141490715614907333Ratregion
5076638RH139292133143419425934194392Ratregion
5078170RH140184216143475428834754504Ratregion
5078284RH140250197143523705735237254Ratregion
5079754RH141183197141601871016018907Ratregion
5078704RH140501103141248590212486005Ratregion
5079916RH141277216143128626631286482Ratregion
5079956RH141300203141572941515729825Ratregion
5080036RH141346180143546115835461338Ratregion
5078278RH1402471811492690689269249Ratregion
5080096RH141380200143562784435628044Ratregion
5080098RH141381185141930666019306840Ratregion
5070644RH134622198143359637633596574Ratregion
5070736RH1346752041492099599210163Ratregion
5073034RH137196180143465279134652971Ratregion
5079304RH140904220143119911531199335Ratregion
5080268RH141482211141572812715728338Ratregion
5073362RH137392151141729498217295667Ratregion
5073510RH137478213143197412031974333Ratregion
5071212RH134952189141674848316748672Ratregion
5071242RH134969216142112829721128513Ratregion
5070640RH134619193142116727821167471Ratregion
5070678RH134641193143198999531990188Ratregion
5073872RH137687155141249224412492399Ratregion
5073424RH137428208143355625033556459Ratregion
5071492RH135113180143591041835910597Ratregion
5074812RH138232158141709002217090184Ratregion
5061766AW533278157141978385619784013Ratregion
5061802AW52704392141902398119024073Ratregion
5061838AW533807152143723329337233445Ratregion
5065078AI044222137141572643615727691Ratregion
5067028AU048008234141027494710275181Ratregion
5067258AU047865130141648255116482681Ratregion
5067360AU047801278141647008616470364Ratregion
5067752AU047557163141597216215972326Ratregion
5068144AU047322140142925392429254064Ratregion
5068512AU047101207141729198917292196Ratregion
5068594AU047051192143062556730625759Ratregion
5068612AU047039231142860733028607561Ratregion
5068754AU046952108142569577425695884Ratregion
5068852AU046886238142766790127668139Ratregion
5068886AU046864229143348525133485483Ratregion
5070103RH94474100141071252910712629Ratregion
5070205RH94533106141757342917573535Ratregion
5068996AU046793201143167580331676008Ratregion
5069716AU046317118141525666815256786Ratregion
5069748AU029143134142124033421240463Ratregion
5070496Gsh2282143312583533126117Ratregion
5060098BF388492135142120298421203119Ratregion
5060272AW531051184143131534231315526Ratregion
5060344AW531504177142394885223949029Ratregion
5062002AI454088144143199234531992489Ratregion
5062022BF397208109141603362816033737Ratregion
5062106BE106202157141037896910379124Ratregion
5063652BE107907170143498865034988820Ratregion
5065316BE121426203143709332737093530Ratregion
5060436BE110064167142401834524018512Ratregion
5060674BE098844183143162111131621298Ratregion
5063820AW535324176143198891731989093Ratregion
5065806AI045017171141727039617270567Ratregion
5060204AI072690192143472051534720707Ratregion
5061904BI294139193141219159012191783Ratregion
5062074BF397398134142658280026582934Ratregion
5063528BF404311215143115763031157845Ratregion
5063562BI289920104143394297733943081Ratregion
5063568BF404399222141272197012722192Ratregion
5063608BE107836151142657432826574479Ratregion
5065470BE1090351651493465939346758Ratregion
5062318BE106508190141951573519515925Ratregion
5063986BE120376189141057189710572086Ratregion
5062780AW534411150141488590614886056Ratregion
5064422BI302173206141990277019902977Ratregion
5062824BI295036136141948864119488777Ratregion
5062966BE113508154141481019014810343Ratregion
5064532BF399306173143163963431639807Ratregion
5061240BE111373150143401749534017645Ratregion
5064708BE108365173143086088730861060Ratregion
5061502BE105338153142636484226364995Ratregion
5063246BI301575193143028753430287727Ratregion
5066546AU048293120142294107822941198Ratregion
5061610AA875648157143108270331082860Ratregion
5086935AA801220210141646878416468994Ratregion
5087052BM389183198143097044330970641Ratregion
5087526PMC275467P2208141762278117622989Ratregion
5086425AW529895205141943559819435803Ratregion
5087552PMC312758P2177143121618331216360Ratregion
5082813BF390183163141712783117127994Ratregion
5088951AU048866176141747783617478012Ratregion
5089139AU048978240141292232012922560Ratregion
5089153AU048986107141543133715431372Ratregion
5089855AU049403203141336501313365216Ratregion
5089937AU049453267143438734934387616Ratregion
5089953AU049462150141129079911290949Ratregion
5089301AU049074121141520273615204218Ratregion
5089313AU049082185143096738430967569Ratregion
5083705AI009635205143421680934217014Ratregion
5089689AU049304225141545089715451122Ratregion
5084042AA894182203141248126812481471Ratregion
5090247AU0496381441491148379114981Ratregion
5084394AI233864231141726929917269530Ratregion
5087805D5Wsu145e2761495633629563638Ratregion
5082441BI274763218141503260915032827Ratregion
5090713AU049919211143027977830279989Ratregion
5088395AU048544264143223407932234343Ratregion
5090037AU049513209141026650210266711Ratregion
5088989AU048888125143549544735495572Ratregion
5082669BE119975196143160720431607400Ratregion
5085850AI231703161141932426119324422Ratregion
5086078AA891207188141561187815612066Ratregion
5080960RH141883188141248128312481471Ratregion
5084530AI176955135141884474318844878Ratregion
5085228AI598408157141775846017758617Ratregion
5085274AI176044198141930715719307352Ratregion
5085569BM390590214141559784515598059Ratregion
5083621BI276488217143198877431988991Ratregion
5503198mGk2484141210794712108431Ratregion
5507587Alb1128141762198717622819Ratregion
5503611UniSTS:465369103141761092417611027Ratregion
5503839PRDM8_8072919141140450511405424Ratregion
5507632D5Buc331172143660493536606107Ratregion
5507634UniSTS:1426321417143377449733775914Ratregion
5504799UniSTS:275850174141757456717575931Ratregion
5504885ha3026130142314500623145136Ratregion
5505030Gpx40143533811235338614Ratregion
5505022Pf484141729849317298715Ratregion
5505548G394862121499321929932404Ratregion
5505835UniSTS:495883239142365344823653687Ratregion
5505494D16S26254281491803659180793Ratregion
5506047UniSTS:498239426143254805132548477Ratregion
5506869G46840210141906187019062080Ratregion
5507037fa55h08.s10141723926417239510Ratregion
5507037fa55h08.s10141723926417239611Ratregion
5506931G54151167143198999231990159Ratregion
5507253AI0609080141563178515633459Ratregion
5499889UniSTS:235209266141951580719516073Ratregion
5499885UniSTS:235197252143591178135912033Ratregion
5499887UniSTS:235223175141491009514910270Ratregion
5502361RH124614257141786153317861790Ratregion
5503412G34499109141784556517845674Ratregion
5504734PMC86057P4438141762292017623358Ratregion
5501508D14S2921064143197739531978459Ratregion
5501708HNRPDL14651495596329561097Ratregion
5501679UniSTS:265677293142100676521007058Ratregion
5501720UniSTS:266988152142400776024007912Ratregion
5502012MARC_23646-23647:1029444341:11581496278969628952Ratregion
5502014MARC_23650-23651:1029445581:19531496326219633574Ratregion
5502627RH125924233141876873218768964Ratregion
5502847Arhgap11a0142108931021090044Ratregion
5502881Gabrb1693143608043536081128Ratregion
6484684D14Uwm13214142811832128118535Ratregion
6484686D14Uwm14262143161416631614428Ratregion
6480636D14Uwm1140143170701131707201Ratregion
6480638D14Uwm2220143367787733678087Ratregion
6480641D14Uwm3298143354871033549008Ratregion
6480643D14Uwm4240143247190232472125Ratregion
6484235D14Uwm5190143351459933514760Ratregion
6484237D14Uwm6389143355010433550483Ratregion
6484239D14Uwm7240143195765831957909Ratregion
6484241D14Uwm8300143237430032374766Ratregion
6484241D14Uwm8300143237447032374766Ratregion
6484243D14Uwm9210143275661332756819Ratregion
6484245D14Uwm10220143293431632934528Ratregion
6484247D14Uwm11190143309750833097688Ratregion
Position Markers

Flank 1: (D14Rat11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21439,057,237 - 39,057,404 (-)MAPPER
Rnor_6.01461,873,323 - 61,873,489NCBI
Rnor_5.01461,976,011 - 61,976,177UniSTS
RGSC_v3.41441,608,939 - 41,609,106RGD
RGSC_v3.41441,608,940 - 41,609,106UniSTS
RGSC_v3.11441,611,330 - 41,611,497RGD
Celera1438,251,934 - 38,252,100UniSTS
RH 2.0 Map14498.2RGD
SHRSP x BN Map1427.1799RGD
Peak: (D14Mit6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21418,274,498 - 18,274,691 (+)MAPPER
Rnor_6.01419,909,740 - 19,909,932NCBI
Rnor_5.01419,816,468 - 19,816,660UniSTS
RGSC_v3.41419,800,225 - 19,800,418RGD
RGSC_v3.41419,800,226 - 19,800,418UniSTS
RGSC_v3.11419,800,225 - 19,800,418RGD
Celera1417,640,308 - 17,640,500UniSTS
Cytogenetic Map14p22UniSTS
Flank 2: (D14Rat3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2149,088,809 - 9,088,978 (+)MAPPER
mRatBN7.21242,824,821 - 242,824,860 (+)MAPPER
mRatBN7.21242,824,825 - 242,824,866 (+)MAPPER
Rnor_6.01410,729,098 - 10,729,268NCBI
Rnor_5.01410,676,485 - 10,676,655UniSTS
RGSC_v3.41410,339,971 - 10,340,377RGD
RGSC_v3.41410,340,102 - 10,340,272UniSTS
RGSC_v3.11410,340,102 - 10,340,272RGD
Celera149,197,754 - 9,197,924UniSTS
RH 3.4 Map14152.08UniSTS
RH 3.4 Map14152.08RGD
RH 2.0 Map14162.0RGD
SHRSP x BN Map144.62RGD
Cytogenetic Map14p22UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
71115Niddm15Non-insulin dependent diabetes mellitus QTL 154.8blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14121760611030812Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
631528Scl11Serum cholesterol level QTL 114.9blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)141757341219726296Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
61413Eae10Experimental allergic encephalomyelitis QTL 103.5nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)141762268518274498Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142216796767167967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
724541Niddm53Non-insulin dependent diabetes mellitus QTL 530.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1438130749088978Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14121760616960180Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141487516830883947Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Pia20

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_disease E3 allele containing Pia fragment reduces development of chronic arthritis, measured by secretion of cartilage oligomeric matrix protein (COMP) 730280