BE119677 Marker Search Result - Rat Genome Database

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Marker: BE119677

Symbol: BE119677
Previously known as:
RGD ID: 5082545
Expected Size: 141 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21494,997,209 - 94,997,350 (+)MAPPERmRatBN7.2
Rnor_6.014105,048,134 - 105,048,274NCBIRnor6.0
Rnor_5.014104,777,309 - 104,777,449UniSTSRnor5.0
RGSC_v3.414101,621,078 - 101,621,218UniSTSRGSC3.4
Celera1494,011,817 - 94,011,957UniSTS
RH 3.4 Map14748.4UniSTS
Cytogenetic Map14q22UniSTS
Is Marker For: Genes:   Lgalsl  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer ATGCACATGGATTTGCCATTTA
Reverse Primer TGGGCTATCCCAGAACTGTCTT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1307414Lgalslgalectin-like149499699195004499Rat

RefSeq Transcripts NM_001134730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC168193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 15 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)149255388695876975Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat

1 to 10 of 15 rows


Database
Acc Id
Source(s)
NCBI Gene 360983 UniSTS