Ppat (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 31,570,010 - 31,604,410 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 31,215,741 - 31,250,144 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 31,216,165 - 31,250,144 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 31,593,072 - 31,627,368 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 32,901,403 - 32,935,708 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 31,386,077 - 31,420,375 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 33,580,541 - 33,614,919 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 33,580,541 - 33,614,919 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 33,371,454 - 33,405,854 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 33,509,364 - 33,543,743 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 33,509,363 - 33,543,743 (+) | NCBI | | | | | Celera | 14 | 30,529,492 - 30,563,868 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | p11 | NCBI | | | | |
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PPAT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 56,393,362 - 56,435,615 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 56,393,362 - 56,435,615 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 57,259,528 - 57,301,781 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 56,954,285 - 56,996,602 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 57,100,458 - 57,142,773 | NCBI | | | | | Celera | 4 | 54,765,911 - 54,808,216 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q12 | NCBI | | | | | HuRef | 4 | 53,213,663 - 53,255,937 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 57,294,641 - 57,336,915 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 59,881,364 - 59,923,605 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ppat (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 77,061,096 - 77,099,425 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 77,061,096 - 77,099,425 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 76,913,249 - 76,951,578 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 76,913,249 - 76,951,578 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 77,342,274 - 77,380,603 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 77,987,920 - 78,026,353 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 74,190,125 - 74,219,445 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | C3.3 | NCBI | | | | | cM Map | 5 | 41.45 | NCBI | | | | |
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Ppat (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955447 | 14,574,407 - 14,607,416 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955447 | 14,552,846 - 14,607,416 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PPAT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 73,347,602 - 73,390,036 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 73,553,280 - 73,595,555 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 67,491,407 - 67,533,822 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 74,059,967 - 74,102,002 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 74,059,966 - 74,102,002 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PPAT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 13 | 48,618,460 - 48,656,164 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 48,620,714 - 48,655,780 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 48,509,175 - 48,546,691 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 49,233,071 - 49,270,374 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 49,207,789 - 49,270,306 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 48,904,984 - 48,942,482 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 48,433,951 - 48,471,441 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 49,380,077 - 49,417,387 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ppat (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405285 | 27,649,519 - 27,693,748 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936482 | 18,606,124 - 18,648,681 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936482 | 18,606,124 - 18,648,989 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PPAT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 8 | 55,654,377 - 55,701,077 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 55,652,194 - 55,701,077 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 57,820,418 - 57,896,880 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PPAT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 7 | 12,201,434 - 12,242,418 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 12,191,784 - 12,243,488 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666066 | 12,869,154 - 12,912,322 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ppat (Heterocephalus glaber - naked mole-rat) |
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