LOC120096689 (uncharacterized LOC120096689) - Rat Genome Database

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Gene: LOC120096689 (uncharacterized LOC120096689) Rattus norvegicus
Analyze
Symbol: LOC120096689
Name: uncharacterized LOC120096689
RGD ID: 41014016
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein LOC120096689
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81499,260,617 - 99,295,433 (-)NCBIGRCr8
mRatBN7.21495,059,248 - 95,114,522 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map14q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC120096689
541 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1470053989104886043Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1470053989104886043Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147341532395876975Rat
631213Bw60Body weight QTL604.51retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)147995092195876975Rat
4889951Bss92Bone structure and strength QTL 923.9tibia area (VT:1000281)tibia-fibula cortical bone total cross-sectional area (CMO:0001721)148205747195876975Rat
1582201Sffal2Serum free fatty acids level QTL 240.0002blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)149255388695876975Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_039092875   ⟹   XP_038948803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,295,414 (-)NCBI
mRatBN7.21495,071,517 - 95,114,522 (-)NCBI
RefSeq Acc Id: XR_010057613
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,294,140 (-)NCBI
RefSeq Acc Id: XR_010057614
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,294,140 (-)NCBI
RefSeq Acc Id: XR_010057615
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,295,414 (-)NCBI
RefSeq Acc Id: XR_010057616
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,265,201 - 99,294,140 (-)NCBI
RefSeq Acc Id: XR_010057617
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,294,140 (-)NCBI
RefSeq Acc Id: XR_010057618
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,272,858 - 99,295,433 (-)NCBI
RefSeq Acc Id: XR_010057619
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81499,260,617 - 99,294,140 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038948803 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_038948803   ⟸   XM_039092875


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14842 BioCyc
NCBI Gene LOC120096689 ENTREZGENE
PhenoGen LOC120096689 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-26 LOC120096689  uncharacterized LOC120096689      Symbol and Name status set to provisional 70820 PROVISIONAL