Tcas4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Tcas4 (Tongue tumor susceptibility QTL 4) Rattus norvegicus

Symbol: Tcas4
Name: Tongue tumor susceptibility QTL 4
RGD ID: 631262
Previously known as: Tscc5; Tongue squamous cell carcinoma QTL 5; Tts4
Trait: tongue integrity trait   (VT:0010553)    
Measurement Type: number of squamous cell tumors of the tongue with diameter greater than 3 mm   (CMO:0001950)    
LOD Score: 7.29
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21417,622,561 - 42,337,007RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01419,191,541 - 43,957,628RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01419,098,311 - 43,777,078RGDRnor5.0
RGSC_v3.41419,141,961 - 45,020,354RGDRGSC3.4
RGSC_v3.11419,141,961 - 44,925,828RGD
Cross Type: intercross
Strains Crossed: DA WF 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
DA  (IEA)
WF  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Carcinogenesis modifier loci in rat tongue are subject to frequent loss of heterozygosity. Tanuma J, etal., Int J Cancer 2002 Dec 20;102(6):638-42.
2. Five quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue cancer in the rat. Tanuma JI, etal., Jpn J Cancer Res 2001 Jun;92(6):610-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2085Albalbumin141760739717622814Rat
1597130Rpl8-ps4ribosomal protein L8, pseudogene 4141769362617694361Rat
1562348Ankrd17ankyrin repeat domain 17141772323917862625Rat
1559547Cox18cytochrome c oxidase assembly factor COX18141786458117877483Rat
41281688LOC120096803small nucleolar RNA SNORA17141816018618160317Rat
1310750Adamts3ADAM metallopeptidase with thrombospondin type 1, motif 3141823105118437773Rat
41227516LOC120096802small nucleolar RNA SNORA17141828413118284262Rat
41015304LOC120096809small nucleolar RNA SNORA17141839961018399737Rat
40992817LOC120096583uncharacterized LOC120096583141846781518488097Rat
620168Npffr2neuropeptide FF receptor 2141851327718521919Rat
2667GcGC, vitamin D binding protein141863214618667563Rat
40949335Srp19-ps1signal recognition particle 19, pseudogene 1141876858218769192Rat
1565243LOC498339LRRGT00190141882112418839758Rat
68936Slc4a4solute carrier family 4 member 4141884128919293297Rat
620667Dckdeoxycytidine kinase141930521819326247Rat
1305114Mob1bMOB kinase activator 1B141933305819365845Rat
1310858Grsf1G-rich RNA sequence binding factor 1141941294419429364Rat
1565242Rufy3RUN and FYVE domain containing 3141943153019506531Rat
7489037Mir6321microRNA 6321141945931719459457Rat
1308540Utp3UTP3, small subunit processome component141951571619517370Rat
1561381RGD1561381similar to microsomal glutathione S-transferase 3141952550919526128Rat
1310155Jchainjoining chain of multimeric IgA and IgM141953856019546384Rat
1306796Enamenamelin141955672919581433Rat
2101Ambnameloblastin141960176119614382Rat
40975998LOC120096832small nucleolar RNA SNORA76141963029219630423Rat
1592356Amtnamelotin141964862419661181Rat
620983Oprpnopiorphin prepropeptide141970253519717550Rat
3953Smr3bsubmaxillary gland androgen regulated protein 3B141978381519788557Rat
41041616LOC120096859U4 spliceosomal RNA141985066119850849Rat
3954Vcsa2variable coding sequence A2141985123219857697Rat
11434380LOC108352824SMR1 protein-like141990080819901906Rat
1563299Smr3asubmaxillary gland androgen regulated protein 3A142005377920059568Rat
1597129Ppid-ps14peptidylprolyl isomerase D, pseudogene 14142009065620093812Rat
620592Cabs1calcium binding protein, spermatid associated 1142009696220099024Rat
41256287LOC120096584uncharacterized LOC120096584142013075920172275Rat
61990Csn3casein kappa142015403220160585Rat
1359468Fdcspfollicular dendritic cell secreted protein142016969120173983Rat
1561883Odamodontogenic, ameloblast associated142019328620202517Rat
11446409LOC108352727uncharacterized LOC108352727142019566120214723Rat
1309071Dzip1-ps1DAZ interacting protein 1, pseudogene 1142022723420229292Rat
1310384Prr27proline rich 27142023275720248617Rat
628794Csn1s2bcasein alpha s2-like B142025025720266377Rat
621152Csn1s2acasein alpha s2-like A142028116720295232Rat
1589974Stathstatherin142030732420311182Rat
61981Csn2casein beta142032258120329818Rat
2430Csn1s1casein alpha s1142034362020359614Rat
1562394Rpl30-ps7ribosomal protein L30, pseudogene 7142038186220382205Rat
11380862LOC108352728uncharacterized LOC108352728142039739320404391Rat
41273802LOC120096585uncharacterized LOC120096585142040441720406946Rat
3776Sult1e1sulfotransferase family 1E member 1142042232420439562Rat
620491Sult1d1sulfotransferase family 1D, member 1142044113520476341Rat
708534Sult1b1sulfotransferase family 1B member 1142049276320505491Rat
69432Ugt2a1UDP glucuronosyltransferase family 2 member A1142052101820545060Rat
1308444Ugt2a3UDP glucuronosyltransferase family 2 member A3142057282520590295Rat
41221305LOC120096588uncharacterized LOC120096588142059933820650775Rat
41043845Kbtbd8-ps1kelch repeat and BTB domain containing 8, pseudogene 1142061325720620826Rat
3936Ugt2bUDP glycosyltransferase 2 family, polypeptide B142063057220665062Rat
41382898LOC120096589uncharacterized LOC120096589142066552120675111Rat
41360123LOC120096590uncharacterized LOC120096590142067519020682835Rat
1595834Kbtbd8-ps2kelch repeat and BTB domain containing 8, pseudogene 2142068833320695396Rat
2321603Ugt2b-ps1UDP glycosyltransferase 2 family, polypeptide B, pseudogene 1142071753520739142Rat
41155403Ugt2b17-ps1UDP glucuronosyltransferase family 2 member B17, pseudogene 1142074059920745728Rat
628623Ugt2b15UDP glucuronosyltransferase family 2 member B15142076801520783599Rat
41189227LOC120096526UDP-glucuronosyltransferase 2B17-like142080250220807337Rat
3937Ugt2b37UDP-glucuronosyltransferase 2 family, member 37142081728520833917Rat
620895Ugt2b35UDP glucuronosyltransferase 2 family, polypeptide B35142085344120891039Rat
708417Ugt2b7UDP glucuronosyltransferase family 2 member B7142089668220919604Rat
1588690LOC689798similar to UDP-glucuronosyltransferase142094444920955564Rat
6496885Hnrnpa1-ps40heterogeneous nuclear ribonucleoprotein A1, pseudogene 40142096235220965420Rat
2321083Ppial4dpeptidylprolyl isomerase A (cyclophilin A)-like 4D142100652221007284Rat
708541Ugt2b17UDP glucuronosyltransferase family 2 member B17142102403521035784Rat
9195730Ugt2b4l-ps1UDP glucuronosyltransferase family 2 member B4 like, pseudogene 1142103826621042369Rat
1565664RGD1565664similar to UDP-glucuronosyltransferase 2B1 precursor, microsomal (UDPGTR-2)142105672621082314Rat
1587539LOC689841similar to Rho GTPase activating protein 11A142108834521089685Rat
1587531Hsp90aa1-ps3heat shock protein 90 alpha family class A member 1, pseudogene 3142110398421106561Rat
1309989Ugt2b10UDP glucuronosyltransferase 2 family, polypeptide B10142110802221127202Rat
1559459RGD1559459similar to Expressed sequence AI788959142114614021167706Rat
621706Ythdc1YTH domain containing 1142118543821215934Rat
11432687LOC108352729uncharacterized LOC108352729142121603021241866Rat
1561698Tmprss11etransmembrane serine protease 11E142129612721328203Rat
1587481Rpl23a-ps20ribosomal protein L23a, pseudogene 20142137904621379585Rat
1303278Tmprss11btransmembrane serine protease 11B142138592421405894Rat
40949944LOC120096866U6 spliceosomal RNA142139165121391757Rat
2321178Atp5mc2-ps2ATP synthase membrane subunit c locus 2, pseudogene 2142146267421463166Rat
1560675Tmprss11ftransmembrane serine protease 11F142149289621534792Rat
1306446Tmprss11gtransmembrane protease, serine 11G142154608721587258Rat
1596322Tmprss11atransmembrane serine protease 11A142162488121665284Rat
41182668LOC120096852U2 spliceosomal RNA142163718321637302Rat
620654Tmprss11dtransmembrane serine protease 11D142170733621769398Rat
1302967Tmprss11ctransmembrane protease, serine 11C142178212421837793Rat
9399075LOC103692776uncharacterized LOC103692776142180985621825718Rat
70513Gnrhrgonadotropin releasing hormone receptor142185687121874861Rat
1308324Uba6ubiquitin-like modifier activating enzyme 6142188403921947857Rat
1311584Stap1signal transducing adaptor family member 1142195046621981395Rat
41395196LOC120096806U1 spliceosomal RNA142197358221973761Rat
1303061Cenpccentromere protein C142198806722046732Rat
11497443Acta1-ps1actin, alpha 1, skeletal muscle, pseudogene 1142211410422114971Rat
41057074LOC120096753U1 spliceosomal RNA142224747522247636Rat
41134169LOC120096591uncharacterized LOC120096591142226463822347467Rat
2318302Smokl-ps6sperm motility kinase like, pseudogene 6142267773222682199Rat
41322366LOC120096527uncharacterized LOC120096527142300644523041321Rat
1585182Pgk1-ps10phosphoglycerate kinase 1, pseudogene 10142321415023215412Rat
2324510Dus4l-ps1dihydrouridine synthase 4-like, pseudogene 1142327997423280735Rat
2324321Mobp-ps1myelin-associated oligodendrocyte basic protein, pseudogene 1142350234823502821Rat
41296642LOC120096828U1 spliceosomal RNA142357271223572874Rat
1565048RGD1565048similar to 60S ribosomal protein L9142364807023648731Rat
620831Epha5EPH receptor A5142365339324020135Rat
40988626LOC120096592uncharacterized LOC120096592142430608824337634Rat
41119499LOC120096819small nucleolar RNA SNORA17142437744624377574Rat
40986009LOC120096830small nucleolar RNA SNORA17142445330224453395Rat
1304608Tecrltrans-2,3-enoyl-CoA reductase-like142473224124805272Rat
41363359LOC120096750U6 spliceosomal RNA142532491125325017Rat
11503027LOC108352825protein transport protein Sec61 subunit gamma pseudogene142556696925655719Rat
7623930LOC102549397zinc finger protein 120-like142569958225701112Rat
2324284Acer3-ps1alkaline ceramidase 3, pseudogene 1142572905125729730Rat
7513863LOC102546751uncharacterized LOC102546751142601753826019528Rat
41325492LOC120096723ferritin light chain 1-like142605035526050863Rat
11438225LOC108352732uncharacterized LOC108352732142621490926225971Rat
620836Adgrl3adhesion G protein-coupled receptor L3142633632027104060Rat
11405419LOC108352841uncharacterized LOC108352841142647842326487525Rat
11456987LOC108352849small nuclear ribonucleoprotein G pseudogene142763159327632651Rat
40950797LOC120096528uncharacterized LOC120096528142765058027663108Rat
41154061LOC120096593uncharacterized LOC120096593142792582727940488Rat
41062143LOC120096755U6 spliceosomal RNA142809365428093760Rat
41179800LOC120096787small nucleolar RNA SNORA13142831380228313928Rat
41038991LOC120096781small nucleolar RNA SNORD113/SNORD114 family142836562528365700Rat
41151227LOC120096857U4 spliceosomal RNA142925528129255363Rat
41398362LOC120096810small nucleolar RNA SNORA17142942757529427704Rat
1597019Ipo7-ps2importin 7, pseudogene 2142948016729483689Rat
41092069Trnap-ggg10transfer RNA proline (anticodon GGG) 10142989397029894044Rat
1561589RGD1561589similar to RIKEN cDNA 5730434I03 gene143000513830006045Rat
11375302LOC108352734uncharacterized LOC108352734143039064930402623Rat
41091691LOC120096812small nucleolar RNA SNORA17143047591730476044Rat
7690127LOC102551339uncharacterized LOC102551339143049803330624872Rat
41074429LOC120096874U6 spliceosomal RNA143054888330548989Rat
1306201Igfbp7insulin-like growth factor binding protein 7143073741430797317Rat
41374531LOC120096730uncharacterized LOC120096730143075052230755635Rat
41280434Rangrf-ps3RAN guanine nucleotide release factor, pseudogene 3143075131230753398Rat
9201561Rpl39-ps12ribosomal protein L39, pseudogene 12143075805130758421Rat
11438234Trnac-gca38transfer RNA cysteine (anticodon GCA) 38143075871030758781Rat
41094989LOC120096729uncharacterized LOC120096729143077506730780888Rat
1309477Polr2bRNA polymerase II subunit B143079722830834916Rat
1359460Noa1nitric oxide associated 1143083501230851296Rat
621069RestRE1-silencing transcription factor143085910930879828Rat
7498730LOC102551532uncharacterized LOC102551532143089262630894920Rat
41111789LOC120096875U6 spliceosomal RNA143096060030960706Rat
1302956Spink2serine peptidase inhibitor, Kazal type 2143096768230974326Rat
11432042LOC108352735uncharacterized LOC108352735143097803930982711Rat
41396352LOC120096731uncharacterized LOC120096731143098967430995959Rat
7684935LOC102551595uncharacterized LOC102551595143101355731025555Rat
621841HopxHOP homeobox143105591231082909Rat
40947943LOC120096732uncharacterized LOC120096732143105623431060971Rat
41219020LOC120096733uncharacterized LOC120096733143107643331077597Rat
1562571Thegltheg spermatid protein-like143111010431152487Rat
1303337Arl9ADP-ribosylation factor like GTPase 9143115758531166803Rat
41335138LOC120096735uncharacterized LOC120096735143116489631171639Rat
1564787Srp72signal recognition particle 72143116817531195717Rat
40961482LOC120096737uncharacterized LOC120096737143119032931195581Rat
620066Paicsphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase143119908631232731Rat
620237Ppatphosphoribosyl pyrophosphate amidotransferase143121574131250144Rat
7632687LOC102552854uncharacterized LOC102552854143124780131255151Rat
1311135Aasdhaminoadipate-semialdehyde dehydrogenase143125501931281802Rat
1311575Cracdcapping protein inhibiting regulator of actin dynamics143128406631520103Rat
41313716LOC120096736uncharacterized LOC120096736143131369431338837Rat
40932403Rpl23a-ps19ribosomal protein L23a, pseudogene 19143143224731432742Rat
1310726Cep135centrosomal protein 135143153053831595718Rat
40943998LOC120096724uncharacterized LOC120096724143159528931623397Rat
1304939Exoc1exocyst complex component 1143161153631659920Rat
1591303Exoc1lexocyst complex component 1 like143167344231698605Rat
7520032LOC102556008uncharacterized LOC102556008143175176431829013Rat
68388Nmuneuromedin U143184456431872196Rat
1559712Pdcl2phosducin-like 2143187456331895272Rat
41027913LOC120096594uncharacterized LOC120096594143188221031884883Rat
620271Clockclock circadian regulator143190854231992673Rat
11355448LOC108352740uncharacterized LOC108352740143195842231975843Rat
1306983Tmem165transmembrane protein 165143199348932018717Rat
1308828Srd5a3steroid 5 alpha-reductase 3143204641532060796Rat
2965Kdrkinase insert domain receptor143221787132261018Rat
41345606LOC120096529uncharacterized LOC120096529143235515232357606Rat
620568KitKIT proto-oncogene receptor tyrosine kinase143254745932624694Rat
1598162Snrpd2-ps1small nuclear ribonucleoprotein D2 polypeptide, pseudogene 1143263628032636653Rat
41110000LOC120096756U6 spliceosomal RNA143263823932638343Rat
41234281LOC120096530uncharacterized LOC120096530143274985732751927Rat
41059665Ndufa5-ps3NADH:ubiquinone oxidoreductase subunit A5, pseudogene 3143294983932950212Rat
3284Pdgfraplatelet derived growth factor receptor alpha143300583833054347Rat
1308047Gsx2GS homeobox 2143312379933126151Rat
7501116Rbbp4-ps3RB binding protein 4, chromatin remodeling factor, pseudogene 3143315264933153949Rat
1309278Chic2cysteine-rich hydrophobic domain 2143315766933192015Rat
41344346LOC120096595uncharacterized LOC120096595143327727833278438Rat
1308159Lnx1ligand of numb-protein X 1143351442933617086Rat
1309336Fip1l1factor interacting with PAPOLA and CPSF1143361521033675742Rat
1562708Scfd2sec1 family domain containing 2143368334834008232Rat
41230065LOC120096744U6 spliceosomal RNA143394732233947428Rat
1303099Rasl11bRAS-like family 11 member B143401492434019146Rat
40997259LOC120096596uncharacterized LOC120096596143402127934025049Rat
7540659LOC102554412uncharacterized LOC102554412143404969034058012Rat
6489076Dancrdifferentiation antagonizing non-protein coding RNA143412695634127936Rat
41244228LOC120096831small nucleolar RNA SNORA26143412764034127760Rat
1564808Usp46ubiquitin specific peptidase 46143415005534219227Rat
7564466LOC102554514uncharacterized LOC102554514143416173934171159Rat
1597128Wbp11-ps2WW domain binding protein 11, pseudogene 2143429733934299886Rat
2322951LOC100363494ubiquitin B-like143431294934313236Rat
11362928LOC108352851uncharacterized LOC108352851143433385834338439Rat
11387368LOC108352742uncharacterized LOC108352742143442022134447174Rat
735208Spata18spermatogenesis associated 18143453193134558671Rat
9438180LOC103692822uncharacterized LOC103692822143456039134563548Rat
1594202Sgcbsarcoglycan, beta143456361434578614Rat
1306094Lrrc66leucine rich repeat containing 66143458131834604534Rat
1310422Dcun1d4defective in cullin neddylation 1 domain containing 4143465272334733122Rat
1310958Cwh43cell wall biogenesis 43 C-terminal homolog143475427934800530Rat
2323837Eif5-ps2eukaryotic translation initiation factor 5, pseudogene 2143481029534812256Rat
41292566LOC120096532uncharacterized LOC120096532143484139934843213Rat
2319541Ociad2OCIA domain containing 2143487366834889276Rat
1359549Ociad1OCIA domain containing 1143489785134915291Rat
1311309FrylFRY like transcription coactivator143495662335189738Rat
727972Zar1zygote arrest 1143519344635197382Rat
1309536Slc10a4solute carrier family 10, member 4143519850935203729Rat
40990623Trnah-aug2transfer RNA histidin (anticodon AUG) 2143520503235205104Rat
1311593Slain2SLAIN motif family, member 2143523603435314186Rat
1592953Gpx4-ps3glutathione peroxidase 4, pseudogene 3143533811035338759Rat
620973Tectec protein tyrosine kinase143535255135461585Rat
41255002LOC120096597uncharacterized LOC120096597143540854835410632Rat
1306481TxkTXK tyrosine kinase143546336935519448Rat
1310092Nipal1NIPA-like domain containing 1143553764135561651Rat
621815Cnga1cyclic nucleotide gated channel subunit alpha 1143556694735605065Rat
1359201Nfxl1nuclear transcription factor, X-box binding-like 1143562608635667505Rat
727887Corincorin, serine peptidase143568060135910703Rat
1592952Anp32a-ps2acidic nuclear phosphoprotein 32 family member A, pseudogene 2143579579935798154Rat
7714547LOC102550273synaptonemal complex central element protein 2-like143580073535802489Rat
1588541Atp10dATPase phospholipid transporting 10D (putative)143591172836012549Rat
11508820LOC10835274340S ribosomal protein S2 pseudogene143593582335936668Rat
41029313Myl6-ps3myosin light chain 6, pseudogene 3143602148036043186Rat
1305402Commd8COMM domain containing 8143604904036059617Rat
2649Gabrb1gamma-aminobutyric acid type A receptor subunit beta1143606872536548946Rat
40997548LOC120096598uncharacterized LOC120096598143612390036162244Rat
1333995Or6c66g-ps1olfactory receptor family 6 subfamily C member 66G, pseudogene 1143627382136274693Rat
621670Gabra4gamma-aminobutyric acid type A receptor subunit alpha 4143659078236667724Rat
2319120Cox7b2cytochrome c oxidase subunit 7B2143669309636805323Rat
41131698Trnav-aac20transfer RNA valine (anticodon AAC) 20143696361536963687Rat
41089551LOC120096599uncharacterized LOC120096599143709156937096980Rat
61856Gabra2gamma-aminobutyric acid type A receptor subunit alpha 2143709699537230030Rat
621732Gabrg1gamma-aminobutyric acid type A receptor subunit gamma 1143739621737469606Rat
41070370LOC120096752U6 spliceosomal RNA143764334437643450Rat
40995005LOC120096743U6 spliceosomal RNA143769257737692683Rat
41386864LOC120096772U7 small nuclear RNA143795682137956881Rat
40926311LOC120096533uncharacterized LOC120096533143804510538050006Rat
41347535LOC120096823small nucleolar RNA SNORA17143847900538479130Rat
41044971LOC120096534uncharacterized LOC120096534143848770738491128Rat
1305521Gnpda2glucosamine-6-phosphate deaminase 2143852066338538713Rat
1310774Guf1GTP binding elongation factor GUF1143853795338557331Rat
1310766Yipf7Yip1 domain family, member 7143857104538599070Rat
41216070LOC120096807small nucleolar RNA SNORA17143861569838615827Rat
1312020Kctd8potassium channel tetramerization domain containing 8143877327439018182Rat
41176151Rpl7-ps23ribosomal protein L7, pseudogene 23143878280338783597Rat
1594181Hspd1-ps4heat shock protein family D (Hsp60) member 1, pseudogene 4143897226638974496Rat
1561787Acat2-ps2acetyl-CoA acetyltransferase 2, pseudogene 2143915989139161654Rat
41328132LOC120096600uncharacterized LOC120096600143943346339437629Rat
41073061LOC120096811small nucleolar RNA SNORA17143961071539610842Rat
1565933Rtraf-ps2RNA transcription, translation and transport factor, pseudogene 2143973808439791430Rat
41144709LOC120096601uncharacterized LOC120096601143974936039763419Rat
9198670LOC103692836uncharacterized LOC103692836143976352839775762Rat
41299431LOC120096796small nucleolar RNA SNORA48143980705839807196Rat
1586204Hspd1-ps2heat shock protein family D (Hsp60) member 1, pseudogene 2143995257739954795Rat
1564635Grxcr1glutaredoxin and cysteine rich domain containing 1144000416940126571Rat
41243425LOC120096602uncharacterized LOC120096602144023267440243612Rat
1309619Atp8a1ATPase phospholipid transporting 8A1144031501340557572Rat
7504244LOC102547308uncharacterized LOC102547308144034595840348826Rat
41279334LOC120096603uncharacterized LOC120096603144035952540364571Rat
1565710Shisa3shisa family member 3144056367240568244Rat
41086856LOC120096535uncharacterized LOC120096535144060294640608991Rat
7621128LOC102547499uncharacterized LOC102547499144061905740622769Rat
11378147LOC108352744glyceraldehyde-3-phosphate dehydrogenase pseudogene144063372140634794Rat
41339146LOC120096604uncharacterized LOC120096604144070047440717094Rat
11440419LOC108352745uncharacterized LOC108352745144071725840752979Rat
1584735Bend4BEN domain containing 4144075304840788686Rat
11512407LOC108352852glyceraldehyde-3-phosphate dehydrogenase pseudogene144080916940810344Rat
1593180Slc30a9solute carrier family 30 member 9144081628440870992Rat
708371Tmem33transmembrane protein 33144088848540910715Rat
1560582Phox2bpaired-like homeobox 2b144106601241069202Rat
1305269Limch1LIM and calponin homology domains 1144111257941425185Rat
41251030LOC120096605uncharacterized LOC120096605144125597041257155Rat
41396064LOC120096849U2 spliceosomal RNA144130747441307627Rat
3928Uchl1ubiquitin C-terminal hydrolase L1144148503341495590Rat
40944653LOC120096871U6 spliceosomal RNA144149731241497418Rat
1562438Apbb2amyloid beta precursor protein binding family B member 2144155791841878622Rat
1310137Nsun7NOP2/Sun RNA methyltransferase family member 7144187750041935238Rat
41300422LOC120096757U6 spliceosomal RNA144204096842041072Rat
1563570RGD1563570similar to ribosomal protein S23144204574942046255Rat
41135427LOC120096606uncharacterized LOC120096606144204813142054952Rat
1359713Rbm47RNA binding motif protein 47144205329042191572Rat
621534Chrna9cholinergic receptor nicotinic alpha 9 subunit144223521842241939Rat
1598004Haus8-ps3HAUS augmin-like complex, subunit 8, pseudogene 3144232338442323749Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10135D14Wox11135141762256217622685Ratregion
10622D14Mgh3120141863134518631470Ratregion
10623D14Wox12194141864404318644232Ratregion
11030D14Mit4139144233688142337007Ratregion
33818D14Mit9249144187344441873686Ratregion
34102D14Mgh5150144187102241871196Ratregion
34214D14Mgh6145144165819041658327Ratregion
11482D14Wox13194141984803919848270Ratregion
11482D14Wox13194141985881119859012Ratregion
11483D14Wox17141985879219859003Ratregion
33551D14Mit6191141827449818274691Ratregion
33692D14Mit12140143766971937669857Ratregion
33772D14Mit3100143333435333334448Ratregion
36287D14Rat12153143915358139153750Ratregion
35319D14Rat16190144226252942262698Ratregion
35342D14Rat8132143032009230320216Ratregion
35465D14Rat13125143258323832583345Ratregion
37124D14Rat14200143115335031153547Ratregion
37136D14Rat105237143295352432953740Ratregion
37624D14Rat68246144104121141041453Ratregion
36520D14Rat7168142283307822833252Ratregion
34890D14Rat9130142803506828035204Ratregion
34965D14Rat10176143088377730883947Ratregion
35713D14Rat11172143905723739057404Ratregion
35723D14Rat25168144079326040793460Ratregion
35723D14Rat25168144079330740793460Ratregion
35939D14Rat15144144127559041275734Ratregion
39598D14Rat81202142119949321199724Ratregion
38232D14Rat56181144162500341625190Ratregion
40712D14Rat83228143107177431072011Ratregion
38408D14Rat65129143404961034049719Ratregion
38486D14Rat41140142658520526585343Ratregion
40104D14Rat99237142453123024531477Ratregion
38932D14Rat36145143076702530767156Ratregion
38984D14Rat31223144047624040476463Ratregion
39042D14Rat52135143482377234823917Ratregion
39088D14Rat63104144180629041806385Ratregion
39138D14Rat50232142541088525411143Ratregion
39174D14Rat55219142565635625656577Ratregion
41990D14Arb16120142121750821217635Ratregion
41992D14Arb17190141864401218644233Ratregion
41998D14Arb4246141762249617622741Ratregion
42002D14Arb6300142043920720439526Ratregion
43015D14Rat116146142766793827668085Ratregion
43016D14Rat117126143168038331680527Ratregion
42390D14Rat143119141821258418212709Ratregion
40930D14Rat82211142820319428203397Ratregion
41018D14Rat84115143247312332473250Ratregion
41690D14Rat102200141817462718174822Ratregion
41790D14Rat106245143220763432207871Ratregion
45163D14Got25175141797429517974470Ratregion
45164D14Got26138141815274618152886Ratregion
45165D14Got29133142034430420344439Ratregion
45166D14Got33254142565639825656652Ratregion
45167D14Got32197142443885524439049Ratregion
45169D14Got38253142772958727729840Ratregion
45170D14Got36122142820683028206952Ratregion
45171D14Got37176142798495727985134Ratregion
45172D14Got39139143038862130388760Ratregion
45173D14Got89263143051866230518925Ratregion
45174D14Got43134143439149434391628Ratregion
45175D14Got41128143210261632102744Ratregion
45176D14Got40244143289876132899005Ratregion
45177D14Got42253143397854533978795Ratregion
45178D14Got51264144136664741366913Ratregion
45179D14Got53238144158883841589076Ratregion
45181D14Got50191144204302642043215Ratregion
45182D14Got52157143904498239045139Ratregion
45183D14Got54273143889819738898470Ratregion
45184D14Got55118143848665038486768Ratregion
45187D14Got35119142746395527464076Ratregion
60762D14Wox10100141762256117622640Ratregion
60763D14Wox3191142137954621379735Ratregion
60765D14Wox5140143999825139998391Ratregion
60069D14Got57230143878170238781930Ratregion
60081D14Got86137144045373140453868Ratregion
625816D14Got56150143889818238898332Ratregion
625820D14Got90190143515928435159474Ratregion
60059D14Got2791141880112418801217Ratregion
60060D14Got28169141880108718801258Ratregion
60061D14Got30283141964900219649280Ratregion
60063D14Got44153143544203235442185Ratregion
60064D14Got45126143501109535011221Ratregion
738055D14Hmgc4247141984801919848266Ratregion
738057D14Hmgc5198142177574021775938Ratregion
738058D14Hmgc7216143626908236269300Ratregion
738059D14Hmgc3144141773143117731575Ratregion
738061D14Hmgc6155142368553923685694Ratregion
738061D14Hmgc6155142368553923685855Ratregion
738061D14Hmgc6155142368557123685694Ratregion
66561D14Mco1163144104891841049081Ratregion
66575D14Mco7338143755162137551970Ratregion
66577D14Mco8210142128638821286593Ratregion
66697D14Uia4227142250750422507731Ratregion
67231D14Arb18128142036015820360286Ratregion
1630300D14Got101124143275666532756789Ratregion
1630530D14Wox31290142042160720421896Ratregion
1628668D14Wox20184143305582933056013Ratregion
1641546D14Got102197143482371234823909Ratregion
1633391D14Got130171141797433417974505Ratregion
1634903D14Got119193143552646435526657Ratregion
1635397D14Wox19142043937820439524Ratregion
7205986Ppia150142100663421006784Ratregion
5038634BB23255183141942923919429322Ratregion
5036007PMC84675P1646143086409030864736Ratregion
5038904RH127399220142294759422947813Ratregion
5039006RH127459183141786069517860878Ratregion
5037051RH36296127143287500032875127Ratregion
5035647RH45623178144137653141376709Ratregion
5034153RH141568200143124966031249860Ratregion
5028793RH142349150143519009635190246Ratregion
5028827RH142480272144031918240319454Ratregion
5028827RH142480272144031918240319454Ratregion
5028867RH142631195143455675434556950Ratregion
5031610AU047746227143923176539231992Ratregion
5029135RH143653205144053365640533861Ratregion
5029311RH144316158143342901033429168Ratregion
5032119RH94451156143300612933006285Ratregion
5026810RH133620216143605920436059420Ratregion
5026864RH133820209143452947534529684Ratregion
5035130BE096355184141934132219341506Ratregion
5032369C87704114141951584719515961Ratregion
5027147WI-17713156142130128821301444Ratregion
5032567SHGC-6820792144111495941115051Ratregion
5027293AW557942109143489789934898008Ratregion
5027295C80280115141942893519429050Ratregion
5027297AW557551132141951594119516073Ratregion
5032815RH135403185143079371230793897Ratregion
5032909RH136935183142195577521955958Ratregion
5033017RH137289187143533843335338615Ratregion
5025000AU022345228143085095930851187Ratregion
5025002BB446153103142194468521944788Ratregion
5030321BE105744151142047497320475124Ratregion
5030493BF403317164144041005740410220Ratregion
5033279RH138249164143680509536805259Ratregion
5025326RH127888187143119920331199390Ratregion
502794338.MMHAP88FLE5.seq158142229442622294584Ratregion
5033467RH138942129142706719327067322Ratregion
5033487RH139013127143470433934704466Ratregion
5025774RH129612213143853845238538665Ratregion
5028253D4Mit35368142416042724160495Ratregion
5028261D5Mit306241143127548831275729Ratregion
5028444AI426615152144088589240886044Ratregion
5051390M86567121143722832137228442Ratregion
5051392AI118071132142083348420833616Ratregion
5055895RH144064138142637447926374617Ratregion
5056341RH144322172143666746336667635Ratregion
5054015RH142981172144048142640481597Ratregion
5056659RH144506104141850554418505648Ratregion
5054117RH143040134143607093836071072Ratregion
5059482BI291183150141780692017807070Ratregion
5057620BE095714152144056437640564528Ratregion
5057706BF386044153144087053740870690Ratregion
5055055RH143580112143421894734219059Ratregion
5058012BF386462187143430156234301749Ratregion
5055823RH144023264143540996635410230Ratregion
5058692BE102309169143416396234164131Ratregion
5052273M84607174143300869233008866Ratregion
5052442AI481521106144055638740556493Ratregion
5052779RH142269150144088584540885995Ratregion
5058916BF387243175143115763031157805Ratregion
5059036BF393957130143119704031197170Ratregion
5052863RH142317154142185529221855446Ratregion
5052943RH142364155144111465541114810Ratregion
5052961RH142374164143551629635516460Ratregion
5052965RH142376176143853829838538474Ratregion
5058254BI277850173144187777641877949Ratregion
5049920RH133758181144115844041158621Ratregion
5058372BG376722142141943274319432885Ratregion
5059130BE102897182144115276041152942Ratregion
5053287RH142561104143746936037469464Ratregion
5053471RH142668209143198651731986726Ratregion
5052857RH142314174143558940035590305Ratregion
5051260RH134531183141944156919441752Ratregion
5054207RH143092126142688107626881202Ratregion
5051627U14418107143608060636080713Ratregion
5051757RH94641171143226081232260983Ratregion
5051769RH94648153143608041236080565Ratregion
5051092RH134435206143457828734578493Ratregion
5041690RH129002187143591184835912035Ratregion
5040966RH128586219143226062532260844Ratregion
5044388RH1305740142187680321876981Ratregion
5044648RH130724209143361474133614950Ratregion
5044152RH130439218144088239940882617Ratregion
5046174RH131601187142663297726633164Ratregion
5046266RH131654202141943190719432110Ratregion
5046420RH131742191143553787935538070Ratregion
5044458RH130614194143421746334217656Ratregion
5046540RH131812216143361609333616655Ratregion
5047872RH132577182141787728617877468Ratregion
5049022RH133241198141933259419332792Ratregion
5049172RH133327185143204654732046732Ratregion
5046618RH131857220142365497323655193Ratregion
5047962RH132629191143489787634898067Ratregion
5049012RH133235189143193026831930457Ratregion
5049072RH133270180141954605019546230Ratregion
5048048RH132678203143457748934577692Ratregion
5049354RH133432196143085094730851143Ratregion
5049398RH133458184143163101631631200Ratregion
5047124RH132147209141942884419429053Ratregion
5047302RH132249203143128426431284467Ratregion
5048378RH132869186141932924219329428Ratregion
5048406RH132885212141944121219441424Ratregion
5048504RH132941180143859879038598970Ratregion
5042422RH129425157143119920331199360Ratregion
5049548RH133544194144219133742191531Ratregion
5039990RH128025187143199364731993834Ratregion
5040070RH128072181144078817240788353Ratregion
5042652RH129562210142032860420329657Ratregion
5039358RH127660197144055717140557368Ratregion
5039814RH127922217142065173020651948Ratregion
5040134RH128109186144148506641485252Ratregion
5043696RH130174169143161159431611763Ratregion
5071926RH135365189143414740834147597Ratregion
5072036RH135428197143560468335604880Ratregion
5072396RH136825250143361791533618780Ratregion
5074204RH137881177142194461921944796Ratregion
5076506RH139215174143080232330803044Ratregion
5074474RH138038152143901785539018007Ratregion
5075520RH138641144142050521120505355Ratregion
5076000RH138919164143668587636686040Ratregion
5076638RH139292133143419425934194392Ratregion
5075796RH138802158144111374041113898Ratregion
5078170RH140184216143475428834754504Ratregion
5078284RH140250197143523705735237254Ratregion
5079766RH141190204144187715841877363Ratregion
5079916RH141277216143128626631286482Ratregion
5080036RH141346180143546115835461338Ratregion
5080096RH141380200143562784435628044Ratregion
5080098RH141381185141930666019306840Ratregion
5078422RH140333248144050983340510081Ratregion
5070644RH134622198143359637633596574Ratregion
5073034RH137196180143465279134652971Ratregion
5079304RH140904220143119911531199335Ratregion
5073510RH137478213143197412031974333Ratregion
5071242RH134969216142112829721128513Ratregion
5070640RH134619193142116727821167471Ratregion
5070678RH134641193143198999531990188Ratregion
5073856RH137678216144142371741423933Ratregion
5073424RH137428208143355625033556459Ratregion
5071432RH135078200144187882041879020Ratregion
5071492RH135113180143591041835910597Ratregion
5061766AW533278157141978385619784013Ratregion
5061802AW52704392141902398119024073Ratregion
5061838AW533807152143723329337233445Ratregion
5066836AU048122216144087774040877956Ratregion
5068144AU047322140142925392429254064Ratregion
5068594AU047051192143062556730625759Ratregion
5068612AU047039231142860733028607561Ratregion
5068754AU046952108142569577425695884Ratregion
5068852AU046886238142766790127668139Ratregion
5068886AU046864229143348525133485483Ratregion
5068996AU046793201143167580331676008Ratregion
5069748AU029143134142124033421240463Ratregion
5070496Gsh2282143312583533126117Ratregion
5060098BF388492135142120298421203119Ratregion
5060272AW531051184143131534231315526Ratregion
5060344AW531504177142394885223949029Ratregion
5062002AI454088144143199234531992489Ratregion
5063652BE107907170143498865034988820Ratregion
5065316BE121426203143709332737093530Ratregion
5060436BE110064167142401834524018512Ratregion
5060674BE098844183143162111131621298Ratregion
5063820AW535324176143198891731989093Ratregion
5064370BF399140209144149221341492422Ratregion
5060204AI072690192143472051534720707Ratregion
5062074BF397398134142658280026582934Ratregion
5063528BF404311215143115763031157845Ratregion
5063562BI289920104143394297733943081Ratregion
5063608BE107836151142657432826574479Ratregion
5062318BE106508190141951573519515925Ratregion
5064422BI302173206141990277019902977Ratregion
5062824BI295036136141948864119488777Ratregion
5064532BF399306173143163963431639807Ratregion
5061240BE111373150143401749534017645Ratregion
5064708BE108365173143086088730861060Ratregion
5061502BE105338153142636484226364995Ratregion
5063244BI301572198144135834641358544Ratregion
5063246BI301575193143028753430287727Ratregion
5066546AU048293120142294107822941198Ratregion
5061610AA875648157143108270331082860Ratregion
5087052BM389183198143097044330970641Ratregion
5087526PMC275467P2208141762278117622989Ratregion
5082323BE119187173144055434540554518Ratregion
5086425AW529895205141943559819435803Ratregion
5087552PMC312758P2177143121618331216360Ratregion
5089937AU049453267143438734934387616Ratregion
5089313AU049082185143096738430967569Ratregion
5083705AI009635205143421680934217014Ratregion
5090365AU049708279144196552641965805Ratregion
5090713AU049919211143027977830279989Ratregion
5088395AU048544264143223407932234343Ratregion
5088797AU048779236144047624540476483Ratregion
5088989AU048888125143549544735495572Ratregion
5082669BE119975196143160720431607400Ratregion
5085850AI231703161141932426119324422Ratregion
5084462AI013730180144111524641115426Ratregion
5084530AI176955135141884474318844878Ratregion
5081074RH141950199144045963440459833Ratregion
5085228AI598408157141775846017758617Ratregion
5085274AI176044198141930715719307352Ratregion
5083621BI276488217143198877431988991Ratregion
5507587Alb1128141762198717622819Ratregion
5504072px-63c9212143986842239868634Ratregion
5507632D5Buc331172143660493536606107Ratregion
5507634UniSTS:1426321417143377449733775914Ratregion
5504885ha3026130142314500623145136Ratregion
5505030Gpx40143533811235338614Ratregion
5505835UniSTS:495883239142365344823653687Ratregion
5506047UniSTS:498239426143254805132548477Ratregion
5506869G46840210141906187019062080Ratregion
5506931G54151167143198999231990159Ratregion
5499889UniSTS:235209266141951580719516073Ratregion
5499507stSG6026120144183490941836169Ratregion
5499507stSG6026120144183496141836169Ratregion
5499885UniSTS:235197252143591178135912033Ratregion
5502361RH124614257141786153317861790Ratregion
5503412G34499109141784556517845674Ratregion
5501169PMC151834P1403144223562742236030Ratregion
5504734PMC86057P4438141762292017623358Ratregion
5501508D14S2921064143197739531978459Ratregion
5501679UniSTS:265677293142100676521007058Ratregion
5501720UniSTS:266988152142400776024007912Ratregion
5501938MARC_17835-17836:1025010330:1490144106588241066372Ratregion
5502627RH125924233141876873218768964Ratregion
5502847Arhgap11a0142108931021090044Ratregion
5502881Gabrb1693143608043536081128Ratregion
6484684D14Uwm13214142811832128118535Ratregion
6484686D14Uwm14262143161416631614428Ratregion
6480636D14Uwm1140143170701131707201Ratregion
6480638D14Uwm2220143367787733678087Ratregion
6480641D14Uwm3298143354871033549008Ratregion
6480643D14Uwm4240143247190232472125Ratregion
6484235D14Uwm5190143351459933514760Ratregion
6484237D14Uwm6389143355010433550483Ratregion
6484239D14Uwm7240143195765831957909Ratregion
6484241D14Uwm8300143237430032374766Ratregion
6484241D14Uwm8300143237447032374766Ratregion
6484243D14Uwm9210143275661332756819Ratregion
6484245D14Uwm10220143293431632934528Ratregion
6484247D14Uwm11190143309750833097688Ratregion
Position Markers

Flank 1: (D14Wox10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21417,622,561 - 17,622,640 (+)MAPPER
Rnor_6.01419,191,541 - 19,191,619NCBI
Rnor_5.01419,098,311 - 19,098,389UniSTS
RGSC_v3.41419,141,961 - 19,142,040RGD
RGSC_v3.41419,141,962 - 19,142,040UniSTS
RGSC_v3.11419,141,961 - 19,142,040RGD
Celera1416,987,723 - 16,987,801UniSTS
RH 3.4 Map14219.7UniSTS
RH 3.4 Map14219.7RGD
Cytogenetic Map14p22UniSTS
Peak: (D14Wox4)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01438,289,187 - 38,289,371NCBI
Rnor_5.01438,099,442 - 38,099,626UniSTS
RGSC_v3.41438,152,541 - 38,152,726RGD
RGSC_v3.41438,152,542 - 38,152,726UniSTS
RGSC_v3.11438,158,382 - 38,158,567RGD
Celera1434,967,653 - 34,967,837UniSTS
Cytogenetic Map14p11UniSTS
Flank 2: (D14Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21442,336,881 - 42,337,007 (+)MAPPER
Rnor_6.01443,957,503 - 43,957,628NCBI
Rnor_5.01443,776,512 - 43,776,637UniSTS
Rnor_5.01443,776,512 - 43,777,078UniSTS
RGSC_v3.41445,020,228 - 45,020,354RGD
RGSC_v3.41445,020,229 - 45,020,354UniSTS
RGSC_v3.11444,925,389 - 44,925,828RGD
Celera1441,490,248 - 41,490,386UniSTS
RH 2.0 Map14466.1RGD
FHH x ACI Map1439.47RGD
Cytogenetic Map14p11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)14381307418274691Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141487516830883947Rat
631528Scl11Serum cholesterol level QTL 114.9blood cholesterol amount (VT:0000180)blood total cholesterol level (CMO:0000051)141757341219726296Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
61413Eae10Experimental allergic encephalomyelitis QTL 103.5nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)141762268518274498Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Tcas4


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Tcas4  Tongue tumor susceptibility QTL 4  Tts4    Symbol updated 1299863 APPROVED
2004-09-08 Tts4  Tongue tumor susceptibility QTL 4  Tscc5  Tongue squamous cell carcinoma QTL 5  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general this region showed a high frequency of allelic loss (Loss of Heterozygosity) in tumors from animals treated with 4-nitroquinoline 1-oxide (4NQO) 631169