LOC120096544 (uncharacterized LOC120096544) - Rat Genome Database

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Gene: LOC120096544 (uncharacterized LOC120096544) Rattus norvegicus
Analyze
Symbol: LOC120096544
Name: uncharacterized LOC120096544
RGD ID: 41322972
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814103,096,994 - 103,106,224 (+)NCBIGRCr8
mRatBN7.21498,895,913 - 98,905,183 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC120096544
62 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_005493054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_005493054
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr814103,096,994 - 103,106,224 (+)NCBI
mRatBN7.21498,895,913 - 98,905,183 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14744 BioCyc
NCBI Gene LOC120096544 ENTREZGENE
PhenoGen LOC120096544 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120096544  uncharacterized LOC120096544      Symbol and Name status set to provisional 70820 PROVISIONAL