Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Depdc5 (DEP domain containing 5, GATOR1 subcomplex subunit) Rattus norvegicus
Analyze
Symbol: Depdc5
Name: DEP domain containing 5, GATOR1 subcomplex subunit
RGD ID: 1311535
Description: Predicted to enable small GTPase binding activity. Predicted to be involved in cellular response to amino acid starvation; negative regulation of TORC1 signaling; and positive regulation of autophagy. Predicted to be located in cytosol; lysosome; and perinuclear region of cytoplasm. Predicted to be part of Cul3-RING ubiquitin ligase complex and GATOR1 complex. Predicted to be active in lysosomal membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy and familial focal epilepsy with variable foci 1. Orthologous to human DEPDC5 (DEP domain containing 5, GATOR1 subcomplex subunit); PARTICIPATES IN mTOR signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DEP domain containing 5; DEP domain-containing protein 5; GATOR complex protein DEPDC5; GATOR1 complex protein DEPDC5; LOC305464
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: Depdc5em1Kyo   Depdc5em2Kyo  
Genetic Models: F344-Depdc5em1Kyo+/- F344-Depdc5em2Kyo+/-
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81481,956,777 - 82,087,392 (-)NCBIGRCr8
mRatBN7.21477,732,297 - 77,862,924 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1477,732,297 - 77,862,794 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1482,174,118 - 82,304,560 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01483,414,227 - 83,544,667 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01479,859,974 - 79,990,406 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01483,089,000 - 83,219,576 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1483,089,000 - 83,219,464 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01483,775,510 - 83,906,381 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41483,484,354 - 83,614,818 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11483,494,440 - 83,629,671 (-)NCBI
Celera1476,647,953 - 76,778,356 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Regulation of mTORC1 by amino acids. Bar-Peled L and Sabatini DM, Trends Cell Biol. 2014 Jul;24(7):400-6. doi: 10.1016/j.tcb.2014.03.003. Epub 2014 Mar 31.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Depdc5 knockout rat: A novel model of mTORopathy. Marsan E, etal., Neurobiol Dis. 2016 May;89:180-9. doi: 10.1016/j.nbd.2016.02.010. Epub 2016 Feb 9.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:17897319   PMID:23542697   PMID:23723238   PMID:25457612   PMID:28199306   PMID:29769719  


Genomics

Comparative Map Data
Depdc5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81481,956,777 - 82,087,392 (-)NCBIGRCr8
mRatBN7.21477,732,297 - 77,862,924 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1477,732,297 - 77,862,794 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1482,174,118 - 82,304,560 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01483,414,227 - 83,544,667 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01479,859,974 - 79,990,406 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01483,089,000 - 83,219,576 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1483,089,000 - 83,219,464 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01483,775,510 - 83,906,381 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41483,484,354 - 83,614,818 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11483,494,440 - 83,629,671 (-)NCBI
Celera1476,647,953 - 76,778,356 (-)NCBICelera
Cytogenetic Map14q21NCBI
DEPDC5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382231,753,968 - 31,908,033 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2231,753,867 - 31,908,033 (+)EnsemblGRCh38hg38GRCh38
GRCh372232,149,954 - 32,304,019 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362230,480,069 - 30,633,001 (+)NCBINCBI36Build 36hg18NCBI36
Build 342230,474,622 - 30,627,554NCBI
Celera2215,950,512 - 16,103,452 (+)NCBICelera
Cytogenetic Map22q12.2-q12.3NCBI
HuRef2215,105,131 - 15,259,327 (+)NCBIHuRef
CHM1_12232,109,512 - 32,262,422 (+)NCBICHM1_1
T2T-CHM13v2.02232,218,011 - 32,372,148 (+)NCBIT2T-CHM13v2.0
Depdc5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39533,020,996 - 33,151,581 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl533,021,045 - 33,151,580 (+)EnsemblGRCm39 Ensembl
GRCm38532,863,646 - 32,994,233 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl532,863,701 - 32,994,236 (+)EnsemblGRCm38mm10GRCm38
MGSCv37533,206,370 - 33,336,882 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36533,180,578 - 33,308,417 (+)NCBIMGSCv36mm8
Celera530,326,971 - 30,470,736 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.35NCBI
Depdc5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554555,881,691 - 6,003,035 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554555,881,631 - 6,005,514 (+)NCBIChiLan1.0ChiLan1.0
DEPDC5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22341,703,209 - 41,859,310 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12244,404,605 - 44,565,771 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02212,774,147 - 12,929,261 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12230,630,110 - 30,781,591 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2230,630,110 - 30,781,578 (+)Ensemblpanpan1.1panPan2
DEPDC5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12624,629,369 - 24,754,728 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2624,630,295 - 24,754,256 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2624,497,751 - 24,623,053 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02625,014,159 - 25,140,999 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2625,015,075 - 25,140,995 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12624,715,227 - 24,840,522 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02624,977,065 - 25,102,363 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02625,039,161 - 25,164,511 (+)NCBIUU_Cfam_GSD_1.0
Depdc5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118117,614,267 - 117,770,284 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936755872,815 - 1,024,057 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936755871,935 - 1,024,538 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DEPDC5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1448,421,880 - 48,523,593 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11448,421,788 - 48,523,530 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21451,687,092 - 51,788,759 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DEPDC5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11914,634,836 - 14,798,050 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1914,635,947 - 14,787,591 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045111,310,353 - 111,477,738 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Depdc5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247478,168,321 - 8,310,457 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247478,169,035 - 8,310,945 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Depdc5
443 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:600
Count of miRNA genes:278
Interacting mature miRNAs:334
Transcripts:ENSRNOT00000067694
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147341532392554092Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147341532392554092Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532392554092Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat

Markers in Region
BI280365  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21477,863,644 - 77,863,825 (+)MAPPERmRatBN7.2
mRatBN7.23163,259,116 - 163,260,557 (+)MAPPERmRatBN7.2
Rnor_6.03172,563,150 - 172,564,590NCBIRnor6.0
Rnor_6.01483,220,339 - 83,220,519NCBIRnor6.0
Rnor_5.01483,907,181 - 83,907,361UniSTSRnor5.0
Rnor_5.03178,609,156 - 178,610,596UniSTSRnor5.0
RGSC_v3.41483,615,693 - 83,615,873UniSTSRGSC3.4
Celera1476,779,231 - 76,779,411UniSTS
Celera3162,432,501 - 162,433,941UniSTS
RH 3.4 Map14514.17UniSTS
Cytogenetic Map14q21UniSTS
RH143825  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21477,804,834 - 77,805,022 (+)MAPPERmRatBN7.2
Rnor_6.01483,161,532 - 83,161,719NCBIRnor6.0
Rnor_5.01483,848,142 - 83,848,329UniSTSRnor5.0
RGSC_v3.41483,556,886 - 83,557,073UniSTSRGSC3.4
Celera1476,720,439 - 76,720,626UniSTS
RH 3.4 Map14520.3UniSTS
Cytogenetic Map14q21UniSTS
BF413401  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21477,748,454 - 77,748,613 (+)MAPPERmRatBN7.2
Rnor_6.01483,105,155 - 83,105,313NCBIRnor6.0
Rnor_5.01483,791,665 - 83,791,823UniSTSRnor5.0
RGSC_v3.41483,500,509 - 83,500,667UniSTSRGSC3.4
Celera1476,664,108 - 76,664,266UniSTS
RH 3.4 Map14517.1UniSTS
Cytogenetic Map14q21UniSTS


Genetic Models
This gene Depdc5 is modified in the following models/strains:
F344-Depdc5em1Kyo+/-     F344-Depdc5em2Kyo+/-    


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001107229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006251277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039091998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063273184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC105515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC109660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000067694   ⟹   ENSRNOP00000061924
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,732,297 - 77,862,770 (-)Ensembl
Rnor_6.0 Ensembl1483,089,000 - 83,219,464 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000085788   ⟹   ENSRNOP00000073874
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,771,278 - 77,862,794 (-)Ensembl
Rnor_6.0 Ensembl1483,091,779 - 83,219,071 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101652   ⟹   ENSRNOP00000086876
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,732,297 - 77,862,770 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112043   ⟹   ENSRNOP00000086641
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,732,297 - 77,859,010 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113787   ⟹   ENSRNOP00000076509
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,732,297 - 77,862,770 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116122   ⟹   ENSRNOP00000078180
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1477,732,297 - 77,840,810 (-)Ensembl
RefSeq Acc Id: NM_001107229   ⟹   NP_001100699
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,956,777 - 82,087,246 (-)NCBI
mRatBN7.21477,732,297 - 77,862,770 (-)NCBI
Rnor_6.01483,089,000 - 83,219,464 (-)NCBI
Rnor_5.01483,775,510 - 83,906,381 (-)NCBI
RGSC_v3.41483,484,354 - 83,614,818 (-)RGD
Celera1476,647,953 - 76,778,356 (-)RGD
Sequence:
RefSeq Acc Id: XM_008770289   ⟹   XP_008768511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,322 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
Rnor_6.01483,091,783 - 83,219,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599211   ⟹   XP_017454700
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,322 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
Rnor_6.01483,091,783 - 83,219,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599212   ⟹   XP_017454701
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,322 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
Rnor_6.01483,091,783 - 83,219,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599213   ⟹   XP_017454702
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,322 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
Rnor_6.01483,091,783 - 83,219,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017599214   ⟹   XP_017454703
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,323 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
Rnor_6.01483,091,783 - 83,219,479 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039091986   ⟹   XP_038947914
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,323 (-)NCBI
mRatBN7.21477,735,078 - 77,862,855 (-)NCBI
RefSeq Acc Id: XM_039091987   ⟹   XP_038947915
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
mRatBN7.21477,735,078 - 77,862,830 (-)NCBI
RefSeq Acc Id: XM_039091988   ⟹   XP_038947916
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,392 (-)NCBI
mRatBN7.21477,735,078 - 77,862,924 (-)NCBI
RefSeq Acc Id: XM_039091989   ⟹   XP_038947917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,263 (-)NCBI
mRatBN7.21477,735,078 - 77,862,792 (-)NCBI
RefSeq Acc Id: XM_039091990   ⟹   XP_038947918
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,367 (-)NCBI
mRatBN7.21477,735,078 - 77,862,904 (-)NCBI
RefSeq Acc Id: XM_039091991   ⟹   XP_038947919
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,284 (-)NCBI
mRatBN7.21477,735,078 - 77,862,823 (-)NCBI
RefSeq Acc Id: XM_039091998   ⟹   XP_038947926
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,075,184 (-)NCBI
mRatBN7.21477,735,078 - 77,850,707 (-)NCBI
RefSeq Acc Id: XM_063273165   ⟹   XP_063129235
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,367 (-)NCBI
RefSeq Acc Id: XM_063273166   ⟹   XP_063129236
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,263 (-)NCBI
RefSeq Acc Id: XM_063273167   ⟹   XP_063129237
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273168   ⟹   XP_063129238
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,392 (-)NCBI
RefSeq Acc Id: XM_063273169   ⟹   XP_063129239
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273170   ⟹   XP_063129240
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273171   ⟹   XP_063129241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,367 (-)NCBI
RefSeq Acc Id: XM_063273172   ⟹   XP_063129242
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273173   ⟹   XP_063129243
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,392 (-)NCBI
RefSeq Acc Id: XM_063273174   ⟹   XP_063129244
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,367 (-)NCBI
RefSeq Acc Id: XM_063273175   ⟹   XP_063129245
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,322 (-)NCBI
RefSeq Acc Id: XM_063273176   ⟹   XP_063129246
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273177   ⟹   XP_063129247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,306 (-)NCBI
RefSeq Acc Id: XM_063273178   ⟹   XP_063129248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,306 (-)NCBI
RefSeq Acc Id: XM_063273180   ⟹   XP_063129250
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273181   ⟹   XP_063129251
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,308 (-)NCBI
RefSeq Acc Id: XM_063273182   ⟹   XP_063129252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,323 (-)NCBI
RefSeq Acc Id: XM_063273183   ⟹   XP_063129253
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
RefSeq Acc Id: XM_063273184   ⟹   XP_063129254
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81481,959,560 - 82,087,307 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001100699 (Get FASTA)   NCBI Sequence Viewer  
  XP_008768511 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454700 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454701 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454702 (Get FASTA)   NCBI Sequence Viewer  
  XP_017454703 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947914 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947915 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947917 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038947926 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129235 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129236 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129237 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129238 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129239 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129240 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129241 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129242 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129243 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129244 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129245 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129246 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129247 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129248 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129250 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129251 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129252 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129253 (Get FASTA)   NCBI Sequence Viewer  
  XP_063129254 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM00137 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000061924.2
  ENSRNOP00000073874.2
  ENSRNOP00000076509.1
  ENSRNOP00000078180.1
  ENSRNOP00000086641.1
  ENSRNOP00000086876.1
RefSeq Acc Id: NP_001100699   ⟸   NM_001107229
- UniProtKB: A6IK73 (UniProtKB/TrEMBL),   A0A8I5Y2I2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008768511   ⟸   XM_008770289
- Peptide Label: isoform X2
- UniProtKB: A0A8I5YBC5 (UniProtKB/TrEMBL),   A0A8I6A1L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454702   ⟸   XM_017599213
- Peptide Label: isoform X10
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454700   ⟸   XM_017599211
- Peptide Label: isoform X5
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454701   ⟸   XM_017599212
- Peptide Label: isoform X7
- UniProtKB: D4A362 (UniProtKB/TrEMBL),   A0A8I6A1L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017454703   ⟸   XM_017599214
- Peptide Label: isoform X13
- UniProtKB: A0A8I6A374 (UniProtKB/TrEMBL),   A0A8I6A1L7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000061924   ⟸   ENSRNOT00000067694
Ensembl Acc Id: ENSRNOP00000073874   ⟸   ENSRNOT00000085788
RefSeq Acc Id: XP_038947916   ⟸   XM_039091988
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947918   ⟸   XM_039091990
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947914   ⟸   XM_039091986
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947915   ⟸   XM_039091987
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947919   ⟸   XM_039091991
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947917   ⟸   XM_039091989
- Peptide Label: isoform X1
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038947926   ⟸   XM_039091998
- Peptide Label: isoform X18
- UniProtKB: A0A8I5Y2I2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000078180   ⟸   ENSRNOT00000116122
Ensembl Acc Id: ENSRNOP00000086641   ⟸   ENSRNOT00000112043
Ensembl Acc Id: ENSRNOP00000086876   ⟸   ENSRNOT00000101652
Ensembl Acc Id: ENSRNOP00000076509   ⟸   ENSRNOT00000113787
RefSeq Acc Id: XP_063129243   ⟸   XM_063273173
- Peptide Label: isoform X7
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   D4A362 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129238   ⟸   XM_063273168
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   A0A8I5YBC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129241   ⟸   XM_063273171
- Peptide Label: isoform X5
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129244   ⟸   XM_063273174
- Peptide Label: isoform X7
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   D4A362 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129235   ⟸   XM_063273165
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   A0A8I5YBC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129252   ⟸   XM_063273182
- Peptide Label: isoform X15
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129245   ⟸   XM_063273175
- Peptide Label: isoform X8
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129251   ⟸   XM_063273181
- Peptide Label: isoform X14
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129237   ⟸   XM_063273167
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   A0A8I5YBC5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129246   ⟸   XM_063273176
- Peptide Label: isoform X9
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129254   ⟸   XM_063273184
- Peptide Label: isoform X17
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129240   ⟸   XM_063273170
- Peptide Label: isoform X4
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129253   ⟸   XM_063273183
- Peptide Label: isoform X16
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129242   ⟸   XM_063273172
- Peptide Label: isoform X6
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129239   ⟸   XM_063273169
- Peptide Label: isoform X3
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129250   ⟸   XM_063273180
- Peptide Label: isoform X12
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129248   ⟸   XM_063273178
- Peptide Label: isoform X11
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129247   ⟸   XM_063273177
- Peptide Label: isoform X10
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063129236   ⟸   XM_063273166
- Peptide Label: isoform X2
- UniProtKB: A0A8I6A1L7 (UniProtKB/TrEMBL),   A0A8I5YBC5 (UniProtKB/TrEMBL)
Protein Domains
DEP   Vacuolar membrane-associated protein Iml1 N-

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K6M8-F1-model_v2 AlphaFold A0A0G2K6M8 1-1591 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699416
Promoter ID:EPDNEW_R9941
Type:initiation region
Name:Depdc5_1
Description:DEP domain containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01483,219,509 - 83,219,569EPDNEW
RGD ID:13699419
Promoter ID:EPDNEW_R9942
Type:multiple initiation site
Name:AC105515_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01483,220,210 - 83,220,270EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311535 AgrOrtholog
BioCyc Gene G2FUF-15245 BioCyc
Ensembl Genes ENSRNOG00000018144 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067694.3 UniProtKB/TrEMBL
  ENSRNOT00000085788.2 UniProtKB/TrEMBL
  ENSRNOT00000101652.1 UniProtKB/TrEMBL
  ENSRNOT00000112043.1 UniProtKB/TrEMBL
  ENSRNOT00000113787.1 UniProtKB/TrEMBL
  ENSRNOT00000116122.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.10 UniProtKB/TrEMBL
InterPro DEP_dom UniProtKB/TrEMBL
  DEPDC5_CTD UniProtKB/TrEMBL
  IML1 UniProtKB/TrEMBL
  IML1_N UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
KEGG Report rno:305464 UniProtKB/TrEMBL
NCBI Gene 305464 ENTREZGENE
PANTHER GATOR COMPLEX PROTEIN DEPDC5 UniProtKB/TrEMBL
  PTHR13179 UniProtKB/TrEMBL
Pfam DEP UniProtKB/TrEMBL
  DEPDC5_CTD UniProtKB/TrEMBL
  DUF3608 UniProtKB/TrEMBL
  IML1_N UniProtKB/TrEMBL
PhenoGen Depdc5 PhenoGen
PROSITE DEP UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018144 RatGTEx
SMART DEP UniProtKB/TrEMBL
Superfamily-SCOP SSF46785 UniProtKB/TrEMBL
UniProt A0A0G2K6M8_RAT UniProtKB/TrEMBL
  A0A8I5Y2I2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5YBC5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A1L7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A374 ENTREZGENE, UniProtKB/TrEMBL
  A6IK73 ENTREZGENE, UniProtKB/TrEMBL
  D4A362 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-09-13 Depdc5  DEP domain containing 5, GATOR1 subcomplex subunit  Depdc5  DEP domain containing 5, GATOR1 subcomplex subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2019-09-13 Depdc5  DEP domain containing 5, GATOR1 subcomplex subunit  Depdc5  DEP domain containing 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Depdc5  DEP domain containing 5   Depdc5_predicted  DEP domain containing 5 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Depdc5_predicted  DEP domain containing 5 (predicted)      Symbol and Name status set to approved 70820 APPROVED