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Gene: Sh3tc1 (SH3 domain and tetratricopeptide repeats 1) Rattus norvegicus
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Symbol: Sh3tc1
Name: SH3 domain and tetratricopeptide repeats 1
Description: Orthologous to human SH3TC1 (SH3 domain and tetratricopeptide repeats 1); INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305441; SH3 domain and tetratricopeptide repeat-containing protein 1; SH3 domain and tetratricopeptide repeats-containing protein 1
Orthologs:
Homo sapiens (human) : SH3TC1 (SH3 domain and tetratricopeptide repeats 1)  HGNC  Alliance
Mus musculus (house mouse) : Sh3tc1 (SH3 domain and tetratricopeptide repeats 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sh3tc1 (SH3 domain and tetratricopeptide repeats 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SH3TC1 (SH3 domain and tetratricopeptide repeats 1)
Canis lupus familiaris (dog) : SH3TC1 (SH3 domain and tetratricopeptide repeats 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sh3tc1 (SH3 domain and tetratricopeptide repeats 1)
Sus scrofa (pig) : SH3TC1 (SH3 domain and tetratricopeptide repeats 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01480,184,814 - 80,229,207 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1480,195,715 - 80,229,214 (+)Ensembl
Rnor_5.01479,814,440 - 79,857,498 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41480,654,810 - 80,683,690 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11480,657,247 - 80,694,342 (+)NCBI
Celera1473,953,051 - 73,981,437 (+)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sh3tc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305610
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.