Cbll1-ps1 (Cbl proto-oncogene like 1, pseudogene 1) - Rat Genome Database

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Gene: Cbll1-ps1 (Cbl proto-oncogene like 1, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Cbll1-ps1
Name: Cbl proto-oncogene like 1, pseudogene 1
RGD ID: 2319286
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: Casitas B-lineage lymphoma-like 1-like; LOC100361892
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81474,096,822 - 74,098,292 (-)NCBIGRCr8
mRatBN7.21469,884,450 - 69,885,920 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01474,529,999 - 74,531,469 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01474,527,739 - 74,529,209 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41475,070,001 - 75,071,471 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1468,801,792 - 68,803,262 (-)NCBICelera
Cytogenetic Map14q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Cbll1-ps1
15 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1455624247100624247Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1455147478100147478Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143999825175582726Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)146875779683368335Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)144079346098037301Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1458184885103184885Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1456631369101631369Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1455624247100624247Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144226252995023211Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)145002321195023211Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_003751381   ⟹   XP_003751429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.01474,527,739 - 74,529,209 (-)NCBI
RefSeq Acc Id: XM_003752757   ⟹   XP_003752805
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1468,801,792 - 68,803,262 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-15459 BioCyc
NCBI Gene 100361892 ENTREZGENE
PhenoGen Cbll1-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Cbll1-ps1  Cbl proto-oncogene like 1, pseudogene 1  LOC100361892  Casitas B-lineage lymphoma-like 1-like  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100361892  Casitas B-lineage lymphoma-like 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL