Gene: Nipsnap1 (nipsnap homolog 1) Rattus norvegicus
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Symbol: Nipsnap1
Name: nipsnap homolog 1
Description: ENCODES a protein that exhibits neurotransmitter binding (ortholog); INVOLVED IN sensory perception of pain (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); synaptic membrane (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene
AGR Description: Predicted to have neurotransmitter binding activity; predicted to be involved in sensory perception of pain; predicted to localize to the mitochondrion and synaptic membrane; orthologous to human NIPSNAP1 (nipsnap homolog 1).
Merged Description: Predicted to have neurotransmitter binding activity; predicted to be involved in sensory perception of pain; predicted to localize to the mitochondrion and synaptic membrane; orthologous to human NIPSNAP1 (nipsnap homolog 1); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1; 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans); LOC360971; nipsnap homolog 1 (C. elegans)
Orthologs:
Homo sapiens (human) : NIPSNAP1 (nipsnap homolog 1)  HGNC  Alliance
Mus musculus (house mouse) : Nipsnap1 (nipsnap homolog 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nipsnap1 (nipsnap homolog 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NIPSNAP1 (nipsnap homolog 1)
Canis lupus familiaris (dog) : NIPSNAP1 (nipsnap homolog 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nipsnap1 (nipsnap homolog 1)
Sus scrofa (pig) : THOC5 (THO complex 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01485,113,578 - 85,137,457 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01485,791,355 - 85,815,292 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41485,532,437 - 85,556,559 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11485,551,597 - 85,575,704 (+)NCBI
Celera1478,638,919 - 78,662,697 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nipsnap1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310419
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.