GATA1 (GATA binding protein 1) - Rat Genome Database

Name: GATA1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: GATA1 (GATA binding protein 1) Canis lupus familiaris

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Symbol:

GATA1

Name:

GATA binding protein 1

RGD ID:

12318317

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); bone mineralization (ortholog); cell development (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); Altitude Sickness (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); protein-DNA complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

erythroid transcription factor

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GATA1 (GATA binding protein 1)	HGNC	EggNOG, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL
Mus musculus (house mouse):	Gata1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Gata1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gata1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GATA1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gata1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GATA1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GATA1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gata1 (GATA binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	41,991,321 - 41,998,319 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	41,971,582 - 41,998,303 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,366,765 - 16,373,724 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	42,127,527 - 42,134,488 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	42,127,523 - 42,134,481 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	42,113,779 - 42,120,737 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	42,102,035 - 42,108,995 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	42,196,190 - 42,203,150 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute megakaryocytic leukemia (ISO)

acute myeloid leukemia (ISO)

Altitude Sickness (ISO)

anemia (ISO)

autistic disorder (ISO)

beta thalassemia (ISO)

clear cell renal cell carcinoma (ISO)

colon adenocarcinoma (ISO)

colorectal cancer (ISO)

congenital disorder of glycosylation type IIm (ISO)

congenital hypoplastic anemia (ISO)

Congenital Nonspherocytic Hemolytic Anemia 9 (ISO)

cutaneous porphyria (ISO)

depressive disorder (ISO)

Diamond-Blackfan anemia (ISO)

Down syndrome (ISO)

Familial Myelofibrosis (ISO)

Fibrosis (ISO)

genetic disease (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

lung cancer (ISO)

major depressive disorder (ISO)

myelodysplastic syndrome (ISO)

myelofibrosis (ISO)

myeloid leukemia (ISO)

myeloid leukemia associated with Down Syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

polycythemia (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

thrombocytopenia (ISO)

Thrombocytopenia 1 (ISO)

transient myeloproliferative syndrome (ISO)

Wiskott-Aldrich syndrome (ISO)

X-linked dyserythropoietic anemia (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

X-linked thrombocytopenia with beta-thalassemia (ISO)

X-Linked Thrombocytopenia, with or without Dyserythropoietic Anemia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ regeneration (ISO)

basophil differentiation (IEA)

bone mineralization (IEA,ISO)

cell development (IEA,ISO)

cell population proliferation (IEA,ISO)

cell-cell signaling (IEA,ISO)

cellular response to cAMP (ISO)

cellular response to follicle-stimulating hormone stimulus (ISO)

cellular response to lipopolysaccharide (ISO)

dendritic cell differentiation (IEA,ISO)

embryonic hemopoiesis (IEA,ISO)

eosinophil differentiation (IEA)

eosinophil fate commitment (IEA)

erythrocyte development (IEA)

erythrocyte differentiation (IEA,ISO)

homeostasis of number of cells within a tissue (IEA,ISO)

in utero embryonic development (IEA,ISO)

male gonad development (IEA)

megakaryocyte differentiation (IEA,ISO)

myeloid cell apoptotic process (IEA,ISO)

myeloid cell differentiation (IEA,ISO)

negative regulation of apoptotic process (IEA)

negative regulation of bone mineralization (IEA,ISO)

negative regulation of cell population proliferation (IEA,ISO)

negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (IEA)

negative regulation of myeloid cell apoptotic process (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

osteoblast proliferation (IEA,ISO)

platelet aggregation (IEA)

platelet formation (IEA,ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of DNA-templated transcription (IEA)

positive regulation of erythrocyte differentiation (IEA)

positive regulation of mast cell degranulation (ISO)

positive regulation of osteoblast proliferation (IEA,ISO)

positive regulation of peptidyl-tyrosine phosphorylation (IEA)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

primitive erythrocyte differentiation (IEA,ISO)

regulation of definitive erythrocyte differentiation (IEA)

regulation of DNA-templated transcription (IEA)

regulation of glycoprotein biosynthetic process (IEA)

regulation of primitive erythrocyte differentiation (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

Sertoli cell development (ISO)

transcription by RNA polymerase II (IEA,ISO)

Cellular Component

nucleoplasm (IEA)

nucleus (IEA)

protein-DNA complex (IEA)

transcription regulator complex (IEA)

transcription repressor complex (IEA)

Molecular Function

C2H2 zinc finger domain binding (IEA)

chromatin binding (IEA,ISO)

chromatin DNA binding (IEA)

cis-regulatory region sequence-specific DNA binding (IEA)

DNA binding (IEA,ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (IEA)

p53 binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IEA)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA)

sequence-specific DNA binding (IEA,ISO)

sequence-specific double-stranded DNA binding (IEA)

transcription cis-regulatory region binding (IEA)

transcription coactivator binding (IEA)

transcription coregulator binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GATA1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	41,991,321 - 41,998,319 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	41,971,582 - 41,998,303 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,366,765 - 16,373,724 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	42,127,527 - 42,134,488 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	42,127,523 - 42,134,481 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	42,113,779 - 42,120,737 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	42,102,035 - 42,108,995 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	42,196,190 - 42,203,150 (+)	NCBI		UU_Cfam_GSD_1.0

GATA1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	48,786,590 - 48,794,311 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	48,786,540 - 48,794,311 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	48,644,998 - 48,652,718 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	48,529,906 - 48,537,662 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	48,401,209 - 48,408,964	NCBI
Celera	X	53,010,810 - 53,018,547 (-)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	46,304,230 - 46,311,086 (+)	NCBI		HuRef
CHM1_1	X	48,676,125 - 48,683,862 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	48,197,083 - 48,204,804 (+)	NCBI		T2T-CHM13v2.0

Gata1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	7,825,504 - 7,842,844 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	7,825,499 - 7,844,310 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	7,959,260 - 7,976,663 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	7,959,260 - 7,978,071 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	7,536,386 - 7,544,941 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	7,116,219 - 7,124,774 (-)	NCBI		MGSCv36	mm8
Celera	X	3,501,753 - 3,509,992 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	3.59	NCBI

Gata1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	17,193,291 - 17,209,462 (+)	NCBI		GRCr8
mRatBN7.2	X	14,529,706 - 14,537,530 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,529,702 - 14,537,530 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,343,293 - 19,351,113 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,732,001 - 20,739,823 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	16,997,169 - 17,004,991 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,273,937 - 15,281,759 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,378,789 - 15,382,066 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,273,933 - 15,281,759 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	16,054,178 - 16,062,000 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,564,259 - 26,572,081 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	26,617,727 - 26,625,550 (+)	NCBI
Celera	X	14,614,331 - 14,622,295 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

Gata1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955543	334,061 - 342,061 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955543	334,581 - 342,042 (+)	NCBI	ChiLan1.0	ChiLan1.0

GATA1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	50,280,196 - 50,283,660 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	50,283,568 - 50,287,032 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	41,088,724 - 41,092,190 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	48,945,394 - 48,953,126 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	48,945,394 - 48,953,126 (+)	Ensembl	panpan1.1		panPan2

Gata1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	34,488,565 - 34,510,496 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936721	742,862 - 750,768 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936721	742,862 - 750,843 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GATA1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	42,898,442 - 42,905,976 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	42,898,431 - 42,905,939 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	47,745,326 - 47,752,876 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GATA1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	45,912,638 - 45,920,415 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	45,917,231 - 45,920,268 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,392,674 - 11,400,428 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gata1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	595,967 - 602,979 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	595,948 - 602,980 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GATA1
29 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005641330	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038449959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038523408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038587377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038651890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_538026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000024680 ⟹ ENSCAFP00000022898

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	41,971,582 - 41,998,303 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845054929 ⟹ ENSCAFP00845043195

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	X	42,127,523 - 42,134,481 (+)	Ensembl

RefSeq Acc Id:

XM_038449959 ⟹ XP_038305887

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	X	42,127,527 - 42,134,488 (+)	NCBI

RefSeq Acc Id:

XM_038523408 ⟹ XP_038379336

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	X	42,113,779 - 42,120,737 (+)	NCBI

RefSeq Acc Id:

XM_038587377 ⟹ XP_038443305

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	X	42,196,190 - 42,203,150 (+)	NCBI

RefSeq Acc Id:

XM_038651890 ⟹ XP_038507818

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	X	42,102,035 - 42,108,995 (+)	NCBI

RefSeq Acc Id:

XM_538026 ⟹ XP_538026

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	41,991,322 - 41,998,319 (+)	NCBI
Dog10K_Boxer_Tasha	X	16,366,765 - 16,373,724 (+)	NCBI

Sequence:

show sequence

AGGGGAGGGAGGGAGGGAAGGAGGAAGGGAACCTCAAAGGCCAAGGCCAGCCAGGACACCCCCT
GGGATCACACTGAACTCGCCACATCCCCAACGCGGCCGAACCCTCTGCGCCAACAAGCCCAGGT
CATACCCGAGGCCCCATGGAGTTCCCTGGCCTAGGGGCCCTGGGGACCTCGGAGCCCCTGCCCC
AGTTTGTGGACCCGGCCTTGGTATCGTCACCACCGGAGTCGGGGGTCTTCTTCCCCTCTGGGCC
AGAGGGCTTGGATGCAGCAGCCTCCTCCACGGCCCCCAGCACGGCCACGGCCGCAGCGGCTCTG
GCCTACTACAGGGATGCCGAAGCCTACAGGCACTCCCCAGTCTTTCAGGTGTACCCACTGCTCA
ACTGCATGGAGGGGATCCCAGGGGGCTCACCGTACACTGGCTGGACCTACGGCAAGACAGGGCT
CTACCCTGCCTCGACTGTGTGCCCCACCCGCGAGGACTCCCCTCCCCAGGCCCCAGAAGACCCA
GATGGGAAAGGCGGCAGCAGCTTCCTGGAGACCTTAAAGACAGAGCGGCTAAGTCCAGATCTCT
TGACGCTGGGGCCTGCACTGCCTTCATCAATCCCTGTCCCCAGCAGTGCCTACGGGGGTCCTGA
CTTTTCCAGTACCTTCTTTTCTCCCACCGGGAGCCCCCTCAATCCAGCGGCCTATTCCTCCCCC
AAGCTTCGTGGAACACTGCCCTTGCCCCCCTGCGAGGCCAGGGAATGTGTAAACTGCGGAGCAA
CAGCCACTCCACTGTGGCGGCGGGACAGGACGGGCCACTACCTATGCAATGCCTGTGGCCTCTA
TCACAAGATGAATGGGCAGAACAGGCCCCTCATCCGGCCCAAGAAGCGCCTGATTGTCAGCAAA
CGGGCAGGTACTCAGTGCACCAACTGCCAGACAACCACCACGACACTGTGGCGGAGAAATGCCA
GTGGGGACCCTGTGTGTAATGCCTGTGGCCTCTACTACAAGCTACACCAGGTGAACCGGCCACT
GACCATGCGGAAGGATGGTATACAGACTCGAAACCGCAAGGCATCTGGAAAAGGGAAAAAGAAA
CGAGGGTCAAGTCTGGGAGGTACAGGAGGAGCTGAAGGACCGGCTGGTGGCTTCATGGTGGTGG
CTGGGAGCAGCGGGAGTGGGAATTGTGGCGAGGTGGCCTCAAGCTTGACATTGGGCCCGCCCAG
TACTGCCCATCTCTATCAAGGCCTGGGCCCCGTGGTGCTGTCGGGGCCTGTTAGCCACCTCATG
CCTTTCCCAGGACCCCTCTTGGGGTCCTCCGCCAGCTCCTTTCCCACAGGTCCTGTTCCTCCCA
CCACCACCACCACTGTGGTGGCTCCACTCAGCTCCTGAGGGCACAGAGCATGGCCTCAGGGCAG
GAGGGTGGGGTCCCTCTCCTATGTAGCCAGCAGTCTGTACCACCCCACCCTCTGGGCCCCAGCC
ATCCCTTGGCCTGGATCTTCAAAGATTTTTGTAAAATAAAACCACCAAAGTCCTGAAAGCAGAG
GCATAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038305887	(Get FASTA)	NCBI Sequence Viewer
	XP_038379336	(Get FASTA)	NCBI Sequence Viewer
	XP_038443305	(Get FASTA)	NCBI Sequence Viewer
	XP_038507818	(Get FASTA)	NCBI Sequence Viewer
	XP_538026	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000022898.4
	ENSCAFP00030013301.1
	ENSCAFP00040014522.1
	ENSCAFP00845043195
	ENSCAFP00845043195.1

RefSeq Acc Id:

XP_538026 ⟸ XM_538026

- UniProtKB:

A0A8C0S1L4 (UniProtKB/TrEMBL), A0A8C0LB17 (UniProtKB/TrEMBL), A0A8I3QVV2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEFPGLGALGTSEPLPQFVDPALVSSPPESGVFFPSGPEGLDAAASSTAPSTATAAAALAYYRD
AEAYRHSPVFQVYPLLNCMEGIPGGSPYTGWTYGKTGLYPASTVCPTREDSPPQAPEDPDGKGG
SSFLETLKTERLSPDLLTLGPALPSSIPVPSSAYGGPDFSSTFFSPTGSPLNPAAYSSPKLRGT
LPLPPCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTQ
CTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKKKRGSSL
GGTGGAEGPAGGFMVVAGSSGSGNCGEVASSLTLGPPSTAHLYQGLGPVVLSGPVSHLMPFPGP
LLGSSASSFPTGPVPPTTTTTVVAPLSS

hide sequence

Ensembl Acc Id:

ENSCAFP00000022898 ⟸ ENSCAFT00000024680

RefSeq Acc Id:

XP_038379336 ⟸ XM_038523408

RefSeq Acc Id:

XP_038507818 ⟸ XM_038651890

RefSeq Acc Id:	XP_038305887 ⟸ XM_038449959
- UniProtKB:	A0A8C0S1L4 (UniProtKB/TrEMBL), A0A8C0LB17 (UniProtKB/TrEMBL), A0A8I3QVV2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038443305 ⟸ XM_038587377
- UniProtKB:	A0A8C0LB17 (UniProtKB/TrEMBL), A0A8C0S1L4 (UniProtKB/TrEMBL), A0A8I3QVV2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845043195 ⟸ ENSCAFT00845054929

Protein Domains

GATA-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000015572	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030008280	UniProtKB/TrEMBL
	ENSCAFG00040009001	UniProtKB/TrEMBL
	ENSCAFG00845030905	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000024680.5	UniProtKB/TrEMBL
	ENSCAFT00030015257.1	UniProtKB/TrEMBL
	ENSCAFT00040016752.1	UniProtKB/TrEMBL
	ENSCAFT00845054929	ENTREZGENE
	ENSCAFT00845054929.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.50.10	UniProtKB/TrEMBL
InterPro	Transcription_factor_GATA	UniProtKB/TrEMBL
	Znf_GATA	UniProtKB/TrEMBL
	Znf_NHR/GATA	UniProtKB/TrEMBL
KEGG Report	cfa:480906	UniProtKB/TrEMBL
NCBI Gene	GATA1	ENTREZGENE
PANTHER	PTHR10071	UniProtKB/TrEMBL
	PTHR10071:SF190	UniProtKB/TrEMBL
Pfam	GATA	UniProtKB/TrEMBL
PRINTS	GATAZNFINGER	UniProtKB/TrEMBL
PROSITE	GATA_ZN_FINGER_1	UniProtKB/TrEMBL
	GATA_ZN_FINGER_2	UniProtKB/TrEMBL
SMART	ZnF_GATA	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
UniProt	A0A8C0LB17	ENTREZGENE
	A0A8C0S1L4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QVV2	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:111507	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

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