LOC120096819 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120096819 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120096819
Name: small nucleolar RNA SNORA17
RGD ID: 41119499
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: AABR07014688.1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81424,732,148 - 24,732,276 (+)NCBIGRCr8
mRatBN7.21424,377,446 - 24,377,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1424,377,446 - 24,377,574 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl1426,311,807 - 26,311,935 (+)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map14p21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat

1 to 10 of 20 rows





RefSeq Transcripts XR_005493651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000086649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1424,377,446 - 24,377,574 (+)Ensembl
RefSeq Acc Id: XR_005493651
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81424,732,148 - 24,732,276 (+)NCBI
mRatBN7.21424,377,446 - 24,377,574 (+)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-16044 BioCyc
Ensembl Genes ENSRNOG00000061566 Ensembl
NCBI Gene LOC120096819 ENTREZGENE
PhenoGen LOC120096819 PhenoGen
RatGTEx ENSRNOG00000061566 RatGTEx
RNAcentral URS0000694723 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120096819  small nucleolar RNA SNORA17  AABR07014688.1    Data merged from RGD:15014179 737654 PROVISIONAL
2021-01-27 LOC120096819  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AABR07014688.1        Symbol and Name status set to provisional 45752 PROVISIONAL