Slc2a9 (solute carrier family 2 member 9) - Rat Genome Database

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Gene: Slc2a9 (solute carrier family 2 member 9) Rattus norvegicus
Analyze
Symbol: Slc2a9
Name: solute carrier family 2 member 9
RGD ID: 1597012
Description: Predicted to enable D-glucose transmembrane transporter activity; fructose transmembrane transporter activity; and urate transmembrane transporter activity. Predicted to be involved in several processes, including dehydroascorbic acid transport; hexose transmembrane transport; and urate transport. Predicted to act upstream of or within D-glucose transmembrane transport. Predicted to be located in apical plasma membrane and basolateral plasma membrane. Predicted to be active in plasma membrane. Orthologous to human SLC2A9 (solute carrier family 2 member 9); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,2',5,5'-tetrachlorobiphenyl.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC501925; similar to solute carrier family 2, member 9 isoform a; solute carrier family 2 (facilitated glucose transporter), member 9; solute carrier family 2, facilitated glucose transporter member 9
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81476,540,649 - 76,674,277 (+)NCBIGRCr8
mRatBN7.21472,328,334 - 72,461,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1472,328,320 - 72,461,981 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1476,790,316 - 76,903,628 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01478,031,186 - 78,144,522 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01474,471,251 - 74,584,577 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01477,067,537 - 77,192,702 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1477,067,503 - 77,192,702 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01477,050,030 - 77,174,290 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41477,624,411 - 77,740,695 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1471,300,173 - 71,413,222 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
7,9-dihydro-1H-purine-2,6,8(3H)-trione  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aldehydo-D-glucose  (ISO)
allopurinol  (EXP)
alpha-Zearalanol  (EXP)
angelicin  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cisplatin  (EXP)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
D-glucose  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
eupatilin  (EXP)
fructose  (EXP,ISO)
fulvestrant  (ISO)
gentamycin  (EXP)
glucose  (ISO)
glyphosate  (EXP)
hydralazine  (ISO)
hypoxanthine  (EXP,ISO)
imperatorin  (ISO)
isoimperatorin  (ISO)
losartan  (ISO)
methoxsalen  (ISO)
methoxychlor  (EXP)
O-methyleugenol  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phloretin  (ISO)
Potassium 2,6-dihydroxytriazinecarboxylate  (EXP,ISO)
potassium chloride  (ISO)
probenecid  (ISO)
psoralen  (ISO)
quercetin  (EXP,ISO)
resveratrol  (ISO)
rotenone  (EXP)
rutin  (EXP)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trans-piceid  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14657010   PMID:15632090   PMID:18327257   PMID:18834626   PMID:19503597   PMID:19587147   PMID:20053405   PMID:25100214   PMID:28083649   PMID:33132325  


Genomics

Comparative Map Data
Slc2a9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81476,540,649 - 76,674,277 (+)NCBIGRCr8
mRatBN7.21472,328,334 - 72,461,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1472,328,320 - 72,461,981 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1476,790,316 - 76,903,628 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01478,031,186 - 78,144,522 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01474,471,251 - 74,584,577 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01477,067,537 - 77,192,702 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1477,067,503 - 77,192,702 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01477,050,030 - 77,174,290 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41477,624,411 - 77,740,695 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1471,300,173 - 71,413,222 (+)NCBICelera
Cytogenetic Map14q21NCBI
SLC2A9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3849,771,025 - 10,040,270 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl49,771,153 - 10,054,936 (-)EnsemblGRCh38hg38GRCh38
GRCh3749,827,848 - 10,041,894 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3649,436,946 - 9,650,970 (-)NCBINCBI36Build 36hg18NCBI36
Build 3449,504,117 - 9,699,383NCBI
Celera410,310,714 - 10,524,222 (-)NCBICelera
Cytogenetic Map4p16.1NCBI
HuRef49,162,269 - 9,375,568 (-)NCBIHuRef
CHM1_149,825,801 - 10,040,024 (-)NCBICHM1_1
T2T-CHM13v2.049,770,809 - 10,039,839 (-)NCBIT2T-CHM13v2.0
Slc2a9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39538,506,616 - 38,660,488 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl538,506,616 - 38,660,486 (-)EnsemblGRCm39 Ensembl
GRCm38538,349,272 - 38,503,147 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl538,349,273 - 38,503,143 (-)EnsemblGRCm38mm10GRCm38
MGSCv37538,740,512 - 38,893,391 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36538,637,555 - 38,790,401 (-)NCBIMGSCv36mm8
Celera535,802,909 - 35,950,476 (-)NCBICelera
Cytogenetic Map5B3NCBI
cM Map520.43NCBI
Slc2a9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555145,479,585 - 5,625,223 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555145,479,585 - 5,625,328 (-)NCBIChiLan1.0ChiLan1.0
SLC2A9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2310,023,459 - 10,270,679 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1410,232,093 - 10,479,383 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v044,232,737 - 4,442,387 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.149,606,182 - 9,771,104 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl49,553,491 - 9,746,981 (-)Ensemblpanpan1.1panPan2
SLC2A9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1369,394,304 - 69,588,462 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl369,394,152 - 69,595,802 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,951,679 - 72,140,512 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0370,150,039 - 70,345,339 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl370,149,887 - 70,345,335 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1369,429,052 - 69,619,481 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0369,593,868 - 69,784,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0369,977,002 - 70,166,047 (+)NCBIUU_Cfam_GSD_1.0
Slc2a9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528562,998,205 - 63,134,783 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647716,717,002 - 16,834,663 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647716,700,915 - 16,836,424 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC2A9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl86,210,478 - 6,367,496 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.186,211,143 - 6,367,530 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC2A9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12740,030,051 - 40,224,069 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604786,830,901 - 86,970,736 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc2a9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475521,171,274 - 21,322,543 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475521,165,374 - 21,328,843 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc2a9
822 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:218
Count of miRNA genes:145
Interacting mature miRNAs:178
Transcripts:ENSRNOT00000042200
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000042200   ⟹   ENSRNOP00000045713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1472,348,468 - 72,461,981 (+)Ensembl
Rnor_6.0 Ensembl1477,079,402 - 77,192,702 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085275   ⟹   ENSRNOP00000069713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1472,350,847 - 72,461,981 (+)Ensembl
Rnor_6.0 Ensembl1477,067,503 - 77,192,701 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094357   ⟹   ENSRNOP00000091073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1472,328,320 - 72,461,981 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099469   ⟹   ENSRNOP00000083445
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1472,348,468 - 72,461,981 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110037   ⟹   ENSRNOP00000097928
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1472,328,320 - 72,461,981 (+)Ensembl
RefSeq Acc Id: NM_001191551   ⟹   NP_001178480
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,560,955 - 76,674,277 (+)NCBI
mRatBN7.21472,348,646 - 72,461,981 (+)NCBI
Rnor_6.01477,079,402 - 77,192,702 (+)NCBI
Rnor_5.01477,050,030 - 77,174,290 (+)NCBI
Celera1471,300,173 - 71,413,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006251100   ⟹   XP_006251162
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,549,114 - 76,673,926 (+)NCBI
mRatBN7.21472,336,792 - 72,461,981 (+)NCBI
Rnor_6.01477,067,537 - 77,192,351 (+)NCBI
Rnor_5.01477,050,030 - 77,174,290 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006251101   ⟹   XP_006251163
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,549,239 - 76,673,926 (+)NCBI
mRatBN7.21472,336,889 - 72,461,981 (+)NCBI
Rnor_6.01477,067,650 - 77,192,351 (+)NCBI
Rnor_5.01477,050,030 - 77,174,290 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006251102   ⟹   XP_006251164
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,560,818 - 76,673,926 (+)NCBI
mRatBN7.21472,348,504 - 72,461,981 (+)NCBI
Rnor_6.01477,079,229 - 77,192,351 (+)NCBI
Rnor_5.01477,050,030 - 77,174,290 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039092336   ⟹   XP_038948264
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,540,651 - 76,673,926 (+)NCBI
mRatBN7.21472,328,334 - 72,461,981 (+)NCBI
RefSeq Acc Id: XM_063273504   ⟹   XP_063129574
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,540,649 - 76,673,926 (+)NCBI
RefSeq Acc Id: XM_063273505   ⟹   XP_063129575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81476,560,818 - 76,673,926 (+)NCBI
RefSeq Acc Id: NP_001178480   ⟸   NM_001191551
- UniProtKB: D4A237 (UniProtKB/TrEMBL),   A6IJT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251162   ⟸   XM_006251100
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JW25 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251163   ⟸   XM_006251101
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JW25 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251164   ⟸   XM_006251102
- Peptide Label: isoform X3
- UniProtKB: A0A8I6G921 (UniProtKB/TrEMBL),   A6IJT3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069713   ⟸   ENSRNOT00000085275
Ensembl Acc Id: ENSRNOP00000045713   ⟸   ENSRNOT00000042200
RefSeq Acc Id: XP_038948264   ⟸   XM_039092336
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AVN8 (UniProtKB/TrEMBL),   A0A0G2JW25 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000083445   ⟸   ENSRNOT00000099469
Ensembl Acc Id: ENSRNOP00000091073   ⟸   ENSRNOT00000094357
Ensembl Acc Id: ENSRNOP00000097928   ⟸   ENSRNOT00000110037
RefSeq Acc Id: XP_063129574   ⟸   XM_063273504
- Peptide Label: isoform X4
- UniProtKB: A0A0G2JW25 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129575   ⟸   XM_063273505
- Peptide Label: isoform X5
- UniProtKB: A6IJT3 (UniProtKB/TrEMBL)
Protein Domains
Major facilitator superfamily (MFS) profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A237-F1-model_v2 AlphaFold D4A237 1-545 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699364
Promoter ID:EPDNEW_R9889
Type:multiple initiation site
Name:Slc2a9_1
Description:solute carrier family 2 member 9
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9890  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01477,067,606 - 77,067,666EPDNEW
RGD ID:13699365
Promoter ID:EPDNEW_R9890
Type:multiple initiation site
Name:Slc2a9_2
Description:solute carrier family 2 member 9
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9889  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01477,079,331 - 77,079,391EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1597012 AgrOrtholog
BioCyc Gene G2FUF-15388 BioCyc
Ensembl Genes ENSRNOG00000005302 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042200 ENTREZGENE
  ENSRNOT00000042200.3 UniProtKB/TrEMBL
  ENSRNOT00000085275.2 UniProtKB/TrEMBL
  ENSRNOT00000094357.1 UniProtKB/TrEMBL
  ENSRNOT00000099469 ENTREZGENE
  ENSRNOT00000099469.1 UniProtKB/TrEMBL
  ENSRNOT00000110037 ENTREZGENE
  ENSRNOT00000110037.1 UniProtKB/TrEMBL
  ENSRNOT00000141839 ENTREZGENE
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro GLUT UniProtKB/TrEMBL
  Major_facilitator_SF UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
  Sub_transporter UniProtKB/TrEMBL
  Sugar/inositol_transpt UniProtKB/TrEMBL
  Sugar_transporter_CS UniProtKB/TrEMBL
KEGG Report rno:501925 UniProtKB/TrEMBL
NCBI Gene 501925 ENTREZGENE
PANTHER PTHR23503 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER MEMBER 9 UniProtKB/TrEMBL
Pfam Sugar_tr UniProtKB/TrEMBL
PhenoGen Slc2a9 PhenoGen
PRINTS SUGRTRNSPORT UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
  SUGAR_TRANSPORT_1 UniProtKB/TrEMBL
  SUGAR_TRANSPORT_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000005302 RatGTEx
Superfamily-SCOP MFS_gen_substrate_transporter UniProtKB/TrEMBL
UniProt A0A0G2JW25 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AEN5_RAT UniProtKB/TrEMBL
  A0A8I6AVN8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G921 ENTREZGENE, UniProtKB/TrEMBL
  A6IJT3 ENTREZGENE, UniProtKB/TrEMBL
  D4A237 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-24 Slc2a9  solute carrier family 2 member 9  Slc2a9  solute carrier family 2 (facilitated glucose transporter), member 9  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-05 Slc2a9  solute carrier family 2 (facilitated glucose transporter), member 9  LOC501925  similar to solute carrier family 2, member 9 isoform a  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC501925  similar to solute carrier family 2, member 9 isoform a      Symbol and Name status set to provisional 70820 PROVISIONAL