Gluco29 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco29 (Glucose level QTL 29) Rattus norvegicus

Symbol: Gluco29
Name: Glucose level QTL 29
RGD ID: 1582255
Previously known as: Delta AUC (dex-sucr)
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: absolute change in blood glucose level area under curve   (CMO:0002034)    
LOD Score: 3.1
P Value: 0.0025
Variance: 14.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81477,640,071 - 96,755,654RGD_MAPPER_PIPELINE
mRatBN7.21473,415,323 - 92,554,092RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01478,172,765 - 102,549,388RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01478,146,760 - 102,294,177RGDRnor_5.0
RGSC_v3.41478,978,644 - 99,080,020RGDRGSC_v3.4
RGSC_v3.11454,099,165 - 99,099,165RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Dynamic genetic architecture of metabolic syndrome attributes in the rat. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1310417Evc2EvC ciliary complex subunit 2147759158177679286Rat
735186EvcEvC ciliary complex subunit 1147768090177722608Rat
2407Crmp1collapsin response mediator protein 1147773467577780916Rat
40960445Glo1-ps1glyoxalase 1, pseudogene 1147775958877760141Rat
7596857C14h4orf50similar to human chromosome 4 open reading frame 50147778594877871957Rat
1562401Jakmip1janus kinase and microtubule interacting protein 1147787103477991566Rat
41012300LOC120096861U4 spliceosomal RNA147802140778021488Rat
402379628LOC134481775uncharacterized LOC134481775147802609978029878Rat
68954Wfs1wolframin ER transmembrane glycoprotein147803520578059718Rat
620920Ppp2r2cprotein phosphatase 2, regulatory subunit B, gamma147807127478156212Rat
402293285LOC134481776large ribosomal subunit protein eL33-like147812991178134057Rat
1308840Man2b2mannosidase, alpha, class 2B, member 2147819379778218802Rat
628631Mrfap1Morf4 family associated protein 1147822722578229002Rat
402164303LOC134481777uncharacterized LOC134481777147825928278263216Rat
1306037Bloc1s4biogenesis of lysosomal organelles complex 1 subunit 4147826773578269035Rat
9097301LOC103693769uncharacterized LOC103693769147827448378279637Rat
1596848Kiaa0232KIAA0232 homolog147831866078384012Rat
41112705LOC120096818small nucleolar RNA SNORA17147834138478341513Rat
41082880LOC120096639uncharacterized LOC120096639147839666878400719Rat
1309993Tbc1d14TBC1 domain family, member 14147839734578496863Rat
7635591Selenok-ps3selenoprotein K, pseudogene 3147842888478429682Rat
1305153Cfap184cilia and flagella associated protein 184147850125678503715Rat
1561605Tada2btranscriptional adaptor 2B147850393978523715Rat
70947Grpel1GrpE-like 1, mitochondrial147851704978522868Rat
402351335LOC134481854uncharacterized LOC134481854147857614678578029Rat
1310621Sorcs2sortilin-related VPS10 domain containing receptor 2147859229078960582Rat
402195755LOC134481778uncharacterized LOC134481778147866155478663148Rat
1307368Psapl1prosaposin-like 1147876930478771864Rat
619959Afap1actin filament associated protein 1147896796179081032Rat
402277211LOC134481856uncharacterized LOC134481856147904965379051979Rat
1303094Ablim2actin binding LIM protein family, member 2147909004679214986Rat
1305610Sh3tc1SH3 domain and tetratricopeptide repeats 1147923032279274622Rat
1308120Htra3HtrA serine peptidase 3147929353579321936Rat
69245Acox3acyl-CoA oxidase 3, pristanoyl147935860479405160Rat
1308380Trmt44tRNA methyltransferase 44147939994379424761Rat
620496Cpzcarboxypeptidase Z147944824279471557Rat
41086352LOC120096640uncharacterized LOC120096640147951920479520917Rat
1304928Hmx1H6 family homeobox 1147958584079589626Rat
402368304LOC134481908uncharacterized LOC134481908147966166779665373Rat
2058Adra2cadrenoceptor alpha 2C147969551479697476Rat
402165518LOC134481690ubiquitin-conjugating enzyme E2 variant 1-like147984211479843022Rat
620700Lrpap1LDL receptor related protein associated protein 1147987600279888011Rat
1566416Dok7docking protein 7147989005179924081Rat
70909HgfacHGF activator147993221979938773Rat
3564Rgs12regulator of G-protein signaling 12147994056180048637Rat
11489712Rgs12l1regulator of G-protein signaling 12 like 1148003440180034874Rat
41396070Trnap-agg61transfer RNA proline (anticodon AGG) 61148004966380049737Rat
7565325LOC102556834uncharacterized LOC102556834148005037980058014Rat
1565796Msantd1Myb/SANT DNA binding domain containing 1148005998580070336Rat
68337Htthuntingtin148007045680219668Rat
402187134LOC134481857uncharacterized LOC134481857148021941180260371Rat
61858Grk4G protein-coupled receptor kinase 4148023069980305292Rat
1305605Nop14NOP14 nucleolar protein148030591280327053Rat
1311900Mfsd10major facilitator superfamily domain containing 10148032796180331984Rat
2041Add1adducin 1148033324280401641Rat
40938982LOC120096505uncharacterized LOC120096505148039195280400980Rat
1310588Sh3bp2SH3-domain binding protein 2148040068580437887Rat
41249459Rnvu1-21RNA, variant U1 small nuclear 21148043243980432582Rat
1307717Tnip2TNFAIP3 interacting protein 2148045293680470141Rat
1309634Fam193afamily with sequence similarity 193, member A148048074280607086Rat
402132353LOC134481858U6 snRNA-associated Sm-like protein LSm3148054125080545534Rat
41117376LOC120096838small nucleolar RNA U13148057507580575171Rat
3583Rnf4ring finger protein 4148062586480647138Rat
1564567Cfap99cilia and flagella associated protein 99148062586480692753Rat
1310151Zfyve28zinc finger FYVE-type containing 28148069299780778606Rat
1305093Mxd4Max dimerization protein 4148078676880800790Rat
41218591LOC120096643uncharacterized LOC120096643148080415880804784Rat
1591723Haus3HAUS augmin-like complex, subunit 3148080503680977012Rat
1305719Nat8lN-acetyltransferase 8-like148098062980987264Rat
1560394Nicol1NELL2 interacting cell ontogeny regulator 1148099269780994213Rat
1305556Nelfanegative elongation factor complex member A148103347081057546Rat
1307955Nsd2nuclear receptor binding SET domain protein 2148105772781135866Rat
401998144LOC134481859uncharacterized LOC134481859148106414481084758Rat
1359678Letm1leucine zipper and EF-hand containing transmembrane protein 1148116726881206776Rat
620714Fgfr3fibroblast growth factor receptor 3148121180081227215Rat
40952397LOC120096748U6 spliceosomal RNA148126203281262135Rat
1302948Tacc3transforming, acidic coiled-coil containing protein 3148127575581289894Rat
41246592LOC120096793small nucleolar RNA SNORA18148128102981281157Rat
1310828Tmem129transmembrane protein 129, E3 ubiquitin ligase148128985281295416Rat
1584682Slbpstem-loop histone mRNA binding protein148129547981306446Rat
1563315Fam53afamily with sequence similarity 53, member A148130812781348930Rat
1597116Psmb3-ps5proteasome 20S subunit beta 3, pseudogene 5148137650381378359Rat
1564874Nkx1-1NK1 homeobox 1148152120681524788Rat
1306371UvssaUV-stimulated scaffold protein A148153517981576444Rat
1309877Maeamacrophage erythroblast attacher, E3 ubiquitin ligase148158178481615246Rat
402276308LOC134481860uncharacterized LOC134481860148160176481614320Rat
402329402LOC134481861uncharacterized LOC134481861148164867281654706Rat
2441Ctbp1C-terminal binding protein 1148167995681707331Rat
708584Spon2spondin 2148171307081742510Rat
3713Slc5a1solute carrier family 5 member 1148177849581843084Rat
41320425LOC120096797small nucleolar RNA SNORA48148186685081866989Rat
3978Ywhahtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta148192081981930202Rat
41035330LOC120096506uncharacterized LOC120096506148194595681951213Rat
402328328LOC134481862uncharacterized LOC134481862148194764681978632Rat
1311535Depdc5DEP domain containing 5, GATOR1 subcomplex subunit148195677782087392Rat
41039274LOC120096762U6 spliceosomal RNA148203812382038225Rat
2319299LOC100361879ATP synthase subunit epsilon, mitochondrial-like148208750982088367Rat
1305469Prr14lproline rich 14-like148209436082160985Rat
1596729Pisdphosphatidylserine decarboxylase148216640182215479Rat
1560636Sfi1SFI1 centrin binding protein148221542382272811Rat
1560908Eif4enif1eukaryotic translation initiation factor 4E nuclear import factor 1148228056682328559Rat
1588187Snrpg-ps1small nuclear ribonucleoprotein polypeptide G, pseudogene 1148229258682292980Rat
1304993Drg1developmentally regulated GTP binding protein 1148232832082344416Rat
1308337Patz1POZ (BTB) and AT hook containing zinc finger 1148237822682396679Rat
62056Limk2LIM domain kinase 2148238425682509755Rat
40971467LOC120096766U7 small nuclear RNA148241044182410504Rat
1311203Pik3ip1phosphoinositide-3-kinase interacting protein 1148242831582440261Rat
7740095Rpl7-ps1ribosomal protein L7, pseudogene 1148247531682477039Rat
1564777Rnf185ring finger protein 185148251615382554199Rat
402132113LOC134481864uncharacterized LOC134481864148255268482553724Rat
1305323Pla2g3phospholipase A2, group III148258990882597542Rat
620541Inpp5jinositol polyphosphate-5-phosphatase J148259778982608930Rat
1565037Selenomselenoprotein M148261945382622056Rat
1310216Smtnsmoothelin148262222382644525Rat
402138347LOC134481779prefoldin subunit 4-like148268641782688261Rat
9685395Tug1taurine up-regulated 1148274350182750534Rat
402236050LOC134481691taurine up-regulated 1148274350282752454Rat
1310842Morc2MORC family CW-type zinc finger 2148275244482794980Rat
1310505Osbp2oxysterol binding protein 2148280869382970386Rat
41090605LOC120096813small nucleolar RNA SNORA17148289853182898661Rat
402348104LOC134481865uncharacterized LOC134481865148296421782969728Rat
9366226LOC103693132transcription initiation factor IIA subunit 2 pseudogene148299982183000574Rat
1308775C14h5orf52similar to human chromosome 5 open reading frame 52148300490683013549Rat
1306929Dusp18dual specificity phosphatase 18148301385083035168Rat
708484Slc35e4solute carrier family 35, member E4148302691483033778Rat
620681Tcn2transcobalamin 2148303693583052187Rat
1559814Pes1pescadillo ribosomal biogenesis factor 1148307434683090726Rat
1583379Gal3st1galactose-3-O-sulfotransferase 1148309426583109992Rat
1565810Sec14l4SEC14-like lipid binding 4148313633583152382Rat
41394454LOC120096646uncharacterized LOC120096646148315362483165292Rat
41214355Rpl9-ps25ribosomal protein L9, pseudogene 25148316641783167431Rat
620812Sec14l3SEC14-like lipid binding 3148316815483181240Rat
1359705Mtfp1mitochondrial fission process 1148319201383195853Rat
621779Sec14l2SEC14-like lipid binding 2148319738483222059Rat
1310738Rnf215ring finger protein 215148323023483236668Rat
1584653Ccdc157coiled-coil domain containing 157148323601083255012Rat
402173537LOC134481866uncharacterized LOC134481866148324135083242526Rat
1311477Sf3a1splicing factor 3A subunit 1148325497183275720Rat
1311641Tbc1d10aTBC1 domain family, member 10a148327815183307178Rat
1585012Osmoncostatin M148332720283332073Rat
620865LifLIF, interleukin 6 family cytokine148335460283364053Rat
41008473LOC120096858U4 spliceosomal RNA148343224483432420Rat
1565447Hormad2HORMA domain containing 2148343855583524015Rat
41182224LOC120096841U2 spliceosomal RNA148348113083481304Rat
1310972Mtmr3myotubularin related protein 3148356406583684573Rat
1561422Ascc2activating signal cointegrator 1 complex subunit 2148372697583771312Rat
41308091Trnat-agu19transfer RNA threonine (anticodon AGU) 19148377568783775759Rat
1595126Uqcr10ubiquinol-cytochrome c reductase, complex III subunit X148378965783791914Rat
1559774Zmat5zinc finger, matrin type 5148379100583823095Rat
3169Nf2NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor148385089483934263Rat
1310419Nipsnap1nipsnap homolog 1148395771483981579Rat
1304991Thoc5THO complex subunit 5148398230284016193Rat
41212773LOC120096770U7 small nuclear RNA148402235884022420Rat
41224647LOC120096767U7 small nuclear RNA148403175984031821Rat
41067315LOC120096768U7 small nuclear RNA148403981384039875Rat
3159Nefhneurofilament heavy chain148404442884054413Rat
2064Ap1b1adaptor related protein complex 1 subunit beta 1148409352984144835Rat
402016834LOC134481867uncharacterized LOC134481867148410721284113419Rat
41389389Snord125small nucleolar RNA, C/D box 125148414002084140116Rat
41377061LOC120096647uncharacterized LOC120096647148415945584160200Rat
1306100Rasl10aRAS-like, family 10, member A148416914184170519Rat
1311206Gas2l1growth arrest-specific 2 like 1148416939884175514Rat
1307258Ewsr1EWS RNA-binding protein 1148417941384208149Rat
1311827Rhbdd3rhomboid domain containing 3148420815584214334Rat
1593795Emid1EMI domain containing 1148421453084257628Rat
620789Kremen1kringle containing transmembrane protein 1148429593184361534Rat
402046207C14h22orf31similar to human chromosome 22 open reading frame 31148437341484374948Rat
1593771Znrf3zinc and ring finger 3148437566884527465Rat
402383183LOC134481868uncharacterized LOC134481868148457854784583910Rat
7673923LOC102549967uncharacterized LOC102549967148458273184591120Rat
1303073Xbp1X-box binding protein 1148460462384609707Rat
1561762Ccdc117coiled-coil domain containing 117148461428284623648Rat
41271824LOC120096814small nucleolar RNA SNORA17148463531484635429Rat
1592623Frg2FSHD region gene 2148464124584643565Rat
41214202LOC120096650uncharacterized LOC120096650148465895884665640Rat
735187Ankrd48ankyrin repeat domain 48148466567184782434Rat
402225134LOC134481869small ribosomal subunit protein eS24-like148474399384744412Rat
1597115Kansl2-ps4KAT8 regulatory NSL complex subunit 2, pseudogene 4148475228584754361Rat
1306014Mrps24mitochondrial ribosomal protein S24148479864984802777Rat
1564681Urgcpupregulator of cell proliferation148480861684852785Rat
70941Dbnldrebrin-like148488008584895122Rat
3313Pgam2phosphoglycerate mutase 2148489576384897874Rat
41205784LOC120096651uncharacterized LOC120096651148490211384905243Rat
1308247PolmDNA polymerase mu148492103984930649Rat
1306922Aebp1AE binding protein 1148495157784962840Rat
1304954Pold2DNA polymerase delta 2, accessory subunit148496293384969148Rat
11371864LOC108352788uncharacterized LOC108352788148497586884992691Rat
1308262Myl7myosin light chain 7148499464484997173Rat
2670Gckglucokinase148499901985041098Rat
41050910LOC120096653uncharacterized LOC120096653148501397185038776Rat
70897Ykt6YKT6 v-SNARE homolog148504139385057347Rat
2262Camk2bcalcium/calmodulin-dependent protein kinase II beta148505916685148121Rat
1642416Nudcd3NudC domain containing 3148519027685273655Rat
402459042LOC134481870uncharacterized LOC134481870148519424885197921Rat
1303135Npc1l1NPC1 like intracellular cholesterol transporter 1148528538785305050Rat
1597114Rpl13a-ps10ribosomal protein L13A, pseudogene 10148531332885314328Rat
1303195Ddx56DEAD-box helicase 56148532594285336262Rat
1306319Tmed4transmembrane p24 trafficking protein 4148533898085343577Rat
11469188LOC108352790ribosome biogenesis protein NSA2 homolog pseudogene148534431885345114Rat
41283680LOC120096751U6 spliceosomal RNA148534660685346711Rat
40974067Trnav-aac26transfer RNA valine (anticodon AAC) 26148534780185347873Rat
1561359Ogdhoxoglutarate dehydrogenase148536394985431405Rat
41003175LOC120096860U4 spliceosomal RNA148540094585401014Rat
1309256Zmiz2zinc finger, MIZ-type containing 2148546532385481860Rat
3372Ppiapeptidylprolyl isomerase A148549122385496884Rat
41036241LOC120096792small Cajal body-specific RNA 16148549898585499124Rat
1587865H2az2H2A.Z variant histone 2148550722885526166Rat
402443988LOC134481693protein MIX23-like148552597885531276Rat
402120942LOC134481871U1 small nuclear ribonucleoprotein C-like148554134785541887Rat
1559465Purbpurine rich element binding protein B148555629685558779Rat
2322065LOC10036049160S ribosomal protein L13-like148556858485575407Rat
1306016Myo1gmyosin IG148560061985615760Rat
7606883LOC102547700uncharacterized LOC102547700148561971185622785Rat
402204643LOC134478783small nucleolar RNA SNORA9148562190585622037Rat
1308067Ccm2CCM2 scaffold protein148563233885678016Rat
41068558C1h11orf98-ps3similar to human chromosome 11 open reading frame 98, pseudogene 3148564963685650003Rat
1559824NacadNAC alpha domain containing148567921585688742Rat
1309737Tbrg4transforming growth factor beta regulator 4148569673885704691Rat
41127835Snora5asmall nucleolar RNA, H/ACA box 5A148570063385700761Rat
41248356Snora5csmall nucleolar RNA, H/ACA box 5C148570113385701269Rat
621851Wapwhey acidic protein148571703885719159Rat
61873Ramp3receptor activity modifying protein 3148574131485758813Rat
1590593Ldha-ps24lactate dehydrogenase A, pseudogene 24148577514885775974Rat
40939875LOC120096856U4 spliceosomal RNA148578308385783201Rat
41369058LOC120096656uncharacterized LOC120096656148578387785788998Rat
1591457Eif6-ps1eukaryotic translation initiation factor 6, pseudogene 1148579800385798950Rat
41381223Hsp90ab1-ps12heat shock protein 90 alpha family class B member 1, pseudogene 12148589388185895328Rat
402405232LOC134481780uncharacterized LOC134481780148604360886045592Rat
402063687LOC134481781uncharacterized LOC134481781148606368386071739Rat
1309318Adcy1adenylate cyclase 1148612511986234459Rat
40996974LOC120096658uncharacterized LOC120096658148617011386175756Rat
2872Igfbp1insulin-like growth factor binding protein 1148626127786266344Rat
2874Igfbp3insulin-like growth factor binding protein 3148627020886277944Rat
1586609Mospd1l1motile sperm domain containing 1 like 1148650141586503257Rat
2318182Apoo-ps3apolipoprotein O, pseudogene 3148670113386701718Rat
41202877LOC120096773U7 small nuclear RNA148689935586899416Rat
41149863LOC120096775U7 small nuclear RNA148689943086899492Rat
11457748LOC108352794uncharacterized LOC108352794148694062686993990Rat
41222219Hnrnpc-ps1heterogeneous nuclear ribonucleoprotein C, pseudogene 1148728642587287463Rat
1564174Tns3tensin 3148738744187619457Rat
41347538LOC120096660uncharacterized LOC120096660148751331787526162Rat
41280378LOC12009665960S ribosomal protein L36-like148758194787586444Rat
1564724Pkd1l1polycystin 1 like 1, transient receptor potential channel interacting148776674587888647Rat
1591976Hus1HUS1 checkpoint clamp component148790245887917221Rat
1591975Sun3Sad1 and UNC84 domain containing 3148792389187962699Rat
1587626C14h7orf57similar to human chromosome 7 open reading frame 57148796223187982043Rat
1305566Upp1uridine phosphorylase 1148802315588043036Rat
11402271LOC10835285860S ribosomal protein L35a pseudogene148807102988071481Rat
1305895Abca13ATP binding cassette subfamily A member 13148808714688589868Rat
41164776Gapdh-ps48Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 48148810619488109119Rat
1591358Tmem161bl1transmembrane protein 161B148820274488206604Rat
41078953LOC120096539uncharacterized LOC120096539148873579288755519Rat
11437269LOC108352797uncharacterized LOC108352797148909188989145190Rat
1563894Morf4l1-ps5mortality factor 4 like 1, pseudogene 5148917082389171858Rat
401978316LOC134481911cellular tumor antigen p53-like148952171489522831Rat
1589624Vwc2von Willebrand factor C domain containing 2148989754390038732Rat
41008896Rpl9-ps27ribosomal protein L9, pseudogene 27148992388489932577Rat
1563985Zpbpzona pellucida binding protein149004720790244727Rat
41173477LOC120096788small nucleolar RNA SNORA24149019846190198593Rat
1309870Spmip7sperm microtubule inner protein 7149024408790299294Rat
402290470LOC134481852large ribosomal subunit protein eL37-like147849894678499522Rat
402390058LOC134481853uncharacterized LOC134481853147857801178584553Rat
402444594LOC134481855uncharacterized LOC134481855147908103479084944Rat
11503487Rps17l4ribosomal protein S17 like 4148000850180010335Rat
9232718LOC103693090uncharacterized LOC103693090148065505880671755Rat
41108877Rpl18-ps12ribosomal protein L18, pseudogene 12148118365781184145Rat
402024857LOC134481863uncharacterized LOC134481863148227286482275469Rat
11478544LOC108352784uncharacterized LOC108352784148269409982702708Rat
7642008Hmgn1l3high mobility group nucleosome binding domain 1 like 3148298157582993912Rat
9463298LOC103693135uncharacterized LOC103693135148314952683150614Rat
7704064LOC102549281uncharacterized LOC102549281148319719983214627Rat
9071266LOC103693146non-histone chromosomal protein HMG-17 pseudogene148347044383471837Rat
7574864Rpl18-ps8ribosomal protein L18, pseudogene 8148477897784779499Rat
11368922Ube2d4l-ps2ubiquitin-conjugating enzyme E2D 4 like, pseudogene 2148485294884875306Rat
11520377LOC108352789uncharacterized LOC108352789148506174085066634Rat
9426172LOC103693157uncharacterized LOC103693157148558513185594952Rat
402155933LOC134481909uncharacterized LOC134481909148592709385927668Rat
41192253LOC120096657uncharacterized LOC120096657148604557186053112Rat
402073624LOC134481782uncharacterized LOC134481782148620303086217775Rat
401979460LOC134481910uncharacterized LOC134481910148767649887681005Rat
7662247LOC102552528uncharacterized LOC102552528148998470090001130Rat
1304774Castor1cytosolic arginine sensor for mTORC1 subunit 1148330971083314123Rat
1359269Cabp7calcium binding protein 7148382232283832667Rat
41256134LOC120096664uncharacterized LOC120096664149024662290266849Rat
1597113Pgm1-ps1phosphoglucomutase 1, pseudogene 1149030535490306666Rat
1562979Ikzf1IKAROS family zinc finger 1149046869690556522Rat
1307112Fignl1fidgetin-like 1149057309090595342Rat
40961538LOC120096666uncharacterized LOC120096666149058023190582306Rat
2494Ddcdopa decarboxylase149059230490682830Rat
41028118LOC120096667uncharacterized LOC120096667149063525690658938Rat
1566234Grb10growth factor receptor bound protein 10149070865390816399Rat
7743232LOC102552764uncharacterized LOC102552764149082389990840773Rat
402117660LOC134481784uncharacterized LOC134481784149085720290917866Rat
402101690LOC134481783uncharacterized LOC134481783149094593090960315Rat
1312002Coblcordon-bleu WH2 repeat protein149104172191274272Rat
11364710Trnar-ucu6transfer RNA arginine (anticodon UCU) 6149135173591351820Rat
41014043LOC120096821small nucleolar RNA SNORA17149152582391525950Rat
41054942LOC120096840small nucleolar RNA ACA64149154133191541469Rat
2320935Prmt1l1protein arginine methyltransferase 1 like 1149176460291765863Rat
11372689LOC108352800uncharacterized LOC108352800149176981191782082Rat
1582940Srbd1-ps1S1 RNA binding domain 1, pseudogene 1149207751392087692Rat
1561286Gapdh-ps102Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 102149222283392223925Rat
41168377LOC120096740U6 spliceosomal RNA149255001192550117Rat
7731769LOC102553529uncharacterized LOC102553529149270140492716326Rat
2323894Glo1-ps2glyoxalase 1, pseudogene 2149324459393250729Rat
40958885Gapdh-ps46Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 46149330227193314266Rat
2320735Pom121l12POM121 transmembrane nucleoporin-like 12149332194293323011Rat
2323556Rnf115-ps1ring finger protein 115, pseudogene 1149353859793539475Rat
41041262LOC120096789small nucleolar RNA SNORA44149355835393558458Rat
402310426LOC134481786uncharacterized LOC134481786149365407093664993Rat
41021963Gapdh-ps47Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 47149373523093736201Rat
41062800LOC120096671uncharacterized LOC120096671149422023394232697Rat
402307021LOC134481787uncharacterized LOC134481787149433724294364809Rat
402285410LOC134481788COP9 signalosome complex subunit 8-like149477472394775347Rat
1596197Vstm2aV-set and transmembrane domain containing 2A149487325995117189Rat
41311414Carhsp1-ps1calcium regulated heat stable protein 1, pseudogene 1149495537494965342Rat
402129448LOC134481785uncharacterized LOC134481785149111370191115631Rat
7502494LOC102553003uncharacterized LOC102553003149114137591204411Rat
1596170Sec61gSec61 translocon subunit gamma149511308395119458Rat
2543Egfrepidermal growth factor receptor149537862695551358Rat
402433483LOC134481789uncharacterized LOC134481789149557870195581086Rat
1309073Fbxo48F-box protein 48149558249395583950Rat
1308269Plekpleckstrin149559865095631326Rat
402239558LOC134481790uncharacterized LOC134481790149560975095610865Rat
41369426LOC120096673uncharacterized LOC120096673149565434395690757Rat
1308373Cnrip1cannabinoid receptor interacting protein 1149566443595707062Rat
69230Ppp3r1protein phosphatase 3, regulatory subunit B, alpha149575833395808015Rat
402211173LOC134481791uncharacterized LOC134481791149579122995800266Rat
727882Pno1partner of NOB1 homolog149581133595819903Rat
1563863Dnaaf10dynein axonemal assembly factor 10149582027295841449Rat
1560600C1dC1D nuclear receptor corepressor149586255095874796Rat
2323208Hnrnpk-ps1heterogeneous nuclear ribonucleoprotein K, pseudogene 1149595801195959977Rat
41348836LOC120096676uncharacterized LOC120096676149606694196108420Rat
40984137LOC120096862U4 spliceosomal RNA149620059796200671Rat
1560957Etaa1ETAA1 activator of ATR kinase149650089996515617Rat
41018088LOC120096677uncharacterized LOC120096677149655343796558112Rat
402308866LOC134481792uncharacterized LOC134481792149590341795905861Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10102D14Mco2289147969412579694414Ratregion
10772D14Wox15171148627139986271570Ratregion
10773D14Mit10264148627133286271596Ratregion
11086D14Mgh1105148489880084898905Ratregion
34345D14Mgh2134147773802277738156Ratregion
34616D14Mit16137148504208385042220Ratregion
36307D14Rat21131149539691795397048Ratregion
37660D14Rat49163149594395195944114Ratregion
37788D14Rat37240148003135480031594Ratregion
36512D14Rat18153148416497084165123Ratregion
34931D14Rat19162148489828784898449Ratregion
38016D14Rat51195148767441087674605Ratregion
38070D14Rat43216147791483877915054Ratregion
38212D14Rat57210148315346283153672Ratregion
38214D14Rat59203147933230379332506Ratregion
40134D14Rat91162148234860582348767Ratregion
40342D14Rat92164148335485483355018Ratregion
39030D14Rat38206149675544896755654Ratregion
39310D14Rat34231149456198394562214Ratregion
41986D14Arb10253147764007177640324Ratregion
43026D14Rat127230147865284878653078Ratregion
43027D14Rat144136148189313081893266Ratregion
43029D14Rat129207148520455985204766Ratregion
43030D14Rat130220149624229596242515Ratregion
42393D14Rat136228148569652685696754Ratregion
40864D14Rat93218148508164685081864Ratregion
41138D14Rat94271148758182487582095Ratregion
45197D14Got71304148435386684354170Ratregion
45206D14Got62197149056210190562298Ratregion
60078D14Got83214149475616894756382Ratregion
62469D1Uia1151148286391382864064Ratregion
66465D14Mco15249148627134786271596Ratregion
67232D14Arb19214148807136588071579Ratregion
67234D14Arb21194148627137986271573Ratregion
1628905D14Got135199149211594192116140Ratregion
7206268Fgfr3211148121494881215159Ratregion
5038632C86258208147849621178496419Ratregion
5025972RH130406185148496263784962822Ratregion
5026876RH133865191147838373278383923Ratregion
5032393AI852688150148417028284170432Ratregion
5028097X78987160149554578095545940Ratregion
5052023RH94795278148626179386262071Ratregion
5057412AA997364444148032656180327005Ratregion
5052111RH94846153148386672683866879Ratregion
5058674BI284455167148555680385556970Ratregion
5058696BE102313156149566597995666135Ratregion
5057816BI277192714149583897995839693Ratregion
5046684RH131895207147969555579695762Ratregion
5048448RH132909200148216062882160828Ratregion
5042578RH129519410148567947785679887Ratregion
5076844RH139411436148233030282330738Ratregion
5075826RH138819238148543308385433321Ratregion
5078116RH140153213149559876595598978Ratregion
5080412RH141564191149110536591105556Ratregion
5067018AU048014173148139697481397147Ratregion
5067884AU047478313148720124387201556Ratregion
5068424AU047153160149358115593581315Ratregion
5070265RH94567177148404443684044613Ratregion
5060168BF400608129148420579184205920Ratregion
5064614BF399446207148390811383908320Ratregion
5089355AU049107117149367991593680032Ratregion
5084614AA850711540148415955884160098Ratregion
5082217BI274201654148079696380797617Ratregion
5081176RH142009478148127593881276416Ratregion
5090049AU049520257147952883579529092Ratregion
5084554AI409861148148533914185339289Ratregion
5086236AW529690163148331897683319139Ratregion
5081701BF408245146149059356590593711Ratregion
5505484REN75940252148192194881922200Ratregion
5506340UniSTS:478869149147874634478746493Ratregion
5499877UniSTS:235167120147927448079274600Ratregion
5501888MARC_16871-16872:1015445619:1630147993329579933925Ratregion
Position Markers

Flank 1: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
GRCr81477,640,071 - 77,640,324 (+)Marker Load Pipeline
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Peak: (D14Arb10)
Rat AssemblyChrPosition (strand)Source
GRCr81477,640,071 - 77,640,324 (+)Marker Load Pipeline
mRatBN7.21473,415,323 - 73,415,578 (+)MAPPER
Rnor_6.01478,172,765 - 78,173,017NCBI
Rnor_5.01478,146,760 - 78,147,012UniSTS
RGSC_v3.41478,978,644 - 78,978,896UniSTS
Celera1472,367,960 - 72,368,212UniSTS
SHRSP x BN Map1443.03RGD
SHRSP x BN Map1443.03UniSTS
Cytogenetic Map14q21UniSTS
Flank 2: (D14Rat38)
Rat AssemblyChrPosition (strand)Source
GRCr81496,755,448 - 96,755,654 (+)Marker Load Pipeline
mRatBN7.21492,553,886 - 92,554,092 (+)MAPPER
Rnor_6.014102,549,183 - 102,549,388NCBI
Rnor_5.014102,293,972 - 102,294,177UniSTS
RGSC_v3.41499,079,814 - 99,080,020RGD
RGSC_v3.41499,079,815 - 99,080,020UniSTS
Celera1491,586,511 - 91,586,716UniSTS
RGSC_v3.11499,098,960 - 99,099,165RGD
RH 3.4 Map14705.3RGD
RH 3.4 Map14705.3UniSTS
SHRSP x BN Map1463.96UniSTS
SHRSP x BN Map1463.96RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1459848686104848686Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147764007196755654Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1477914838104348525Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143900944484009444Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)147297021087582095Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1462398852107398852Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1460854936105854936Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)1486271332100078267Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147764007196755654Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)146592028399224555Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143802371083023710Rat
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)1496755448100078267Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143802371083023710Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)1484164970100078267Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143067446985041098Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1433424686102238540Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1474255551109089856Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147764007196755654Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143802371083023710Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1477640071100078267Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1474255551109089856Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147764007196755654Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1459848686104848686Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143802371083023710Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144261625899224555Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143941117087582095Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general dexamethasone (DEX) was given in drinking water (0.026mg/ml) for 3 days; OGTT was performed after over-night fasting 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752