Zmiz2 (zinc finger, MIZ-type containing 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Zmiz2 (zinc finger, MIZ-type containing 2) Rattus norvegicus
Analyze
Symbol: Zmiz2
Name: zinc finger, MIZ-type containing 2
RGD ID: 1309256
Description: Predicted to enable SUMO ligase activity and nuclear receptor coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II and protein sumoylation. Predicted to be located in mitochondrion; nuclear replication fork; and nucleoplasm. Orthologous to human ZMIZ2 (zinc finger MIZ-type containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; amphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103693776; LOC289783; RGD1309256; similar to D11Bwg0280e protein; zinc finger MIZ domain-containing protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21481,251,391 - 81,267,936 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1481,251,417 - 81,267,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1485,652,495 - 85,668,992 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01486,892,295 - 86,908,792 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01483,341,895 - 83,358,392 (+)NCBIRnor_WKY
Rnor_6.01486,645,875 - 86,662,419 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,514,214 - 86,530,701 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,652,365 - 86,661,441 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01487,476,042 - 87,492,529 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,137,696 - 87,154,183 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11487,157,091 - 87,173,412 (+)NCBI
Celera1480,133,186 - 80,149,673 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:16051670   PMID:16777850  


Genomics

Comparative Map Data
Zmiz2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21481,251,391 - 81,267,936 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1481,251,417 - 81,267,936 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1485,652,495 - 85,668,992 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01486,892,295 - 86,908,792 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01483,341,895 - 83,358,392 (+)NCBIRnor_WKY
Rnor_6.01486,645,875 - 86,662,419 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,514,214 - 86,530,701 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1486,652,365 - 86,661,441 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01487,476,042 - 87,492,529 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41487,137,696 - 87,154,183 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11487,157,091 - 87,173,412 (+)NCBI
Celera1480,133,186 - 80,149,673 (+)NCBICelera
Cytogenetic Map14q21NCBI
ZMIZ2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38744,748,571 - 44,769,881 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl744,748,581 - 44,769,881 (+)EnsemblGRCh38hg38GRCh38
GRCh37744,788,170 - 44,809,480 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36744,755,055 - 44,776,005 (+)NCBINCBI36Build 36hg18NCBI36
Celera744,887,383 - 44,908,331 (+)NCBICelera
Cytogenetic Map7p13NCBI
HuRef744,673,730 - 44,694,595 (+)NCBIHuRef
CHM1_1744,792,833 - 44,813,823 (+)NCBICHM1_1
T2T-CHM13v2.0744,909,114 - 44,930,427 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2744,828,066 - 44,849,014 (+)NCBI
Zmiz2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39116,339,063 - 6,356,162 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl116,339,074 - 6,356,158 (+)EnsemblGRCm39 Ensembl
GRCm38116,388,799 - 6,406,162 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl116,389,074 - 6,406,158 (+)EnsemblGRCm38mm10GRCm38
MGSCv37116,289,367 - 6,306,165 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36116,289,367 - 6,306,165 (+)NCBIMGSCv36mm8
Celera116,872,938 - 6,889,871 (+)NCBICelera
Cytogenetic Map11A1NCBI
cM Map113.95NCBI
Zmiz2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554567,387,346 - 7,407,807 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554567,393,675 - 7,407,710 (-)NCBIChiLan1.0ChiLan1.0
ZMIZ2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1745,532,293 - 45,552,081 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl745,532,224 - 45,552,081 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0745,462,031 - 45,482,209 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ZMIZ2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha162,444,231 - 2,458,717 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01614,402,814 - 14,417,299 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1614,385,970 - 14,411,523 (-)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.01614,035,837 - 14,050,313 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01614,014,938 - 14,029,426 (-)NCBIUU_Cfam_GSD_1.0
Zmiz2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118100,405,085 - 100,426,227 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647819,616,849 - 19,638,125 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493647819,616,850 - 19,637,958 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZMIZ2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1850,579,655 - 50,598,562 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11850,579,650 - 50,598,921 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21855,408,742 - 55,415,277 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZMIZ2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12113,909,414 - 13,929,952 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2113,906,146 - 13,929,910 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660628,606,652 - 8,628,367 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zmiz2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247407,458,535 - 7,473,252 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247407,458,656 - 7,473,316 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zmiz2
42 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:131
Count of miRNA genes:108
Interacting mature miRNAs:114
Transcripts:ENSRNOT00000052002
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147341532392554092Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147341532392554092Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat

Markers in Region
RH131314  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21481,267,327 - 81,267,544 (+)MAPPERmRatBN7.2
Rnor_6.01486,661,811 - 86,662,027NCBIRnor6.0
Rnor_6.01486,530,093 - 86,530,309NCBIRnor6.0
Rnor_5.01487,491,921 - 87,492,137UniSTSRnor5.0
RGSC_v3.41487,153,575 - 87,153,791UniSTSRGSC3.4
Celera1480,149,065 - 80,149,281UniSTS
RH 3.4 Map14577.4UniSTS
Cytogenetic Map14q21UniSTS
Zmiz2  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21481,261,620 - 81,261,877 (+)MAPPERmRatBN7.2
Rnor_6.01486,656,104 - 86,656,360NCBIRnor6.0
Rnor_6.01486,524,386 - 86,524,642NCBIRnor6.0
Rnor_5.01487,486,214 - 87,486,470UniSTSRnor5.0
RGSC_v3.41487,147,868 - 87,148,124UniSTSRGSC3.4
Celera1480,143,358 - 80,143,614UniSTS
Cytogenetic Map14q21UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 2 2 2 2 3 2 66 24 31 3
Low 1 41 54 38 16 38 8 11 8 11 10 8 8
Below cutoff 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001100507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006251440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC106663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW528357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK364743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK473991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV111150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DY312973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000052002   ⟹   ENSRNOP00000042684
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1481,251,449 - 81,267,936 (+)Ensembl
Rnor_6.0 Ensembl1486,514,214 - 86,530,701 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000077428   ⟹   ENSRNOP00000069227
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1481,251,449 - 81,267,936 (+)Ensembl
Rnor_6.0 Ensembl1486,652,365 - 86,661,441 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000108819   ⟹   ENSRNOP00000081352
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1481,251,417 - 81,267,566 (+)Ensembl
RefSeq Acc Id: NM_001100507   ⟹   NP_001093977
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,449 - 81,267,936 (+)NCBI
Rnor_6.01486,645,932 - 86,662,419 (+)NCBI
Rnor_5.01487,476,042 - 87,492,529 (+)NCBI
RGSC_v3.41487,137,696 - 87,154,183 (+)RGD
Celera1480,133,186 - 80,149,673 (+)RGD
Sequence:
RefSeq Acc Id: XM_006251440   ⟹   XP_006251502
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
Rnor_6.01486,646,248 - 86,662,419 (+)NCBI
Rnor_5.01487,476,042 - 87,492,529 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770269   ⟹   XP_008768491
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
Rnor_6.01486,646,248 - 86,662,419 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017599125   ⟹   XP_017454614
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
Rnor_6.01486,646,248 - 86,662,419 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039091751   ⟹   XP_038947679
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,391 - 81,267,936 (+)NCBI
RefSeq Acc Id: XM_039091752   ⟹   XP_038947680
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,909 - 81,267,936 (+)NCBI
RefSeq Acc Id: XM_039091753   ⟹   XP_038947681
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
RefSeq Acc Id: XM_039091754   ⟹   XP_038947682
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,258,249 - 81,267,936 (+)NCBI
RefSeq Acc Id: XM_039091755   ⟹   XP_038947683
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
RefSeq Acc Id: XM_039091756   ⟹   XP_038947684
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21481,251,773 - 81,267,936 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_001093977   ⟸   NM_001100507
- UniProtKB: G3V9C9 (UniProtKB/TrEMBL),   Q68FR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251502   ⟸   XM_006251440
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008768491   ⟸   XM_008770269
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017454614   ⟸   XM_017599125
- Peptide Label: isoform X2
- UniProtKB: A0A0G2JUU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000069227   ⟸   ENSRNOT00000077428
RefSeq Acc Id: XP_038947679   ⟸   XM_039091751
- Peptide Label: isoform X1
- UniProtKB: G3V9C9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947681   ⟸   XM_039091753
- Peptide Label: isoform X1
- UniProtKB: G3V9C9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947684   ⟸   XM_039091756
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038947683   ⟸   XM_039091755
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038947680   ⟸   XM_039091752
- Peptide Label: isoform X1
- UniProtKB: G3V9C9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947682   ⟸   XM_039091754
- Peptide Label: isoform X5
RefSeq Acc Id: ENSRNOP00000042684   ⟸   ENSRNOT00000052002
RefSeq Acc Id: ENSRNOP00000081352   ⟸   ENSRNOT00000108819
Protein Domains
SP-RING-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V9C9-F1-model_v2 AlphaFold G3V9C9 1-920 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309256 AgrOrtholog
BioCyc Gene G2FUF-15092 BioCyc
Ensembl Genes ENSRNOG00000025923 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000054513 Ensembl
Ensembl Protein ENSRNOP00000042684 ENTREZGENE
  ENSRNOP00000042684.3 UniProtKB/TrEMBL
  ENSRNOP00000069227 ENTREZGENE
  ENSRNOP00000069227.2 UniProtKB/TrEMBL
  ENSRNOP00000081352 ENTREZGENE
  ENSRNOP00000081352.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000052002 ENTREZGENE
  ENSRNOT00000052002.5 UniProtKB/TrEMBL
  ENSRNOT00000077428 ENTREZGENE
  ENSRNOT00000077428.2 UniProtKB/TrEMBL
  ENSRNOT00000108819 ENTREZGENE
  ENSRNOT00000108819.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7112762 IMAGE-MGC_LOAD
  IMAGE:7383537 IMAGE-MGC_LOAD
InterPro Znf_MIZ UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report rno:289783 UniProtKB/TrEMBL
MGC_CLONE MGC:116364 IMAGE-MGC_LOAD
  MGC:94934 IMAGE-MGC_LOAD
NCBI Gene 289783 ENTREZGENE
Pfam zf-MIZ UniProtKB/TrEMBL
PhenoGen Zmiz2 PhenoGen
PROSITE ZF_SP_RING UniProtKB/TrEMBL
UniProt A0A0G2JUU0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZRF9_RAT UniProtKB/TrEMBL
  G3V9C9 ENTREZGENE, UniProtKB/TrEMBL
  Q4FZS4_RAT UniProtKB/TrEMBL
  Q68FR4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Zmiz2  zinc finger, MIZ-type containing 2  LOC103693776  zinc finger MIZ domain-containing protein 2  Data Merged 737654 PROVISIONAL
2014-08-25 LOC103693776  zinc finger MIZ domain-containing protein 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-12-06 RGD1309256  similar to D11Bwg0280e protein  RGD1309256_predicted  similar to D11Bwg0280e protein (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1309256_predicted  similar to D11Bwg0280e protein (predicted)  LOC289783_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC289783_predicted  similar to D11Bwg0280e protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL