Gene: Clrn2 (clarin 2) Rattus norvegicus
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Symbol: Clrn2
Name: clarin 2
Description: FOUND IN integral component of membrane (inferred); INTERACTS WITH bisphenol A; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog); 2,2',5,5'-tetrachlorobiphenyl (ortholog)
Type: protein-coding
RefSeq Status: INFERRED
Also known as: clarin-2; LOC689515; similar to Usher syndrome type III A
Orthologs:
Homo sapiens (human) : CLRN2 (clarin 2)  HGNC  Alliance
Mus musculus (house mouse) : Clrn2 (clarin 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clrn2 (clarin 2)
Pan paniscus (bonobo/pygmy chimpanzee) : CLRN2 (clarin 2)
Canis lupus familiaris (dog) : CLRN2 (clarin 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clrn2 (clarin 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01470,150,983 - 70,160,624 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01470,194,126 - 70,203,808 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41470,728,250 - 70,737,940 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1464,637,652 - 64,647,294 (-)NCBICelera
Cytogenetic Map14q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clrn2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1591112
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE