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CLINICAL MEASUREMENT - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:serum total cholesterol level
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Accession:CMO:0000363 term browser browse the term
Definition:Measurement of the entire amount of cholesterol, a eukaryotic sterol that in higher animals is the precursor of bile acids and steroid hormones and a key constituent of cell membranes, without taking into account any association with other molecules such as lipoproteins, in a specified volume of serum, the clear liquid that separates from blood after it has clotted completely, i.e. blood plasma from which fibrinogen has been removed.
Synonyms:related_synonym: serum TC level


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serum total cholesterol level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl1 Serum cholesterol level QTL 1 IDA RGD PMID:10634822 RGD:61092 NCBI chr15:18,513,913...88,036,354 JBrowse link
Q Scl2 Serum cholesterol level QTL 2 IDA RGD PMID:10634822 RGD:61092 NCBI chr 5:61,086,525...149,030,144 JBrowse link
Q Scl22 Serum cholesterol level QTL 22 IDA RGD PMID:9199194 RGD:61055 NCBI chr18:15,532,963...32,704,022 JBrowse link
Q Scl25 Serum cholesterol level QTL 25 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:99,983,293...127,203,999 JBrowse link
Q Scl26 Serum cholesterol level QTL 26 IDA RGD PMID:11721057 RGD:70849 NCBI chr 5:44,404,276...89,432,042 JBrowse link
Q Scl29 Serum cholesterol level QTL 29 IDA RGD PMID:14724732 RGD:737686 NCBI chr 6:37,608,980...75,023,446 JBrowse link
Q Scl3 Serum cholesterol level QTL 3 IDA RGD PMID:10634822 RGD:61092 NCBI chr 7:53,200,344...98,200,344 JBrowse link
Q Scl4 Serum cholesterol level QTL 4 IDA RGD PMID:9633608 RGD:619667 NCBI chr 4:94,414,208...139,414,208 JBrowse link
Q Scl44 Serum cholesterol level QTL 44 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 5:40,777,918...154,732,375 JBrowse link
Q Scl45 Serum cholesterol level QTL 45 IDA RGD PMID:16061941 RGD:1547851 NCBI chr14:51,818,462...105,074,364 JBrowse link
Q Scl46 Serum cholesterol level QTL 46 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 4:131,864,442...176,864,442 JBrowse link
Q Scl47 Serum cholesterol level QTL 47 IDA RGD PMID:16061941 RGD:1547851 NCBI chr10:53,104,718...98,104,718 JBrowse link
Q Scl48 Serum cholesterol level QTL 48 IDA RGD PMID:16061941 RGD:1547851 NCBI chr12:15,021,986...52,716,770 JBrowse link
Q Scl5 Serum cholesterol level QTL 5 IDA RGD PMID:9633608 RGD:619667 NCBI chr 1:258,132,568...282,763,074 JBrowse link
Q Scl59 Serum cholesterol level QTL 59 IDA RGD PMID:18753676 RGD:2300117 NCBI chr14:78,446,303...110,402,569 JBrowse link
Q Scl6 Serum cholesterol level QTL 6 IDA RGD PMID:12482837 RGD:629577 NCBI chr 1:67,227,683...94,201,552 JBrowse link
Q Scl60 Serum cholesterol level QTL 60 IDA RGD PMID:10720472 RGD:619689 NCBI chr 5:149,568,588...167,739,697 JBrowse link
Q Scl62 Serum cholesterol level QTL 62 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:1...39,773,425 JBrowse link
Q Scl63 Serum cholesterol level QTL 63 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:103,141,814...176,418,101 JBrowse link
Q Scl64 Serum cholesterol level QTL 64 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 5:71,154,828...108,092,802 JBrowse link
Q Scl65 Serum cholesterol level QTL 65 IDA RGD PMID:19584880 RGD:2312642 NCBI chr10:60,875,260...105,875,260 JBrowse link
Q Scl7 Serum cholesterol level QTL 7 IDA RGD PMID:12482837 RGD:629577 NCBI chr 7:45,301,573...90,301,573 JBrowse link
Q Scl8 Serum cholesterol level QTL8 IDA RGD PMID:12482837 RGD:629577 NCBI chr 2:231,621,666...266,435,125 JBrowse link
Q Scl9 Serum cholesterol level QTL 9 IDA RGD PMID:12482837 RGD:629577 NCBI chr16:17,309,396...22,744,540 JBrowse link

Related Phenotype Data for Term "serum total cholesterol level" (CMO:0000363)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Term paths to the root
Path 1
Term Annotations click to browse term
  clinical measurement 2369
    blood measurement 439
      blood chemistry measurement 426
        blood protein measurement 188
          blood lipoprotein measurement 70
            blood lipoprotein level 70
              blood total cholesterol level 45
                serum total cholesterol level 24
                  serum high density lipoprotein cholesterol level to serum total cholesterol level ratio 0
paths to the root