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Gene: Gata1 (GATA binding protein 1) Rattus norvegicus
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Symbol: Gata1
Name: GATA binding protein 1
RGD ID: 2663
Description: Exhibits chromatin binding activity and sequence-specific DNA binding activity. Involved in several processes, including Sertoli cell development; cellular response to cAMP; and cellular response to follicle-stimulating hormone stimulus. Localizes to nucleus. Biomarker of mental depression. Human ortholog(s) of this gene implicated in Down syndrome; X-linked thrombocytopenia with beta-thalassemia; beta thalassemia; and bone marrow cancer (multiple). Orthologous to human GATA1 (GATA binding protein 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Eryf1; erythroid transcription factor; GATA-1; GATA-binding factor 1; GATA-binding protein 1 (globin transcription factor 1); GF-1; NF-E1 DNA-binding protein
Orthologs:
Homo sapiens (human) : GATA1 (GATA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Gata1 (GATA binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gata1 (GATA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GATA1 (GATA binding protein 1)
Canis lupus familiaris (dog) : GATA1 (GATA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gata1 (GATA binding protein 1)
Sus scrofa (pig) : GATA1 (GATA binding protein 1)
Chlorocebus sabaeus (African green monkey) : GATA1 (GATA binding protein 1)
Heterocephalus glaber (naked mole-rat) : Gata1 (GATA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X15,273,937 - 15,281,759 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX15,378,789 - 15,382,066 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X16,054,178 - 16,062,000 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,564,259 - 26,572,081 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X26,617,727 - 26,625,550 (+)NCBI
CeleraX14,614,331 - 14,622,295 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Gata1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2663
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.