Bss82 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bss82 (Bone structure and strength QTL 82) Rattus norvegicus

Symbol: Bss82
Name: Bone structure and strength QTL 82
RGD ID: 2313100
Also known as: Pqctf11
Trait: tibia size trait   (VT:0100001)    
Measurement Type: tibia midshaft cross-sectional area   (CMO:0001717)    
LOD Score: 3.0
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21437,669,719 - 82,669,719RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01440,315,610 - 85,315,610RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01440,124,755 - 85,124,755RGDRnor5.0
RGSC_v3.41440,156,028 - 85,156,028RGDRGSC3.4
Cross Type: intercross
Strains Crossed: GK/KyoSwe F344/DuCrlSwe 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

Rat Strain
F344/DuCrlSwe  (IEA)
GK/KyoSwe  (IEA)

References

References - curated
1. Lagerholm S, etal., J Bone Miner Res. 2009 Jun;24(6):1066-74.
Related QTLs

Related QTL Description Reference
Bss81 maps to same region RGD:2312767
Bss84 maps to same region RGD:2312767
Bss83 maps to same region RGD:2312767


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
40995005LOC120096743U6 spliceosomal RNA143769257737692683Rat
41386864LOC120096772U7 small nuclear RNA143795682137956881Rat
40926311LOC120096533uncharacterized LOC120096533143804510538050006Rat
41347535LOC120096823small nucleolar RNA SNORA17143847900538479130Rat
41044971LOC120096534uncharacterized LOC120096534143848770738491128Rat
1305521Gnpda2glucosamine-6-phosphate deaminase 2143852066338538713Rat
1310774Guf1GTP binding elongation factor GUF1143853795338557331Rat
1310766Yipf7Yip1 domain family, member 7143857104538599070Rat
41216070LOC120096807small nucleolar RNA SNORA17143861569838615827Rat
1312020Kctd8potassium channel tetramerization domain containing 8143877327439018182Rat
41176151LOC12009670260S ribosomal protein L7-like143878280338783597Rat
1594181Hspd1-ps4heat shock protein 1, pseudogene 4143897226638974496Rat
1561787RGD1561787similar to Ab2-076143915989139161654Rat
41328132LOC120096600uncharacterized LOC120096600143943346339437629Rat
41073061LOC120096811small nucleolar RNA SNORA17143961071539610842Rat
1565933LOC360933similar to Ac1591143973808439791430Rat
41144709LOC120096601uncharacterized LOC120096601143974936039763419Rat
9198670LOC103692836uncharacterized LOC103692836143976352839775762Rat
41299431LOC120096796small nucleolar RNA SNORA48143980705839807196Rat
1586204Hspd1-ps2heat shock protein 1, pseudogene 2143995257739954795Rat
1564635Grxcr1glutaredoxin and cysteine rich domain containing 1144000416940126571Rat
41243425LOC120096602uncharacterized LOC120096602144023267440243612Rat
1309619Atp8a1ATPase phospholipid transporting 8A1144031501340557572Rat
7504244LOC102547308uncharacterized LOC102547308144034595840348826Rat
41279334LOC120096603uncharacterized LOC120096603144035952540364571Rat
1565710Shisa3shisa family member 3144056367240568244Rat
41086856LOC120096535uncharacterized LOC120096535144060294640608991Rat
7621128LOC102547499uncharacterized LOC102547499144061905740622769Rat
11378147LOC108352744glyceraldehyde-3-phosphate dehydrogenase pseudogene144063372140634794Rat
41339146LOC120096604uncharacterized LOC120096604144070047440717094Rat
11440419LOC108352745uncharacterized LOC108352745144071725840752979Rat
1584735Bend4BEN domain containing 4144075304840788686Rat
11512407LOC108352852glyceraldehyde-3-phosphate dehydrogenase pseudogene144080916940810344Rat
1593180Slc30a9solute carrier family 30 member 9144081628440870992Rat
708371Tmem33transmembrane protein 33144088848540910715Rat
1560582Phox2bpaired-like homeobox 2b144106601241069202Rat
1305269Limch1LIM and calponin homology domains 1144111257941425185Rat
41251030LOC120096605uncharacterized LOC120096605144125597041257155Rat
41396064LOC120096849U2 spliceosomal RNA144130747441307627Rat
3928Uchl1ubiquitin C-terminal hydrolase L1144148503341495590Rat
40944653LOC120096871U6 spliceosomal RNA144149731241497418Rat
1562438Apbb2amyloid beta precursor protein binding family B member 2144155791841878622Rat
1310137Nsun7NOP2/Sun RNA methyltransferase family member 7144187750041935238Rat
41300422LOC120096757U6 spliceosomal RNA144204096842041072Rat
1563570RGD1563570similar to ribosomal protein S23144204574942046255Rat
41135427LOC120096606uncharacterized LOC120096606144204813142054952Rat
1359713Rbm47RNA binding motif protein 47144205329042191572Rat
621534Chrna9cholinergic receptor nicotinic alpha 9 subunit144223521842241939Rat
1598004LOC681268similar to RIKEN cDNA 2410004L22144232338442323749Rat
1307623Rhohras homolog family member H144234113542371971Rat
1565738N4bp2NEDD4 binding protein 2144234269042479861Rat
1307094Pds5aPDS5 cohesin associated factor A144255165342651074Rat
41034751LOC120096749U6 spliceosomal RNA144259026142590365Rat
1590581LOC680579similar to ribosomal protein L14144259403942594681Rat
1311626Ube2kubiquitin-conjugating enzyme E2K144265801642718899Rat
2324107LOC100362751ribosomal protein P2-like144274528042745734Rat
1311122Smim14small integral membrane protein 14144278336142829762Rat
621879UgdhUDP-glucose 6-dehydrogenase144284870442872351Rat
1307270Liaslipoic acid synthetase144287669942893824Rat
62049Rpl9ribosomal protein L9144289394542897140Rat
1308227Klbklotho beta144289905042950788Rat
2322187LOC100363869ribosomal protein L32-like144294633342946852Rat
11373177LOC10835282840S ribosomal protein S13 pseudogene144295228842952858Rat
620619Rfc1replication factor C subunit 1144296627943041372Rat
41233454LOC120096833small nucleolar RNA SNORA77144299189242992020Rat
1306997Wdr19WD repeat domain 19144304247443106337Rat
1584389LOC684970similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP)144312916643130555Rat
6496349LOC100910864mitochondrial carrier triple repeat protein 1-like144314091043144124Rat
1309661Klhl5kelch-like family member 5144314425443206192Rat
7561511LOC102556650uncharacterized LOC102556650144318871143202471Rat
1562424Tmem156transmembrane protein 156144322146443252453Rat
1560201Fam114a1family with sequence similarity 114, member A1144327569343346227Rat
11439749LOC108352749uncharacterized LOC108352749144330262343323885Rat
1303030Tlr6toll-like receptor 6144336216443374500Rat
1309975Tlr1toll-like receptor 1144338412743396765Rat
1311569Tlr10toll-like receptor 10144340084343414056Rat
1593290Klf3Kruppel like factor 3144347476743505801Rat
41321355LOC120096746U6 spliceosomal RNA144354501143545117Rat
9104957LOC103692863uncharacterized LOC103692863144365875243660819Rat
4888551Mir328bmicroRNA 328b144366306843663185Rat
1566409RGD1566409similar to 60S ribosomal protein L29 (P23)144370741243707862Rat
7668188LOC102552762uncharacterized LOC102552762144372910643734358Rat
41159606LOC120096607uncharacterized LOC120096607144385977043878152Rat
1304562Tbc1d1TBC1 domain family member 1144393682044135133Rat
41099168LOC120096610uncharacterized LOC120096610144396978643970591Rat
41319905LOC120096609uncharacterized LOC120096609144406034644065175Rat
41166496LOC120096608uncharacterized LOC120096608144406715344069117Rat
41378422LOC120096822small nucleolar RNA SNORA17144414919344149324Rat
1306061Pgm2phosphoglucomutase 2144416631444199823Rat
41128148LOC120096845U2 spliceosomal RNA144420861644208784Rat
41069626LOC120096800small nucleolar RNA SNORA17144427774844277879Rat
1597718LOC685165similar to serine/threonine/tyrosine interacting protein144428672744287397Rat
6492244LOC100911506uncharacterized LOC100911506144431539744318610Rat
1307468Rell1RELT-like 1144431864044378541Rat
1561612LOC498368similar to RIKEN cDNA 0610040J01144438738644478344Rat
1563065Nwd2NACHT and WD repeat domain containing 2144448004944671417Rat
1593179LOC498369similar to neighbor of Brca1 gene 1144479125344793245Rat
41096908LOC120096844U2 spliceosomal RNA144484790744848101Rat
11361894LOC108352853glyceraldehyde-3-phosphate dehydrogenase pseudogene144503481945035853Rat
1309563Slc25a52solute carrier family 25, member 52144539645445398337Rat
41191145LOC120096759U6 spliceosomal RNA144547900745479109Rat
1595096LOC685352similar to CG17293-PA144580766245808729Rat
1595055LOC685393similar to lin-9 homolog144587754745880236Rat
1596919LOC678765similar to CG17293-PA144620044246349977Rat
41003067LOC120096870U6 spliceosomal RNA144648489546485001Rat
1587839LOC685935similar to splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)144660261946605408Rat
2323176Dthd1death domain containing 1144667043846673183Rat
1306452Arap2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2144671765746917326Rat
41185834LOC120096846U2 spliceosomal RNA144690207046902222Rat
41023908LOC120096816small nucleolar RNA SNORA17144698782146987951Rat
1595890LOC301861similar to ARP2 actin-related protein 2 homolog (yeast)144747096747472050Rat
41189851LOC120096611uncharacterized LOC120096611144791473147929659Rat
7641928LOC102548364uncharacterized LOC102548364144871382948716195Rat
6486870LOC100912410ribosome biogenesis protein NSA2 homolog144875970148769350Rat
11443889LOC108348204high mobility group protein B3 pseudogene144914941549150197Rat
41008038LOC120096826small nucleolar RNA SNORA17144940536949405490Rat
1587622LOC688557similar to 60S ribosomal protein L7144941213449412891Rat
41165825LOC120096754U6 spliceosomal RNA144968495449685056Rat
41118704LOC120096872U6 spliceosomal RNA145033007150330177Rat
11478268LOC108352854dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like145045859650458890Rat
1566292RGD1566292similar to Chain A, Human Ubiquitin-Conjugating Enzyme Ubc9145050730250507808Rat
1586202LOC289647similar to Sumo1/sentrin/Smt3 specific protease 17145080444650806452Rat
41266703LOC120096514endogenous retrovirus group K member 6 Gag polyprotein-like145087663650916929Rat
1589992Cox7a2l2cytochrome c oxidase subunit VIIa polypeptide 2-like 2145130116951301612Rat
1563725RGD1563725similar to C1GALT1-specific chaperone 1145145932551460537Rat
41239410LOC120096612uncharacterized LOC120096612145156829551570088Rat
41051904LOC120096536uncharacterized LOC120096536145158754151598334Rat
2316380Vom1r-ps103vomeronasal 1 receptor pseudogene 103145166190851662607Rat
1588879LOC688409similar to microfibrillar-associated protein 1145184823651849369Rat
1303209Pcdh7protocadherin 7145247180152901696Rat
40926625LOC12009661360S ribosomal protein L9-like145270794852712379Rat
7645018LOC102549643uncharacterized LOC102549643145292914352930478Rat
7678464LOC102549744uncharacterized LOC102549744145293083552933116Rat
41392624LOC120096515dnaJ homolog subfamily A member 3, mitochondrial-like145324997353358181Rat
41209678LOC120096829small nucleolar RNA SNORA17145358107953581212Rat
1587649LOC688530similar to esterase D/formylglutathione hydrolase145360483253605978Rat
41212442LOC120096827small nucleolar RNA SNORA17145404088054040999Rat
41096139LOC120096848U2 spliceosomal RNA145448406554484191Rat
41362307LOC120096855U4 spliceosomal RNA145463594154636079Rat
41216713LOC120096851U2 spliceosomal RNA145472054654720639Rat
1586201LOC289651Dnmt3a-ps3 pseudogene145476836554770941Rat
2325120LOC100359605hypothetical LOC100359605145484626454854869Rat
41257153LOC120096516COP9 signalosome complex subunit 8-like145576474855765405Rat
41359523LOC12009651740S ribosomal protein S2-like145593262755934118Rat
40999201LOC120096738U6 spliceosomal RNA145629855156298654Rat
1562755RGD1562755similar to 60S ribosomal protein L23a145656623856572088Rat
41217372LOC120096537cofilin-1-like145674964356750117Rat
1304641Stim2stromal interaction molecule 2145687842857004405Rat
41116190LOC120096843U2 spliceosomal RNA145695727456957478Rat
1304958Tbc1d19TBC1 domain family, member 19145708430557200221Rat
40957555LOC120096614uncharacterized LOC120096614145724686657262591Rat
2289Cckarcholecystokinin A receptor145729239757300747Rat
7543920LOC102552214uncharacterized LOC102552214145732206057326658Rat
1593096Rbpjrecombination signal binding protein for immunoglobulin kappa J region145733849357523330Rat
2320504LOC10036125960S ribosomal protein L13-like145763235857633066Rat
1565192Smim20small integral membrane protein 20145771130457722681Rat
1562860Sel1l3SEL1L family member 3145777551557882076Rat
620889Slc34a2solute carrier family 34 member 2145791093157930236Rat
41233465LOC120096615uncharacterized LOC120096615145793043557947798Rat
11459947LOC108352756uncharacterized LOC108352756145800334958013825Rat
2320358LOC100361307hypothetical LOC100361307145807814558079340Rat
1306572Anapc4anaphase promoting complex subunit 4145812599558159253Rat
1311414Zcchc4zinc finger CCHC-type containing 4145816545958207071Rat
1359515Pi4k2bphosphatidylinositol 4-kinase type 2 beta145822179058248716Rat
1589491SepsecsSep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase145831148458341745Rat
7627395LOC102552822uncharacterized LOC102552822145834457958368002Rat
1310391Lgi2leucine-rich repeat LGI family, member 2145841596558443450Rat
9279922LOC10369304540S ribosomal protein SA pseudogene145846651958467175Rat
1582968Ccdc149coiled-coil domain containing 149145850958358605017Rat
3733Sod3superoxide dismutase 3145861010458615845Rat
40926627LOC120096780small nucleolar RNA SNORA70145863795558638086Rat
11368675LOC108352757uncharacterized LOC108352757145876965958787020Rat
1308072Dhx15DEAH-box helicase 15145878714758825083Rat
620925Ppargc1aPPARG coactivator 1 alpha145886075259516525Rat
40938133LOC12009650260S ribosomal protein L36-like145887752058916595Rat
1596185LOC689119similar to high mobility group nucleosomal binding domain 1146003031060030603Rat
41126556LOC120096850U2 spliceosomal RNA146032993260330000Rat
41338044LOC120096616uncharacterized LOC120096616146041493160427292Rat
2322459LOC100360292hypothetical LOC100360292146054946060551655Rat
1309539Gba3glucosylceramidase beta 3146057536860662952Rat
41212480LOC120096518cytochrome c, somatic-like146071556760715921Rat
1304914Adgra3adhesion G protein-coupled receptor A3146087471960976341Rat
1597121LOC364170similar to Galectin-9 (36 kDa beta-galactoside-binding lectin) (Urate transporter/channel) (UAT)146110879861109838Rat
1565332RGD1565332similar to interferon induced transmembrane protein 3146123326961233688Rat
708539Kcnip4potassium voltage-gated channel interacting protein 4146138069962531399Rat
41210570LOC120096504uncharacterized LOC120096504146140677661426196Rat
41124397LOC120096503T-complex protein 1 subunit zeta-like146155191261553037Rat
7688150LOC102547995H/ACA ribonucleoprotein complex subunit 4-like146222866462230195Rat
1597120LOC364172similar to eukaryotic translation elongation factor 1 alpha 2146231418462315751Rat
1311045Pacrglparkin coregulated like146253201962556987Rat
69310Slit2slit guidance ligand 2146261633762955934Rat
2325375Mir218-1microRNA 218-1146270975962709868Rat
4888549Mir3565microRNA 3565146270975962709872Rat
1594761LOC689292similar to 40S ribosomal protein S3a (V-fos transformation effector protein)146309404163094488Rat
9114441LOC10369315940S ribosomal protein S6 pseudogene146311098463111679Rat
1593175LOC498384similar to aldehyde dehydrogenase family 9, subfamily A1146339676463403072Rat
41273649LOC120096617uncharacterized LOC120096617146427546364291626Rat
11516851LOC108352762uncharacterized LOC108352762146445666364539882Rat
41106175LOC120096771U7 small nuclear RNA146479395964794021Rat
41152588LOC120096764U7 small nuclear RNA146491902164919082Rat
1561241Lcorlligand dependent nuclear receptor corepressor-like146527133965407732Rat
41004689LOC120096618DNA-directed RNA polymerase III subunit RPC6-like146532810865349296Rat
1562646Ncapgnon-SMC condensin I complex, subunit G146540423565432902Rat
1586199LOC289672similar to Heat shock protein HSP 90-beta (HSP 84)146544238565447595Rat
7661830Dcaf16DDB1 and CUL4 associated factor 16146544963165450875Rat
41175757LOC120096619uncharacterized LOC120096619146545210065476857Rat
1564950Fam184bfamily with sequence similarity 184, member B146547548965591388Rat
1305875Med28mediator complex subunit 28146559478565603583Rat
1307985Lap3leucine aminopeptidase 3146560837565627359Rat
1591112Clrn2clarin 2146565655065666193Rat
619915Qdprquinoid dihydropteridine reductase146567025165683853Rat
1597119LOC364176similar to eukaryotic translation initiation factor 4A, isoform 1146577343365774657Rat
1591068LOC689559similar to KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1146584319765843811Rat
40963551LOC120096620uncharacterized LOC120096620146596830565999415Rat
1307921Ldb2LIM domain binding 2146627704466598071Rat
11442100LOC108352764uncharacterized LOC108352764146663696566655348Rat
41184450LOC120096621uncharacterized LOC120096621146666889166760974Rat
41403222LOC120096622uncharacterized LOC120096622146681288766834088Rat
7696919LOC102552900uncharacterized LOC102552900146686461266865821Rat
1309656Tapt1transmembrane anterior posterior transformation 1146687346766919737Rat
41008161LOC120096623uncharacterized LOC120096623146695618866980445Rat
40943776LOC120096765U7 small nuclear RNA146697698366977044Rat
69367Prom1prominin 1146698954567094534Rat
621211Fgfbp1fibroblast growth factor binding protein 1146710368667107492Rat
40946290LOC120096624uncharacterized LOC120096624146715451767160718Rat
1586200Apex2l1APEX nuclease (apurinic/apyrimidinic endonuclease) 2-like 1146716653067168080Rat
2303Cd38CD38 molecule146717206267212328Rat
620344Bst1bone marrow stromal cell antigen 1146725370667270203Rat
11401788LOC108352765uncharacterized LOC108352765146730076467304919Rat
1306887Fbxl5F-box and leucine-rich repeat protein 5146730510967347383Rat
9155016LOC103693079cytochrome c, somatic pseudogene146732340667325242Rat
1561042Cc2d2acoiled-coil and C2 domain containing 2A146734900467435883Rat
1306978C1qtnf7C1q and TNF related 7146746788867580477Rat
1309506Isca2-ps1iron-sulfur cluster assembly 2, pseudogene 1146771907967719877Rat
1307485Cpeb2cytoplasmic polyadenylation element binding protein 2146778750367839973Rat
9108325LOC103693081uncharacterized LOC103693081146791065667971582Rat
9445976LOC103693082uncharacterized LOC103693082146827440168318468Rat
2319287Rab5al1Rab5a, member RAS oncogene family-like 1146833236068334470Rat
1565560RGD1565560similar to ribosomal protein S11146834104568341815Rat
7686464LOC102550275uncharacterized LOC102550275146874731768759920Rat
1561694RGD1561694similar to High mobility group protein 2 (HMG-2)146904559069046623Rat
41027054LOC120096625uncharacterized LOC120096625146907552769081053Rat
11427999LOC108352768uncharacterized LOC108352768146910432069108435Rat
621413Bod1l1biorientation of chromosomes in cell division 1-like 1146910848369163255Rat
7582704LOC102550431uncharacterized LOC102550431146917935469199671Rat
1584617Nkx3-2NK3 homeobox 2146918379569186182Rat
41228514LOC120096626uncharacterized LOC120096626146923832969246883Rat
2319371LOC100361803DNA-directed RNA polymerase III subunit RPC6-like146923955869242354Rat
620891Rab28RAB28, member RAS oncogene family146924584669322968Rat
1584806LOC679735similar to clusterin associated protein 1146942050369421755Rat
41174488LOC120096627developmental pluripotency-associated protein 3-like146945677769460079Rat
7637966LOC102550787uncharacterized LOC102550787146961946869699696Rat
41402058LOC120096847U2 spliceosomal RNA146973809469738232Rat
2319286LOC100361892Casitas B-lineage lymphoma-like 1-like146988445069885920Rat
41049027LOC120096798small nucleolar RNA SNORA48147072567770725820Rat
41375811LOC120096628uncharacterized LOC120096628147075478670773614Rat
41026202LOC120096742U6 spliceosomal RNA147110536771105473Rat
71084Hs3st1heparan sulfate-glucosamine 3-sulfotransferase 1147118582671223263Rat
40982593LOC120096805small nucleolar RNA SNORA17147128817071288300Rat
7582281LOC102547538uncharacterized LOC102547538147141470071436779Rat
41216753LOC120096629uncharacterized LOC120096629147141654271450253Rat
41037518LOC120096630uncharacterized LOC120096630147147693571491085Rat
7628136LOC102547760uncharacterized LOC102547760147153081571543942Rat
11468209LOC108352769uncharacterized LOC108352769147160525971619000Rat
7647850LOC102547860uncharacterized LOC102547860147172863371756170Rat
41376686LOC120096631uncharacterized LOC120096631147189142671918318Rat
1562417Clnkcytokine-dependent hematopoietic cell linker147192389472101180Rat
41091094LOC120096873U6 spliceosomal RNA147198380671983907Rat
41114651LOC120096632uncharacterized LOC120096632147206246772124747Rat
41336455LOC120096758U6 spliceosomal RNA147210890772109011Rat
1564150Zfp518bzinc finger protein 518B147212108572140479Rat
1593174LOC498391similar to non-POU domain containing, octamer-binding147214458972154945Rat
1598288Rrm1-ps1ribonucleotide reductase M1, pseudogene 1147217738672180323Rat
11478553LOC108352833serine/arginine-rich splicing factor 3 pseudogene147218261672183963Rat
11463890LOC108352771uncharacterized LOC108352771147224599372257784Rat
1305789Wdr1WD repeat domain 1147225803272291768Rat
1597012Slc2a9solute carrier family 2 member 9147232833472461981Rat
2523Drd5dopamine receptor D5147248934772490774Rat
631389Otop1otopetrin 1147250503672532497Rat
1310481Tmem128transmembrane protein 128147253953072548623Rat
1305352LyarLy1 antibody reactive147257687872590854Rat
1306733Zbtb49zinc finger and BTB domain containing 49147259067572612404Rat
41015810LOC120096633uncharacterized LOC120096633147264573272647007Rat
2222Nsg1neuronal vesicle trafficking associated 1147264877172670521Rat
41134293LOC120096634uncharacterized LOC120096634147265764872660071Rat
1310058Stx18syntaxin 18147267068372761423Rat
40931371LOC120096538uncharacterized LOC120096538147282168672824398Rat
9431497LOC103693088uncharacterized LOC103693088147290027672923277Rat
620929Msx1msh homeobox 1147296117072964970Rat
41321492LOC120096635uncharacterized LOC120096635147297097972975894Rat
41126470LOC120096636uncharacterized LOC120096636147298685772997356Rat
1561846Cytl1cytokine like 1147305387673058886Rat
1306173Stk32bserine/threonine kinase 32B147307794473336128Rat
41215906LOC120096808small nucleolar RNA SNORA17147320870873208839Rat
41214676LOC120096637uncharacterized LOC120096637147325931573264855Rat
7518008LOC102554915prostaglandin E synthase 3-like147334096673345089Rat
1310417Evc2EvC ciliary complex subunit 2147336683273454539Rat
735186EvcEvC ciliary complex subunit 1147345618173498955Rat
2407Crmp1collapsin response mediator protein 1147350993373556192Rat
40960445LOC120096638lactoylglutathione lyase-like147353484973535402Rat
7596857LOC102553825uncharacterized LOC102553825147356120973646151Rat
1562401Jakmip1janus kinase and microtubule interacting protein 1147364736673766830Rat
41012300LOC120096861U4 spliceosomal RNA147379667773796760Rat
68954Wfs1wolframin ER transmembrane glycoprotein147381047873834993Rat
620920Ppp2r2cprotein phosphatase 2, regulatory subunit B, gamma147384654773931178Rat
11510814LOC10835277360S ribosomal protein L35a pseudogene147390897073909382Rat
11485372LOC108352775uncharacterized LOC108352775147394486773948002Rat
1308840Man2b2mannosidase, alpha, class 2B, member 2147396907973994089Rat
628631Mrfap1Morf4 family associated protein 1147400251274004289Rat
1306037Bloc1s4biogenesis of lysosomal organelles complex 1 subunit 4147404302574044325Rat
9097301LOC103693769uncharacterized LOC103693769147404977374055535Rat
1596848LOC680039hypothetical protein LOC680039147409442174159316Rat
41112705LOC120096818small nucleolar RNA SNORA17147411668774116816Rat
41082880LOC120096639uncharacterized LOC120096639147417208674176212Rat
1309993Tbc1d14TBC1 domain family, member 14147417265274272182Rat
7635591Selenok-ps3selenoprotein K, pseudogene 3147420420174204999Rat
1305153Ccdc96coiled-coil domain containing 96147427656874279072Rat
1561605Tada2btranscriptional adaptor 2B147427928674290758Rat
70947Grpel1GrpE-like 1, mitochondrial147429202374298243Rat
1310621Sorcs2sortilin-related VPS10 domain containing receptor 2147437108974735943Rat
1307368Psapl1prosaposin-like 1147454464674547206Rat
619959Afap1actin filament associated protein 1147474332274856295Rat
1303094Ablim2actin binding LIM protein family, member 2147486540974990334Rat
1305610Sh3tc1SH3 domain and tetratricopeptide repeats 1147500569175050001Rat
1308120Htra3HtrA serine peptidase 3147506891775097315Rat
69245Acox3acyl-CoA oxidase 3, pristanoyl147513398675176767Rat
1308380Trmt44tRNA methyltransferase 44147517533175204291Rat
620496Cpzcarboxypeptidase Z147522369275246946Rat
41086352LOC120096640uncharacterized LOC120096640147529460975296325Rat
41103205LOC120096641uncharacterized LOC120096641147535436075357481Rat
1304928Hmx1H6 family homeobox 1147536120775364993Rat
11451885LOC108352778uncharacterized LOC108352778147540019275403500Rat
2058Adra2cadrenoceptor alpha 2C147547114375472846Rat
2318741LOC100362142mCG20085-like147561744175619176Rat
620700Lrpap1LDL receptor related protein associated protein 1147565137175663380Rat
1566416Dok7docking protein 7147566544475699413Rat
70909HgfacHGF activator147570758875714182Rat
3564Rgs12regulator of G-protein signaling 12147571592575824012Rat
11503487LOC10835278040S ribosomal protein S17 pseudogene147578019275784552Rat
11489712LOC108352834acidic proline-rich protein PRP25-like147580977775810250Rat
41396070NEWGENE_40926764transfer RNA proline (anticodon AGG)147582503975825113Rat
7565325LOC102556834uncharacterized LOC102556834147582645175831905Rat
1565796Msantd1Myb/SANT DNA binding domain containing 1147583236875845687Rat
68337Htthuntingtin147584583675996094Rat
61858Grk4G protein-coupled receptor kinase 4147599855476080808Rat
1305605Nop14NOP14 nucleolar protein147608131876102454Rat
1311900Mfsd10major facilitator superfamily domain containing 10147610376276107385Rat
2041Add1adducin 1147610864376167267Rat
40938982LOC120096505uncharacterized LOC120096505147616736176176360Rat
1310588Sh3bp2SH3-domain binding protein 2147617609776213331Rat
41249459LOC120096774U1 spliceosomal RNA147620785276207995Rat
1307717Tnip2TNFAIP3 interacting protein 2147622828376246609Rat
1309634Fam193afamily with sequence similarity 193, member A147625010376382525Rat
41117376LOC120096838small nucleolar RNA U13147635049976350595Rat
3583Rnf4ring finger protein 4147640129276423270Rat
1564567Cfap99cilia and flagella associated protein 99147642392376468170Rat
9232718LOC103693090uncharacterized LOC103693090147643048676447245Rat
1310151Zfyve28zinc finger FYVE-type containing 28147646842476554039Rat
1305093Mxd4Max dimerization protein 4147656210576576224Rat
41218591LOC120096643uncharacterized LOC120096643147657959276580225Rat
7675413PolnDNA polymerase nu147657998376752460Rat
1591723Haus3HAUS augmin-like complex, subunit 3147658054976599542Rat
1305719Nat8lN-acetyltransferase 8-like147675607776762712Rat
1560394RGD1560394RGD1560394147676814576769774Rat
41309848LOC120096642uncharacterized LOC120096642147676986876776620Rat
41099865LOC120096644uncharacterized LOC120096644147678400976808773Rat
1305556Nelfanegative elongation factor complex member A147680892076832998Rat
1307955Nsd2nuclear receptor binding SET domain protein 2147683319476911304Rat
1359678Letm1leucine zipper and EF-hand containing transmembrane protein 1147694264776982220Rat
41108877LOC12009670360S ribosomal protein L18-like147695910076962041Rat
620714Fgfr3fibroblast growth factor receptor 3147698724277002671Rat
40952397LOC120096748U6 spliceosomal RNA147703748577037588Rat
1302948Tacc3transforming, acidic coiled-coil containing protein 3147705120977065343Rat
41246592LOC120096793small nucleolar RNA SNORA18147705648377056611Rat
1310828Tmem129transmembrane protein 129, E3 ubiquitin ligase147706539177070871Rat
1584682Slbpstem-loop binding protein147707144177081911Rat
1563315Fam53afamily with sequence similarity 53, member A147708817877124395Rat
1597116LOC364185similar to Proteasome subunit beta type 3 (Proteasome theta chain) (Proteasome chain 13) (Proteasome component C10-II)147715196677153837Rat
1564874Nkx1-1NK1 homeobox 1147729667677300575Rat
1306371UvssaUV-stimulated scaffold protein A147730918877351922Rat
1309877Maeamacrophage erythroblast attacher, E3 ubiquitin ligase147735726177390683Rat
2441Ctbp1C-terminal binding protein 1147745558077482821Rat
708584Spon2spondin 2147750569577518001Rat
3713Slc5a1solute carrier family 5 member 1147755399077618589Rat
41320425LOC120096797small nucleolar RNA SNORA48147764235877642497Rat
3978Ywhahtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta147769633277705715Rat
41035330LOC120096506uncharacterized LOC120096506147772204177727496Rat
1311535Depdc5DEP domain containing 5, GATOR1 subcomplex subunit147773229777862924Rat
41039274LOC120096762U6 spliceosomal RNA147781364677813748Rat
2319299LOC100361879ATP synthase subunit epsilon, mitochondrial-like147786348077864135Rat
1305469Prr14lproline rich 14-like147786984877937141Rat
1596729Pisdphosphatidylserine decarboxylase147794192777991021Rat
1560636Sfi1SFI1 centrin binding protein147799096578048352Rat
1560908Eif4enif1eukaryotic translation initiation factor 4E nuclear import factor 1147805611578099846Rat
1588187Snrpg-ps1small nuclear ribonucleoprotein polypeptide G, pseudogene 1147806813678068530Rat
1304993Drg1developmentally regulated GTP binding protein 1147810387678119976Rat
1308337Patz1POZ (BTB) and AT hook containing zinc finger 1147815459078173032Rat
41119182LOC120096507uncharacterized LOC120096507147815964578204665Rat
40971467LOC120096766U7 small nuclear RNA147818679478186857Rat
1311203Pik3ip1phosphoinositide-3-kinase interacting protein 1147820353978216616Rat
62056Limk2LIM domain kinase 2147820818278286106Rat
7740095LOC10254687060S ribosomal protein L7-like147825252078253445Rat
1564777Rnf185ring finger protein 185147829251778329832Rat
1305323Pla2g3phospholipase A2, group III147836762578373913Rat
620541Inpp5jinositol polyphosphate-5-phosphatase J147837416178385305Rat
1565037Selenomselenoprotein M147839582678398429Rat
1310216Smtnsmoothelin147839859578420908Rat
6499571LOC100910250prefoldin subunit 4-like147846415878464609Rat
11478544LOC108352784uncharacterized LOC108352784147847105578487135Rat
9685395Tug1taurine up-regulated 1147851989478526927Rat
1310842Morc2MORC family CW-type zinc finger 2147852960378571375Rat
1310505Osbp2oxysterol binding protein 2147858508878746785Rat
41090605LOC120096813small nucleolar RNA SNORA17147867492978675059Rat
7642008LOC102556795uncharacterized LOC102556795147875798478770849Rat
9366226LOC103693132transcription initiation factor IIA subunit 2 pseudogene147877623478776984Rat
1308775RGD1308775similar to RIKEN cDNA 4921536K21147878131578789956Rat
1306929Dusp18dual specificity phosphatase 18147879018378811576Rat
708484Slc35e4solute carrier family 35, member E4147880332078810186Rat
620681Tcn2transcobalamin 2147881334378828549Rat
1559814Pes1pescadillo ribosomal biogenesis factor 1147885075478867134Rat
1583379Gal3st1galactose-3-O-sulfotransferase 1147886804978886402Rat
1565810Sec14l4SEC14-like lipid binding 4147891275078928799Rat
9463298LOC103693135uncharacterized LOC103693135147892594478927167Rat
41394454LOC120096646uncharacterized LOC120096646147893168378942634Rat
41214355LOC12009664560S ribosomal protein L9-like147894299578943846Rat
620812Sec14l3SEC14-like lipid binding 3147894456878955608Rat
1359705Mtfp1mitochondrial fission process 1147896843478972274Rat
7704064LOC102549281uncharacterized LOC102549281147897362678990088Rat
621779Sec14l2SEC14-like lipid binding 2147897380578998480Rat
1310738Rnf215ring finger protein 215147900665979013091Rat
1584653Ccdc157coiled-coil domain containing 157147901243379031458Rat
1311477Sf3a1splicing factor 3a, subunit 1147903139479052144Rat
1311641Tbc1d10aTBC1 domain family, member 10a147905182279083603Rat
1304774Castor1cytosolic arginine sensor for mTORC1 subunit 1147908613679090549Rat
1585012Osmoncostatin M147910363879108500Rat
620865LifLIF, interleukin 6 family cytokine147913104979140486Rat
41008473LOC120096858U4 spliceosomal RNA147920869279208868Rat
1565447Hormad2HORMA domain containing 2147921501379300447Rat
9071266LOC103693146non-histone chromosomal protein HMG-17 pseudogene147924762779248290Rat
41182224LOC120096841U2 spliceosomal RNA147925758779257761Rat
1310972Mtmr3myotubularin related protein 3147934052379460947Rat
1561422Ascc2activating signal cointegrator 1 complex subunit 2147950344979547801Rat
41308091NEWGENE_6576114transfer RNA threonine (anticodon AGU)147955217979552251Rat
1595126Uqcr10ubiquinol-cytochrome c reductase, complex III subunit X147956615179569017Rat
1559774Zmat5zinc finger, matrin type 5147956864479599595Rat
1359269Cabp7calcium binding protein 7147959882279609172Rat
3169Nf2NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor147962739979710709Rat
1310419Nipsnap1nipsnap homolog 1147973423479758101Rat
1304991Thoc5THO complex 5147975880579792718Rat
41212773LOC120096770U7 small nuclear RNA147979888379798945Rat
40985238LOC120096769U7 small nuclear RNA147980828579808347Rat
41224647LOC120096767U7 small nuclear RNA147981769179817753Rat
41067315LOC120096768U7 small nuclear RNA147982574679825808Rat
3159Nefhneurofilament heavy chain147983036279840347Rat
2064Ap1b1adaptor related protein complex 1 subunit beta 1147987948279930778Rat
41389389LOC120096836small nucleolar RNA SNORD125147992596379926059Rat
41377061LOC120096647uncharacterized LOC120096647147994542579946151Rat
1311206Gas2l1growth arrest-specific 2 like 1147995170279961830Rat
1306100Rasl10aRAS-like, family 10, member A147995509379956471Rat
1307258Ewsr1EWS RNA-binding protein 1147996536579994108Rat
1311827Rhbdd3rhomboid domain containing 3147999411180000294Rat
1593795Emid1EMI domain containing 1148000048680043561Rat
620789Kremen1kringle containing transmembrane protein 1148008187080147489Rat
1593771Znrf3zinc and ring finger 3148015785480313456Rat
41368918LOC120096648uncharacterized LOC120096648148036530780368769Rat
7673923LOC102549967uncharacterized LOC102549967148036874480377124Rat
1303073Xbp1X-box binding protein 1148039062980395713Rat
1561762Ccdc117coiled-coil domain containing 117148039923680409824Rat
41271824LOC120096814small nucleolar RNA SNORA17148042132880421443Rat
1592623Frg2FSHD region gene 2148042726080429560Rat
41214202LOC120096650uncharacterized LOC120096650148044524080451672Rat
735187Ankrd36ankyrin repeat domain 36148045169980568458Rat
41062510LOC12009664940S ribosomal protein S24-like148052908380531185Rat
1597115LOC364191similar to CG18041-PA148053832180540654Rat
7574864LOC10255011960S ribosomal protein L18-like148056501680565530Rat
1306014Mrps24mitochondrial ribosomal protein S24148058467180588801Rat
1564681Urgcpupregulator of cell proliferation148059463780638972Rat
11368922LOC108352787uncharacterized LOC108352787148063897680661336Rat
70941Dbnldrebrin-like148066611580681155Rat
3313Pgam2phosphoglycerate mutase 2148068179680683907Rat
41205784LOC120096651uncharacterized LOC120096651148068845480691291Rat
1308247PolmDNA polymerase mu148070707580716677Rat
41244728LOC120096652uncharacterized LOC120096652148071719180725962Rat
1306922Aebp1AE binding protein 1148073880080748878Rat
1304954Pold2DNA polymerase delta 2, accessory subunit148074897180755188Rat
11371864LOC108352788uncharacterized LOC108352788148076324380777436Rat
1308262Myl7myosin light chain 7148078068480783259Rat
2670Gckglucokinase148078506080829842Rat
41050910LOC120096653uncharacterized LOC120096653148079579280811073Rat
70897Ykt6YKT6 v-SNARE homolog148083218780843394Rat
2262Camk2bcalcium/calmodulin-dependent protein kinase II beta148084520680934172Rat
11520377LOC108352789uncharacterized LOC108352789148084778780852539Rat
1642416Nudcd3NudC domain containing 3148097541781059183Rat
1303135Npc1l1NPC1 like intracellular cholesterol transporter 1148107144881091113Rat
1597114LOC364192similar to ribosomal protein L13A148109939181100385Rat
1303195Ddx56DEAD-box helicase 56148111200881122395Rat
1306319Tmed4transmembrane p24 trafficking protein 4148112504981129665Rat
11469188LOC108352790ribosome biogenesis protein NSA2 homolog pseudogene148113038781131183Rat
41283680LOC120096751U6 spliceosomal RNA148113267581132780Rat
40974067NEWGENE_40933816transfer RNA valine (anticodon AAC)148113387081133942Rat
1561359Ogdhoxoglutarate dehydrogenase148115002181217479Rat
41003175LOC120096860U4 spliceosomal RNA148118697281187083Rat
1309256Zmiz2zinc finger, MIZ-type containing 2148125139181267936Rat
3372Ppiapeptidylprolyl isomerase A148127929281282960Rat
41036241LOC120096792small Cajal body-specific RNA 16148128506181285200Rat
1587865H2az2H2A.Z variant histone 2148129329981312209Rat
41116037LOC120096654uncharacterized LOC120096654148130338681306222Rat
1559465Purbpurine rich element binding protein B148134237481344857Rat
2322065LOC10036049160S ribosomal protein L13-like148135664481357364Rat
9426172LOC103693157uncharacterized LOC103693157148137565781381037Rat
1306016Myo1gmyosin IG148138670181401843Rat
7606883LOC102547700uncharacterized LOC102547700148140579481408847Rat
41070336LOC120096790small nucleolar RNA SNORA9148140798881408120Rat
1308067Ccm2CCM2 scaffold protein148141841881464114Rat
41068558LOC120096655uncharacterized protein C11orf98 homolog148143572081436342Rat
1559824NacadNAC alpha domain containing148146529981473866Rat
1309737Tbrg4transforming growth factor beta regulator 4148148197781490781Rat
41127835LOC120096784small nucleolar RNA SNORA5148148671881486846Rat
41248356LOC120096786small nucleolar RNA SNORA5148148721881487354Rat
621851Wapwhey acidic protein148150312581505217Rat
61873Ramp3receptor activity modifying protein 3148152740481544905Rat
41390640LOC12009651940S ribosomal protein S19-like148154720481557070Rat
1590593LOC680567similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)148156049281563089Rat
40939875LOC120096856U4 spliceosomal RNA148156919181569303Rat
41369058LOC120096656uncharacterized LOC120096656148156997981575100Rat
1591457Eif6-ps1eukaryotic translation initiation factor 6, pseudogene 1148158411781585052Rat
41381223LOC120096520heat shock protein HSP 90-beta-like148168000481697410Rat
41192253LOC120096657uncharacterized LOC120096657148183277181839913Rat
1309318Adcy1adenylate cyclase 1148191124082020594Rat
40996974LOC120096658uncharacterized LOC120096658148195653581961881Rat
2872Igfbp1insulin-like growth factor binding protein 1148204741582052482Rat
2874Igfbp3insulin-like growth factor binding protein 3148205634782064083Rat
1586609LOC686087similar to motile sperm domain containing 1148228693982289413Rat
2318182LOC100362406mCG51413-like148248730382487888Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10102D14Mco2285147546975275469784Ratregion
10102D14Mco2285147546949375470354Ratregion
10102D14Mco2285147546949375469784Ratregion
10488D14Mgh8116147248920772489324Ratregion
10773D14Mit10260148205747182057735Ratregion
11030D14Mit4139144233688142337007Ratregion
11086D14Mgh1119148068483380684938Ratregion
33818D14Mit9249144187344441873686Ratregion
33989D14Mit13147144782261847822765Ratregion
34045D14Mit8137145276462552764770Ratregion
34102D14Mgh5150144187102241871196Ratregion
34214D14Mgh6145144165819041658327Ratregion
34345D14Mgh2138147351328073513414Ratregion
34616D14Mit16133148082812980828266Ratregion
33692D14Mit12140143766971937669857Ratregion
36287D14Rat12153143915358139153750Ratregion
36299D14Rat20155148120475181204906Ratregion
37230D14Rat64215146361897163619178Ratregion
37328D14Rat61248146448149264481734Ratregion
37426D14Rat62215146381613763816358Ratregion
35202D14Rat24125144246809742468199Ratregion
35319D14Rat16190144226252942262698Ratregion
36864D14Rat28145147262099372621134Ratregion
36998D14Rat17161145491852854918692Ratregion
37044D14Rat86294144940781649408114Ratregion
37098D14Rat26208146502676965026991Ratregion
37624D14Rat68246144104121141041453Ratregion
37638D14Rat46204144673111146731319Ratregion
37638D14Rat46204144579270845792904Ratregion
37788D14Rat37226147580672875806970Ratregion
37798D14Rat48241144378408443784333Ratregion
37828D14Rat39244147250854172508789Ratregion
36512D14Rat18155147995092179951074Ratregion
34931D14Rat19160148068432080684482Ratregion
35713D14Rat11172143905723739057404Ratregion
35723D14Rat25168144079330740793460Ratregion
35723D14Rat25168144079326040793460Ratregion
35765D14Rat29130147252881272528942Ratregion
35837D14Rat27158147558256875582726Ratregion
35939D14Rat15144144127559041275734Ratregion
39774D14Rat89185146829799768298175Ratregion
39806D14Rat100209147259497272595181Ratregion
39826D14Rat85229144518481245185033Ratregion
38212D14Rat57218147892987778930087Ratregion
38214D14Rat59207147510768375107886Ratregion
38232D14Rat56181144162500341625190Ratregion
38238D14Rat58160145798016657980332Ratregion
40392D14Rat107145145741041457410553Ratregion
40396D14Rat108158148060100280601154Ratregion
40134D14Rat91160147812416678124328Ratregion
40342D14Rat92156147913128779131451Ratregion
38984D14Rat31223144047624040476463Ratregion
39064D14Rat35207144682196846822171Ratregion
39088D14Rat63104144180629041806385Ratregion
41986D14Arb10241147341532373415578Ratregion
41988D14Arb11271147248920572489477Ratregion
43018D14Rat140149145970728059707409Ratregion
43019D14Rat120136144442838044428522Ratregion
43021D14Rat122204145812587258126077Ratregion
43023D14Rat124200146030219560302424Ratregion
43024D14Rat125354147020676770207113Ratregion
43025D14Rat126284147192890771929192Ratregion
43026D14Rat127218147442817974428411Ratregion
43027D14Rat144131147766864177668777Ratregion
42392D14Rat135217147255792172558136Ratregion
42393D14Rat136237148148261181482839Ratregion
40852D14Rat90111146875779668757901Ratregion
40864D14Rat93223148086769580867915Ratregion
41050D14Rat87230146235281562353037Ratregion
41866D14Rat119106145676168356761795Ratregion
44552D9Wox21136145112941751129474Ratregion
45178D14Got51264144136664741366913Ratregion
45179D14Got53238144158883841589076Ratregion
45181D14Got50191144204302642043215Ratregion
45182D14Got52157143904498239045139Ratregion
45183D14Got54273143889819738898470Ratregion
45184D14Got55118143848665038486768Ratregion
45188D14Hmgc2232146725085067251079Ratregion
45196D14Got70155147973972379739880Ratregion
60765D14Wox5140143999825139998391Ratregion
60067D14Got48280144285499542855275Ratregion
60068D14Got49165144287387742874042Ratregion
60069D14Got57230143878170238781930Ratregion
60070D14Got58258146530327865303536Ratregion
60071D14Got5994147361846173618555Ratregion
60072D14Got60284147192861371928866Ratregion
60072D14Got60284147192858171928866Ratregion
60073D14Got61100147562240075622500Ratregion
60081D14Got86137144045373140453868Ratregion
625816D14Got56150143889818238898332Ratregion
60065D14Got46179144470466544704844Ratregion
60066D14Got47186144509540245095588Ratregion
62438D14Uia1107147248920472489304Ratregion
62441D14Uia2208146649831666498524Ratregion
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5082217BI2742010147657239776573051Ratregion
5085100Igfbp3182148205647282056654Ratregion
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5085357BQ210040174147503452375034697Ratregion
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5080738RH141753197147815914178159338Ratregion
5080778RH141776191144266318442663375Ratregion
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5090527AU049804160147600892276009082Ratregion
5088665AU048704222144283374542833965Ratregion
5088693AU048721300144469233044692630Ratregion
5088797AU048779236144047624540476483Ratregion
5088849AU048806193147758671177586906Ratregion
5081142RH141989195147121683771217032Ratregion
5081176RH142009211147705139277051870Ratregion
5090049AU049520262147530423575304492Ratregion
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5082681BE119993150147356129673561446Ratregion
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5080948RH141876180144234117842341358Ratregion
5084462AI013730180144111524641115426Ratregion
5084554AI409861154148112521081125358Ratregion
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5086113BM383920196148134905181349247Ratregion
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5083401BF391064152147489207074892222Ratregion
5083491BF391491161148202744982027610Ratregion
5503021Gal3st10147888407978885246Ratregion
5503650UniSTS:465469545145734278857343333Ratregion
5504072px-63c9212143986842239868634Ratregion
5503803UniSTS:471314379148205871282060338Ratregion
5504853ha25651283144385638443857667Ratregion
5505048Dnmt3a127145476956454769691Ratregion
5504967Igfbp1259148204781682049376Ratregion
5505118Cckar990145730056157301551Ratregion
5505446Zmiz2257148126162081261877Ratregion
5505484REN75940251147769746177697712Ratregion
5505877UniSTS:49598570147248998772490057Ratregion
5506027Ptdss2134147798818977988530Ratregion
5506332MARC_49176-49177:1118326844:1485145949569759496182Ratregion
5506384UniSTS:4791091529147996573979967268Ratregion
5506384UniSTS:4791091529147996573979967268Ratregion
5506340UniSTS:478869148147452168674521834Ratregion
5506342UniSTS:478870143147450308074503223Ratregion
5506346UniSTS:478895134147347645373476587Ratregion
5506457RH17231109147995660679956715Ratregion
5506813G45955130147847604678476176Ratregion
5507113UniSTS:224593179147690166976901848Ratregion
5507321G48108118147412771674127831Ratregion
5499507stSG6026120144183496141836169Ratregion
5499507stSG6026120144183490941836169Ratregion
5499527stSG609548100144431497744315817Ratregion
5500288D21S19520147413119174132380Ratregion
5499883UniSTS:235187232144278772142787953Ratregion
5499693Stim1347145687846256878809Ratregion
5499875UniSTS:23516384147735749877357582Ratregion
5499877UniSTS:235167121147504985475049975Ratregion
5499879UniSTS:235168268147428973974290007Ratregion
5499881UniSTS:235180233145687874956878982Ratregion
5500061UniSTS:236495193147852504178525234Ratregion
5502994D5Jcs82143147618816276188305Ratregion
5500605RH136188207146833323968333446Ratregion
5500382GDB:373416118147964580479645922Ratregion
5500491RH126561213147640130976401522Ratregion
5500649RH136456190146833323968333429Ratregion
5500685STS-Z408571551148128435381285904Ratregion
5503424AFMA286ZG11517144374112243742639Ratregion
5503544PPARGC1A__5755891145951564359516534Ratregion
5501169PMC151834P1403144223562742236030Ratregion
5501053PMC129753P2132145729339257293524Ratregion
5501281D12S13291550147566075075661576Ratregion
5501289G06555325147996540579965730Ratregion
5501289G06555325147996540579965730Ratregion
5502098MARC_4333-4334:996679561:1663148139530481395967Ratregion
5502100MARC_4335-4336:996679558:1280148121586481216450Ratregion
5505277BG0743891424148203414482035568Ratregion
5506624SFRS3_1875612147218383672184468Ratregion
5501888MARC_16871-16872:1015445619:10147570866475709293Ratregion
5501938MARC_17835-17836:1025010330:1490144106588241066372Ratregion
5502517RH125184160147350997473510134Ratregion
5502309RH124401150147715501977155169Ratregion
5502709DHX15175145882454258824717Ratregion
5502711FBXL5105146733136367332330Ratregion
5502713PCDH7194145290007052900264Ratregion
5502369RH124640138147267460772674745Ratregion
5502477RH125040122148202820982028331Ratregion
5502581RH125436150147806828378068433Ratregion
Position Markers

Flank 1: (D14Mit12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21437,669,719 - 37,669,857 (+)MAPPER
Rnor_6.01440,315,610 - 40,315,747NCBI
Rnor_5.01440,124,755 - 40,124,892UniSTS
RGSC_v3.41440,156,028 - 40,156,166RGD
RGSC_v3.41440,156,029 - 40,156,166UniSTS
RGSC_v3.11440,158,298 - 40,158,737RGD
Celera1436,881,530 - 36,881,667UniSTS
SHRSP x BN Map1427.1799RGD
SHRSP x BN Map1427.1799UniSTS
Flank 2: (D14Mgh11) No map positions available.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147341532392554092Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147341532392554092Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)148205747195876975Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general lineage: 2 seperate F2 intercrosses were generated one from grandmaternal GK and grandpaternal F344 other from grandmaternal F344 and grandpaternal GK 2312767
qtl_general measurement method: in the last 3 months modified fat-enriched chow was given; animals were killed at 215 days of age; cortical diaphyseal bone was measured and cortical periosteal (in mm) determined by pQCT (peripheral quantitative computed tomography) 2312767
qtl_general software used:one-way ANOVA and MAP MANAGER/QTX 2312767
qtl_general number of animals used: 98 females 2312767