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Gene: Sdr16c5 (short chain dehydrogenase/reductase family 16C, member 5) Rattus norvegicus
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Symbol: Sdr16c5
Name: short chain dehydrogenase/reductase family 16C, member 5
Description: Predicted to have activating transcription factor binding activity; retinol dehydrogenase activity; and transcription corepressor activity. Predicted to be involved in several processes, including keratinocyte proliferation; regulation of histone modification; and retinoid metabolic process. Predicted to colocalize with chromatin; endoplasmic reticulum; and plasma membrane. Orthologous to human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5); INTERACTS WITH bisphenol A; cadmium dichloride; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: epidermal retinal dehydrogenase 2; epidermal retinol dehydrogenase 2; LOC297805; Rdhe2; retinal short chain dehydrogenase reductase 2; RGD1565999; similar to short chain dehydrogenase reductase 9
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0516,904,926 - 16,930,111 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl516,904,926 - 16,930,075 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0521,681,674 - 21,706,737 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4517,339,715 - 17,361,781 (-)NCBIRGSC3.4rn4RGSC3.4
Celera516,384,689 - 16,406,286 (-)NCBICelera
Cytogenetic Map5q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sdr16c5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565999
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.