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Gene: Elk1 (ETS transcription factor ELK1) Rattus norvegicus
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Symbol: Elk1
Name: ETS transcription factor ELK1
Description: Exhibits RNA polymerase II proximal promoter sequence-specific DNA binding activity and chromatin binding activity. Involved in several processes, including cellular response to gamma radiation; cellular response to testosterone stimulus; and positive regulation of neuron death. Localizes to several cellular components, including the axon terminus; dendrite; and neuronal cell body. Biomarker of transient cerebral ischemia. Orthologous to human ELK1 (ETS transcription factor ELK1); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; INTERACTS WITH (R)-noradrenaline; (S)-amphetamine; (S)-nicotine.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: ELK1, ETS transcription factor; ELK1, member of ETS oncogene family; ETS domain-containing protein Elk-1
Orthologs:
Homo sapiens (human) : ELK1 (ETS transcription factor ELK1)  HGNC  Alliance
Mus musculus (house mouse) : Elk1 (ELK1, member of ETS oncogene family)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Elk1 (ETS transcription factor ELK1)
Pan paniscus (bonobo/pygmy chimpanzee) : ELK1 (ETS transcription factor ELK1)
Canis lupus familiaris (dog) : ELK1 (ETS transcription factor ELK1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Elk1 (ETS transcription factor ELK1)
Sus scrofa (pig) : ELK1 (ETS transcription factor ELK1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X1,287,875 - 1,304,822 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX1,297,099 - 1,304,822 (+)Ensembl
Rnor_5.0X2,102,893 - 2,119,843 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X12,597,863 - 12,604,248 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX1,708,719 - 1,724,604 (+)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Elk1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1598663
Created: 2006-12-10
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.