Dcun1d4 (defective in cullin neddylation 1 domain containing 4) - Rat Genome Database

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Gene: Dcun1d4 (defective in cullin neddylation 1 domain containing 4) Rattus norvegicus
Analyze
Symbol: Dcun1d4
Name: defective in cullin neddylation 1 domain containing 4
RGD ID: 1310422
Description: Predicted to enable cullin family protein binding activity; ubiquitin conjugating enzyme binding activity; and ubiquitin-like protein binding activity. Predicted to be involved in positive regulation of protein neddylation and protein neddylation. Predicted to be located in nucleus. Predicted to be part of ubiquitin ligase complex. Orthologous to human DCUN1D4 (defective in cullin neddylation 1 domain containing 4); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DCN1, defective in cullin neddylation 1, domain containing 4; DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae); DCN1-like protein 4; LOC360928; RGD1310422; similar to hypothetical protein MGC2714
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81435,006,792 - 35,087,285 (-)NCBIGRCr8
mRatBN7.21434,652,723 - 34,733,122 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1434,652,723 - 34,733,207 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1435,013,112 - 35,083,493 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01436,320,733 - 36,391,118 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01434,806,189 - 34,876,575 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01437,210,721 - 37,294,517 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,210,721 - 37,294,472 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01437,033,185 - 37,113,631 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41437,051,133 - 37,128,945 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11437,056,449 - 37,141,230 (-)NCBI
Celera1433,915,466 - 33,985,941 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 91 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcun1d4Rat(-)-epigallocatechin 3-gallate multiple interactionsISODCUN1D4 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of DCUN1D4 mRNACTDPMID:22079256
Dcun1d4Rat1,2-dimethylhydrazine decreases expressionISODcun1d4 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of DCUN1D4 mRNACTDPMID:22206623
Dcun1d4Rat17beta-estradiol increases expressionISODcun1d4 (Mus musculus)6480464Estradiol results in increased expression of DCUN1D4 mRNACTDPMID:39298647
Dcun1d4Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISODcun1d4 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of DCUN1D4 mRNACTDPMID:21570461
Dcun1d4Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of DCUN1D4 mRNACTDPMID:33387578
Dcun1d4Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of DCUN1D4 mRNACTDPMID:21346803
Dcun1d4Rat3,4-methylenedioxymethamphetamine increases expressionISODcun1d4 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of DCUN1D4 mRNACTDPMID:20188158
Dcun1d4Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISODCUN1D4 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of DCUN1D4 mRNACTDPMID:28628672
Dcun1d4Rat4,4'-sulfonyldiphenol multiple interactionsISODCUN1D4 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of DCUN1D4 mRNACTDPMID:28628672
Dcun1d4Rat4,4'-sulfonyldiphenol affects expressionISODcun1d4 (Mus musculus)6480464bisphenol S affects the expression of DCUN1D4 mRNACTDPMID:39298647
Dcun1d4Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of DCUN1D4 mRNACTDPMID:30047161
Dcun1d4Ratacetamide decreases expressionEXP 6480464acetamide results in decreased expression of DCUN1D4 mRNACTDPMID:31881176
Dcun1d4Ratacrylamide increases expressionEXP 6480464Acrylamide results in increased expression of DCUN1D4 mRNACTDPMID:28959563
Dcun1d4Rataflatoxin B1 decreases methylationISODCUN1D4 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of DCUN1D4 geneCTDPMID:27153756
Dcun1d4Ratall-trans-retinoic acid decreases expressionISODCUN1D4 (Homo sapiens)6480464Tretinoin results in decreased expression of DCUN1D4 mRNACTDPMID:33167477
Dcun1d4Ratamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of DCUN1D4 mRNACTDPMID:30047161
Dcun1d4Ratantirheumatic drug increases expressionISODCUN1D4 (Homo sapiens)6480464Antirheumatic Agents results in increased expression of DCUN1D4 mRNACTDPMID:24449571
Dcun1d4Rataristolochic acid A decreases expressionISODCUN1D4 (Homo sapiens)6480464aristolochic acid I results in decreased expression of DCUN1D4 mRNACTDPMID:33212167
Dcun1d4Ratbenzo[a]pyrene increases expressionISODcun1d4 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of DCUN1D4 mRNACTDPMID:22228805
Dcun1d4Ratbenzo[a]pyrene diol epoxide I decreases expressionISODCUN1D4 (Homo sapiens)64804647 more ...CTDPMID:26238291

1 to 20 of 91 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcun1d4Ratpositive regulation of protein neddylation involved_inISODCUN1D4 (Homo sapiens)1624291 PMID:23201271 and PMID:26906416RGDPMID:23201271 and PMID:26906416
Dcun1d4Ratpositive regulation of protein neddylation involved_inIEAUniProtKB:Q92564 and ensembl:ENSP000003346251600115GO_REF:0000107EnsemblGO_REF:0000107
Dcun1d4Ratprotein neddylation involved_inIBAPANTHER:PTN000264493 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcun1d4Ratnucleus located_inIEAUniProtKB:Q92564 and ensembl:ENSP000003346251600115GO_REF:0000107EnsemblGO_REF:0000107
Dcun1d4Ratnucleus located_inISODCUN1D4 (Homo sapiens)1624291 PMID:26906416RGDGO_REF:0000054 and PMID:26906416
Dcun1d4Ratubiquitin ligase complex part_ofIBAPANTHER:PTN000264493 and UniProtKB:Q96GG91600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


Dcun1d4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81435,006,792 - 35,087,285 (-)NCBIGRCr8
mRatBN7.21434,652,723 - 34,733,122 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1434,652,723 - 34,733,207 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1435,013,112 - 35,083,493 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01436,320,733 - 36,391,118 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01434,806,189 - 34,876,575 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01437,210,721 - 37,294,517 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,210,721 - 37,294,472 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01437,033,185 - 37,113,631 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41437,051,133 - 37,128,945 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11437,056,449 - 37,141,230 (-)NCBI
Celera1433,915,466 - 33,985,941 (-)NCBICelera
Cytogenetic Map14p11NCBI
DCUN1D4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38451,833,884 - 51,916,837 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl451,843,000 - 51,916,837 (+)EnsemblGRCh38hg38GRCh38
GRCh37452,709,319 - 52,783,003 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36452,404,033 - 52,477,760 (+)NCBINCBI36Build 36hg18NCBI36
Celera450,204,352 - 50,278,086 (+)NCBICelera
Cytogenetic Map4q12NCBI
HuRef448,650,544 - 48,724,459 (+)NCBIHuRef
CHM1_1452,744,405 - 52,818,078 (+)NCBICHM1_1
T2T-CHM13v2.0455,319,835 - 55,402,788 (+)NCBIT2T-CHM13v2.0
Dcun1d4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39573,638,353 - 73,718,137 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl573,638,343 - 73,718,137 (+)EnsemblGRCm39 Ensembl
GRCm38573,481,010 - 73,560,794 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl573,481,000 - 73,560,794 (+)EnsemblGRCm38mm10GRCm38
MGSCv37573,882,321 - 73,952,025 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36573,770,217 - 73,839,921 (+)NCBIMGSCv36mm8
Celera570,744,312 - 70,824,269 (+)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map538.85NCBI
Dcun1d4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544718,562,946 - 18,652,782 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544718,562,946 - 18,641,179 (-)NCBIChiLan1.0ChiLan1.0
DCUN1D4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2377,903,936 - 77,977,102 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1478,108,033 - 78,181,204 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0472,050,161 - 72,123,339 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1478,601,430 - 78,674,553 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl478,604,682 - 78,674,986 (-)Ensemblpanpan1.1panPan2
DCUN1D4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11344,812,951 - 44,894,654 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1344,812,932 - 44,891,454 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1344,765,716 - 44,847,533 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01345,415,171 - 45,496,926 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1345,426,998 - 45,496,923 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11345,101,976 - 45,171,640 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01344,625,094 - 44,706,777 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01345,502,139 - 45,583,870 (+)NCBIUU_Cfam_GSD_1.0
Dcun1d4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528531,233,934 - 31,315,687 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648214,982,588 - 15,064,321 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648214,993,097 - 15,064,305 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCUN1D4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl838,982,680 - 39,060,715 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1838,982,685 - 39,060,719 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2841,146,253 - 41,236,200 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DCUN1D4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1716,525,560 - 16,599,057 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl716,528,487 - 16,598,900 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606617,592,908 - 17,669,493 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dcun1d4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476117,792,569 - 17,871,363 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476117,790,671 - 17,871,602 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Dcun1d4
281 total Variants

Predicted Target Of
Summary Value
Count of predictions:376
Count of miRNA genes:219
Interacting mature miRNAs:264
Transcripts:ENSRNOT00000065458
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 15 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
7387267Uae42Urinary albumin excretion QTL 420.61urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)142216796767167967Rat

1 to 10 of 15 rows
RH139013  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21434,704,339 - 34,704,466 (+)MAPPERmRatBN7.2
Rnor_6.01437,262,665 - 37,262,791NCBIRnor6.0
Rnor_5.01437,085,129 - 37,085,255UniSTSRnor5.0
RGSC_v3.41437,103,434 - 37,103,560UniSTSRGSC3.4
Celera1433,967,037 - 33,967,163UniSTS
Cytogenetic Map14p11UniSTS
AI072690  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21434,720,515 - 34,720,707 (+)MAPPERmRatBN7.2
Rnor_6.01437,281,887 - 37,282,078NCBIRnor6.0
Rnor_5.01437,101,021 - 37,101,212UniSTSRnor5.0
RGSC_v3.41437,126,231 - 37,126,422UniSTSRGSC3.4
Celera1433,983,226 - 33,983,417UniSTS
Cytogenetic Map14p11UniSTS
RH137196  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21434,652,791 - 34,652,971 (+)MAPPERmRatBN7.2
Rnor_6.01437,210,790 - 37,210,969NCBIRnor6.0
Rnor_5.01437,033,254 - 37,033,433UniSTSRnor5.0
RGSC_v3.41437,051,202 - 37,051,381UniSTSRGSC3.4
Celera1433,915,535 - 33,915,714UniSTS
Cytogenetic Map14p11UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 17 of 17 rows
RefSeq Transcripts NM_001108359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001436983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001436984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001436985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006250907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039092177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 17 of 17 rows

Ensembl Acc Id: ENSRNOT00000065458   ⟹   ENSRNOP00000059462
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1434,652,723 - 34,723,231 (-)Ensembl
Rnor_6.0 Ensembl1437,210,721 - 37,284,601 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000081087   ⟹   ENSRNOP00000069290
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1434,652,730 - 34,733,207 (-)Ensembl
Rnor_6.0 Ensembl1437,213,828 - 37,294,472 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000102842   ⟹   ENSRNOP00000094828
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1434,652,723 - 34,723,231 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117852   ⟹   ENSRNOP00000087468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1434,652,730 - 34,706,645 (-)Ensembl
RefSeq Acc Id: NM_001108359   ⟹   NP_001101829
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,792 - 35,077,289 (-)NCBI
mRatBN7.21434,652,723 - 34,723,231 (-)NCBI
Rnor_6.01437,210,721 - 37,284,601 (-)NCBI
Rnor_5.01437,033,185 - 37,113,631 (-)NCBI
RGSC_v3.41437,051,133 - 37,128,945 (-)RGD
Celera1433,915,466 - 33,985,941 (-)RGD
Sequence:
RefSeq Acc Id: XM_006250907   ⟹   XP_006250969
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,077,310 (-)NCBI
mRatBN7.21434,652,730 - 34,723,247 (-)NCBI
Rnor_6.01437,210,728 - 37,284,621 (-)NCBI
Rnor_5.01437,033,185 - 37,113,631 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599288   ⟹   XP_017454777
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,087,285 (-)NCBI
mRatBN7.21434,652,730 - 34,733,121 (-)NCBI
Rnor_6.01437,210,728 - 37,294,517 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039092176   ⟹   XP_038948104
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,087,212 (-)NCBI
mRatBN7.21434,652,730 - 34,733,122 (-)NCBI
RefSeq Acc Id: XM_039092177   ⟹   XP_038948105
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,076,335 (-)NCBI
mRatBN7.21434,652,730 - 34,722,284 (-)NCBI
RefSeq Acc Id: XM_063273337   ⟹   XP_063129407
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,077,336 (-)NCBI
RefSeq Acc Id: XM_063273338   ⟹   XP_063129408
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,012,393 - 35,087,211 (-)NCBI
RefSeq Acc Id: XM_063273339   ⟹   XP_063129409
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,006,799 - 35,057,524 (-)NCBI
RefSeq Acc Id: XM_063273340   ⟹   XP_063129410
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81435,012,393 - 35,087,202 (-)NCBI
1 to 5 of 13 rows
1 to 5 of 13 rows
RefSeq Acc Id: NP_001101829   ⟸   NM_001108359
- UniProtKB: D4A0F7 (UniProtKB/TrEMBL),   A6JD31 (UniProtKB/TrEMBL),   A0A8I6A381 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006250969   ⟸   XM_006250907
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017454777   ⟸   XM_017599288
- Peptide Label: isoform X1
- UniProtKB: A0A0G2JUZ4 (UniProtKB/TrEMBL),   A0A8I6A381 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059462   ⟸   ENSRNOT00000065458
Ensembl Acc Id: ENSRNOP00000069290   ⟸   ENSRNOT00000081087
DCUN1

Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2JUZ4-F1-model_v2 AlphaFold A0A0G2JUZ4 1-306 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699291
Promoter ID:EPDNEW_R9816
Type:initiation region
Name:Dcun1d4_1
Description:defective in cullin neddylation 1 domain containing 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9817  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01437,284,600 - 37,284,660EPDNEW
RGD ID:13699299
Promoter ID:EPDNEW_R9817
Type:multiple initiation site
Name:Dcun1d4_2
Description:defective in cullin neddylation 1 domain containing 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9816  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01437,294,480 - 37,294,540EPDNEW


1 to 28 of 28 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-15869 BioCyc
Ensembl Genes ENSRNOG00000002152 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065458 ENTREZGENE
  ENSRNOT00000065458.3 UniProtKB/TrEMBL
  ENSRNOT00000081087 ENTREZGENE
  ENSRNOT00000081087.2 UniProtKB/TrEMBL
  ENSRNOT00000102842 ENTREZGENE
  ENSRNOT00000102842.1 UniProtKB/TrEMBL
  ENSRNOT00000117852.1 UniProtKB/TrEMBL
  ENSRNOT00000130847 ENTREZGENE
Gene3D-CATH 1.10.238.200 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro DCN-prot UniProtKB/TrEMBL
  DCN1-like_PONY UniProtKB/TrEMBL
  DUF298 UniProtKB/TrEMBL
KEGG Report rno:360928 UniProtKB/TrEMBL
NCBI Gene 360928 ENTREZGENE
PANTHER DCN1-LIKE PROTEIN 4 UniProtKB/TrEMBL
  DUF298 UniProtKB/TrEMBL
Pfam DUF298 UniProtKB/TrEMBL
PhenoGen Dcun1d4 PhenoGen
PROSITE DCUN1 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000002152 RatGTEx
UniProt A0A0G2JUZ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A381 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6B1J8 ENTREZGENE, UniProtKB/TrEMBL
  A6JD31 ENTREZGENE, UniProtKB/TrEMBL
  D4A0F7 ENTREZGENE, UniProtKB/TrEMBL
1 to 28 of 28 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-20 Dcun1d4  defective in cullin neddylation 1 domain containing 4  Dcun1d4  DCN1, defective in cullin neddylation 1, domain containing 4  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-07-09 Dcun1d4  DCN1, defective in cullin neddylation 1, domain containing 4  Dcun1d4  DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Dcun1d4  DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)   Dcun1d4_predicted  DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Dcun1d4_predicted  DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) (predicted)  RGD1310422_predicted  similar to hypothetical protein MGC2714 (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-20 RGD1310422_predicted  similar to hypothetical protein MGC2714 (predicted)  LOC360928_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360928_predicted  similar to hypothetical protein MGC2714 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL