Maea (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 14 | 81,581,784 - 81,615,246 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 77,357,261 - 77,390,683 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 77,357,264 - 77,390,671 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 81,808,960 - 81,842,384 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 83,049,511 - 83,082,935 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 79,494,839 - 79,528,263 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 82,664,248 - 82,697,673 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 82,664,249 - 82,697,673 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 83,349,564 - 83,383,727 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 83,124,774 - 83,158,198 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 83,127,164 - 83,160,588 (+) | NCBI | | | | | Celera | 14 | 76,276,552 - 76,309,970 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q21 | NCBI | | | | |
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MAEA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 1,289,891 - 1,340,137 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 1,289,887 - 1,340,147 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 1,283,679 - 1,333,925 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 1,273,672 - 1,323,925 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 1,273,542 - 1,323,721 | NCBI | | | | | Celera | 4 | 1,215,633 - 1,265,565 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | p16.3 | NCBI | | | | | HuRef | 4 | 1,250,956 - 1,301,457 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 1,282,541 - 1,333,721 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 1,288,439 - 1,338,753 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Maea (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 33,492,916 - 33,530,638 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 33,492,853 - 33,530,640 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 33,335,572 - 33,373,294 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 33,335,509 - 33,373,296 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 33,678,221 - 33,715,943 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 33,652,467 - 33,689,370 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 30,814,826 - 30,852,569 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | B1 | NCBI | | | | | cM Map | 5 | 17.55 | NCBI | | | | |
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Maea (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955514 | 689,868 - 722,779 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955514 | 689,867 - 722,779 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MAEA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 1,621,007 - 1,673,967 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 1,586,767 - 1,640,160 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 1,432,848 - 1,485,764 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 1,335,508 - 1,366,448 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 1,315,810 - 1,366,448 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MAEA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 3 | 62,679,084 - 62,718,154 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 62,682,538 - 62,718,071 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 65,198,239 - 65,234,415 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 63,157,007 - 63,193,190 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 3 | 62,648,983 - 62,685,136 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 62,852,407 - 62,888,598 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 63,211,815 - 63,248,001 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Maea (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 68,257,773 - 68,294,743 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936477 | 21,959,465 - 21,996,937 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936477 | 21,959,465 - 21,996,395 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MAEA (Sus scrofa - pig) |
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MAEA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 47,425,276 - 47,473,618 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 47,425,185 - 47,473,626 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666051 | 3,765,578 - 3,816,123 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Maea (Heterocephalus glaber - naked mole-rat) |
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