Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Aebp1 | Rat | Ehlers-Danlos syndrome classic-like 2 | | ISO | AEBP1 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Aebp1 | Rat | Ehlers-Danlos syndrome classic-like 2 | | ISO | AEBP1 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
4. | GOA pipeline | RGD automated data pipeline |
5. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:7477299 | PMID:12477932 | PMID:15654748 | PMID:19199708 | PMID:20551380 | PMID:24006456 | PMID:27068509 | PMID:29606302 |
Aebp1 (Rattus norvegicus - Norway rat) |
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AEBP1 (Homo sapiens - human) |
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Aebp1 (Mus musculus - house mouse) |
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Aebp1 (Chinchilla lanigera - long-tailed chinchilla) |
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AEBP1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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AEBP1 (Canis lupus familiaris - dog) |
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Aebp1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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AEBP1 (Sus scrofa - pig) |
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AEBP1 (Chlorocebus sabaeus - green monkey) |
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Aebp1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Aebp1
10 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH130406 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001100970 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006251316 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | BC133065 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
CH473963 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000014 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000018846 ⟹ ENSRNOP00000018846 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001100970 ⟹ NP_001094440 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006251316 ⟹ XP_006251378 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063273226 ⟹ XP_063129296 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001094440 | (Get FASTA) | NCBI Sequence Viewer |
XP_006251378 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129296 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | A2RUV9 | (Get FASTA) | NCBI Sequence Viewer |
AAI33066 | (Get FASTA) | NCBI Sequence Viewer | |
EDM00315 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000018846 | ||
ENSRNOP00000018846.7 | |||
ENSRNOP00055042226 | |||
ENSRNOP00060045599 | |||
ENSRNOP00065027494 |
RefSeq Acc Id: | NP_001094440 ⟸ NM_001100970 |
- Peptide Label: | precursor |
- UniProtKB: | A2RUV9 (UniProtKB/Swiss-Prot), A6IKQ1 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006251378 ⟸ XM_006251316 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A0H2UHL3 (UniProtKB/TrEMBL), A6IKQ1 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000018846 ⟸ ENSRNOT00000018846 |
RefSeq Acc Id: | XP_063129296 ⟸ XM_063273226 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A2RUV9 (UniProtKB/Swiss-Prot), A6IKQ1 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A2RUV9-F1-model_v2 | AlphaFold | A2RUV9 | 1-1128 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13699464 | ||||||||
Promoter ID: | EPDNEW_R9988 | ||||||||
Type: | initiation region | ||||||||
Name: | Aebp1_1 | ||||||||
Description: | AE binding protein 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1306922 | AgrOrtholog |
BioCyc Gene | G2FUF-15118 | BioCyc |
Ensembl Genes | ENSRNOG00000013720 | Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ENSRNOG00055029591 | UniProtKB/Swiss-Prot | |
ENSRNOG00060031827 | UniProtKB/Swiss-Prot | |
ENSRNOG00065020330 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000018846 | UniProtKB/TrEMBL |
ENSRNOT00000018846.7 | UniProtKB/Swiss-Prot | |
ENSRNOT00055051257 | UniProtKB/Swiss-Prot | |
ENSRNOT00060055154 | UniProtKB/Swiss-Prot | |
ENSRNOT00065034335 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | Carboxypeptidase-like, regulatory domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Galactose-binding domain-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Zn peptidases | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7124847 | IMAGE-MGC_LOAD |
InterPro | CarboxyPept-like_regulatory | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
FA58C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Galactose-bd-like_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Peptidase_M14 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Peptidase_M14_domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:305494 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:156778 | IMAGE-MGC_LOAD |
NCBI Gene | 305494 | ENTREZGENE |
PANTHER | ADIPOCYTE ENHANCER-BINDING PROTEIN 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROTEASE M14 CARBOXYPEPTIDASE | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | CarboxypepD_reg | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
F5_F8_type_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Peptidase_M14 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Aebp1 | PhenoGen |
PRINTS | CRBOXYPTASEA | UniProtKB/TrEMBL |
PRICHEXTENSN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PROSITE | CARBOXYPEPT_ZN_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
FA58C_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
FA58C_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
FA58C_3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PEPTIDASE_M14 | UniProtKB/Swiss-Prot | |
RatGTEx | ENSRNOG00000013720 | RatGTEx |
ENSRNOG00055029591 | RatGTEx | |
ENSRNOG00060031827 | RatGTEx | |
ENSRNOG00065020330 | RatGTEx | |
SMART | FA58C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Zn_pept | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF49464 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF49785 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Zn-dependent exopeptidases | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A0H2UHL3 | ENTREZGENE, UniProtKB/TrEMBL |
A2RUV9 | ENTREZGENE | |
A6IKQ1 | ENTREZGENE, UniProtKB/TrEMBL | |
AEBP1_RAT | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2008-04-30 | Aebp1 | AE binding protein 1 | Aebp1_predicted | AE binding protein 1 (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Aebp1_predicted | AE binding protein 1 (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |