UniSTS:265677 Marker Search Result - Rat Genome Database

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Marker: UniSTS:265677

Symbol: UniSTS:265677
Previously known as:
RGD ID: 5501679
Expected Size: 293 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21421,006,765 - 21,007,058 (+)MAPPERmRatBN7.2
mRatBN7.2441,829,100 - 41,829,392 (+)MAPPERmRatBN7.2
Rnor_6.01422,707,130 - 22,707,422NCBIRnor6.0
Rnor_5.01422,609,939 - 22,610,231UniSTSRnor5.0
RGSC_v3.41422,613,076 - 22,613,368UniSTSRGSC3.4
Cytogenetic Map14q21UniSTS
Is Marker For: Genes:   Ppia   Ppial4d   LOC100362969  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CCAGGGTGGTGACTTTACAC
Reverse Primer CGGAAATGGTGATCTTCTTG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2321083Ppial4dpeptidylprolyl isomerase A (cyclophilin A)-like 4D142100652221007284Rat
6493676LOC100911252peptidyl-prolyl cis-trans isomerase A-like44182887341829619Rat

1 to 21 of 21 rows
RefSeq Transcripts NM_017101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_002728090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC059141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH618050.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M19533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M25637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 21 of 21 rows


1 to 10 of 78 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141103081230320092Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062228035204Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat

1 to 10 of 78 rows


Database
Acc Id
Source(s)
NCBI Gene 100360977 UniSTS
  100362969 UniSTS
  25518 UniSTS