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Gene: Spata18 (spermatogenesis associated 18) Rattus norvegicus
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Symbol: Spata18
Name: spermatogenesis associated 18
Description: Predicted to be involved in cellular response to DNA damage stimulus; mitochondrial protein catabolic process; and mitophagy by induced vacuole formation. Localizes to the cytoplasm and sperm flagellum. Orthologous to human SPATA18 (spermatogenesis associated 18); INTERACTS WITH bisphenol A; furan; lead nitrate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: MGC93900; mitochondria-eating protein; spermatid-expressing gene 1 protein; spermatid-expressing gene-1; spermatogenesis-associated protein 18; spetex-1
Orthologs:
Homo sapiens (human) : SPATA18 (spermatogenesis associated 18)  HGNC  Alliance
Mus musculus (house mouse) : Spata18 (spermatogenesis associated 18)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata18 (spermatogenesis associated 18)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA18 (spermatogenesis associated 18)
Canis lupus familiaris (dog) : SPATA18 (spermatogenesis associated 18)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata18 (spermatogenesis associated 18)
Sus scrofa (pig) : SPATA18 (spermatogenesis associated 18)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01437,081,529 - 37,108,245 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,081,427 - 37,108,341 (-)Ensembl
Rnor_5.01436,904,424 - 36,931,151 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41436,928,255 - 36,954,960 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11436,930,691 - 36,957,395 (-)NCBI
Celera1433,794,494 - 33,821,211 (-)NCBICelera
Cytogenetic Map14p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735208
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.