Qdpr (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 69,882,776 - 69,896,378 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 65,670,251 - 65,683,853 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 65,670,131 - 65,683,854 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 70,063,070 - 70,076,654 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 71,350,269 - 71,363,871 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 67,773,459 - 67,787,043 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 70,164,682 - 70,178,284 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 70,164,650 - 70,178,284 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 70,207,866 - 70,221,468 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 70,741,998 - 70,755,600 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 70,744,388 - 70,757,991 (+) | NCBI | | | | | Celera | 14 | 64,651,352 - 64,664,952 (+) | NCBI | | Celera | | | RH 3.4 Map | 14 | 474.3 | RGD | | | | | Cytogenetic Map | 14 | q11 | NCBI | | | | |
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QDPR (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 17,486,395 - 17,512,090 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 17,460,261 - 17,512,206 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 17,488,018 - 17,513,713 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 17,097,121 - 17,154,822 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 17,164,291 - 17,189,982 | NCBI | | | | | Celera | 4 | 17,953,005 - 17,978,851 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | p15.32 | NCBI | | | | | HuRef | 4 | 16,842,683 - 16,868,527 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 17,485,950 - 17,511,774 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 17,468,141 - 17,493,839 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Qdpr (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 45,591,374 - 45,607,571 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 45,591,363 - 45,607,578 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 45,434,032 - 45,450,229 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 45,434,021 - 45,450,236 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 45,825,271 - 45,841,468 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 45,722,303 - 45,738,405 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 42,859,912 - 42,876,126 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | B3 | NCBI | | | | | cM Map | 5 | 24.9 | NCBI | | | | |
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Qdpr (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955480 | 6,646,088 - 6,669,526 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955480 | 6,646,088 - 6,666,866 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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QDPR (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 17,748,236 - 17,773,952 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 17,945,618 - 17,971,298 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 11,906,439 - 11,932,311 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 17,199,772 - 17,225,667 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 17,199,772 - 17,225,667 (-) | Ensembl | panpan1.1 | | panPan2 | |
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QDPR (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 3 | 62,970,850 - 62,987,512 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 3 | 62,970,121 - 63,028,395 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 3 | 65,486,672 - 65,503,339 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 3 | 63,445,733 - 63,462,419 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 3 | 63,444,950 - 63,462,417 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 3 | 62,936,851 - 62,953,518 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 3 | 63,140,819 - 63,157,481 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 3 | 63,500,293 - 63,516,958 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Qdpr (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405285 | 56,985,664 - 57,006,322 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936477 | 10,687,276 - 10,708,031 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936477 | 10,687,328 - 10,708,015 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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QDPR (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 12,529,512 - 12,549,603 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 12,529,500 - 12,549,471 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 12,332,191 - 12,351,742 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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QDPR (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 27 | 32,697,582 - 32,723,616 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 27 | 32,697,599 - 32,723,016 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 79,429,420 - 79,455,598 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Qdpr (Heterocephalus glaber - naked mole-rat) |
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