Scl59 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Scl59 (Serum cholesterol level QTL 59) Rattus norvegicus

Symbol: Scl59
Name: Serum cholesterol level QTL 59
RGD ID: 2300197
Trait: blood cholesterol amount   (VT:0000180)    
Measurement Type: serum total cholesterol level   (CMO:0000363)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01478,446,303 - 110,402,569RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01478,419,915 - 110,102,984RGDRnor5.0
RGSC_v3.41479,256,324 - 107,101,727RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: EHC.BN-(D14Rat43-D14Rat132)/Kyu 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Ppp4r3b is a candidate Gene for Scl59

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Asahina M, etal., J Lipid Res. 2008 Aug 27.
Related QTLs

Related QTL Description Reference
Scl45 sub_region RGD:2300117


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2494Ddcdopa decarboxylase149190591991996816Rat
2058Adra2cadrenoceptor alpha 2C148073030780732010Rat
3583Rnf4ring finger protein 4148165840081679756Rat
3978Ywhahtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta148305304183062424Rat
619959Afap1actin filament associated protein 1147992313280035096Rat
2262Camk2bcalcium/calmodulin-dependent protein kinase II beta148620887686297727Rat
61858Grk4G protein-coupled receptor kinase 4148126170881339516Rat
3313Pgam2phosphoglycerate mutase 2148604500586047116Rat
70909HgfacHGF activator148096690280973525Rat
70941Dbnldrebrin-like148602933586044364Rat
2874Igfbp3insulin-like growth factor binding protein 3148745764787465374Rat
3169Nf2neurofibromin 2148499690585088547Rat
2064Ap1b1adaptor related protein complex 1 subunit beta 1148523065285281806Rat
619736Rab1aRAB1A, member RAS oncogene family14104475082104500176Rat
61873Ramp3receptor activity modifying protein 3148692222386939722Rat
70897Ykt6YKT6 v-SNARE homolog148619601886207057Rat
3713Slc5a1solute carrier family 5 member 1148291044882975303Rat
62056Limk2LIM domain kinase 2148356404883641996Rat
3237Otx1orthodenticle homeobox 114106861556106864933Rat
3564Rgs12regulator of G-protein signaling 12148097523981069519Rat
70947Grpel1GrpE-like 1, mitochondrial147945895179464782Rat
3072Mdh1malate dehydrogenase 114106378349106393642Rat
620681Tcn2transcobalamin 2148417399284189299Rat
727937Cct4chaperonin containing TCP1 subunit 414107767392107780270Rat
68337Htthuntingtin148110513981254637Rat
621851Wapwhey acidic protein148689794886900417Rat
620541Inpp5jinositol polyphosphate-5-phosphatase J148373086183742016Rat
620700Lrpap1LDL receptor related protein associated protein 1148091128180923290Rat
708584Spon2spondin 2148281515882824529Rat
708484Slc35e4solute carrier family 35, member E4148416397184170835Rat
2670Gckglucokinase148614914686191589Rat
69230Ppp3r1protein phosphatase 3, regulatory subunit B, alpha14100311224100360879Rat
69245Acox3acyl-CoA oxidase 3, pristanoyl148031320280358115Rat
3159Nefhneurofilament heavy148518157285191557Rat
620789Kremen1kringle containing transmembrane protein 1148544120985503661Rat
620714Fgfr3fibroblast growth factor receptor 3148227232282287739Rat
3372Ppiapeptidylprolyl isomerase A148667377586677443Rat
1303073Xbp1X-box binding protein 1148575373685758820Rat
1303135Npc1l1NPC1 like intracellular cholesterol transporter 1148634594686560694Rat
1304928Hmx1H6 family homeobox 1148054055880544607Rat
2441Ctbp1C-terminal binding protein 1148276210982789350Rat
1302948Tacc3transforming, acidic coiled-coil containing protein 3148233628382350069Rat
1304954Pold2DNA polymerase delta 2, accessory subunit148611141686117578Rat
735187Ankrd36ankyrin repeat domain 36148581480985931577Rat
620812Sec14l3SEC14-like lipid binding 3148430646684317241Rat
2543Egfrepidermal growth factor receptor1499919485100104136Rat
620865LifLIF, interleukin 6 family cytokine148448265284500574Rat
621779Sec14l2SEC14-like lipid binding 2148433559484360354Rat
620496Cpzcarboxypeptidase Z148040294680426203Rat
1304999Fam161aFAM161 centrosomal protein A14107785029107803765Rat
1306319Tmed4transmembrane p24 trafficking protein 4148639032786395151Rat
620920Ppp2r2cprotein phosphatase 2, regulatory subunit B, gamma147867921478763175Rat
620517Xpo1exportin 114108007421108049088Rat
1305153Ccdc96coiled-coil domain containing 96147944315179445591Rat
1306014Mrps24mitochondrial ribosomal protein S24148594776385951891Rat
1306016Myo1gmyosin IG148678124386796393Rat
1305110RGD1305110similar to KIAA1841 protein14108305343108376618Rat
1305556Nelfanegative elongation factor complex member A148209383782117913Rat
1306922Aebp1AE binding protein 1148610125386111323Rat
1304991Thoc5THO complex 5148513821985171729Rat
1306371UvssaUV-stimulated scaffold protein A148262102882658912Rat
1305093Mxd4Max dimerization protein 4148181941581833456Rat
1304993Drg1developmentally regulated GTP binding protein 1148346054083476568Rat
1306037Bloc1s4biogenesis of lysosomal organelles complex 1 subunit 4147901380879015108Rat
1305566Upp1uridine phosphorylase 1148931423489334060Rat
1306402Pus10pseudouridine synthase 1014108411941108479696Rat
1305469Prr14lproline rich 14-like148322655283293823Rat
1305719Nat8lN-acetyltransferase 8-like148204161682048251Rat
1307171Ahsa2activator of HSP90 ATPase homolog 214108262795108274000Rat
1307955Nsd2nuclear receptor binding SET domain protein 2148211921082196501Rat
1307414Lgalslgalectin-like14105047915105055421Rat
1307258Ewsr1EWS RNA-binding protein 1148532210585350826Rat
1304774Castor1cytosolic arginine sensor for mTORC1 subunit 1148444755284457396Rat
2041Add1adducin 1148136746681426610Rat
1307368Psapl1prosaposin-like 1147971169479714254Rat
727882Pno1partner of NOB1 homolog14100364192100372760Rat
735146Slc1a4solute carrier family 1 member 414104582884104612417Rat
1305895Abca13ATP binding cassette subfamily A member 13148938451289876748Rat
1306100Rasl10aRAS-like, family 10, member A148531183385313211Rat
1305605Nop14NOP14 nucleolar protein148134014181361277Rat
1305610Sh3tc1SH3 domain and tetratricopeptide repeats 1148018481480229207Rat
1309737Tbrg4transforming growth factor beta regulator 4148687680086885603Rat
1308247PolmDNA polymerase mu148606937886079327Rat
1303094Ablim2actin binding LIM protein family, member 2148004421780169491Rat
1310210Ugp2UDP-glucose pyrophosphorylase 214106208174106249322Rat
1309318Adcy1adenylate cyclase 1148731197087429880Rat
1310505Osbp2oxysterol binding protein 2148394397684107031Rat
1559814Pes1pescadillo ribosomal biogenesis factor 1148421160084227980Rat
1311199Peli1pellino E3 ubiquitin protein ligase 114106008086106062566Rat
1308380Trmt44tRNA methyltransferase 44148036149080379408Rat
1309877Maeamacrophage erythroblast attacher, E3 ubiquitin ligase148266424882697673Rat
1310826Actr2actin related protein 214104338486104375840Rat
1310828Tmem129transmembrane protein 129, E3 ubiquitin ligase148235073482356084Rat
1311535Depdc5DEP domain containing 5, GATOR1 subcomplex subunit148308900083219576Rat
1310419Nipsnap1nipsnap homolog 1148511357885137457Rat
1310842Morc2MORC family CW-type zinc finger 2148388913883930263Rat
1311771Commd1copper metabolism domain containing 114107664321107759974Rat
1311641Tbc1d10aTBC1 domain family, member 10a148441732084445034Rat
1310337Papolgpoly(A) polymerase gamma14108624359108658371Rat
1303195Ddx56DEAD-box helicase 56148637893786387637Rat
1312002Coblcordon-bleu WH2 repeat protein149234194992497169Rat
1310738Rnf215ring finger protein 215148436844084374879Rat
1560394RGD1560394RGD1560394148205368482055290Rat
1308373Cnrip1cannabinoid receptor interacting protein 114100217547100247235Rat
1310972Mtmr3myotubularin related protein 3148470155984820487Rat
1309634Fam193afamily with sequence similarity 193, member A148151589781638919Rat
1310566Tmem17transmembrane protein 1714107268235107308546Rat
1309923Bcl11aBAF chromatin remodeling complex subunit BCL11A14108826717108921197Rat
1310621Sorcs2sortilin-related VPS10 domain containing receptor 2147953891179912333Rat
1309304Spred2sprouty-related, EVH1 domain containing 214104268362104290206Rat
1309993Tbc1d14TBC1 domain family, member 14147917227279438765Rat
1310151Zfyve28zinc finger FYVE-type containing 28148172551381811142Rat
1310216Smtnsmoothelin148375514183776871Rat
1310604Ehbp1EH domain binding protein 114106871426107160224Rat
1309256Zmiz2zinc finger, MIZ-type containing 2148664587586662419Rat
1309101Cep68centrosomal protein 6814104501759104523330Rat
1306929Dusp18dual specificity phosphatase 18148415048484169645Rat
1310077B3gnt2UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 214107592336107617189Rat
1308262Myl7myosin light chain 7148614477086147075Rat
1307112Fignl1fidgetin-like 1149189590291904474Rat
1305323Pla2g3phospholipase A2, group III148372482883730614Rat
1308337Patz1POZ (BTB) and AT hook containing zinc finger 1148350976383528898Rat
1308269Plekpleckstrin14100151518100184192Rat
1308840Man2b2mannosidase, alpha, class 2B, member 2147893995978964961Rat
1309870Spata48spermatogenesis associated 48149155678291614099Rat
1307717Tnip2TNFAIP3 interacting protein 2148148793481505889Rat
1309501WdpcpWD repeat containing planar cell polarity effector14106393959106759511Rat
1310682Pex13peroxisomal biogenesis factor 1314108394299108411994Rat
1308775RGD1308775similar to RIKEN cDNA 4921536K21148414196484150607Rat
1310588Sh3bp2SH3-domain binding protein 2148143544581473013Rat
1308067Ccm2CCM2 scaffold protein148681272886859408Rat
1359678Letm1leucine zipper and EF-hand containing transmembrane protein 1148222779082267298Rat
1561824Zrsr1zinc finger (CCCH type), RNA binding motif and serine/arginine rich 114107750162107751895Rat
1564681Urgcpupregulator of cell proliferation148595772686002227Rat
1564874Nkx1-1NK1 homeobox 1148260353882607031Rat
1563743RGD1563743similar to ORF14107827757107830713Rat
1559824NacadNAC alpha domain containing148686060786868605Rat
628718Vps54VPS54 subunit of GARP complex14106153407106207715Rat
1560908Eif4enif1eukaryotic translation initiation factor 4E nuclear import factor 1148341284383455694Rat
1561762Ccdc117coiled-coil domain containing 117148576339685772762Rat
1566416Dok7docking protein 7148092540980963454Rat
1561359Ogdhoxoglutarate dehydrogenase148641492486481903Rat
1311203Pik3ip1phosphoinositide-3-kinase interacting protein 1148355939783572481Rat
1565037Selenomselenoprotein M148375239383754975Rat
1311206Gas2l1growth arrest-specific 2 like 1148530844385318475Rat
1563315Fam53afamily with sequence similarity 53, member A148237508682416004Rat
1311231RelREL proto-oncogene, NF-kB subunit14108490794108517582Rat
1563985Zpbpzona pellucida binding protein149136067091556406Rat
1564049Sertad2SERTA domain containing 214104786649104890022Rat
1311920Aftphaftiphilin14104921633104975763Rat
1563337LOC498414LRRGT00197149082295190864917Rat
1562401Jakmip1janus kinase and microtubule interacting protein 1147840344878523108Rat
1563863Wdr92WD repeat domain 9214100373129100394143Rat
1562776RGD1562776similar to ribosomal protein L36148887138988875610Rat
1308120Htra3HtrA serine peptidase 3148024814080276534Rat
1559465Purbpurine rich element binding protein B148673687686739335Rat
1561422Ascc2activating signal cointegrator 1 complex subunit 2148487350784913923Rat
1560623RGD1560623similar to ribosomal protein S24148589309685893551Rat
1560636Sfi1SFI1 centrin binding protein148334190083412733Rat
1559774Zmat5zinc finger, matrin type 5148493784384968898Rat
628631Mrfap1Morf4 family associated protein 1147897338478975161Rat
1564174Tns3tensin 3148867392288907874Rat
1359269Cabp7calcium binding protein 7148496812584978242Rat
1333524Olr1806-psolfactory receptor pseudogene 180614102113068102113705Rat
1311477Sf3a1splicing factor 3a, subunit 1148439318284413931Rat
1309073Fbxo48F-box protein 4814100129835100140400Rat
1333003Olr1827-psolfactory receptor pseudogene 182714101753371101753493Rat
1311827Rhbdd3rhomboid domain containing 3148535085285357029Rat
1311900Mfsd10major facilitator superfamily domain containing 10148136259481366208Rat
1584653Ccdc157coiled-coil domain containing 157148437616784393235Rat
1566234Grb10growth factor receptor bound protein 10149202185192122249Rat
68954Wfs1wolframin ER transmembrane glycoprotein147864070778665224Rat
1587626LOC688553hypothetical protein LOC688553148925310289272283Rat
1565447Hormad2HORMA domain containing 2148457685684662237Rat
2872Igfbp1insulin-like growth factor binding protein 1148744871687453783Rat
1586609LOC686087similar to motile sperm domain containing 1148769948187701956Rat
1583879LOC691494similar to Reticulocalbin-1 precursor149453618794546337Rat
1564724Pkd1l1polycystin 1 like 1, transient receptor potential channel interacting148904794989193579Rat
1562979Ikzf1IKAROS family zinc finger 1149178228191867828Rat
1561605Tada2btranscriptional adaptor 2B147944605779457341Rat
1565796Msantd1Myb/SANT DNA binding domain containing 1148109167581105065Rat
1565810Sec14l4SEC14-like lipid binding 4148427454684290594Rat
1564567Cfap99cilia and flagella associated protein 99148168542881725165Rat
1564777Rnf185ring finger protein 185148364840083685273Rat
1560957Etaa1l1Ewing tumor-associated antigen 1-like 1149719607997199067Rat
1566206LOC501396hypothetical protein LOC501396149432103094613150Rat
1560600C1dC1D nuclear receptor corepressor14100415645100427878Rat
1563894RGD1563894similar to mortality factor 4 like 1149047085390471678Rat
1565181Usp34ubiquitin specific peptidase 3414108060653108264706Rat
1582940LOC688967similar to CG31156-PB, isoform B149334736493357539Rat
1565227LOC301748similar to RIKEN cDNA 1700001E04149455289194644351Rat
1359705Mtfp1mitochondrial fission process 1148433022384334063Rat
1561286RGD1561286similar to glyceraldehyde-3-phosphate dehydrogenase149349415093495283Rat
1589624Vwc2von Willebrand factor C domain containing 2149120114191348219Rat
1592384LOC688176similar to CG14646-PA148238035582381443Rat
1593771Znrf3zinc and ring finger 3148552709985586294Rat
1591358LOC685655similar to CG7638-PA148950150489503401Rat
1587340Etaa1ETAA1 activator of ATR kinase14102290655102293674Rat
1591457Eif6-ps1eukaryotic translation initiation factor 6, pseudogene 1148697927786980041Rat
1587865H2az2H2A.Z variant histone 2148668778286706639Rat
1590593LOC680567similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)148695647186957545Rat
1584682Slbpstem-loop binding protein148235691682366368Rat
1585482Meis1Meis homeobox 114103182178103321809Rat
1589907Rpl38-ps2ribosomal protein L38, pseudogene 214104452887104453167Rat
1585012Osmoncostatin M148445748784469426Rat
1589839LOC690942similar to Spindlin-like protein 3 (SPIN-3) (Protein DXF34)149640699396407678Rat
1583379Gal3st1galactose-3-O-sulfotransferase 1148423147384247371Rat
1588187Snrpg-ps1small nuclear ribonucleoprotein polypeptide G, pseudogene 1148342480683425200Rat
1590908LOC302228similar to Spindlin-like protein 2 (SPIN-2)149629633096303468Rat
1585117LOC690096similar to ribosomal protein L2814107349377107365061Rat
1595831LOC364236similar to 40S ribosomal protein S19148694202186952329Rat
1595126Uqcr10ubiquinol-cytochrome c reductase, complex III subunit X148493548084937741Rat
1595838LOC364218similar to Deoxycytidine kinase (dCK)14108305832108306897Rat
1596197Vstm2aV-set and transmembrane domain containing 2A149952899699558304Rat
1596170Sec61gSEC61 translocon subunit gamma149977458999780964Rat
1592623Frg2FSHD region gene 2148577992785792527Rat
1591723Haus3HAUS augmin-like complex, subunit 3148183777281857458Rat
1595639LOC503350similar to reticulocalbin149434635494347712Rat
1596848LOC680039hypothetical protein LOC680039147926105279325916Rat
1591079LOC689548similar to ribosomal protein S214104031887104032575Rat
1591975Sun3Sad1 and UNC84 domain containing 3148921538689253585Rat
1591976Hus1HUS1 checkpoint clamp component148919408689208825Rat
1593795Emid1EMI domain containing 1148535722185400396Rat
1597336LOC690352hypothetical protein LOC69035214108281908108285008Rat
1595841LOC364211similar to Alpha-centractin (Centractin) (Centrosome-associated actin homolog) (Actin-RPV) (ARP1)14104320794104322074Rat
1596729Pisdphosphatidylserine decarboxylase148329863083347697Rat
1597113LOC364198similar to Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)149161954691621201Rat
1597114LOC364192similar to ribosomal protein L13A148636246286363073Rat
1597115LOC364191similar to CG18041-PA148590198285903495Rat
1597116LOC364185similar to Proteasome subunit beta type 3 (Proteasome theta chain) (Proteasome chain 13) (Proteasome component C10-II)148243905982440309Rat
1642416Nudcd3NudC domain containing 3148632641386333397Rat
2319725LOC100361648hypothetical LOC10036164814110370447110373259Rat
2319736LOC100361636vasculin-like protein 1-like14107392042107395562Rat
2319299LOC100361879ATP synthase subunit epsilon, mitochondrial-like148322018283220525Rat
2318741LOC100362142mCG20085-like148087740780878112Rat
2318182LOC100362406mCG51413-like148794558387946203Rat
2322065LOC10036049160S ribosomal protein L13-like148675114286751844Rat
2320735Pom121l12POM121 transmembrane nucleoporin-like 12149768608897687756Rat
2321635LOC100364123glyceraldehyde-3-phosphate dehydrogenase-like149809593298096903Rat
2320935LOC100361025protein arginine methyltransferase 1-like149304096793042219Rat
2323208LOC100363335heterogeneous nuclear ribonucleoprotein K-like14100513753100515443Rat
2322694LOC100360155DEAD (Asp-Glu-Ala-Asp) box polypeptide 514109292839109295750Rat
2323351LOC100363290hypothetical protein LOC10036329014100400357100400816Rat
2320503LOC100361260ribosomal protein L31-like14104026170104026565Rat
2323556LOC100363039Rabring 7149789468897902030Rat
2323677LOC100359517ribosomal protein S27-like14104396613104451972Rat
2323894LOC100362885hypothetical LOC100362885149760875797614893Rat
2324806LOC100363083COP9 signalosome subunit 8149943218499432853Rat
6489785LOC100911950uncharacterized LOC10091195014104612764104618551Rat
6488932LOC100912062uncharacterized LOC100912062148060693480625386Rat
6491888LOC100911576heterogeneous nuclear ribonucleoproteins C1/C2-like148854363088574207Rat
6495238LOC100911029nudC domain-containing protein 3-like147881472578828790Rat
6498754LOC100910447uncharacterized LOC10091044714107901503107901845Rat
6502321LOC100909672uncharacterized LOC10090967214105832205105868961Rat
6499571LOC100910250prefoldin subunit 4-like148382001283820567Rat
6496621LOC100910790spondin-2-like148286363982889642Rat
6500534LOC100910076proteasome subunit beta type-3-like148245924682460496Rat
7501081LOC102555492zinc finger protein 120-like149867122998681907Rat
7502448LOC102553689uncharacterized LOC10255368914107841883107866143Rat
7502494LOC102553003uncharacterized LOC102553003149244426892471364Rat
7502675LOC102547434uncharacterized LOC10254743414104571867104581278Rat
7505155LOC102555468uncharacterized LOC102555468148206992582083193Rat
7529820LOC102553858uncharacterized LOC102553858148743058087439871Rat
7508556LOC10255162960S ribosomal protein L21-like14102507778102508314Rat
7496177LOC102556042glyceraldehyde-3-phosphate dehydrogenase-like14109630710109631670Rat
7496825LOC102549464TBC1 domain family member 14-like147917227479208747Rat
7536866LOC102550584hornerin-like14107040773107062758Rat
7516141LOC102552091uncharacterized LOC10255209114107517173107558414Rat
7519564LOC102553859uncharacterized LOC102553859149428007894281245Rat
7503920LOC102550529uncharacterized LOC10255052914106846704106854733Rat
7503967LOC10255600960S ribosomal protein L29-like148327937583282063Rat
7662187LOC102552414uncharacterized LOC10255241414107646014107649828Rat
7662247LOC102552528uncharacterized LOC102552528149130298291313288Rat
7666146LOC10254999260S ribosomal protein L21-like14101129618101130154Rat
7635591Selenok-ps3selenoprotein K, pseudogene 3147918863279190492Rat
7636041LOC102557304uncharacterized LOC102557304148890962488911551Rat
7623242LOC102554296uncharacterized LOC102554296149572479695733731Rat
7574864LOC10255011960S ribosomal protein L18-like148592809185928621Rat
7638953LOC102557119uncharacterized LOC10255711914108925199108929306Rat
7655756LOC102554771guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2-like149598455395985389Rat
7628157LOC102549056uncharacterized LOC10254905614105144405105149614Rat
7642008LOC102556795uncharacterized LOC102556795148411809284130337Rat
7658931LOC102549500uncharacterized LOC10254950014106293161106300080Rat
7589391LOC102550651segmentation polarity homeobox protein engrailed-like148623744086240341Rat
7617960LOC102551278centromere protein O-like148238218282382739Rat
7561491LOC102555192uncharacterized LOC102555192148848875288520863Rat
7581889LOC102549560selenoprotein K-like147937050079372360Rat
7582242LOC102547136uncharacterized LOC10254713614105914825105919660Rat
7604623LOC102552343uncharacterized LOC10255234314107617199107618938Rat
7565325LOC102556834uncharacterized LOC102556834148108506081091585Rat
7606883LOC102547700uncharacterized LOC102547700148680034086803390Rat
7606982LOC102551829uncharacterized LOC10255182914103951453103952762Rat
7567433LOC102548772uncharacterized LOC10254877214105078450105085243Rat
7553797LOC102552529uncharacterized LOC10255252914107690449107693221Rat
7691634LOC102551536uncharacterized LOC10255153614106901114106908631Rat
7704064LOC102549281uncharacterized LOC102549281148433442984346143Rat
7704924LOC102547058uncharacterized LOC10254705814105898992105900404Rat
7725456LOC102556992uncharacterized LOC102556992148275762882761935Rat
7712265LOC102552090glyceraldehyde-3-phosphate dehydrogenase-like148940469589405716Rat
7731769LOC102553529uncharacterized LOC102553529149396829193983265Rat
7737212LOC102557376uncharacterized LOC102557376148543579085440722Rat
7713719LOC102548633zinc finger protein 729-like149875599098759670Rat
7740095LOC10254687060S ribosomal protein L7-like148360831183609181Rat
7743232LOC102552764uncharacterized LOC102552764149213137292150507Rat
7698765LOC102549235uncharacterized LOC10254923514105908521105916081Rat
7671595LOC102553796uncharacterized LOC10255379614107910079107913777Rat
7673923LOC102549967uncharacterized LOC102549967148573145285740233Rat
7675413PolnDNA polymerase nu148183776482037999Rat
7675909LOC102551828uncharacterized LOC102551828148552084185526211Rat
7747850LOC102547925uncharacterized LOC10254792514104709528104715761Rat
7729069LOC102556662uncharacterized LOC102556662149432103094338386Rat
7729728LOC102554025uncharacterized LOC102554025148768759787695441Rat
9097301LOC103693769uncharacterized LOC103693769147901965979025711Rat
9175426LOC103693205uncharacterized LOC10369320514104133427104138280Rat
9071266LOC103693146non-histone chromosomal protein HMG-17 pseudogene148460945584610827Rat
9079304LOC103693230sperm mitochondrial-associated cysteine-rich protein-like14107201105107202847Rat
9103852LOC103693768serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like147884342478902270Rat
9192070LOC103693089uncharacterized LOC103693089148109167581094309Rat
9159199LOC103693787uncharacterized LOC103693787149452858494529398Rat
9196123LOC103690128smoothelin-like148067891980682296Rat
9115893LOC103693175uncharacterized LOC103693175149200525692051990Rat
9197066LOC103690085protein FAM193A-like148189772781909622Rat
9198151LOC103693795splicing regulatory glutamine/lysine-rich protein 1-like14105237049105240280Rat
9167324LOC103693123uncharacterized LOC103693123148368984783705368Rat
9122992LOC1036937802-oxoglutarate dehydrogenase, mitochondrial-like148659990686614963Rat
9204610LOC103693777uncharacterized LOC103693777148637522686377723Rat
9124587LOC103693776zinc finger MIZ domain-containing protein 2148651415786530701Rat
9125643LOC103693767uncharacterized LOC103693767147881807778823280Rat
9085328LOC103693779putative uncharacterized protein148163874181639554Rat
9215803LOC103693789uncharacterized LOC103693789149793149097969409Rat
9220236LOC103693221uncharacterized LOC10369322114105427992105495839Rat
9271216LOC103693791uncharacterized LOC10369379114106542335106548715Rat
9232718LOC103693090uncharacterized LOC103693090148168756481690432Rat
9384156LOC10369377460S ribosomal protein L21 pseudogene148150810281508969Rat
9281506LOC103690742uncharacterized LOC103690742149455368294555627Rat
9322746LOC103693223uncharacterized LOC10369322314110125501110128049Rat
9328351LOC103693793Y-linked testis-specific protein 1-like149650112596501840Rat
9253251LOC103693171uncharacterized LOC103693171148891128088921637Rat
9256478LOC103693200uncharacterized LOC103693200149295156192961624Rat
9300425LOC103693215uncharacterized LOC10369321514106564303106568269Rat
9301616LOC103693204uncharacterized LOC10369320414103329130103337937Rat
9261214LOC103693169uncharacterized LOC103693169148766782187673432Rat
9302610LOC103693214uncharacterized LOC10369321414106243141106248266Rat
9302896LOC103693788uncharacterized LOC103693788149437445394375227Rat
9364262LOC103693170uncharacterized LOC103693170148766770287729472Rat
9366226LOC103693132transcription initiation factor IIA subunit 2 pseudogene148413680384137498Rat
9463298LOC103693135uncharacterized LOC103693135148428781084291444Rat
9426172LOC103693157uncharacterized LOC103693157148677027686774285Rat
9426181LOC103693794ewing's tumor-associated antigen 1 homolog14102296139102301897Rat
9427741LOC103693220uncharacterized LOC10369322014105353480105361911Rat
9391524LOC103693208uncharacterized LOC10369320814104717816104726288Rat
9473174LOC103693792guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 pseudogene149599300395993838Rat
9398765LOC103693148uncharacterized LOC103693148148533871385339417Rat
9478891LOC103693095uncharacterized LOC103693095148209306282093730Rat
9444086LOC103693217uncharacterized LOC10369321714107584376107588076Rat
9406654LOC103693201uncharacterized LOC1036932011499999536100010941Rat
9449916LOC103693778uncharacterized LOC103693778149242983092436451Rat
9410462LOC103693172uncharacterized LOC103693172148890272388907241Rat
9418849LOC103693218uncharacterized LOC10369321814107714186107716910Rat
9420305LOC103693786uncharacterized LOC103693786149453088994532099Rat
9685395Tug1taurine up-regulated 1148387875783885791Rat
11361306LOC108352805uncharacterized LOC10835280514101146220101167224Rat
11368922LOC108352787uncharacterized LOC108352787148601362786025402Rat
11372421LOC108348154ankyrin repeat domain-containing protein 29-like14109518539109564733Rat
11455995LOC10835286140S ribosomal protein S28 pseudogene14104987686104987995Rat
11456686LOC108352803uncharacterized LOC108352803149865976999111047Rat
11446143LOC108352810uncharacterized LOC10835281014105777944105782829Rat
11449110LOC10835277660S ribosomal protein L37 pseudogene147944022379441327Rat
11454114LOC108352782uncharacterized LOC108352782148182294381826648Rat
11465312LOC108352859uncharacterized LOC10835285914102648022102654532Rat
11466963LOC108352806uncharacterized LOC10835280614103436523103454273Rat
11469188LOC108352790ribosome biogenesis protein NSA2 homolog pseudogene148639588986396670Rat
11470775LOC108352793uncharacterized LOC108352793148818316088185859Rat
11474103LOC108352779uncharacterized LOC108352779148082965680900741Rat
11474186LOC108352796uncharacterized LOC108352796148896560388969071Rat
11474795LOC108352792uncharacterized LOC108352792148712490087142218Rat
11357631LOC10835277460S ribosomal protein L35a pseudogene147887988178880244Rat
11457748LOC108352794uncharacterized LOC108352794148822831388235490Rat
11361887LOC108352812uncharacterized LOC10835281214107678025107683707Rat
11364710Trnar-ucu6transfer RNA arginine (anticodon UCU) 6149265592992656015Rat
11437269LOC108352797uncharacterized LOC108352797149038186690437477Rat
11360800LOC108352781U6 snRNA-associated Sm-like protein LSm3 pseudogene148157785781579606Rat
11429603LOC108352811uncharacterized LOC10835281114107013989107022440Rat
11451885LOC108352778uncharacterized LOC108352778148054474580584397Rat
11370487LOC108352815uncharacterized LOC10835281514108284663108292308Rat
11440925LOC108352813heat shock cognate 71 kDa protein pseudogene14107940191107942287Rat
11371864LOC108352788uncharacterized LOC108352788148612599086141479Rat
11372689LOC108352800uncharacterized LOC108352800149304343193057589Rat
11453222LOC108352783uncharacterized LOC108352783148282757782845530Rat
11384054LOC108352835coiled-coil domain-containing protein 58 pseudogene148671145786711835Rat
11384244LOC108352786uncharacterized LOC108352786148428605284287815Rat
11426172LOC10835279860S ribosomal protein L9 pseudogene149124297191243581Rat
11355187LOC108352777uncharacterized LOC108352777148007481480078424Rat
11397988LOC108352836formin-like protein 714105055437105058477Rat
11386290LOC108352801uncharacterized LOC108352801149411970694151360Rat
11398879LOC108352791uncharacterized protein C11orf98 homolog pseudogene148682957886830850Rat
11410540LOC108352802uncharacterized LOC108352802149432460994341433Rat
11389675LOC108352855uncharacterized LOC108352855148571801185719678Rat
11400929LOC10835280940S ribosomal protein S12 pseudogene14105066994105078033Rat
11411395LOC108352857uncharacterized LOC108352857148702711687029465Rat
11401183LOC108352816uncharacterized LOC10835281614109877710110103166Rat
11401571LOC10835286360S ribosomal protein L17 pseudogene14108620638108621358Rat
11402135LOC108352862uncharacterized LOC10835286214105338625105353246Rat
11402271LOC10835285860S ribosomal protein L35a pseudogene148936766089368069Rat
11379724LOC108352804uncharacterized LOC108352804149990407499906686Rat
11404770LOC108352856U1 small nuclear ribonucleoprotein C-like148672142086722455Rat
11393903LOC108352785uncharacterized LOC108352785148402254284055194Rat
11394210LOC108352808uncharacterized LOC10835280814104620946104624854Rat
11500591LOC108352814uncharacterized protein C19orf43 homolog pseudogene14108069572108070287Rat
11520377LOC108352789uncharacterized LOC108352789148621228186218540Rat
11478544LOC108352784uncharacterized LOC108352784148382653083832165Rat
11503487LOC10835278040S ribosomal protein S17 pseudogene148104338181043889Rat
11479759LOC108352860uncharacterized LOC10835286014102907501102917601Rat
11509257LOC108352807uncharacterized LOC10835280714104612769104618366Rat
11509398LOC108352821ribosome biogenesis protein NSA2 homolog pseudogene14107062307107065043Rat
11510814LOC10835277360S ribosomal protein L35a pseudogene147874110778741470Rat
11512918LOC108352799uncharacterized LOC108352799149241475792416527Rat
11485372LOC108352775uncharacterized LOC108352775147891598978918886Rat
11486863LOC108352795uncharacterized LOC108352795148837164988464673Rat
11489712LOC108352834acidic proline-rich protein PRP25-like148106908481069557Rat
11493961LOC108348221ewing's tumor-associated antigen 1 homolog pseudogene14102293823102295689Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10102D14Mco2285148072805980728948Ratregion
10102D14Mco2285148072805980728347Ratregion
10773D14Mit10260148745877287459035Ratregion
11086D14Mgh1119148604804386048147Ratregion
33965D14Mit15193148911707289117264Ratregion
34616D14Mit16133148619179486191930Ratregion
36299D14Rat20155148660137086601524Ratregion
36299D14Rat20155148646830986468463Ratregion
36307D14Rat21141149995036199950491Ratregion
37306DXRat4626914107587125107587392Ratregion
37660D14Rat4915314100499335100499497Ratregion
37788D14Rat37226148106603881066277Ratregion
36512D14Rat18155148530766385307815Ratregion
34839D14Rat3212614108833671108833798Ratregion
34931D14Rat19160148604753086047691Ratregion
35837D14Rat27158148084136180841518Ratregion
35897D14Rat2217814106641587106641756Ratregion
38016D14Rat51193148896342788963621Ratregion
38070D14Rat43215147844630378446524Ratregion
38212D14Rat57218148429167184291880Ratregion
38214D14Rat59207148028690280287104Ratregion
40396D14Rat108158148596409285964243Ratregion
40406D14Rat10913614103885359103885494Ratregion
40134D14Rat91160148348082583480986Ratregion
40140D14Rat9517314105074174105074364Ratregion
40342D14Rat92156148449309784493260Ratregion
38806D14Rat67145148897404488974185Ratregion
39030D14Rat3820014102549183102549388Ratregion
39310D14Rat34228149907447999074709Ratregion
42977D13Rat19516514107563288107563454Ratregion
43026D14Rat127218147959610579596334Ratregion
43027D14Rat144131148302535083025485Ratregion
43032D14Rat13213414110402448110402569Ratregion
42393D14Rat136237148687743586877662Ratregion
42394D14Rat137219148989298489893201Ratregion
42395D14Rat13813014104718544104718673Ratregion
42396D14Rat13921314103504569103504779Ratregion
40864D14Rat93223148623135786231574Ratregion
41138D14Rat94235148887072488870994Ratregion
45190D14Got66177149277905092779226Ratregion
45191D14Got63193149381277093812962Ratregion
45191D14Got63193149381238693812962Ratregion
45192D14Got67171149361526593615435Ratregion
45194D14Got6594149259946592599558Ratregion
45196D14Got70155148511906885119224Ratregion
45197D14Got71299148549617885496475Ratregion
45205D14Got87158148887692488877081Ratregion
45206D14Got62200149187546591875661Ratregion
45207D14Got64159149150298391503141Ratregion
45211D14Got7212914107884959107885087Ratregion
45212D14Got7428814107428559107428846Ratregion
45213D14Got7321814107227294107227509Ratregion
45214D14Got7522314107758662107758884Ratregion
45215D14Got7827914109291929109292206Ratregion
60073D14Got61100148088232680882425Ratregion
60075D14Got7714814108701787108701934Ratregion
60076D14Got7924914100844551100844799Ratregion
60076D14Got7924914100710478100710726Ratregion
60077D14Got8113614103817262103817395Ratregion
60078D14Got83217149941361399413826Ratregion
60079D14Got8418914101052073101052261Ratregion
60080D14Got8514014102953505102953642Ratregion
60082D14Got8814614102968891102969036Ratregion
625817D14Got8229514103113172103113466Ratregion
62442D14Uia3195149178569391785887Ratregion
62469D1Uia1150148399959383999743Ratregion
66458D14Mco11270148428375484284024Ratregion
66465D14Mco15229148745878787459035Ratregion
629608D14Got69152148511554285115693Ratregion
66567D14Mco430014108512381108512658Ratregion
66571D14Mco523314103778284103778534Ratregion
67232D14Arb19215148936797389368187Ratregion
67234D14Arb21148745881987459012Ratregion
1630365D14Got13125514102639850102640104Ratregion
1630949D14Wox28115148619181386191927Ratregion
1632095D14Got123293149896029598960587Ratregion
1579134D18Chm3213414109526205109526338Ratregion
1628890D13Got144160148530770985307868Ratregion
1628905D14Got135197149338673993386937Ratregion
1629395D14Got140199147985127079851468Ratregion
1638917D14Got165300149403611594036414Ratregion
1641382D14Got16812114103088518103088638Ratregion
1633040D14Got126125149036097790361089Ratregion
1640481D14Got167200149402986194030060Ratregion
1635036D14Got12418014102656094102656272Ratregion
1637780D14Wox29215148575444585754659Ratregion
1634127D14Wox16184148073693280737115Ratregion
7206046Xbp190148575716585757254Ratregion
7193006Otx18714106863794106863880Ratregion
7206268Fgfr3130148227547182275681Ratregion
5035731RH1268311114104889221104889331Ratregion
5038632C86258209147943811379438321Ratregion
7206628Slc1a499914104582191104583189Ratregion
5036338Hdh141148125441781254557Ratregion
5039280RH127615196148387891883879113Ratregion
5036414Mor24714106380703106381172Ratregion
5036545Ywhah159148305395083054108Ratregion
5039022RH127468194148518161685181809Ratregion
5036571AU048469279148845754188457807Ratregion
5036645AU048701241148294190682942146Ratregion
5036691AU048890299147897025778970555Ratregion
5036713AU04896217314109004957109005129Ratregion
5036879AU04949526014105883147105883406Ratregion
5036953AU04973513214103882881103883014Ratregion
5036965AU04977517914107969248107969426Ratregion
5036993AU04985217914100215094100215273Ratregion
5037067WI-1317611214104501434104501545Ratregion
5031340PMC145549P1196148629757186297766Ratregion
5025954RH130337181149234300292343182Ratregion
5025972RH130406186148611112086111305Ratregion
5026080RH130833210149190922891909437Ratregion
502861333.MMHAP29FRC12.seq191148256084782561037Ratregion
5028703SHGC-59523113147932571479325826Ratregion
5031456AU04826316714100130598100130764Ratregion
5026194RH131279182148093357280933753Ratregion
5026204RH131314217148666181186662027Ratregion
5026204RH131314217148653009386530309Ratregion
5028889RH14271011814105026860105026976Ratregion
5031594AU047808209148336316683363374Ratregion
5034307UniSTS:22608413814106061135106061272Ratregion
5026398RH132053185148226965582269839Ratregion
5029013RH143186231148731945787319687Ratregion
5026482RH132382191148441140984411599Ratregion
5029095RH143504132148551953985519670Ratregion
5029217RH143960102148496868284968783Ratregion
5034512BI280365192148322033983220519Ratregion
5026876RH133865192147932563779325827Ratregion
5032209AI481085120147866565778665776Ratregion
5032223AF07684594148919772189197814Ratregion
5032301AI84338996148950373189503826Ratregion
5035100D12S364437148233665082337086Ratregion
5035138AW53263018214106711951106712132Ratregion
5035168AW53299719514107797918107798112Ratregion
5029693AA859841199148673841586738613Ratregion
5029695BF419924204148674788986748092Ratregion
5029709BE096205155148353330983533463Ratregion
5032393AI852688151148531297485313124Ratregion
5032493D5Ertd110e241147943846179438701Ratregion
5035340BE10703618514108264657108264841Ratregion
5029759BF39366820114107869962107870162Ratregion
5029773BE10252022014105658127105658346Ratregion
5032571WI-20033278148552313285523409Ratregion
5027291AI504350100148282415582824254Ratregion
5027415AW20875489148417431784174405Ratregion
5027417AW122071156148535745085357605Ratregion
5029977BI285876220149304098393041202Ratregion
5030003BF38854722114103328478103328698Ratregion
5030203BF401732135148416016184160295Ratregion
5032881RH136830130147881436878814497Ratregion
5032889RH136858215148027624280276456Ratregion
5024998M81342139148227241582272553Ratregion
5025082RH127162249148357393383574181Ratregion
5027657Gprk2l403148130694181307343Ratregion
5030247BE099486155148418467184184825Ratregion
5033099RH137594196149181459091814785Ratregion
5025276RH127695181148136756181367741Ratregion
5027797RH94778199148614930286149500Ratregion
502790929.MMHAP62FLB5.seq16714110265579110265745Ratregion
5033241RH138107143149918964399189785Ratregion
5028097X7898716114100098558100098718Ratregion
5028330SGC32761126148673690186737026Ratregion
5025830RH12985320014107187654107187853Ratregion
5025932RH130248180148575855285758731Ratregion
5028517Y07919104148528098985281092Ratregion
5028519AI45099121114108264358108264568Ratregion
5028535AI448222242148238168382381924Ratregion
5031115BE109850158148267225082672407Ratregion
5052113RH94847150148501280585012957Ratregion
5053683RH142790101148357137183571471Ratregion
5054007RH14297614414108485965108486108Ratregion
5054029RH142989190149190389291904081Ratregion
5056695RH144526212147971186779712078Ratregion
5056945RH14467117714104345231104345407Ratregion
5051869RH9470510014106861596106861695Ratregion
5052023RH94795302148744923387449510Ratregion
5054281RH143134170149190599991906168Ratregion
5054353RH14317514214100363764100363905Ratregion
5057412AA997364200148136078681361229Ratregion
5057510AA819574152148110521981105370Ratregion
5052111RH94846150148501281585012967Ratregion
5055255RH143696142148620641386206554Ratregion
5055279RH143710207148211759382117799Ratregion
5059390AW53055315414108927191108927344Ratregion
5055479RH143825188148316153283161719Ratregion
5055687RH143944202148183156881831769Ratregion
5054771RH14341629714107594553107594849Ratregion
5058550BE10201517014104669420104669589Ratregion
5058570BI290800178148211956582119742Ratregion
5058674BI284455168148673736086737526Ratregion
5055937RH144089299148496832184968619Ratregion
5055121RH143618182148352858083528761Ratregion
5059594BE097386168148177428181774448Ratregion
5056143RH144208264149252105092521313Ratregion
5056641RH144495207147890612478906330Ratregion
5056735RH144549240148228827282288511Ratregion
5056961RH14468019314108478529108478721Ratregion
5052239D19343158148444522684445383Ratregion
5052301N28202186148496826784968452Ratregion
5052373X9559118414100425354100425537Ratregion
5058908BF387217171148643523186435401Ratregion
5059034BF387395198148433957784339774Ratregion
5059734AI5568039414100151627100151720Ratregion
5059786BE097865172149234197992342150Ratregion
5059820BE097977160148677327986773438Ratregion
5055803RH144011113148424705784247169Ratregion
5053089RH142447165148034216780342331Ratregion
5059904BF388196120148551941485519533Ratregion
5058262BI27788097148165994681660042Ratregion
5058386BG376858113148414218984142301Ratregion
5058404AI058790109148357394883574056Ratregion
5058526BF393136117148595116385951279Ratregion
5059110BI27841416014105551096105551255Ratregion
5053571RH142726105148441192684412030Ratregion
5059344AI059001182148183045481830635Ratregion
5057768BF38615916214104503265104503426Ratregion
5057804BI277150154148493550584935658Ratregion
5057812BI277160176148493554584935720Ratregion
5057816BI27719215214100391678100392391Ratregion
5053717RH142810299149215191292152210Ratregion
5053869RH14289721314107798184107798387Ratregion
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5088003Meis115414103182513103182666Ratregion
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5085100Igfbp3182148745777387457954Ratregion
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5090049AU049520262148048351380483769Ratregion
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5082493BE119538181148908917689089356Ratregion
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5082615BE119858193147992586779926059Ratregion
5084554AI409861154148639048986390636Ratregion
5082769BF390060158148212678082126937Ratregion
5086113BM383920196148674353086743725Ratregion
5086236AW529690162148445718884457350Ratregion
5086242BM386234189148638109086381278Ratregion
5086307AW529769179148326080483260982Ratregion
5083105BI281742204148092298580923188Ratregion
5083275BI2759139314104513130104513222Ratregion
5083355AA8184379014104341033104341122Ratregion
5086496AA800135175148026950780269681Ratregion
5086562AA891734191148867437788674567Ratregion
5085155AW532553152148280006982800220Ratregion
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5081701BF408245147149190718191907326Ratregion
5081803BE11833918514107776910107777094Ratregion
5085920AA99666911114100098929100099039Ratregion
5083889AA893195121148927295289273072Ratregion
5502947Xpo1014108048846108050004Ratregion
5502947Xpo1014108048846108049646Ratregion
5503021Gal3st10148424504984246215Ratregion
5503798UniSTS:47118455414107021914107022467Ratregion
5503688MEIS1_782574714103182017103182763Ratregion
5503803UniSTS:471314379148746001387461638Ratregion
5503890SRCR23H933149747517997476114Ratregion
5504117Bcl11a38014108912079108912458Ratregion
5504276D2S1567E8914106379241106379941Ratregion
5504548PMC303337P222414107750858107751081Ratregion
5504664PMC343796P113314103319023103319155Ratregion
5504805Hrmt1l2212149304195193042162Ratregion
5504967Igfbp1259148744911887450677Ratregion
5505446Zmiz2257148665610486656360Ratregion
5505446Zmiz2257148652438686524642Ratregion
5505845UniSTS:49593615414107594337107594490Ratregion
5505484REN75940251148305417183054421Ratregion
5506027Ptdss2134148334486683345206Ratregion
5506384UniSTS:4791091529148532248085324008Ratregion
5506340UniSTS:478869148147968870479688851Ratregion
5506342UniSTS:478870143147967007279670214Ratregion
5506457RH17231109148531334785313455Ratregion
5506290AFM324xh5861149233790692338766Ratregion
5506819G46230234148899572288995955Ratregion
5506813G45955130148383213183832260Ratregion
5507267fb79b101407148837164088373046Ratregion
5507295fb82h10.x1916149572966795730791Ratregion
5507113UniSTS:224593179148218729482187472Ratregion
5507193UniSTS:22517934114107519446107519786Ratregion
5507321G48108118147929431879294432Ratregion
5500288D21S19520147929779379298981Ratregion
5500398GDB:43718943014108306182108306611Ratregion
5500067UniSTS:236520158149189734091897497Ratregion
5499875UniSTS:23516384148266448682664569Ratregion
5499877UniSTS:235167121148022906180229181Ratregion
5499879UniSTS:235168268147945632379456590Ratregion
5500061UniSTS:236495193148388390783884099Ratregion
5502994D5Jcs82143148144751181447653Ratregion
5500382GDB:373416118148502441785024534Ratregion
5500491RH126561213148165841881658630Ratregion
5500593RH13610520114107728642107728842Ratregion
5500685STS-Z408571551148667883786680387Ratregion
5501281D12S13291550148092066180921486Ratregion
5501289G06555325148532214685322470Ratregion
5502098MARC_4333-4334:996679561:1663148678985186790513Ratregion
5502098MARC_4333-4334:996679561:1663148658596386586625Ratregion
5502100MARC_4335-4336:996679558:1280148661248086613065Ratregion
5502100MARC_4335-4336:996679558:1280148647942086480005Ratregion
5505277BG0743891424148743501087436433Ratregion
5505558AL02098017014108287441108287610Ratregion
5501888MARC_16871-16872:1015445619:10148096797980968607Ratregion
5502309RH124401150148246158882461737Ratregion
5502770PELI116514106062308106062472Ratregion
5502477RH125040122148742907787429198Ratregion
5502581RH125436150148342495483425103Ratregion
Position Markers

Flank 1: (D14Rat43)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01478,446,303 - 78,446,524NCBI
Rnor_5.01478,419,915 - 78,420,136UniSTS
RGSC_v3.41479,256,324 - 79,256,540RGD
RGSC_v3.41479,256,325 - 79,256,540UniSTS
RGSC_v3.11479,258,715 - 79,258,931RGD
Celera1472,640,828 - 72,641,041UniSTS
Cytogenetic Map14q21UniSTS
SHRSP x BN Map1440.7299RGD
SHRSP x BN Map1440.7299UniSTS
FHH x ACI Map1456.8699RGD
Flank 2: (D14Rat132)
Rat AssemblyChrPosition (strand)Source
Rnor_6.014110,402,448 - 110,402,569NCBI
Rnor_5.014110,102,863 - 110,102,984UniSTS
RGSC_v3.414107,101,606 - 107,101,727UniSTS
RGSC_v3.414107,101,605 - 107,101,727RGD
RGSC_v3.114107,120,816 - 107,120,938RGD
Celera1499,084,151 - 99,084,273UniSTS
SHRSP x BN Map1471.2399UniSTS
SHRSP x BN Map1471.2399RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1412680424106641756Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143259392686191589Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)144031561085315610Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)144031561085315610Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)144031561085315610Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)144031561085315610Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)144163756980841518Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1442442731108833671Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1443910761105074364Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1451818462105074364Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1460980905105980905Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1460980905105980905Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)146187332388870994Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1461993178106993178Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1463548095108548095Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)147339146788870994Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1478172765102549388Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)1478172765102549388Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1478172765102549388Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1478172765102549388Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1478172765106641756Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1478446303110402569Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1480049285115493446Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1480049285115493446Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)1485307663106641756Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)1487458772106641756Rat
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)14102549183106641756Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_gene RT-PCR revealed 33 candidate genes, 27 were confirmed by mRNA expression in the liver 2300117
qtl_general inducing agent: 1% cholesterol containing diet 2300117
qtl_general software used: two-sided Student's t-test or one-way ANOVA 2300117
qtl_general measurement method: rats were fed a diet containing 1% cholesterol, 10% olive oil for 2 weeks, then blood samples collected 2300117