Lias (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 43,230,369 - 43,247,469 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 42,876,699 - 42,893,824 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 42,876,699 - 42,893,783 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 43,230,511 - 43,247,734 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 44,530,429 - 44,547,653 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 43,010,544 - 43,027,770 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 44,507,217 - 44,524,287 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 44,507,218 - 44,524,252 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 44,326,598 - 44,343,665 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 45,575,334 - 45,592,514 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 45,577,725 - 45,594,905 (-) | NCBI | | | | | Celera | 14 | 42,027,393 - 42,044,418 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | p11 | NCBI | | | | |
|
LIAS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 39,459,056 - 39,479,506 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 39,459,004 - 39,485,109 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 39,460,676 - 39,481,126 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 39,137,060 - 39,155,668 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 39,283,230 - 39,301,835 | NCBI | | | | | Celera | 4 | 39,898,493 - 39,917,063 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | p14 | NCBI | | | | | HuRef | 4 | 38,785,637 - 38,804,275 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 39,460,097 - 39,478,701 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 39,428,708 - 39,449,155 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Lias (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 65,548,840 - 65,567,766 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 65,548,840 - 65,568,036 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 65,391,497 - 65,410,423 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 65,391,497 - 65,410,693 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 65,782,736 - 65,800,446 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 65,670,632 - 65,688,342 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 62,668,175 - 62,685,891 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | C3.1 | NCBI | | | | | cM Map | 5 | 33.66 | NCBI | | | | |
|
Lias (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955443 | 7,889,467 - 7,907,437 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955443 | 7,889,274 - 7,907,560 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
LIAS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 39,648,364 - 39,666,896 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 39,840,401 - 39,858,931 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 33,787,804 - 33,806,289 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 39,639,960 - 39,657,805 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 39,639,960 - 39,657,805 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
LIAS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 72,973,527 - 72,989,522 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 72,949,512 - 72,989,487 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 75,520,382 - 75,536,407 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 73,746,941 - 73,762,971 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 73,746,936 - 73,762,912 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 73,013,540 - 73,029,564 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 73,159,817 - 73,175,837 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 73,546,343 - 73,562,369 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Lias (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 39,212,659 - 39,229,901 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936482 | 7,068,445 - 7,084,504 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936482 | 7,068,326 - 7,085,571 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
LIAS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 30,699,330 - 30,720,335 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 30,699,278 - 30,717,009 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 32,314,342 - 32,332,042 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
LIAS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 10,832,384 - 10,850,517 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 10,829,865 - 10,850,552 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 57,224,471 - 57,242,633 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Lias (Heterocephalus glaber - naked mole-rat) |
|