Gluco29 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco29 (Glucose level QTL 29) Rattus norvegicus

Symbol: Gluco29
Name: Glucose level QTL 29
RGD ID: 1582255
Previously known as: Delta AUC (dex-sucr)
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: absolute change in blood glucose level area under curve   (CMO:0002034)    
LOD Score: 3.1
P Value: 0.0025
Variance: 14.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21473,415,323 - 92,554,092RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01478,172,765 - 102,549,388RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01478,146,760 - 102,294,177RGDRnor5.0
RGSC_v3.41478,978,644 - 99,080,020RGDRGSC3.4
RGSC_v3.11454,099,165 - 99,099,165RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2494Ddcdopa decarboxylase148637868586469189Rat
2058Adra2cadrenoceptor alpha 2C147547114375472846Rat
3583Rnf4ring finger protein 4147640129276423270Rat
3978Ywhahtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta147769633277705715Rat
619959Afap1actin filament associated protein 1147474332274856295Rat
2262Camk2bcalcium/calmodulin-dependent protein kinase II beta148084520680934172Rat
61858Grk4G protein-coupled receptor kinase 4147599855476080808Rat
3313Pgam2phosphoglycerate mutase 2148068179680683907Rat
70909HgfacHGF activator147570758875714182Rat
70941Dbnldrebrin-like148066611580681155Rat
2874Igfbp3insulin-like growth factor binding protein 3148205634782064083Rat
3169Nf2NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor147962739979710709Rat
2064Ap1b1adaptor related protein complex 1 subunit beta 1147987948279930778Rat
61873Ramp3receptor activity modifying protein 3148152740481544905Rat
70897Ykt6YKT6 v-SNARE homolog148083218780843394Rat
3713Slc5a1solute carrier family 5 member 1147755399077618589Rat
62056Limk2LIM domain kinase 2147820818278286106Rat
3564Rgs12regulator of G-protein signaling 12147571592575824012Rat
70947Grpel1GrpE-like 1, mitochondrial147429202374298243Rat
620681Tcn2transcobalamin 2147881334378828549Rat
68337Htthuntingtin147584583675996094Rat
621851Wapwhey acidic protein148150312581505217Rat
620541Inpp5jinositol polyphosphate-5-phosphatase J147837416178385305Rat
620700Lrpap1LDL receptor related protein associated protein 1147565137175663380Rat
708584Spon2spondin 2147750569577518001Rat
708484Slc35e4solute carrier family 35, member E4147880332078810186Rat
2670Gckglucokinase148078506080829842Rat
69230Ppp3r1protein phosphatase 3, regulatory subunit B, alpha149155674391606230Rat
69245Acox3acyl-CoA oxidase 3, pristanoyl147513398675176767Rat
3159Nefhneurofilament heavy chain147983036279840347Rat
620789Kremen1kringle containing transmembrane protein 1148008187080147489Rat
620714Fgfr3fibroblast growth factor receptor 3147698724277002671Rat
3372Ppiapeptidylprolyl isomerase A148127929281282960Rat
1303073Xbp1X-box binding protein 1148039062980395713Rat
1303135Npc1l1NPC1 like intracellular cholesterol transporter 1148107144881091113Rat
1304928Hmx1H6 family homeobox 1147536120775364993Rat
2441Ctbp1C-terminal binding protein 1147745558077482821Rat
1302948Tacc3transforming, acidic coiled-coil containing protein 3147705120977065343Rat
1304954Pold2DNA polymerase delta 2, accessory subunit148074897180755188Rat
735187Ankrd36ankyrin repeat domain 36148045169980568458Rat
620812Sec14l3SEC14-like lipid binding 3147894456878955608Rat
735186EvcEvC ciliary complex subunit 1147345618173498955Rat
2543Egfrepidermal growth factor receptor149117693191349722Rat
620865LifLIF, interleukin 6 family cytokine147913104979140486Rat
621779Sec14l2SEC14-like lipid binding 2147897380578998480Rat
620496Cpzcarboxypeptidase Z147522369275246946Rat
1306319Tmed4transmembrane p24 trafficking protein 4148112504981129665Rat
620920Ppp2r2cprotein phosphatase 2, regulatory subunit B, gamma147384654773931178Rat
1305153Ccdc96coiled-coil domain containing 96147427656874279072Rat
1306014Mrps24mitochondrial ribosomal protein S24148058467180588801Rat
1306016Myo1gmyosin IG148138670181401843Rat
1305556Nelfanegative elongation factor complex member A147680892076832998Rat
1306922Aebp1AE binding protein 1148073880080748878Rat
1304991Thoc5THO complex subunit 5147975880579792718Rat
1306371UvssaUV-stimulated scaffold protein A147730918877351922Rat
1305093Mxd4Max dimerization protein 4147656210576576224Rat
1304993Drg1developmentally regulated GTP binding protein 1147810387678119976Rat
1306037Bloc1s4biogenesis of lysosomal organelles complex 1 subunit 4147404302574044325Rat
1305566Upp1uridine phosphorylase 1148380949583829299Rat
1305469Prr14lproline rich 14-like147786984877937141Rat
1305719Nat8lN-acetyltransferase 8-like147675607776762712Rat
1307955Nsd2nuclear receptor binding SET domain protein 2147683319476911304Rat
1307258Ewsr1EWS RNA-binding protein 1147996536579994108Rat
1304774Castor1cytosolic arginine sensor for mTORC1 subunit 1147908613679090549Rat
2041Add1adducin 1147610864376167267Rat
1307368Psapl1prosaposin-like 1147454464674547206Rat
727882Pno1partner of NOB1 homolog149160971191618280Rat
1305895Abca13ATP binding cassette subfamily A member 13148387339784376138Rat
1306100Rasl10aRAS-like, family 10, member A147995509379956471Rat
2407Crmp1collapsin response mediator protein 1147350993373556192Rat
1305605Nop14NOP14 nucleolar protein147608131876102454Rat
1305610Sh3tc1SH3 domain and tetratricopeptide repeats 1147500569175050001Rat
1310417Evc2EvC ciliary complex subunit 2147336683273454539Rat
1309737Tbrg4transforming growth factor beta regulator 4148148197781490781Rat
1308247PolmDNA polymerase mu148070707580716677Rat
1303094Ablim2actin binding LIM protein family, member 2147486540974990334Rat
1309318Adcy1adenylate cyclase 1148191124082020594Rat
1310505Osbp2oxysterol binding protein 2147858508878746785Rat
1559814Pes1pescadillo ribosomal biogenesis factor 1147885075478867134Rat
1308380Trmt44tRNA methyltransferase 44147517533175204291Rat
1309877Maeamacrophage erythroblast attacher, E3 ubiquitin ligase147735726177390683Rat
1310828Tmem129transmembrane protein 129, E3 ubiquitin ligase147706539177070871Rat
1311535Depdc5DEP domain containing 5, GATOR1 subcomplex subunit147773229777862924Rat
1310419Nipsnap1nipsnap homolog 1147973423479758101Rat
1310842Morc2MORC family CW-type zinc finger 2147852960378571375Rat
1311641Tbc1d10aTBC1 domain family, member 10a147905182279083603Rat
1303195Ddx56DEAD-box helicase 56148111200881122395Rat
1312002Coblcordon-bleu WH2 repeat protein148682813787060682Rat
1310738Rnf215ring finger protein 215147900665979013091Rat
1560394RGD1560394RGD1560394147676814576769774Rat
1308373Cnrip1cannabinoid receptor interacting protein 1149146304691492736Rat
1310972Mtmr3myotubularin related protein 3147934052379460947Rat
1309634Fam193afamily with sequence similarity 193, member A147625010376382525Rat
1310621Sorcs2sortilin-related VPS10 domain containing receptor 2147437108974735943Rat
1309993Tbc1d14TBC1 domain family, member 14147417265274272182Rat
1310151Zfyve28zinc finger FYVE-type containing 28147646842476554039Rat
1310216Smtnsmoothelin147839859578420908Rat
1309256Zmiz2zinc finger, MIZ-type containing 2148125139181267936Rat
1306929Dusp18dual specificity phosphatase 18147879018378811576Rat
1308262Myl7myosin light chain 7148078068480783259Rat
1307112Fignl1fidgetin-like 1148636867086381728Rat
1305323Pla2g3phospholipase A2, group III147836762578373913Rat
1308337Patz1POZ (BTB) and AT hook containing zinc finger 1147815459078173032Rat
1308269Plekpleckstrin149139701591429693Rat
1308840Man2b2mannosidase, alpha, class 2B, member 2147396907973994089Rat
1309870Spata48spermatogenesis associated 48148603057786085644Rat
1307717Tnip2TNFAIP3 interacting protein 2147622828376246609Rat
1308775C14h5orf52similar to human chromosome 5 open reading frame 52147878131578789956Rat
1310588Sh3bp2SH3-domain binding protein 2147617609776213331Rat
1308067Ccm2CCM2 scaffold protein148141841881464114Rat
1359678Letm1leucine zipper and EF-hand containing transmembrane protein 1147694264776982220Rat
1564681Urgcpupregulator of cell proliferation148059463780638972Rat
1564874Nkx1-1NK1 homeobox 1147729667677300575Rat
1559824NacadNAC alpha domain containing148146529981473866Rat
1560908Eif4enif1eukaryotic translation initiation factor 4E nuclear import factor 1147805611578099846Rat
1561762Ccdc117coiled-coil domain containing 117148039923680409824Rat
1566416Dok7docking protein 7147566544475699413Rat
1561359Ogdhoxoglutarate dehydrogenase148115002181217479Rat
1311203Pik3ip1phosphoinositide-3-kinase interacting protein 1147820353978216616Rat
1565037Selenomselenoprotein M147839582678398429Rat
1311206Gas2l1growth arrest-specific 2 like 1147995170279961830Rat
1563315Fam53afamily with sequence similarity 53, member A147708817877124395Rat
1563985Zpbpzona pellucida binding protein148583097186030778Rat
1563337LOC498414LRRGT00197148530726085349430Rat
1562401Jakmip1janus kinase and microtubule interacting protein 1147364736673766830Rat
1563863Dnaaf10dynein axonemal assembly factor 10149161864991639828Rat
1308120Htra3HtrA serine peptidase 3147506891775097315Rat
1559465Purbpurine rich element binding protein B148134237481344857Rat
1561422Ascc2activating signal cointegrator 1 complex subunit 2147950344979547801Rat
1560636Sfi1SFI1 centrin binding protein147799096578048352Rat
1559774Zmat5zinc finger, matrin type 5147956864479599595Rat
628631Mrfap1Morf4 family associated protein 1147400251274004289Rat
1564174Tns3tensin 3148317364983405671Rat
1359269Cabp7calcium binding protein 7147959882279609172Rat
1311477Sf3a1splicing factor 3A subunit 1147903139479052144Rat
1309073Fbxo48F-box protein 48149138085791382314Rat
1311827Rhbdd3rhomboid domain containing 3147999411180000294Rat
1311900Mfsd10major facilitator superfamily domain containing 10147610376276107385Rat
1584653Ccdc157coiled-coil domain containing 157147901243379031458Rat
1566234Grb10growth factor receptor bound protein 10148649505486602815Rat
68954Wfs1wolframin ER transmembrane glycoprotein147381047873834993Rat
1587626LOC688553hypothetical protein LOC688553148374847883768293Rat
1565447Hormad2HORMA domain containing 2147921501379300447Rat
2872Igfbp1insulin-like growth factor binding protein 1148204741582052482Rat
1586609LOC686087similar to motile sperm domain containing 1148228693982289413Rat
1564724Pkd1l1polycystin 1 like 1, transient receptor potential channel interacting148355296483670062Rat
1562979Ikzf1IKAROS family zinc finger 1148625506586340839Rat
1561605Tada2btranscriptional adaptor 2B147427928674290758Rat
1565796Msantd1Myb/SANT DNA binding domain containing 1147583236875845687Rat
1565810Sec14l4SEC14-like lipid binding 4147891275078928799Rat
1564567Cfap99cilia and flagella associated protein 99147642392376468170Rat
1564777Rnf185ring finger protein 185147829251778329832Rat
1560957Etaa1l1Ewing tumor-associated antigen 1-like 1149229846192314044Rat
1560600C1dC1D nuclear receptor corepressor149166095191673177Rat
1563894Morf4l1-ps5mortality factor 4 like 1, pseudogene 5148495712984958164Rat
1582940Srbd1-ps1S1 RNA binding domain 1, pseudogene 1148786397287874151Rat
1359705Mtfp1mitochondrial fission process 1147896843478972274Rat
1561286Gapdh-ps102Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 102148800930188010396Rat
1589624Vwc2von Willebrand factor C domain containing 2148568367085825068Rat
1593771Znrf3zinc and ring finger 3148015785480313456Rat
1591358LOC685655similar to CG7638-PA148399138583992860Rat
1591457Eif6-ps1eukaryotic translation initiation factor 6, pseudogene 1148158411781585052Rat
1587865H2az2H2A.Z variant histone 2148129329981312209Rat
1590593Ldha-ps24lactate dehydrogenase A, pseudogene 24148156049281563089Rat
1584682Slbpstem-loop binding protein147707144177081911Rat
1585012Osmoncostatin M147910363879108500Rat
1583379Gal3st1galactose-3-O-sulfotransferase 1147886804978886402Rat
1588187Snrpg-ps1small nuclear ribonucleoprotein polypeptide G, pseudogene 1147806813678068530Rat
1595126Uqcr10ubiquinol-cytochrome c reductase, complex III subunit X147956615179569017Rat
1596197Vstm2aV-set and transmembrane domain containing 2A149066001290897561Rat
1596170Sec61gSec61 translocon subunit gamma149089976690906143Rat
1592623Frg2FSHD region gene 2148042726080429560Rat
1591723Haus3HAUS augmin-like complex, subunit 3147658054976599542Rat
1596848LOC680039hypothetical protein LOC680039147409442174159316Rat
1591975Sun3Sad1 and UNC84 domain containing 3148371013683748982Rat
1591976Hus1HUS1 checkpoint clamp component148368870283703466Rat
1593795Emid1EMI domain containing 1148000048680043561Rat
1596729Pisdphosphatidylserine decarboxylase147794192777991021Rat
1597113Pgm1-ps1phosphoglucomutase 1, pseudogene 1148609106086093503Rat
1597114Rpl13a-ps10ribosomal protein L13A, pseudogene 10148109939181100385Rat
1597115Kansl2-ps4KAT8 regulatory NSL complex subunit 2, pseudogene 4148053832180540654Rat
1597116Psmb3-ps5proteasome 20S subunit beta 3, pseudogene 5147715196677153837Rat
1642416Nudcd3NudC domain containing 3148097541781059183Rat
2319299LOC100361879ATP synthase subunit epsilon, mitochondrial-like147786348077864135Rat
2318741Ube2v1-ps2ubiquitin conjugating enzyme E2 V1, pseudogene 2147561744175619176Rat
2318182Apoo-ps3apolipoprotein O, pseudogene 3148248730382487888Rat
2322065LOC10036049160S ribosomal protein L13-like148135664481357364Rat
2320735Pom121l12POM121 transmembrane nucleoporin-like 12148910851289109604Rat
2320935LOC100361025protein arginine methyltransferase 1-like148755116587552305Rat
2323208Hnrnpk-ps1heterogeneous nuclear ribonucleoprotein K, pseudogene 1149175662891758358Rat
2323351LOC100363290hypothetical protein LOC100363290149164310891646555Rat
2323556Rnf115-ps1ring finger protein 115, pseudogene 1148932518989326067Rat
2323894Glo1-ps2glyoxalase 1, pseudogene 2148903118089037851Rat
6499571Pfdn4-ps1prefoldin subunit 4, pseudogene 1147846415878464609Rat
7502494LOC102553003uncharacterized LOC102553003148692803886948136Rat
7662247LOC102552528uncharacterized LOC102552528148577231185787440Rat
7635591Selenok-ps3selenoprotein K, pseudogene 3147420420174204999Rat
7636041LOC102557304uncharacterized LOC102557304148340604283408938Rat
7574864Rpl18-ps8ribosomal protein L18, pseudogene 8148056501680565530Rat
7642008LOC102556795uncharacterized LOC102556795147875798478770849Rat
7596857C14h4orf50similar to human chromosome 4 open reading frame 50147356120973646151Rat
7565325LOC102556834uncharacterized LOC102556834147582645175831905Rat
7606883LOC102547700uncharacterized LOC102547700148140579481408847Rat
7704064LOC102549281uncharacterized LOC102549281147897362678990088Rat
7731769LOC102553529uncharacterized LOC102553529148848792688503110Rat
7740095Rpl7-ps1ribosomal protein L7, pseudogene 1147825252078253445Rat
7743232LOC102552764uncharacterized LOC102552764148661986086627072Rat
7673923LOC102549967uncharacterized LOC102549967148036874480377124Rat
7675413PolnDNA polymerase nu147657998376752460Rat
9097301LOC103693769uncharacterized LOC103693769147404977374055535Rat
9071266LOC103693146non-histone chromosomal protein HMG-17 pseudogene147924762779248290Rat
9232718LOC103693090uncharacterized LOC103693090147643048676447245Rat
9366226LOC103693132transcription initiation factor IIA subunit 2 pseudogene147877623478776984Rat
9463298LOC103693135uncharacterized LOC103693135147892594478927167Rat
9426172LOC103693157uncharacterized LOC103693157148137565781381037Rat
9685395Tug1taurine up-regulated 1147851989478526927Rat
11368922Ube2d4l-ps2ubiquitin-conjugating enzyme E2D 4 like, pseudogene 2148063897680661336Rat
11469188LOC108352790ribosome biogenesis protein NSA2 homolog pseudogene148113038781131183Rat
11457748LOC108352794uncharacterized LOC108352794148272684082779159Rat
11364710Trnar-ucu6transfer RNA arginine (anticodon UCU) 6148713816287138247Rat
11437269LOC108352797uncharacterized LOC108352797148487819784931496Rat
11451885LOC108352778uncharacterized LOC108352778147540019275403500Rat
11371864LOC108352788uncharacterized LOC108352788148076324380777436Rat
11372689LOC108352800uncharacterized LOC108352800148755321287569267Rat
11402271LOC10835285860S ribosomal protein L35a pseudogene148385728083857747Rat
11379724LOC108352804uncharacterized LOC108352804149116119491169648Rat
11520377LOC108352789uncharacterized LOC108352789148084778780852539Rat
11478544LOC108352784uncharacterized LOC108352784147847105578487135Rat
11503487LOC10835278040S ribosomal protein S17 pseudogene147578019275784552Rat
11510814LOC10835277360S ribosomal protein L35a pseudogene147390897073909382Rat
11485372LOC108352775uncharacterized LOC108352775147394486773948002Rat
11489712LOC108352834acidic proline-rich protein PRP25-like147580977775810250Rat
41086352LOC120096640uncharacterized LOC120096640147529460975296325Rat
41202877LOC120096773U7 small nuclear RNA148268554882685609Rat
41381223Hsp90ab1-ps12heat shock protein 90 alpha family class B member 1, pseudogene 12148168000481697410Rat
41112705LOC120096818small nucleolar RNA SNORA17147411668774116816Rat
41168071LOC120096665uncharacterized LOC120096665148623305786252365Rat
41168377LOC120096740U6 spliceosomal RNA148833653488336640Rat
41249459LOC120096774U1 spliceosomal RNA147620785276207995Rat
41283680LOC120096751U6 spliceosomal RNA148113267581132780Rat
41205784LOC120096651uncharacterized LOC120096651148068845480691291Rat
41090605LOC120096813small nucleolar RNA SNORA17147867492978675059Rat
41116037LOC120096654uncharacterized LOC120096654148130338681306222Rat
41280378LOC12009665960S ribosomal protein L36-like148337163683371941Rat
41117376LOC120096838small nucleolar RNA U13147635049976350595Rat
41173477LOC120096788small nucleolar RNA SNORA24148598480185984933Rat
41388313LOC120096785U1 spliceosomal RNA148661831486618460Rat
41389389LOC120096836small nucleolar RNA SNORD125147992596379926059Rat
41094328LOC120096661uncharacterized LOC120096661148367437983681609Rat
41119182LOC120096507uncharacterized LOC120096507147815964578204665Rat
41390640Rps19-ps8ribosomal protein S19, pseudogene 8148154720481557070Rat
41149863LOC120096775U7 small nuclear RNA148268562382685685Rat
41391877LOC120096670uncharacterized LOC120096670148752987587534272Rat
41212773LOC120096770U7 small nuclear RNA147979888379798945Rat
41192253LOC120096657uncharacterized LOC120096657148183277181839913Rat
41214202LOC120096650uncharacterized LOC120096650148044524080451672Rat
41214355Rpl9-ps25ribosomal protein L9, pseudogene 25147894299578943846Rat
41394454LOC120096646uncharacterized LOC120096646147893168378942634Rat
41099865LOC120096644uncharacterized LOC120096644147678400976808773Rat
41368918LOC120096648uncharacterized LOC120096648148036530780368769Rat
41369058LOC120096656uncharacterized LOC120096656148156997981575100Rat
41369426LOC120096673uncharacterized LOC120096673149145269291489124Rat
41396070Trnap-agg61transfer RNA proline (anticodon AGG) 61147582503975825113Rat
41182224LOC120096841U2 spliceosomal RNA147925758779257761Rat
41218591LOC120096643uncharacterized LOC120096643147657959276580225Rat
41347538LOC120096660uncharacterized LOC120096660148329955083312397Rat
41070336LOC120096790small nucleolar RNA SNORA9148140798881408120Rat
41103205LOC120096641uncharacterized LOC120096641147535436075357481Rat
41127835LOC120096784small nucleolar RNA SNORA5148148671881486846Rat
41348836LOC120096676uncharacterized LOC120096676149189758991906807Rat
41271824LOC120096814small nucleolar RNA SNORA17148042132880421443Rat
41163873LOC120096668uncharacterized LOC120096668148696374286985133Rat
41082880LOC120096639uncharacterized LOC120096639147417208674176212Rat
41164776Gapdh-ps48Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 48148389039283895380Rat
41320425LOC120096797small nucleolar RNA SNORA48147764235877642497Rat
41377061LOC120096647uncharacterized LOC120096647147994542579946151Rat
41108877Rpl18-ps12ribosomal protein L18, pseudogene 12147695910076962041Rat
40971467LOC120096766U7 small nuclear RNA147818679478186857Rat
40996974LOC120096658uncharacterized LOC120096658148195653581961881Rat
40946069LOC120096522basic proline-rich protein-like148660180186603338Rat
41012300LOC120096861U4 spliceosomal RNA147379667773796760Rat
40974067Trnav-aac26transfer RNA valine (anticodon AAC) 26148113387081133942Rat
40952397LOC120096748U6 spliceosomal RNA147703748577037588Rat
41014043LOC120096821small nucleolar RNA SNORA17148731226387312390Rat
40927364LOC120096669uncharacterized LOC120096669148745718287529758Rat
40958885Gapdh-ps46Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 46148908863989089742Rat
41003175LOC120096860U4 spliceosomal RNA148118697281187083Rat
40960445Glo1-ps1glyoxalase 1, pseudogene 1147353484973535402Rat
40984137LOC120096862U4 spliceosomal RNA149199894591999070Rat
40985238LOC120096769U7 small nuclear RNA147980828579808347Rat
40961538LOC120096666uncharacterized LOC120096666148636582486368551Rat
41008473LOC120096858U4 spliceosomal RNA147920869279208868Rat
41008896Rpl9-ps27ribosomal protein L9, pseudogene 27148571020685718895Rat
40938982LOC120096505uncharacterized LOC120096505147616736176176360Rat
40939875LOC120096856U4 spliceosomal RNA148156919181569303Rat
41244728LOC120096652uncharacterized LOC120096652148071719180725962Rat
41078953LOC120096539uncharacterized LOC120096539148453086384531858Rat
41246592LOC120096793small nucleolar RNA SNORA18147705648377056611Rat
41028118LOC120096667uncharacterized LOC120096667148642547786445651Rat
41050910LOC120096653uncharacterized LOC120096653148079579280811073Rat
41248356Snora5csmall nucleolar RNA, H/ACA box 5C148148721881487354Rat
41256134LOC120096664uncharacterized LOC120096664148603994486053196Rat
41054942LOC120096840small nucleolar RNA ACA64148732777187327909Rat
41222219Hnrnpc-ps1heterogeneous nuclear ribonucleoprotein C, pseudogene 1148307259183073569Rat
41224647LOC120096767U7 small nuclear RNA147981769179817753Rat
41035330LOC120096506uncharacterized LOC120096506147772204177727496Rat
41062510Rps24-ps7ribosomal protein S24, pseudogene 7148052908380531185Rat
41062800LOC120096671uncharacterized LOC120096671149000679690019183Rat
41036241LOC120096792small Cajal body-specific RNA 16148128506181285200Rat
41227426Cops8-ps4COP9 signalosome subunit 8, pseudogene 3149055809790564564Rat
41039274LOC120096762U6 spliceosomal RNA147781364677813748Rat
41237133LOC120096675uncharacterized LOC120096675149167652491678907Rat
41018088LOC120096677uncharacterized LOC120096677149235369992358109Rat
41041262LOC120096789small nucleolar RNA SNORA44148934494589345050Rat
41067315LOC120096768U7 small nuclear RNA147982574679825808Rat
41068558C1h11orf98-ps3similar to human chromosome 11 open reading frame 98, pseudogene 3148143572081436342Rat
41308091Trnat-agu19transfer RNA threonine (anticodon AGU) 19147955217979552251Rat
41021963Gapdh-ps47Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 47148952183889522809Rat
41045844LOC120096674uncharacterized LOC120096674149163507091638131Rat
41309848LOC120096642uncharacterized LOC120096642147676986876776620Rat
41311414Carhsp1-ps1calcium regulated heat stable protein 1, pseudogene 1149074204590752015Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10102D14Mco2285147546949375469784Ratregion
10102D14Mco2285147546949375470354Ratregion
10102D14Mco2285147546975275469784Ratregion
10773D14Mit10260148205747182057735Ratregion
11086D14Mgh1119148068483380684938Ratregion
33965D14Mit15193148361068083610873Ratregion
34345D14Mgh2138147351328073513414Ratregion
34616D14Mit16133148082812980828266Ratregion
36299D14Rat20155148120475181204906Ratregion
36307D14Rat21141149119526891195399Ratregion
37660D14Rat49153149174233591742498Ratregion
37788D14Rat37226147580672875806970Ratregion
36512D14Rat18155147995092179951074Ratregion
34931D14Rat19160148068432080684482Ratregion
35837D14Rat27158147558256875582726Ratregion
38016D14Rat51193148346063583460830Ratregion
38212D14Rat57218147892987778930087Ratregion
38214D14Rat59207147510768375107886Ratregion
40396D14Rat108158148060100280601154Ratregion
40134D14Rat91160147812416678124328Ratregion
40342D14Rat92156147913128779131451Ratregion
38806D14Rat67145148347125583471397Ratregion
39030D14Rat38200149255388692554092Ratregion
39310D14Rat34228149034862590348856Ratregion
41986D14Arb10241147341532373415578Ratregion
43026D14Rat127218147442817974428411Ratregion
43027D14Rat144131147766864177668777Ratregion
42393D14Rat136237148148261181482839Ratregion
42394D14Rat137219148439090184391119Ratregion
40864D14Rat93223148086769580867915Ratregion
41138D14Rat94235148336806283368335Ratregion
45190D14Got66177148728538687285563Ratregion
45191D14Got63193148833061688331125Ratregion
45191D14Got63193148833093288331125Ratregion
45192D14Got67171148813325988133432Ratregion
45194D14Got6594148708200187082095Ratregion
45196D14Got70155147973972379739880Ratregion
45205D14Got87158148337426483374424Ratregion
45206D14Got62200148634847786348674Ratregion
45207D14Got64159148597384085974001Ratregion
60071D14Got5994147361846173618555Ratregion
60073D14Got61100147562240075622500Ratregion
60076D14Got79249149202972492029973Ratregion
60078D14Got83217149054282590543039Ratregion
60079D14Got84189149223454292234733Ratregion
62442D14Uia3195148625840386258598Ratregion
62469D1Uia1150147864030978640460Ratregion
66458D14Mco11270147892195778922228Ratregion
66465D14Mco15229148205748682057735Ratregion
629608D14Got69152147973619879736350Ratregion
67232D14Arb19215148385762283857837Ratregion
67234D14Arb21148205751882057712Ratregion
1630949D14Wox28115148082814880828263Ratregion
1632095D14Got123293149023375590234048Ratregion
1628890D13Got144160147995096779951127Ratregion
1628905D14Got135197148790240087902601Ratregion
1629395D14Got140199147467487374675072Ratregion
1638917D14Got165300148855449888554798Ratregion
1640481D14Got167200148854820788548407Ratregion
1637780D14Wox29215148039133780391552Ratregion
1634127D14Wox16184147547776775477951Ratregion
7206046Xbp190148039405780394147Ratregion
7206268Fgfr3130147699039376990604Ratregion
5035861PMC24996P1147149166654891666686Ratregion
5038632C86258209147427152974271738Ratregion
5036338Hdh141147599484975994990Ratregion
5039280RH127615196147852005478520250Ratregion
5039280RH127615196147852005478520250Ratregion
5036545Ywhah159147769724077697399Ratregion
5039022RH127468194147983040579830599Ratregion
5036645AU048701241147758518877585431Ratregion
5036691AU048890299147399938473999683Ratregion
5036993AU049852179149146059291460772Ratregion
5031340PMC145549P1196148093391280934108Ratregion
5025954RH130337181148682814286828323Ratregion
5025972RH130406186148074867480748860Ratregion
5026080RH130833210148638199386382203Ratregion
502861333.MMHAP29FRC12.seq191147725353677253727Ratregion
5028703SHGC-59523113147415911374159226Ratregion
5031456AU048263167149137618791376354Ratregion
5026194RH131279182147567366175673843Ratregion
5026204RH131314217148126732781267544Ratregion
5031594AU047808209147800648578006694Ratregion
5026398RH132053185147698457776984762Ratregion
5029013RH143186231148191846781918698Ratregion
5026482RH132382191147904962079049811Ratregion
5029095RH143504132148015806980158201Ratregion
5029217RH143960102147959937879599480Ratregion
5034512BI280365192147786364477863825Ratregion
5026876RH133865192147415903674159227Ratregion
5032209AI481085120147383542573835545Ratregion
5032223AF07684594148369233683692430Ratregion
5032301AI84338996148399336483993460Ratregion
5035100D12S364437147705157577052012Ratregion
5029689BF419609143147358505473585197Ratregion
5029693AA859841199148134393681344135Ratregion
5029695BF419924204148135340881353612Ratregion
5029709BE096205155147817744278177597Ratregion
5032393AI852688151147995623379956384Ratregion
5032493D5Ertd110e241147427187774272118Ratregion
5032571WI-20033278148016166280161940Ratregion
5027291AI504350100147751762677517726Ratregion
5027415AW20875489147881366778813756Ratregion
5027417AW122071156148000071480000870Ratregion
5029977BI285876220148755106387551283Ratregion
5030203BF401732135147879950978799644Ratregion
5032881RH136830130148097506180975191Ratregion
5032889RH136858215147509702275097237Ratregion
5024998M81342139147698733776987476Ratregion
5025082RH127162249147821806778218316Ratregion
5027657Gprk2l403147604812476048527Ratregion
5030247BE099486155147882387578824030Ratregion
5033099RH137594196148628742986287625Ratregion
5025276RH127695181147610873776108918Ratregion
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5033241RH138107143149099693090997073Ratregion
5028097X78987161149134414391344304Ratregion
5028330SGC32761126148134242281342548Ratregion
5025858RH129959194147351005773510251Ratregion
5025932RH130248180148039544480395624Ratregion
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5031115BE109850158147736525877365416Ratregion
5052113RH94847150147964322279643375Ratregion
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5054029RH142989190148637665786376847Ratregion
5056695RH144526212147454481874545030Ratregion
5052023RH94795302148204793182048209Ratregion
5054281RH143134170148637876486378934Ratregion
5054353RH143175142149160928291609424Ratregion
5057412AA997364200147610196276102406Ratregion
5057510AA819574152147584591575846067Ratregion
5052111RH94846150147964323279643385Ratregion
5055255RH143696142148084274980842891Ratregion
5055279RH143710207147683267776832884Ratregion
5055479RH143825188147780483477805022Ratregion
5055687RH143944202147657433576574537Ratregion
5058570BI290800178147683464976834827Ratregion
5058674BI284455168148134288181343048Ratregion
5055937RH144089299147959901779599316Ratregion
5055121RH143618182147817271378172895Ratregion
5059594BE097386168147651717276517340Ratregion
5056143RH144208264148700468887004952Ratregion
5056641RH144495207147393523873935445Ratregion
5056735RH144549240147700319777003437Ratregion
5052239D19343158147908343979083597Ratregion
5052301N28202186147959896379599149Ratregion
5052373X95591184149167065291670836Ratregion
5052373X95591184149167065291670836Ratregion
5058908BF387217171148117094581171116Ratregion
5059034BF387395198147897778778977985Ratregion
5059734AI55680394149139712391397217Ratregion
5059786BE097865172148682711986827291Ratregion
5059820BE097977160148137871081378870Ratregion
5055803RH144011113147888608778886200Ratregion
5053089RH142447165147516287675163041Ratregion
5059904BF388196120148015794480158064Ratregion
5058262BI27788097147640283776402934Ratregion
5058386BG376858113147878153978781652Ratregion
5058402AI058742192147366884973669041Ratregion
5058404AI058790109147821808278218191Ratregion
5058526BF393136117148058807280588189Ratregion
5053571RH142726105147905013779050242Ratregion
5059344AI059001182147657322176573403Ratregion
5057804BI277150154147956617579566329Ratregion
5057812BI277160176147956621979566392Ratregion
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5053717RH142810299148662615386626452Ratregion
5049868RH133728160147534256475342724Ratregion
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5052591RH125754251148148283581483086Ratregion
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5054125RH143045217147675661576756832Ratregion
5050468RH134074180147966429879664478Ratregion
5052921RH142351150147427183274271982Ratregion
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5054245RH143114194148329262683292820Ratregion
5050642RH134174192147524673875246930Ratregion
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5040736RH128454220147851958578519805Ratregion
5041000RH128605209148084298080843189Ratregion
5043562RH130096181148368875383688934Ratregion
5045120RH130995190148078118480782359Ratregion
5045288RH131092193148058488380585076Ratregion
5045464RH131193208147572286875723076Ratregion
5041588RH128943194147748262677482820Ratregion
5041688RH129001209149149238491492593Ratregion
5048710RH133061206147901217479012380Ratregion
5048748RH133082196147486594274866138Ratregion
5048818RH133123204147879646378796667Ratregion
5044884RH130859211147383543573835646Ratregion
5044892RH130863183148070712280707305Ratregion
5046186RH131608198149161028091610478Ratregion
5047614RH132429196149167095691671152Ratregion
5047696RH132476183148205225082052433Ratregion
5048880RH133159217147905161779051834Ratregion
5045698RH131327180148052574980525929Ratregion
5045740RH131351182147879292478793106Ratregion
5047874RH132578185147571601975716204Ratregion
5046604RH131849188148382909283829280Ratregion
5046684RH131895204147547092575471132Ratregion
5049178RH133330185148121718581217370Ratregion
5049192RH133338202147799069977990901Ratregion
5049722RH133644210149163954391639753Ratregion
5047240RH132214186149066617590666361Ratregion
5039434RH127704203147683571476835917Ratregion
5047318RH132258180147837419578374375Ratregion
5047358RH132281204147698746476987668Ratregion
5048424RH132895186147709998177100167Ratregion
5048448RH132909201147793616377936364Ratregion
5048536RH132960220147566441875664638Ratregion
5049516RH133526150148039931580399465Ratregion
5039378RH127671217147881362278813839Ratregion
5043230RH129907182148000048680000668Ratregion
5040682RH128423217148097647280976689Ratregion
5043284RH129938213147908338079083593Ratregion
7192201Igfbp187148205037382051888Ratregion
5042560RH129508218147914013579140353Ratregion
5042578RH129519208148146556181465971Ratregion
5040988RH128598183147880337278803555Ratregion
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5040450RH128290209147962594879626157Ratregion
5042996RH129769194147429206674292260Ratregion
5072830RH137079164148000006180000225Ratregion
5072830RH137079164148000006180000225Ratregion
5073870RH137686248147815291678153164Ratregion
5075394RH138569138148191856081918698Ratregion
5075622RH138701192149068689190687083Ratregion
5072482RH136875161147934052379340684Ratregion
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5067018AU048014178147717243777172610Ratregion
5067142AU047937234147845776178457995Ratregion
5067156AU047926260147512186375122123Ratregion
5067526AU047692139147955152779551666Ratregion
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5068424AU047153165148936775089367910Ratregion
5069985RH94401188148638186886382056Ratregion
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5068820AU046906281147807991478080195Ratregion
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5070213RH94537165148205256082052725Ratregion
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5083889AA893195121148376810583768226Ratregion
5503021Gal3st10147888407978885246Ratregion
5503803UniSTS:471314379148205871282060338Ratregion
5503890SRCR23H933148889815688899089Ratregion
5504805Hrmt1l2212148755203187552243Ratregion
5504967Igfbp1259148204781682049376Ratregion
5505446Zmiz2257148126162081261877Ratregion
5505484REN75940251147769746177697712Ratregion
5506027Ptdss2134147798818977988530Ratregion
5506384UniSTS:4791091529147996573979967268Ratregion
5506384UniSTS:4791091529147996573979967268Ratregion
5506340UniSTS:478869148147452168674521834Ratregion
5506342UniSTS:478870143147450308074503223Ratregion
5506346UniSTS:478895134147347645373476587Ratregion
5506457RH17231109147995660679956715Ratregion
5506290AFM324xh5861148682304686823907Ratregion
5506819G46230234148349301283493246Ratregion
5506813G45955130147847604678476176Ratregion
5507267fb79b101407148291618282917589Ratregion
5507113UniSTS:224593179147690166976901848Ratregion
5507321G48108118147412771674127831Ratregion
5500288D21S19520147413119174132380Ratregion
5500067UniSTS:236520158148637010586370263Ratregion
5499875UniSTS:23516384147735749877357582Ratregion
5499877UniSTS:235167121147504985475049975Ratregion
5499879UniSTS:235168268147428973974290007Ratregion
5500061UniSTS:236495193147852504178525234Ratregion
5502994D5Jcs82143147618816276188305Ratregion
5500382GDB:373416118147964580479645922Ratregion
5500491RH126561213147640130976401522Ratregion
5500685STS-Z408571551148128435381285904Ratregion
5501281D12S13291550147566075075661576Ratregion
5501289G06555325147996540579965730Ratregion
5501289G06555325147996540579965730Ratregion
5502098MARC_4333-4334:996679561:1663148139530481395967Ratregion
5502100MARC_4335-4336:996679558:1280148121586481216450Ratregion
5505277BG0743891424148203414482035568Ratregion
5501888MARC_16871-16872:1015445619:10147570866475709293Ratregion
5502517RH125184160147350997473510134Ratregion
5502309RH124401150147715501977155169Ratregion
5502477RH125040122148202820982028331Ratregion
5502581RH125436150147806828378068433Ratregion
Position Markers

Flank 1: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Peak: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Flank 2: (D14Rat38)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21492,553,886 - 92,554,092 (+)MAPPER
Rnor_6.014102,549,183 - 102,549,388NCBI
Rnor_5.014102,293,972 - 102,294,177UniSTS
RGSC_v3.41499,079,814 - 99,080,020RGD
RGSC_v3.41499,079,815 - 99,080,020UniSTS
RGSC_v3.11499,098,960 - 99,099,165RGD
Celera1491,586,511 - 91,586,716UniSTS
RH 3.4 Map14705.3UniSTS
RH 3.4 Map14705.3RGD
SHRSP x BN Map1463.96UniSTS
SHRSP x BN Map1463.96RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147341532392554092Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147341532392554092Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)148205747195876975Rat
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)149255388695876975Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days; OGTT was performed after over-night fasting 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752