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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA damage response
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Accession:GO:0006974 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
Synonyms:exact_synonym: cellular DNA damage response;   cellular response to DNA damage stimulus;   response to genotoxic stress
 broad_synonym: response to DNA damage stimulus
 alt_id: GO:0034984


show annotations for term's descendants           Sort by:
DNA damage response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA (PMID:15657060) UniProt PMID:15657060 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G AC087632.2 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr15:64,181,180...64,381,440 JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IDA (PMID:26943039) UniProt PMID:26943039 NCBI chr 9:19,409,009...19,452,505
Ensembl chr 9:19,409,009...19,452,505 		JBrowse link
G AEN apoptosis enhancing nuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr15:88,604,683...88,632,281
Ensembl chr15:88,621,337...88,632,281 		JBrowse link
G AIM2 absent in melanoma 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:159,055,051...159,147,132
Ensembl chr 1:159,061,599...159,187,843 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751 		JBrowse link
G ALKBH7 alkB homolog 7 involved_in IDA
IEA		 (PMID:23666923) UniProt
InterPro		 PMID:23666923 GO_REF:0000002 NCBI chr19:6,372,794...6,375,250
Ensembl chr19:6,372,794...6,375,250 		JBrowse link
G ALKBH8 alkB homolog 8, tRNA methyltransferase involved_in IDA (PMID:20308323) UniProt PMID:20308323 NCBI chr11:107,502,727...107,565,735
Ensembl chr11:107,502,727...107,565,742 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in
NOT|involved_in		 IDA
ISO		 (PMID:22399800)
(MGI:5800654|PMID:27010503)		 UniProt
UniProt		 PMID:22399800 PMID:27010503 MGI:5800654 NCBI chr19:17,281,901...17,287,646
Ensembl chr19:17,281,645...17,287,646 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in IEA
IDA		 (PMID:18468999) UniProt PMID:18468999 GO_REF:0000043 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,125...6,419,414 		JBrowse link
G APC APC regulator of WNT signaling pathway involved_in IDA (PMID:14728717) UniProt PMID:14728717 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,518...112,846,239 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IDA (PMID:17396150) UniProt PMID:17396150 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G ARMT1 acidic residue methyltransferase 1 involved_in IEA
IBA
IMP		 (PMID:25732820) UniProt
GO_Central		 PMID:25732820 GO_REF:0000033 GO_REF:0000043 NCBI chr 6:151,452,466...151,470,101
Ensembl chr 6:151,452,258...151,470,101 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171 		JBrowse link
G ASH2L ASH2 like, histone lysine methyltransferase complex subunit acts_upstream_of_or_within IDA (PMID:17500065) MGI PMID:17500065 NCBI chr 8:38,105,493...38,140,080
Ensembl chr 8:38,105,493...38,144,076 		JBrowse link
G ATAD3A ATPase family AAA domain containing 3A involved_in IDA (PMID:37832546) UniProt PMID:37832546 NCBI chr 1:1,512,162...1,534,685
Ensembl chr 1:1,512,162...1,534,685 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) UniProt
MGI
Ensembl		 PMID:15983387 GO_REF:0000043 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA
IDA
IMP		 (PMID:22304920)
(PMID:15916964)		 UniProt
Ensembl		 PMID:15916964 PMID:22304920 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
IDA
ISO
IMP		 (PMID:16213212), (PMID:24534091), (PMID:30952868), (PMID:38128537), (PMID:9733515)
(PMID:15790808), (PMID:17875758)
(PMID:24550317)		 Ensembl
UniProt
InterPro
RGD
MGI		 PMID:9733515 PMID:12915485 PMID:15790808 PMID:16213212 PMID:17875758 More... GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:10053571 RGD:1599370 RGD:2316101 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATMIN ATM interactor involved_in IEA UniProt GO_REF:0000043 NCBI chr16:81,035,842...81,047,350
Ensembl chr16:81,035,842...81,047,350 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 TAS
ISO
IDA		 (PMID:15538388)
(PMID:15983387)
(PMID:11673449), (PMID:27723717), (PMID:27723720), (PMID:37788673), (PMID:37832547)		 UniProt
MGI		 PMID:11673449 PMID:15538388 PMID:15983387 PMID:27723717 PMID:27723720 More... NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEP (PMID:7826398) UniProt PMID:7826398 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 involved_in NAS (PMID:15905410), (PMID:16651405) ComplexPortal PMID:15905410 PMID:16651405 NCBI chr 2:214,725,646...214,809,683
Ensembl chr 2:214,725,646...214,809,683 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:75,522,469...75,546,992
Ensembl chr14:75,522,455...75,546,993 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12952892)
(PMID:9454845)		 Ensembl
MGI		 PMID:9454845 PMID:12952892 GO_REF:0000107 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G BAZ1B bromodomain adjacent to zinc finger domain 1B involved_in IEA
IBA
NAS
IDA		 (PMID:19092802) UniProt
GO_Central
ComplexPortal		 PMID:19092802 GO_REF:0000033 GO_REF:0000043 NCBI chr 7:73,440,406...73,522,293
Ensembl chr 7:73,440,406...73,522,293 		JBrowse link
G BBC3 BCL2 binding component 3 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:47,220,824...47,232,860
Ensembl chr19:47,220,822...47,232,766 		JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:125,823,546...125,853,695
Ensembl chr10:125,823,546...125,853,695 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in IMP (PMID:17875758) UniProt PMID:17875758 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IDA (PMID:16384933) UniProt PMID:16384933 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044 		JBrowse link
G BCL6 BCL6 transcription repressor involved_in IDA (PMID:15577913) UniProt PMID:15577913 NCBI chr 3:187,721,377...187,745,468
Ensembl chr 3:187,721,377...187,745,725 		JBrowse link
G BCLAF1 BCL2 associated transcription factor 1 involved_in IMP (PMID:17938203) UniProt PMID:17938203 NCBI chr 6:136,256,627...136,289,846
Ensembl chr 6:136,256,627...136,289,851 		JBrowse link
G BLM BLM RecQ like helicase involved_in IDA
IMP		 (PMID:23509288)
(PMID:12818200)		 UniProt PMID:12818200 PMID:23509288 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IDA (PMID:26166705) UniProt PMID:26166705 NCBI chr 4:13,568,738...13,627,725
Ensembl chr 4:13,568,738...13,627,725 		JBrowse link
G BPHL biphenyl hydrolase like involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:3,118,376...3,153,578
Ensembl chr 6:3,118,374...3,153,578 		JBrowse link
G BRAT1 BRCA1 associated ATM activator 1 involved_in IMP
IBA
IEA		 (PMID:25631046) UniProt
GO_Central
InterPro		 PMID:25631046 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr 7:2,537,810...2,555,524
Ensembl chr 7:2,537,810...2,555,694 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO
NAS
TAS		 (PMID:23271346)
(PMID:16651405)
(PMID:10910365)		 Ensembl
MGI
ComplexPortal
PINC		 PMID:10910365 PMID:16651405 PMID:23271346 GO_REF:0000107 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G BRD4 bromodomain containing 4 involved_in IMP
IEA		 (PMID:23728299) UniProt PMID:23728299 GO_REF:0000043 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IDA
IEA		 (PMID:15150265) UniProt PMID:15150265 GO_REF:0000043 NCBI chr19:55,283,997...55,312,562
Ensembl chr19:55,282,072...55,312,562 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IDA (PMID:8944033) MGI PMID:8944033 NCBI chr 1:203,305,519...203,309,602
Ensembl chr 1:203,305,491...203,309,602 		JBrowse link
G C10orf90 chromosome 10 open reading frame 90 involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chr10:126,424,997...126,670,693
Ensembl chr10:126,424,997...126,798,708 		JBrowse link
G C1QBP complement C1q binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr17:5,432,777...5,439,155
Ensembl chr17:5,432,777...5,448,830 		JBrowse link
G CASP2 caspase 2 involved_in NAS (PMID:15073321) ComplexPortal PMID:15073321 NCBI chr 7:143,288,351...143,307,696
Ensembl chr 7:143,288,215...143,307,696 		JBrowse link
G CASP3 caspase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11092819) Ensembl
MGI		 PMID:11092819 GO_REF:0000107 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,650,062 		JBrowse link
G CASP9 caspase 9 involved_in
acts_upstream_of_or_within		 IDA
ISO
IMP
IEA		 (PMID:15657060)
(PMID:11092819)		 UniProt
MGI
Ensembl		 PMID:11092819 PMID:15657060 GO_REF:0000107 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534 		JBrowse link
G CBL Cbl proto-oncogene involved_in ISO
IEA		 RGD
Ensembl		 PMID:19546888 GO_REF:0000107 RGD:11038823 NCBI chr11:119,206,339...119,308,149
Ensembl chr11:119,206,298...119,313,926 		JBrowse link
G CBX1 chromobox 1 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr17:48,070,059...48,101,478
Ensembl chr17:48,070,052...48,101,478 		JBrowse link
G CBX3 chromobox 3 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr 7:26,201,443...26,213,607
Ensembl chr 7:26,201,162...26,213,607 		JBrowse link
G CBX5 chromobox 5 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr12:54,230,942...54,280,122
Ensembl chr12:54,230,942...54,280,133 		JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:22,604,757...22,621,514
Ensembl chr 8:22,604,757...22,620,964 		JBrowse link
G CCDC13 coiled-coil domain containing 13 acts_upstream_of_or_within IMP (PMID:24816561) SYSCILIA_CCNET PMID:24816561 NCBI chr 3:42,704,118...42,773,253
Ensembl chr 3:42,705,756...42,773,253 		JBrowse link
G CCND1 cyclin D1 involved_in IDA
IEA		 (PMID:19412162) UniProt PMID:19412162 GO_REF:0000043 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474 		JBrowse link
G CCNK cyclin K acts_upstream_of_or_within IMP (PMID:22012619) MGI PMID:22012619 NCBI chr14:99,481,409...99,512,440
Ensembl chr14:99,481,169...99,535,044 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IDA (PMID:19202191) UniProt PMID:19202191 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852 		JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:19151707 RGD:10053571 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789 		JBrowse link
G CDK3 cyclin dependent kinase 3 acts_upstream_of_or_within IDA (PMID:24550317) MGI PMID:24550317 NCBI chr17:76,000,855...76,005,998
Ensembl chr17:76,000,855...76,005,999 		JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:19151707 RGD:10053571 NCBI chr 7:151,053,815...151,057,897
Ensembl chr 7:151,053,815...151,057,897 		JBrowse link
G CDK6 cyclin dependent kinase 6 ISO RGD PMID:19151707 RGD:10053571 NCBI chr 7:92,604,921...92,836,573
Ensembl chr 7:92,604,921...92,836,573 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:12952892)
(PMID:20160708)		 Ensembl
MGI
GO_Central
TreeGrafter
BHF-UCL		 PMID:12952892 PMID:20160708 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G CDKN2AIP CDKN2A interacting protein involved_in IDA (PMID:24825908) UniProt PMID:24825908 NCBI chr 4:183,444,636...183,449,064
Ensembl chr 4:183,444,635...183,449,064 		JBrowse link
G CENPS centromere protein S involved_in IDA
IMP		 (PMID:20347429)
(PMID:20347428)		 UniProt PMID:20347428 PMID:20347429 NCBI chr 1:10,430,433...10,442,808
Ensembl chr 1:10,430,433...10,442,808 		JBrowse link
G CENPS-CORT CENPS-CORT readthrough involved_in IDA
IMP		 (PMID:20347429)
(PMID:20347428)		 UniProt PMID:20347428 PMID:20347429 NCBI chr 1:10,430,433...10,452,153
Ensembl chr 1:10,430,102...10,452,153 		JBrowse link
G CEP63 centrosomal protein 63 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:134,485,724...134,782,559
Ensembl chr 3:134,485,699...134,587,789 		JBrowse link
G CFAP410 cilia and flagella associated protein 410 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:44,328,944...44,339,390
Ensembl chr21:44,328,944...44,339,402 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IDA
IBA		 (PMID:28738408) UniProt
GO_Central		 PMID:28738408 GO_REF:0000033 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297 		JBrowse link
G CHCHD6 coiled-coil-helix-coiled-coil-helix domain containing 6 involved_in IDA
IBA		 (PMID:22228767) UniProt
GO_Central		 PMID:22228767 GO_REF:0000033 NCBI chr 3:126,704,240...126,960,420
Ensembl chr 3:126,704,240...126,960,420 		JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in IDA
IBA
IEA		 (PMID:19661379), (PMID:29220652), (PMID:29220653) UniProt
GO_Central
TreeGrafter		 PMID:19661379 PMID:29220652 PMID:29220653 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:147,172,747...147,295,762
Ensembl chr 1:147,242,654...147,295,765 		JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19137022) Ensembl
MGI		 PMID:19137022 GO_REF:0000107 NCBI chr15:92,900,324...93,027,996
Ensembl chr15:92,886,203...93,027,996 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS
IMP		 (PMID:11790307), (PMID:12529385)
(PMID:20932473)		 Ensembl
MGI
UniProt		 PMID:11790307 PMID:12529385 PMID:20932473 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in
acts_upstream_of_or_within		 IMP
IDA
TAS		 (PMID:16481012)
(PMID:24550317)
(PMID:9836640), (PMID:9889122)		 UniProt
MGI		 PMID:9836640 PMID:9889122 PMID:16481012 PMID:24550317 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CIB1 calcium and integrin binding 1 involved_in IDA (PMID:12011095) HGNC-UCL PMID:12011095 NCBI chr15:90,229,975...90,265,759
Ensembl chr15:90,229,975...90,234,047 		JBrowse link
G CIP2A cellular inhibitor of PP2A involved_in IEA
IDA		 (PMID:35842428), (PMID:37165191), (PMID:37316668) UniProt PMID:35842428 PMID:37165191 PMID:37316668 GO_REF:0000043 NCBI chr 3:108,549,864...108,589,438
Ensembl chr 3:108,549,864...108,589,644 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909 		JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain involved_in NAS (PMID:15073321) ComplexPortal PMID:15073321 NCBI chr12:93,677,375...93,894,840
Ensembl chr12:93,677,375...93,894,840 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in IDA (PMID:18411307), (PMID:18583988), (PMID:20545769), (PMID:30898438), (PMID:35597237) UniProt PMID:18411307 PMID:18583988 PMID:20545769 PMID:30898438 PMID:35597237 NCBI chr20:472,498...543,790
Ensembl chr20:472,498...543,835 		JBrowse link
G CTC1 CST telomere replication complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22531781) Ensembl
MGI		 PMID:22531781 GO_REF:0000107 NCBI chr17:8,224,815...8,248,056
Ensembl chr17:8,224,815...8,248,058 		JBrowse link
G CTLA4 cytotoxic T-lymphocyte associated protein 4 involved_in IMP (PMID:17875758) UniProt PMID:17875758 NCBI chr 2:203,867,771...203,873,965
Ensembl chr 2:203,853,888...203,873,965 		JBrowse link
G CUL4A cullin 4A involved_in EXP
IEA
IBA		 (PMID:22118460) ComplexPortal
TreeGrafter
GO_Central		 PMID:22118460 GO_REF:0000033 GO_REF:0000118 NCBI chr13:113,208,193...113,267,108
Ensembl chr13:113,208,193...113,267,108 		JBrowse link
G CUL4B cullin 4B involved_in ISS
IBA		 ComplexPortal
GO_Central		 GO_REF:0000033 GO_REF:0000114 NCBI chr  X:120,523,858...120,575,532
Ensembl chr  X:120,505,920...120,604,074 		JBrowse link
G DCUN1D5 defective in cullin neddylation 1 domain containing 5 involved_in IMP (PMID:23098533), (PMID:26906416) UniProt PMID:23098533 PMID:26906416 NCBI chr11:103,050,686...103,092,160
Ensembl chr11:103,050,686...103,092,194 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IMP
EXP
ISS		 (PMID:16949367)
(PMID:22118460)		 UniProt
ComplexPortal		 PMID:16949367 PMID:22118460 GO_REF:0000114 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in ISS
EXP		 (PMID:22118460) ComplexPortal PMID:22118460 GO_REF:0000114 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) MGI PMID:17515607 NCBI chr11:82,901,736...82,934,659
Ensembl chr11:82,899,975...82,958,277 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 involved_in TAS (PMID:1339368) PINC PMID:1339368 NCBI chr12:57,516,588...57,520,517
Ensembl chr12:57,516,588...57,521,737 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in IMP (PMID:23797032) UniProt PMID:23797032 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799 		JBrowse link
G DELE1 DAP3 binding cell death enhancer 1 involved_in IDA (PMID:37832546) UniProt PMID:37832546 NCBI chr 5:141,923,871...141,942,047
Ensembl chr 5:141,923,855...141,942,047 		JBrowse link
G DGCR8 DGCR8 microprocessor complex subunit involved_in IDA (PMID:34188037) UniProt PMID:34188037 NCBI chr22:20,080,241...20,111,872
Ensembl chr22:20,080,221...20,111,877 		JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IEA
IDA
IMP		 (PMID:20129063)
(PMID:16949367)		 UniProt PMID:16949367 PMID:20129063 GO_REF:0000043 NCBI chr 1:212,035,748...212,105,013
Ensembl chr 1:212,035,553...212,107,400 		JBrowse link
G DYNLL1 dynein light chain LC8-type 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:120,469,842...120,498,493
Ensembl chr12:120,469,850...120,498,493 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEP (PMID:19965871) UniProt PMID:19965871 NCBI chr12:67,648,745...67,665,406
Ensembl chr12:67,648,338...67,665,406 		JBrowse link
G E2F7 E2F transcription factor 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:77,021,251...77,065,569
Ensembl chr12:77,021,248...77,065,569 		JBrowse link
G EGLN3 egl-9 family hypoxia inducible factor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:33,924,227...33,951,074
Ensembl chr14:33,924,227...34,462,774 		JBrowse link
G ENDOG endonuclease G involved_in IMP (PMID:33473107) UniProt PMID:33473107 NCBI chr 9:128,818,500...128,822,676
Ensembl chr 9:128,818,500...128,822,676 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9197240)
(PMID:11707424), (PMID:15692571), (PMID:15979950)		 Ensembl
MGI		 PMID:9197240 PMID:11707424 PMID:15692571 PMID:15979950 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11408355), (PMID:15979950) Ensembl
MGI		 PMID:11408355 PMID:15979950 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IDA (PMID:11782547) UniProt PMID:11782547 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IDA
IBA		 (PMID:27723717), (PMID:27723720) UniProt
GO_Central		 PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr 2:67,397,333...67,412,089
Ensembl chr 2:67,397,322...67,412,089 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IDA
IBA		 (PMID:22266823), (PMID:22343915), (PMID:22396592), (PMID:22705371) UniProt
GO_Central		 PMID:22266823 PMID:22343915 PMID:22396592 PMID:22705371 GO_REF:0000033 NCBI chr 1:2,184,477...2,212,720
Ensembl chr 1:2,184,461...2,212,720 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IDA (PMID:32165630) UniProt PMID:32165630 NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039 		JBrowse link
G FAM178B family with sequence similarity 178 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:96,875,885...96,986,580
Ensembl chr 2:96,875,882...96,986,580 		JBrowse link
G FANCD2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12893777) Ensembl
MGI		 PMID:12893777 GO_REF:0000107 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,370...10,101,932 		JBrowse link
G FANCF FA complementation group F involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:21915857) GO_Central
MGI
TreeGrafter		 PMID:21915857 GO_REF:0000033 GO_REF:0000118 NCBI chr11:22,622,533...22,625,823
Ensembl chr11:22,622,533...22,625,823 		JBrowse link
G FANCG FA complementation group G involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11823446)
(PMID:11719385)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:11719385 PMID:11823446 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:35,073,839...35,079,942
Ensembl chr 9:35,073,835...35,080,004 		JBrowse link
G FANCL FA complementation group L involved_in IMP (PMID:16916645) UniProt PMID:16916645 NCBI chr 2:58,159,243...58,241,380
Ensembl chr 2:58,159,243...58,241,410 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IDA (PMID:19736316), (PMID:23361013), (PMID:25585578) UniProt PMID:19736316 PMID:23361013 PMID:25585578 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594 		JBrowse link
G FBXO31 F-box protein 31 involved_in IDA
IEA		 (PMID:19412162) UniProt PMID:19412162 GO_REF:0000043 NCBI chr16:87,326,987...87,392,121
Ensembl chr16:87,326,987...87,392,142 		JBrowse link
G FBXO45 F-box protein 45 involved_in IDA (PMID:19581926) UniProt PMID:19581926 NCBI chr 3:196,568,660...196,589,059
Ensembl chr 3:196,568,611...196,589,059 		JBrowse link
G FBXO5 F-box protein 5 involved_in IMP (PMID:17875940) UniProt PMID:17875940 NCBI chr 6:152,970,535...152,983,579
Ensembl chr 6:152,970,519...152,983,579 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IDA (PMID:17873522) UniProt PMID:17873522 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092 		JBrowse link
G FH fumarate hydratase involved_in IDA (PMID:20231875), (PMID:26237645) UniProt PMID:20231875 PMID:26237645 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,511...241,519,799 		JBrowse link
G FLYWCH1 FLYWCH-type zinc finger 1 involved_in IMP
IEA		 (PMID:33924684) UniProt PMID:33924684 GO_REF:0000043 NCBI chr16:2,911,931...2,951,208
Ensembl chr16:2,911,931...2,951,208 		JBrowse link
G FMN2 formin 2 involved_in IMP
IEA
IDA		 (PMID:23375502)
(PMID:26287480)		 UniProt PMID:23375502 PMID:26287480 GO_REF:0000043 NCBI chr 1:240,091,883...240,475,187
Ensembl chr 1:240,014,348...240,475,187 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125 		JBrowse link
G FNIP2 folliculin interacting protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:158,769,026...158,908,050
Ensembl chr 4:158,769,026...158,908,050 		JBrowse link
G FOXO1 forkhead box O1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:40,555,667...40,666,641
Ensembl chr13:40,555,667...40,666,641 		JBrowse link
G FOXP1 forkhead box P1 involved_in IMP (PMID:30111844) ARUK-UCL PMID:30111844 NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978 		JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:67,685,201...67,688,334
Ensembl chr 1:67,685,201...67,688,334 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor involved_in IDA (PMID:29651020) UniProt PMID:29651020 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925 		JBrowse link
G GNB1L G protein subunit beta 1 like involved_in IMP
IEA		 (PMID:37541219) UniProt PMID:37541219 GO_REF:0000043 NCBI chr22:19,783,223...19,854,874
Ensembl chr22:19,783,223...19,854,939 		JBrowse link
G GNL1 G protein nucleolar 1 (putative) involved_in IDA (PMID:17525332) UniProt PMID:17525332 NCBI chr 6:30,541,381...30,556,489
Ensembl chr 6:30,541,381...30,556,489 		JBrowse link
G H2AX H2A.X variant histone involved_in IDA
IBA
IMP		 (PMID:15149599)
(PMID:27248496)		 BHF-UCL
GO_Central
UniProt		 PMID:15149599 PMID:27248496 GO_REF:0000033 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G HELB DNA helicase B involved_in IEA
IDA		 (PMID:26774285) Ensembl
UniProt		 PMID:26774285 GO_REF:0000107 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,493...66,343,643 		JBrowse link
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in IDA (PMID:22508508) UniProt PMID:22508508 NCBI chr15:28,111,040...28,322,179
Ensembl chr15:28,111,040...28,322,179 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA
IDA		 (PMID:30554877), (PMID:31235913), (PMID:32492421), (PMID:36608669), (PMID:37519246), (PMID:37950866) UniProt PMID:30554877 PMID:31235913 PMID:32492421 PMID:36608669 PMID:37519246 More... GO_REF:0000043 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G HPF1 histone PARylation factor 1 involved_in IMP
IBA
IEA		 (PMID:27067600), (PMID:29480802) UniProt
GO_Central
InterPro		 PMID:27067600 PMID:29480802 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:169,729,470...169,757,944
Ensembl chr 4:169,729,470...169,757,944 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IMP (PMID:31467087) UniProt PMID:31467087 NCBI chr17:44,141,930...44,162,476
Ensembl chr17:44,141,906...44,162,476 		JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:103,930,410...103,947,926
Ensembl chr12:103,930,107...103,953,931 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:11790307)
(PMID:9872989)		 UniProt
MGI
PINC
Ensembl		 PMID:9872989 PMID:11790307 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G IER3 immediate early response 3 acts_upstream_of_or_within
involved_in		 IMP
IBA
IEA		 (PMID:20467439) MGI
GO_Central
Ensembl		 PMID:20467439 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:30,743,199...30,744,547
Ensembl chr 6:30,743,199...30,744,548 		JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:206,470,476...206,496,889
Ensembl chr 1:206,470,476...206,496,889 		JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA
IMP
IDA		 (PMID:25861989)
(PMID:14651848)		 UniProt PMID:14651848 PMID:25861989 GO_REF:0000043 NCBI chr  X:154,541,238...154,565,046
Ensembl chr  X:154,541,199...154,565,046 		JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21824519) Ensembl
MGI		 PMID:21824519 GO_REF:0000107 NCBI chr 7:110,662,644...111,562,492
Ensembl chr 7:110,662,644...111,562,517 		JBrowse link
G ING2 inhibitor of growth family member 2 involved_in NAS (PMID:21124965) BHF-UCL PMID:21124965 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IMP (PMID:19683501) UniProt PMID:19683501 NCBI chr 9:112,683,926...112,718,117
Ensembl chr 9:112,683,926...112,718,149 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IMP (PMID:19683501) UniProt PMID:19683501 NCBI chr 1:153,728,050...153,774,808
Ensembl chr 1:153,728,050...153,774,808 		JBrowse link
G INTS7 integrator complex subunit 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:211,940,403...212,035,557
Ensembl chr 1:211,940,399...212,035,557 		JBrowse link
G IRF3 interferon regulatory factor 3 involved_in TAS (PMID:16979567) UniProt PMID:16979567 NCBI chr19:49,659,572...49,665,857
Ensembl chr19:49,659,569...49,665,875 		JBrowse link
G IRF7 interferon regulatory factor 7 involved_in TAS (PMID:16979567) UniProt PMID:16979567 NCBI chr11:612,555...615,950
Ensembl chr11:612,553...615,983 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA
IDA		 (PMID:33076429) Ensembl
UniProt		 PMID:33076429 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KDM4D lysine demethylase 4D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550317) Ensembl
MGI		 PMID:24550317 GO_REF:0000107 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519 		JBrowse link
G KIN Kin17 DNA and RNA binding protein involved_in IEA
IBA
IEP		 (PMID:12853634) Ensembl
TreeGrafter
GO_Central
UniProt		 PMID:12853634 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:7,750,962...7,787,993
Ensembl chr10:7,750,962...7,787,993 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IDA
IBA
IEA		 (PMID:11517336) UniProt
GO_Central
TreeGrafter		 PMID:11517336 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:55,879,835...56,014,169
Ensembl chr 8:55,879,835...56,014,169 		JBrowse link
G MACROD1 mono-ADP ribosylhydrolase 1 involved_in IMP
IBA
IEA		 (PMID:23474712) UniProt
GO_Central		 PMID:23474712 GO_REF:0000033 GO_REF:0000043 NCBI chr11:63,998,558...64,166,113
Ensembl chr11:63,998,558...64,166,113 		JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 involved_in IEA
IBA
IMP		 (PMID:23474712) UniProt
GO_Central		 PMID:23474712 GO_REF:0000033 GO_REF:0000043 NCBI chr20:13,995,516...16,053,197
Ensembl chr20:13,995,369...16,053,197 		JBrowse link
G MAEL maelstrom spermatogenic transposon silencer involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18694567) Ensembl
MGI		 PMID:18694567 GO_REF:0000107 NCBI chr 1:166,975,582...167,022,214
Ensembl chr 1:166,975,582...167,022,214 		JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383658) Ensembl
MGI		 PMID:15383658 GO_REF:0000107 NCBI chr22:21,759,657...21,867,680
Ensembl chr22:21,759,657...21,867,680 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20212154) Ensembl
MGI		 PMID:20212154 GO_REF:0000107 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 involved_in IDA (PMID:19166846) UniProt PMID:19166846 NCBI chr 8:143,716,349...143,722,458
Ensembl chr 8:143,716,340...143,722,458 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383658) Ensembl
MGI		 PMID:15383658 GO_REF:0000107 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IMP
IEA		 (PMID:20932473) UniProt PMID:20932473 GO_REF:0000043 NCBI chr 1:206,684,905...206,734,281
Ensembl chr 1:206,684,905...206,734,281 		JBrowse link
G MAPT microtubule associated protein tau involved_in IMP (PMID:21131359) ParkinsonsUK-UCL PMID:21131359 NCBI chr17:45,894,554...46,028,334
Ensembl chr17:45,894,527...46,028,334 		JBrowse link
G MASTL microtubule associated serine/threonine kinase like involved_in ISS UniProt GO_REF:0000024 NCBI chr10:27,154,479...27,187,953
Ensembl chr10:27,154,824...27,187,953 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14562041) MGI PMID:14562041 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member acts_upstream_of_or_within IMP (PMID:20467439) MGI PMID:20467439 NCBI chr 1:150,574,558...150,579,610
Ensembl chr 1:150,560,895...150,579,738 		JBrowse link
G MCM10 minichromosome maintenance 10 replication initiation factor involved_in IMP
IEA		 (PMID:24726359) UniProt PMID:24726359 GO_REF:0000043 NCBI chr10:13,161,558...13,211,110
Ensembl chr10:13,161,558...13,211,110 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IMP (PMID:15538388) UniProt PMID:15538388 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,233...100,101,940 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IDA
IEA		 (PMID:22771115) UniProt
Ensembl		 PMID:22771115 GO_REF:0000107 NCBI chr20:5,950,652...5,998,977
Ensembl chr20:5,950,652...5,998,977 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IDA
IEA		 (PMID:22771115) UniProt
Ensembl		 PMID:22771115 GO_REF:0000107 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162 		JBrowse link
G MCTS1 MCTS1 re-initiation and release factor involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:120,604,101...120,621,159
Ensembl chr  X:120,594,010...120,621,159 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in IDA (PMID:30898438) UniProt PMID:30898438 NCBI chr 6:30,699,807...30,717,281
Ensembl chr 6:30,699,807...30,717,447 		JBrowse link
G MEN1 menin 1 involved_in IDA (PMID:16690369) UniProt PMID:16690369 NCBI chr11:64,803,516...64,811,294
Ensembl chr11:64,803,510...64,811,294 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA
IDA		 (PMID:28297716) UniProt PMID:28297716 GO_REF:0000043 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10657972), (PMID:9560238) RGD
MGI
Ensembl		 PMID:9560238 PMID:10657972 PMID:12815001 GO_REF:0000107 RGD:2316926 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983 		JBrowse link
G MICA MHC class I polypeptide-related sequence A involved_in IDA (PMID:15995699) UniProt PMID:15995699 NCBI chr 6:31,400,711...31,415,315
Ensembl chr 6:31,399,784...31,415,315 		JBrowse link
G MIR193A microRNA 193a involved_in IDA (PMID:25542424) ARUK-UCL PMID:25542424 NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083 		JBrowse link
G MIR34A microRNA 34a involved_in IDA (PMID:30111844) ARUK-UCL PMID:30111844 NCBI chr 1:9,151,668...9,151,777
Ensembl chr 1:9,151,668...9,151,777 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14562041), (PMID:16204034)
(PMID:10657972), (PMID:9560238)		 UniProt
MGI
Ensembl		 PMID:9560238 PMID:10657972 PMID:14562041 PMID:16204034 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MLH3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16204034) UniProt
MGI
Ensembl		 PMID:16204034 GO_REF:0000043 GO_REF:0000107 NCBI chr14:75,013,775...75,051,467
Ensembl chr14:75,013,769...75,051,532 		JBrowse link
G MLST8 MTOR associated protein, LST8 homolog involved_in NAS (PMID:17041623) ComplexPortal PMID:17041623 NCBI chr16:2,205,454...2,209,453
Ensembl chr16:2,204,248...2,209,453 		JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IMP (PMID:17875758) UniProt PMID:17875758 NCBI chr 1:158,831,351...158,849,502
Ensembl chr 1:158,831,351...158,849,506 		JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IDA (PMID:23260667) UniProt PMID:23260667 NCBI chr22:30,925,130...30,968,774
Ensembl chr22:30,925,130...30,968,774 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IDA (PMID:29670289)
(PMID:17500065)		 UniProt
MGI		 PMID:17500065 PMID:29670289 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IMP (PMID:27568553) UniProt PMID:27568553 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10097137), (PMID:10720738), (PMID:11429706)
(PMID:14744764)		 Ensembl
MGI
UniProt		 PMID:10097137 PMID:10720738 PMID:11429706 PMID:14744764 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815 		JBrowse link
G MSH6 mutS homolog 6 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G MSL2 MSL complex subunit 2 involved_in IDA
IEA		 (PMID:19033443), (PMID:23874665) UniProt PMID:19033443 PMID:23874665 GO_REF:0000043 NCBI chr 3:136,148,917...136,196,335
Ensembl chr 3:136,148,917...136,197,241 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in NAS (PMID:17041623) ComplexPortal PMID:17041623 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556 		JBrowse link
G MTREX Mtr4 exosome RNA helicase involved_in IMP
IEA		 (PMID:29902117) UniProt PMID:29902117 GO_REF:0000043 NCBI chr 5:55,307,989...55,425,579
Ensembl chr 5:55,307,989...55,425,579 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in
acts_upstream_of_or_within		 IDA
ISO		 (PMID:17873522)
(PMID:20212154)		 UniProt
MGI		 PMID:17873522 PMID:20212154 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IMP (PMID:19683501) UniProt PMID:19683501 NCBI chr 2:191,678,136...191,686,943
Ensembl chr 2:191,678,068...191,741,097 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IMP (PMID:18449195), (PMID:19683501) UniProt PMID:18449195 PMID:19683501 NCBI chr12:56,222,015...56,229,854
Ensembl chr12:56,222,015...56,229,854 		JBrowse link
G NAE1 NEDD8 activating enzyme E1 subunit 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:66,802,878...66,830,976
Ensembl chr16:66,802,875...66,873,256 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 acts_upstream_of_or_within IDA (PMID:17500065) MGI PMID:17500065 NCBI chr20:34,714,774...34,825,651
Ensembl chr20:34,689,097...34,825,651 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in IMP (PMID:17996703) BHF-UCL PMID:17996703 NCBI chr15:55,826,917...55,993,612
Ensembl chr15:55,826,922...55,993,660 		JBrowse link
G NEK1 NIMA related kinase 1 acts_upstream_of_or_within ISO (PMID:15604234) MGI PMID:15604234 NCBI chr 4:169,392,809...169,612,583
Ensembl chr 4:169,369,704...169,612,632 		JBrowse link
G NEK4 NIMA related kinase 4 involved_in IMP
IBA		 (PMID:22851694) UniProt
GO_Central		 PMID:22851694 GO_REF:0000033 NCBI chr 3:52,708,444...52,770,940
Ensembl chr 3:52,708,444...52,770,946 		JBrowse link
G NFAT5 nuclear factor of activated T cells 5 involved_in IDA
IEA		 (PMID:34049076) UniProt PMID:34049076 GO_REF:0000043 NCBI chr16:69,565,966...69,704,654
Ensembl chr16:69,565,094...69,704,666 		JBrowse link
G NFATC2 nuclear factor of activated T cells 2 involved_in IMP (PMID:17875758) UniProt PMID:17875758 NCBI chr20:51,386,963...51,562,839
Ensembl chr20:51,386,957...51,562,831 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IMP (PMID:17468178) UniProt PMID:17468178 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413 		JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in IDA (PMID:20395202) UniProt PMID:20395202 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in IMP (PMID:27829214) UniProt PMID:27829214 NCBI chr19:47,745,546...47,757,058
Ensembl chr19:47,745,546...47,757,058 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IEA
IMP		 (PMID:18819933) UniProt PMID:18819933 GO_REF:0000043 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829 		JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IMP
IEA		 (PMID:29902117) UniProt PMID:29902117 GO_REF:0000043 NCBI chr14:90,267,860...90,331,941
Ensembl chr14:90,267,860...90,331,969 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IMP (PMID:18086888) UniProt PMID:18086888 NCBI chr16:27,224,994...27,268,772
Ensembl chr16:27,224,994...27,268,772 		JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in IMP (PMID:18086888) UniProt PMID:18086888 NCBI chr10:121,957,091...121,975,217
Ensembl chr10:121,957,091...121,975,217 		JBrowse link
G NUAK1 NUAK family kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:106,063,345...106,138,954
Ensembl chr12:106,063,345...106,138,954 		JBrowse link
G NUGGC nuclear GTPase, germinal center associated acts_upstream_of_or_within ISO (PMID:22833677) MGI PMID:22833677 NCBI chr 8:28,021,964...28,083,936
Ensembl chr 8:28,021,964...28,083,936 		JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in IDA (PMID:25899918) UniProt PMID:25899918 NCBI chr 7:56,114,681...56,116,417
Ensembl chr 7:56,114,681...56,116,417 		JBrowse link
G OARD1 O-acyl-ADP-ribose deacylase 1 involved_in IMP (PMID:23481255) UniProt PMID:23481255 NCBI chr 6:41,064,772...41,097,787
Ensembl chr 6:41,033,627...41,097,787 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within IGI (PMID:19506022) MGI PMID:19506022 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IDA (PMID:20725033) UniProt PMID:20725033 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (MGI:3844416|PMID:19124460) UniProt PMID:19124460 MGI:3844416 NCBI chr16:29,816,152...29,822,489
Ensembl chr16:29,816,152...29,822,489 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 involved_in IDA (PMID:23260667) UniProt PMID:23260667 NCBI chr11:77,322,017...77,530,009
Ensembl chr11:77,322,017...77,474,635 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15282315) UniProt
MGI		 PMID:15282315 GO_REF:0000043 NCBI chr10:49,818,279...49,942,027
Ensembl chr10:49,818,279...49,970,203 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 ISO
IDA
IEA
IMP		 (PMID:22683995), (PMID:32358582), (PMID:35013556), (PMID:35393539), (PMID:37823600)
(PMID:24289924), (PMID:27067600), (PMID:27248496)
(PMID:24550317)		 RGD
UniProt
Ensembl
MGI		 PMID:15857403 PMID:22683995 PMID:24289924 PMID:24550317 PMID:27067600 More... GO_REF:0000107 GO_REF:0000117 RGD:1601082 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA
IDA		 (PMID:34108479) UniProt PMID:34108479 GO_REF:0000117 NCBI chr14:20,343,635...20,357,904
Ensembl chr14:20,343,615...20,357,904 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:51,942,363...51,948,867
Ensembl chr 3:51,942,345...51,948,867 		JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 involved_in NAS (PMID:10477748) UniProt PMID:10477748 NCBI chr13:24,420,931...24,512,778
Ensembl chr13:24,420,931...24,512,778 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17500065) Ensembl
MGI		 PMID:17500065 GO_REF:0000107 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IDA (PMID:25574025) UniProt PMID:25574025 NCBI chr 9:136,992,422...136,993,976
Ensembl chr 9:136,992,422...136,993,984 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA
IDA		 (PMID:21628590), (PMID:23000965) InterPro
UniProt		 PMID:21628590 PMID:23000965 GO_REF:0000002 NCBI chr15:64,364,304...64,387,687
Ensembl chr15:64,364,304...64,387,687 		JBrowse link
G PHF1 PHD finger protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:33,410,412...33,416,439
Ensembl chr 6:33,410,399...33,416,453 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 involved_in IDA (PMID:36050397) UniProt PMID:36050397 NCBI chr15:68,054,315...68,193,847
Ensembl chr15:68,054,309...68,198,603 		JBrowse link
G PIDD1 p53-induced death domain protein 1 involved_in IEA
NAS
IDA		 (PMID:15073321)
(PMID:21726810)		 InterPro
ComplexPortal
UniProt		 PMID:15073321 PMID:21726810 GO_REF:0000002 NCBI chr11:799,184...809,501
Ensembl chr11:799,179...809,753 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21159655) Ensembl
MGI		 PMID:21159655 GO_REF:0000107 NCBI chr 9:135,495,181...135,499,869
Ensembl chr 9:135,495,181...135,501,734 		JBrowse link
G PLK3 polo like kinase 3 involved_in IDA
IBA
IEA
IMP		 (PMID:19490146)
(PMID:16481012)		 UniProt
GO_Central
TreeGrafter		 PMID:16481012 PMID:19490146 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr 1:44,800,377...44,805,990
Ensembl chr 1:44,800,377...44,805,990 		JBrowse link
G PLK5 polo like kinase 5 (inactive) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:1,524,077...1,536,046
Ensembl chr19:1,508,023...1,536,046 		JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12952892) InterPro
MGI		 PMID:12952892 GO_REF:0000002 NCBI chr18:59,899,996...59,904,305
Ensembl chr18:59,899,996...59,904,305 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:189,784,450...189,877,629
Ensembl chr 2:189,784,085...189,877,629 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16204034) UniProt
MGI
Ensembl		 PMID:16204034 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in ISO (MGI:5780352|PMID:26774286) UniProt PMID:26774286 MGI:5780352 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G POLB DNA polymerase beta involved_in IMP (PMID:21362556) UniProt PMID:21362556 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:113,407,235...113,410,749
Ensembl chr 9:113,407,235...113,410,675 		JBrowse link
G POLI DNA polymerase iota involved_in IEA UniProt GO_REF:0000117 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,517...54,321,266 		JBrowse link
G POLK DNA polymerase kappa involved_in IDA
IEA		 (PMID:28297716) UniProt PMID:28297716 GO_REF:0000117 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
G POLQ DNA polymerase theta involved_in IDA (PMID:25642963), (PMID:25643323) UniProt PMID:25642963 PMID:25643323 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A involved_in TAS (PMID:9153226) PINC PMID:9153226 NCBI chr19:48,872,421...48,876,058
Ensembl chr19:48,872,212...48,876,059 		JBrowse link
G PPP4R3A protein phosphatase 4 regulatory subunit 3A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:91,457,508...91,510,554
Ensembl chr14:91,457,508...91,510,554 		JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:55,547,292...55,617,622
Ensembl chr 2:55,547,292...55,618,880 		JBrowse link
G PPP4R3C protein phosphatase 4 regulatory subunit 3C involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:27,460,207...27,463,341
Ensembl chr  X:27,460,207...27,463,341 		JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in IDA (PMID:23235459) UniProt PMID:23235459 NCBI chr10:133,347,373...133,352,683
Ensembl chr10:133,347,368...133,352,683 		JBrowse link
G PRKCD protein kinase C delta involved_in IMP (PMID:17938203) UniProt PMID:17938203 NCBI chr 3:53,161,209...53,192,717
Ensembl chr 3:53,156,009...53,192,717 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IDA (PMID:26237645), (PMID:29478807), (PMID:35460603) UniProt PMID:26237645 PMID:29478807 PMID:35460603 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in IDA (PMID:15741314), (PMID:16294045) UniProt PMID:15741314 PMID:16294045 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029 		JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:25542424)
(PMID:12460542)		 ARUK-UCL
MGI
Ensembl		 PMID:12460542 PMID:25542424 GO_REF:0000107 NCBI chr14:73,136,417...73,223,691
Ensembl chr14:73,136,418...73,223,691 		JBrowse link
G PSME4 proteasome activator subunit 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:53,864,069...53,970,993
Ensembl chr 2:53,864,069...53,970,993 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in TAS (PMID:9872989) PINC PMID:9872989 NCBI chr 5:34,905,260...34,915,504
Ensembl chr 5:34,905,260...34,918,989 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:15297881)
(PMID:15538388)		 Ensembl
MGI
UniProt		 PMID:15297881 PMID:15538388 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:69,369,293...69,414,801
Ensembl chr 5:69,369,293...69,414,801 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in		 IDA
IEA		 (PMID:25023518)
(PMID:22036607), (PMID:25931565)		 MGI
UniProt		 PMID:22036607 PMID:25023518 PMID:25931565 GO_REF:0000117 NCBI chr 3:8,877,075...8,963,472
Ensembl chr 3:8,775,402...8,963,773 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12815074) Ensembl
MGI		 PMID:12815074 GO_REF:0000107 NCBI chr19:12,945,862...12,953,642
Ensembl chr19:12,945,855...12,953,642 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12815074) Ensembl
MGI		 PMID:12815074 GO_REF:0000107 NCBI chr 9:107,283,279...107,332,194
Ensembl chr 9:107,283,137...107,332,192 		JBrowse link
G RAD50 RAD50 double strand break repair protein acts_upstream_of_or_within ISO
IDA		 cyclophosphamide
(PMID:17500065)		 RGD
MGI		 PMID:11056294 PMID:17500065 RGD:727220 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
G RAD51 RAD51 recombinase involved_in IMP
IDA		 (PMID:26681308)
(PMID:17996710), (PMID:17996711), (PMID:23509288), (PMID:25585578), (PMID:27239033)		 UniProt PMID:17996710 PMID:17996711 PMID:23509288 PMID:25585578 PMID:26681308 More... NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IDA (PMID:17996710), (PMID:17996711) UniProt PMID:17996710 PMID:17996711 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RAD51D RAD51 paralog D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20813759) Ensembl
MGI		 PMID:20813759 GO_REF:0000107 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,221...35,121,522 		JBrowse link
G RAD54B RAD54 homolog B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16428451)
(PMID:19061978)		 Ensembl
MGI		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115 		JBrowse link
G RAD54L RAD54 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16428451)
(PMID:19061978)		 Ensembl
MGI		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA
IDA		 (PMID:9872989) UniProt PMID:9872989 GO_REF:0000043 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G RASSF1 Ras association domain family member 1 involved_in IMP (PMID:18566590) UniProt PMID:18566590 NCBI chr 3:50,329,788...50,340,836
Ensembl chr 3:50,329,782...50,340,980 		JBrowse link
G RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit acts_upstream_of_or_within IDA (PMID:17500065) MGI PMID:17500065 NCBI chr 1:205,086,142...205,121,978
Ensembl chr 1:205,086,142...205,122,015 		JBrowse link
G RBBP6 RB binding protein 6, ubiquitin ligase involved_in IMP
IEA		 (PMID:24726359) UniProt PMID:24726359 GO_REF:0000043 NCBI chr16:24,539,566...24,572,863
Ensembl chr16:24,537,693...24,572,863 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr18:22,914,139...23,026,486
Ensembl chr18:22,798,261...23,026,488 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:24356969) UniProt PMID:24356969 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871 		JBrowse link
G RBX1 ring-box 1 involved_in ISS
EXP		 (PMID:22118460) ComplexPortal PMID:22118460 GO_REF:0000114 NCBI chr22:40,951,378...40,973,309
Ensembl chr22:40,951,347...40,973,309 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IDA (PMID:26474068), (PMID:28575657), (PMID:28575658) UniProt PMID:26474068 PMID:28575657 PMID:28575658 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IDA (PMID:28241136) UniProt PMID:28241136 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G RNF168 ring finger protein 168 involved_in IDA (PMID:19500350), (PMID:20550933), (PMID:22373579), (PMID:22508508), (PMID:22980979) UniProt PMID:19500350 PMID:20550933 PMID:22373579 PMID:22508508 PMID:22980979 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF169 ring finger protein 169 involved_in IMP
IDA		 (PMID:22492721)
(PMID:22733822)		 UniProt PMID:22492721 PMID:22733822 NCBI chr11:74,748,849...74,842,413
Ensembl chr11:74,748,849...74,842,413 		JBrowse link
G RNF8 ring finger protein 8 involved_in IDA
IEA		 (PMID:20550933), (PMID:21911360), (PMID:22266820), (PMID:22373579), (PMID:22980979) UniProt
Ensembl		 PMID:20550933 PMID:21911360 PMID:22266820 PMID:22373579 PMID:22980979 GO_REF:0000107 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G RPA1 replication protein A1 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IEP (PMID:17560175) UniProt PMID:17560175 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in NAS (PMID:17041623) ComplexPortal PMID:17041623 NCBI chr17:80,544,838...80,966,368
Ensembl chr17:80,544,819...80,966,371 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA (PMID:28834754), (PMID:29670289) UniProt PMID:28834754 PMID:29670289 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr16:30,957,754...30,984,664
Ensembl chr16:30,957,294...30,984,664 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within IDA (PMID:23509280) MGI PMID:23509280 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699 		JBrowse link
G SETX senataxin involved_in IDA (PMID:17562789) UniProt PMID:17562789 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986 		JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within ISO (PMID:20813759) MGI PMID:20813759 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446 		JBrowse link
G SGK1 serum/glucocorticoid regulated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383658) Ensembl
MGI		 PMID:15383658 GO_REF:0000107 NCBI chr 6:134,169,256...134,318,112
Ensembl chr 6:134,169,248...134,318,112 		JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase acts_upstream_of_or_within
involved_in		 IDA
IEA
IBA		 (PMID:25023518) MGI
TreeGrafter
GO_Central		 PMID:25023518 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:145,857,838...145,964,358
Ensembl chr 6:145,864,245...145,964,423 		JBrowse link
G SIRT1 sirtuin 1 involved_in IDA (PMID:18203716) UniProt PMID:18203716 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SIRT4 sirtuin 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr12:120,291,780...120,313,249
Ensembl chr12:120,302,316...120,313,249 		JBrowse link
G SIRT7 sirtuin 7 involved_in IDA (PMID:30944854) UniProt PMID:30944854 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA
IBA
IDA		 (PMID:25931565) Ensembl
TreeGrafter
GO_Central
UniProt		 PMID:25931565 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:94,618,231...94,697,621
Ensembl chr 5:94,618,669...94,739,436 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IDA
IBA		 (PMID:25931565) UniProt
GO_Central		 PMID:25931565 GO_REF:0000033 NCBI chr10:100,912,963...100,965,134
Ensembl chr10:100,912,963...100,965,134 		JBrowse link
G SLFN11 schlafen family member 11 involved_in IDA
IEA		 (PMID:29395061) UniProt PMID:29395061 GO_REF:0000043 NCBI chr17:35,350,305...35,373,621
Ensembl chr17:35,350,305...35,373,701 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in NAS (PMID:19092802) ComplexPortal PMID:19092802 NCBI chr 4:143,513,702...143,557,486
Ensembl chr 4:143,513,702...143,557,486 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IMP (PMID:19793862) UniProt PMID:19793862 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IDA (PMID:11408570), (PMID:25931565) UniProt PMID:11408570 PMID:25931565 NCBI chr 9:70,258,978...70,354,873
Ensembl chr 9:70,258,978...70,354,873 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IDA (PMID:11408570), (PMID:25931565) UniProt PMID:11408570 PMID:25931565 NCBI chr 2:17,663,812...17,753,810
Ensembl chr 2:17,663,812...17,800,242 		JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IDA (PMID:15175154) UniProt PMID:15175154 NCBI chr16:18,804,860...18,926,408
Ensembl chr16:18,804,860...18,926,408 		JBrowse link
G SPATA18 spermatogenesis associated 18 involved_in IDA (PMID:21264221) UniProt PMID:21264221 NCBI chr 4:52,051,304...52,097,299
Ensembl chr 4:52,051,304...52,097,299 		JBrowse link
G SPDYA speedy/RINGO cell cycle regulator family member A involved_in IEA
IDA		 (PMID:12839962) UniProt PMID:12839962 GO_REF:0000043 NCBI chr 2:28,810,834...28,850,610
Ensembl chr 2:28,782,517...28,850,611 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IDA (PMID:23509288) UniProt PMID:23509288 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306 		JBrowse link
G SPINDOC spindlin interactor and repressor of chromatin binding involved_in IDA
IEA		 (PMID:34737271) UniProt PMID:34737271 GO_REF:0000043 NCBI chr11:63,813,456...63,827,716
Ensembl chr11:63,813,456...63,827,716 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA
IBA
IDA		 (PMID:22681887), (PMID:22894931), (PMID:22902628), (PMID:23042605), (PMID:23042607), (PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32649882), (PMID:36608669) InterPro
GO_Central
UniProt		 PMID:22681887 PMID:22894931 PMID:22902628 PMID:23042605 PMID:23042607 More... GO_REF:0000002 GO_REF:0000033 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA
IBA
IMP		 (PMID:25329316) UniProt
TreeGrafter
GO_Central
Ensembl		 PMID:25329316 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431 		JBrowse link
G STK38 serine/threonine kinase 38 involved_in IDA (PMID:32537488) UniProt PMID:32537488 NCBI chr 6:36,493,892...36,547,479
Ensembl chr 6:36,493,892...36,547,479 		JBrowse link
G STXBP4 syntaxin binding protein 4 involved_in IDA (PMID:19451233) UniProt PMID:19451233 NCBI chr17:54,968,765...55,213,273
Ensembl chr17:54,968,727...55,173,632 		JBrowse link
G SUSD6 sushi domain containing 6 involved_in IDA
IBA		 (PMID:24652652) UniProt
GO_Central		 PMID:24652652 GO_REF:0000033 NCBI chr14:69,611,596...69,715,144
Ensembl chr14:69,611,596...69,715,144 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within IDA (PMID:23509280) MGI PMID:23509280 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in IDA (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:71,366,357...71,530,525
Ensembl chr  X:71,366,222...71,532,374 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 involved_in IC (PMID:11278372) BHF-UCL PMID:11278372 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TANK TRAF family member associated NFKB activator involved_in IMP
IEA		 (PMID:25861989) UniProt PMID:25861989 GO_REF:0000043 NCBI chr 2:161,136,963...161,236,230
Ensembl chr 2:161,136,908...161,236,230 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IDA (PMID:17396146) UniProt PMID:17396146 NCBI chr17:29,390,363...29,551,903
Ensembl chr17:29,390,363...29,551,903 		JBrowse link
G TAOK2 TAO kinase 2 involved_in IDA (PMID:17396146) UniProt PMID:17396146 NCBI chr16:29,973,868...29,992,261
Ensembl chr16:29,973,868...29,992,261 		JBrowse link
G TAOK3 TAO kinase 3 involved_in IDA (PMID:17396146) UniProt PMID:17396146 NCBI chr12:118,149,801...118,372,907
Ensembl chr12:118,149,801...118,372,907 		JBrowse link
G TFDP3 transcription factor Dp family member 3 involved_in IDA (PMID:20559320) UniProt PMID:20559320 NCBI chr  X:133,216,662...133,218,354
Ensembl chr  X:133,216,662...133,218,354 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in IDA (PMID:25928429) UniProt PMID:25928429 NCBI chr12:4,321,213...4,360,028
Ensembl chr12:4,307,763...4,360,028 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IMP
ISS
IEA		 (PMID:23797032) UniProt
Ensembl		 PMID:23797032 GO_REF:0000024 GO_REF:0000107 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:66,336,191...66,386,717
Ensembl chr15:66,336,191...66,386,746 		JBrowse link
G TLK1 tousled like kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:170,990,823...171,231,293
Ensembl chr 2:170,990,823...171,231,314 		JBrowse link
G TLK2 tousled like kinase 2 involved_in IEA
IDA		 (PMID:12660173) UniProt PMID:12660173 GO_REF:0000043 NCBI chr17:62,470,914...62,615,481
Ensembl chr17:62,458,658...62,615,481 		JBrowse link
G TOP2A DNA topoisomerase II alpha involved_in IDA (PMID:16611985) UniProt PMID:16611985 NCBI chr17:40,388,525...40,417,896
Ensembl chr17:40,388,525...40,417,896 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:12773567), (PMID:30898438), (PMID:35842428), (PMID:37165191), (PMID:37316668) UniProt PMID:12773567 PMID:30898438 PMID:35842428 PMID:37165191 PMID:37316668 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:15735665) UniProt
MGI
Ensembl		 PMID:15735665 GO_REF:0000043 GO_REF:0000107 NCBI chr 9:32,540,544...32,552,586
Ensembl chr 9:32,540,544...32,552,586 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in		 IDA
IEA
IMP		 (PMID:14744935)
(PMID:15710329), (PMID:17938203), (PMID:30089260)
(PMID:24356969)		 MGI
BHF-UCL
Ensembl
UniProt		 PMID:14744935 PMID:15710329 PMID:17938203 PMID:24356969 PMID:30089260 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 acts_upstream_of_or_within
involved_in		 IDA
IEA		 (PMID:17500065)
(PMID:27153538), (PMID:28241136)		 MGI
UniProt		 PMID:17500065 PMID:27153538 PMID:28241136 GO_REF:0000043 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G TP63 tumor protein p63 involved_in IDA (PMID:19451233) UniProt PMID:19451233 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276 		JBrowse link
G TP73 tumor protein p73 involved_in
acts_upstream_of_or_within		 IDA
ISO		 (PMID:18174154)
(PMID:16044147)		 UniProt
MGI		 PMID:16044147 PMID:18174154 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
G TRAF6 TNF receptor associated factor 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:36,483,769...36,510,272
Ensembl chr11:36,483,769...36,510,272 		JBrowse link
G TRAIP TRAF interacting protein involved_in IDA (PMID:26711499), (PMID:27462463) UniProt PMID:26711499 PMID:27462463 NCBI chr 3:49,828,601...49,856,564
Ensembl chr 3:49,828,601...49,856,574 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20511593) Ensembl
MGI		 PMID:20511593 GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:229,763,837...229,923,186
Ensembl chr 2:229,763,837...229,923,239 		JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:20,286,227...20,305,951
Ensembl chr14:20,256,558...20,305,960 		JBrowse link
G UBA1 ubiquitin like modifier activating enzyme 1 involved_in IDA
IBA
IEA		 (PMID:22456334) UniProt
GO_Central
TreeGrafter		 PMID:22456334 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:47,190,847...47,215,128
Ensembl chr  X:47,190,861...47,215,128 		JBrowse link
G UBA7 ubiquitin like modifier activating enzyme 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:49,805,209...49,813,953
Ensembl chr 3:49,805,209...49,813,953 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IDA (PMID:14981545) UniProt PMID:14981545 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,184...134,392,108 		JBrowse link
G UBE2E2 ubiquitin conjugating enzyme E2 E2 acts_upstream_of_or_within IMP (PMID:21628527) MGI PMID:21628527 NCBI chr 3:23,203,098...23,591,925
Ensembl chr 3:23,203,020...23,591,794 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IMP
IBA		 (PMID:16916645) UniProt
GO_Central		 PMID:16916645 GO_REF:0000033 NCBI chr 1:202,331,657...202,341,936
Ensembl chr 1:202,331,544...202,341,984 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IDA (PMID:30612738) UniProt PMID:30612738 NCBI chr 1:156,031,247...156,053,798
Ensembl chr 1:156,035,299...156,053,798 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IDA (PMID:12011095) HGNC-UCL PMID:12011095 NCBI chr 8:102,252,273...102,412,700
Ensembl chr 8:102,252,273...102,412,759 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IDA (PMID:30783677), (PMID:32807901) UniProt PMID:30783677 PMID:32807901 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276 		JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 involved_in TAS (PMID:33939809) BHF-UCL PMID:33939809 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IMP (PMID:25861989) UniProt PMID:25861989 NCBI chr16:84,700,000...84,779,922
Ensembl chr16:84,699,986...84,779,922 		JBrowse link
G USP16 ubiquitin specific peptidase 16 involved_in IDA (PMID:20550933) UniProt PMID:20550933 NCBI chr21:29,024,668...29,054,488
Ensembl chr21:29,024,629...29,054,488 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IDA (PMID:17873522) UniProt PMID:17873522 NCBI chr11:113,797,875...113,875,572
Ensembl chr11:113,797,874...113,875,572 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:63,504,593...63,594,633
Ensembl chr15:63,504,511...63,594,640 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IMP (PMID:21362556) UniProt PMID:21362556 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in IDA (PMID:27083998), (PMID:34188037) UniProt PMID:27083998 PMID:34188037 NCBI chr  X:55,484,616...55,489,848
Ensembl chr  X:55,484,616...55,489,848 		JBrowse link
G VAV3 vav guanine nucleotide exchange factor 3 involved_in IMP (PMID:17875758) UniProt PMID:17875758 NCBI chr 1:107,571,161...107,965,180
Ensembl chr 1:107,571,161...107,965,180 		JBrowse link
G VCP valosin containing protein involved_in IDA (PMID:16140914), (PMID:22120668), (PMID:23042605) UniProt PMID:16140914 PMID:22120668 PMID:23042605 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IDA (PMID:32649882) UniProt PMID:32649882 NCBI chr 8:66,628,487...66,667,231
Ensembl chr 8:66,628,487...66,667,231 		JBrowse link
G VRK1 VRK serine/threonine kinase 1 involved_in IDA (PMID:33076429) UniProt PMID:33076429 NCBI chr14:96,797,382...96,881,609
Ensembl chr14:96,797,304...96,954,846 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IMP (PMID:21329877) UniProt PMID:21329877 NCBI chr10:28,532,779...28,623,112
Ensembl chr10:28,532,493...28,623,112 		JBrowse link
G WDR4 WD repeat domain 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr21:42,843,094...42,892,998
Ensembl chr21:42,843,094...42,879,568 		JBrowse link
G WDR48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA		 (PMID:27239033), (PMID:27463890)
(PMID:24001775)		 UniProt
MGI
Ensembl		 PMID:24001775 PMID:27239033 PMID:27463890 GO_REF:0000107 NCBI chr 3:39,052,016...39,096,664
Ensembl chr 3:39,052,013...39,096,671 		JBrowse link
G WDR76 WD repeat domain 76 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr15:43,827,002...43,868,412
Ensembl chr15:43,826,980...43,868,412 		JBrowse link
G WRN WRN RecQ like helicase involved_in IDA (PMID:18203716) UniProt PMID:18203716 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G XIAP X-linked inhibitor of apoptosis involved_in IEP (PMID:18049476) UniProt PMID:18049476 NCBI chr  X:123,859,708...123,913,972
Ensembl chr  X:123,859,712...123,913,972 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15010313) Ensembl
MGI		 PMID:15010313 GO_REF:0000107 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11056294 GO_REF:0000107 RGD:727220 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15979950)
(PMID:16777961)		 Ensembl
MGI		 PMID:15979950 PMID:16777961 GO_REF:0000107 NCBI chr 7:152,644,776...152,676,141
Ensembl chr 7:152,644,776...152,676,193 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in TAS (PMID:7603995) PINC PMID:7603995 NCBI chr14:103,697,617...103,715,451
Ensembl chr14:103,697,609...103,715,504 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IMP (PMID:27248496) UniProt PMID:27248496 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:15979950) MGI PMID:15979950 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IDA (PMID:18280240) UniProt PMID:18280240 NCBI chr11:102,110,447...102,233,424
Ensembl chr11:102,110,447...102,233,424 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA
IMP		 (PMID:18026119) Ensembl
UniProt		 PMID:18026119 GO_REF:0000107 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IMP (PMID:24657165) UniProt PMID:24657165 NCBI chr14:64,503,716...64,533,693
Ensembl chr14:64,503,712...64,533,690 		JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 involved_in IMP (PMID:24726359) UniProt PMID:24726359 NCBI chr 3:141,324,186...141,449,792
Ensembl chr 3:141,324,213...141,449,792 		JBrowse link
G ZBTB4 zinc finger and BTB domain containing 4 involved_in IDA (PMID:19448668) UniProt PMID:19448668 NCBI chr17:7,459,378...7,484,249
Ensembl chr17:7,459,366...7,484,263 		JBrowse link
G ZBTB40 zinc finger and BTB domain containing 40 involved_in IDA (PMID:17525332) UniProt PMID:17525332 NCBI chr 1:22,428,909...22,531,154
Ensembl chr 1:22,428,838...22,531,157 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IMP
IEA		 (PMID:25861989) UniProt PMID:25861989 GO_REF:0000043 NCBI chr 1:37,474,580...37,484,377
Ensembl chr 1:37,474,580...37,484,377 		JBrowse link
G ZDHHC16 zinc finger DHHC-type palmitoyltransferase 16 involved_in ISS
IEA		 UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr10:97,446,175...97,457,370
Ensembl chr10:97,446,170...97,457,370 		JBrowse link
G ZMAT3 zinc finger matrin-type 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:179,017,223...179,072,513
Ensembl chr 3:178,960,121...179,072,215 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15980864), (PMID:16079796), (PMID:21522133) Ensembl
MGI		 PMID:15980864 PMID:16079796 PMID:21522133 GO_REF:0000107 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr12:54,369,136...54,391,298
Ensembl chr12:54,369,133...54,391,298 		JBrowse link
G ZNF432 zinc finger protein 432 involved_in IDA (PMID:37823600) UniProt PMID:37823600 NCBI chr19:52,031,378...52,048,838
Ensembl chr19:52,031,378...52,095,738 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IDA (PMID:22704558), (PMID:22705370), (PMID:22759634) UniProt PMID:22704558 PMID:22705370 PMID:22759634 NCBI chr 2:135,196,969...135,531,218
Ensembl chr 2:135,136,916...135,531,218 		JBrowse link
base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL451136.1 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr 1:45,329,262...45,491,155 JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IDA
IBA
IEA		 (PMID:8932386) CAFA
GO_Central
TreeGrafter		 PMID:8932386 GO_REF:0000033 GO_REF:0000118 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:55,000,363...55,009,057
Ensembl chr  X:55,000,363...55,009,057 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IDA (PMID:18995831) UniProt PMID:18995831 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IMP (PMID:9973627) UniProt PMID:9973627 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238 		JBrowse link
G HMGA1 high mobility group AT-hook 1 involved_in IDA (PMID:19465398) UniProt PMID:19465398 NCBI chr 6:34,236,873...34,246,231
Ensembl chr 6:34,236,873...34,246,231 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:19465398) UniProt PMID:19465398 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:3722031|PMID:17803946) UniProt PMID:17803946 MGI:3722031 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IMP
IBA
IEA		 (PMID:19713937) UniProt
GO_Central
TreeGrafter		 PMID:19713937 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:53,532,096...53,686,719
Ensembl chr  X:53,532,096...53,686,752 		JBrowse link
G LIG1 DNA ligase 1 involved_in IDA (PMID:19589734) BHF-UCL PMID:19589734 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in
acts_upstream_of_or_within		 TAS
ISO
IEA
IBA		 (PMID:10854423)
(PMID:9371767)
(PMID:15177041)		 PINC
MGI
TreeGrafter
GO_Central
InterPro
Ensembl		 PMID:9371767 PMID:10854423 PMID:15177041 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,851 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 1:45,329,242...45,340,440
Ensembl chr 1:45,329,163...45,340,893 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in IEA
IBA
IDA		 (PMID:17611195) InterPro
GO_Central
UniProt		 PMID:17611195 GO_REF:0000002 GO_REF:0000033 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA
IBA
IDA
ISS		 (PMID:23755964) Ensembl
GO_Central
HGNC
UniProt
InterPro		 PMID:23755964 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:177,309,874...177,371,268
Ensembl chr 4:177,309,874...177,362,936 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within
involved_in		 ISO
IEA
TAS		 (PMID:10570187)
(PMID:9207108)
(PMID:9190902)		 RGD
MGI
InterPro
Ensembl
PINC		 PMID:9190902 PMID:9207108 PMID:9801319 PMID:10570187 GO_REF:0000002 GO_REF:0000107 RGD:729091 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:11948190) MGI PMID:11948190 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11948190) Ensembl
MGI		 PMID:11948190 GO_REF:0000107 NCBI chr14:20,343,635...20,357,904
Ensembl chr14:20,343,615...20,357,904 		JBrowse link
G POLB DNA polymerase beta involved_in IMP
IBA
IEA
TAS
IDA		 (PMID:21362556)
(PMID:16600869)		 UniProt
GO_Central
TreeGrafter
Reactome		 PMID:16600869 PMID:21362556 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-73930 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IDA (PMID:9770471) UniProt PMID:9770471 NCBI chr15:89,316,320...89,334,824
Ensembl chr15:89,305,198...89,334,861 		JBrowse link
G POLQ DNA polymerase theta involved_in IDA (PMID:19188258) UniProt PMID:19188258 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PRMT6 protein arginine methyltransferase 6 involved_in TAS (PMID:16600869) UniProt PMID:16600869 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636 		JBrowse link
G RPA1 replication protein A1 involved_in IDA (PMID:9765279) UniProt PMID:9765279 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPA2 replication protein A2 involved_in IDA (PMID:9765279) UniProt PMID:9765279 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPA3 replication protein A3 involved_in IDA
IBA
IEA		 (PMID:9765279) UniProt
GO_Central
TreeGrafter		 PMID:9765279 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IDA (PMID:15518571) GO_Central PMID:15518571 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in IDA
IEA		 (PMID:12161446) HGNC-UCL
Ensembl
InterPro		 PMID:12161446 GO_REF:0000002 GO_REF:0000107 NCBI chr12:54,158,235...54,188,985
Ensembl chr12:54,121,277...54,189,008 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA
IDA
TAS		 (PMID:21862836), (PMID:22327402), (PMID:22573813)
(PMID:9489705)		 Ensembl
UniProt
PINC		 PMID:9489705 PMID:21862836 PMID:22327402 PMID:22573813 GO_REF:0000107 NCBI chr12:103,965,872...103,988,874
Ensembl chr12:103,965,822...103,988,874 		JBrowse link
G UBE3A ubiquitin protein ligase E3A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:25,333,728...25,439,056
Ensembl chr15:25,333,728...25,439,051 		JBrowse link
G UNG uracil DNA glycosylase involved_in ISO
IEA
IDA		 (PMID:12161446) RGD
Ensembl
HGNC
InterPro
UniProt		 PMID:12161446 PMID:12167490 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 RGD:634481 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IMP (PMID:21362556) UniProt PMID:21362556 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887 		JBrowse link
G WRN WRN RecQ like helicase involved_in IDA (PMID:17611195) UniProt PMID:17611195 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in ISO
IEA
IBA
IDA		 (PMID:34102106), (PMID:34811483) RGD
TreeGrafter
GO_Central
UniProt
InterPro
Ensembl		 PMID:17412650 PMID:34102106 PMID:34811483 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2302580 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
base-excision repair, AP site formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC5 ERCC excision repair 5, endonuclease involved_in IDA (PMID:9927729) UniProt PMID:9927729 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in TAS Reactome Reactome:R-HSA-73929 NCBI chr 4:177,309,874...177,371,268
Ensembl chr 4:177,309,874...177,362,936 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA
IBA
IDA		 (PMID:15358233), (PMID:9927729) InterPro
TreeGrafter
GO_Central
UniProt		 PMID:9927729 PMID:15358233 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:103,965,872...103,988,874
Ensembl chr12:103,965,822...103,988,874 		JBrowse link
base-excision repair, AP site formation via deaminated base removal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UNG uracil DNA glycosylase involved_in IDA
IEA
IBA		 (PMID:18973764) UniProt
TreeGrafter
GO_Central		 PMID:18973764 GO_REF:0000033 GO_REF:0000118 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
base-excision repair, DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG3 DNA ligase 3 involved_in ISO
IEA
IBA
TAS
IDA
IMP		 (PMID:19589734)
(PMID:24674627)		 RGD
TreeGrafter
GO_Central
Ensembl
Reactome
BHF-UCL		 PMID:17412650 PMID:19589734 PMID:24674627 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:2302580 Reactome:R-HSA-73931 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
base-excision repair, gap-filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADPRS ADP-ribosylserine hydrolase involved_in TAS Reactome Reactome:R-HSA-110373 NCBI chr 1:36,088,892...36,093,932
Ensembl chr 1:36,088,892...36,093,932 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in TAS Reactome Reactome:R-HSA-73933 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772 		JBrowse link
G BPHL biphenyl hydrolase like involved_in TAS Reactome Reactome:R-HSA-110373 NCBI chr 6:3,118,376...3,153,578
Ensembl chr 6:3,118,374...3,153,578 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in TAS Reactome Reactome:R-HSA-110373 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238 		JBrowse link
G LIG1 DNA ligase 1 involved_in TAS Reactome Reactome:R-HSA-110373 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G LIG3 DNA ligase 3 involved_in TAS Reactome Reactome:R-HSA-5649702 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-5649702 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase involved_in TAS Reactome Reactome:R-HSA-110373 NCBI chr10:49,818,279...49,942,027
Ensembl chr10:49,818,279...49,970,203 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15177179) Ensembl
MGI		 PMID:15177179 GO_REF:0000107 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in TAS Reactome Reactome:R-HSA-5649702 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G POLB DNA polymerase beta acts_upstream_of_or_within
involved_in		 ISO
TAS
IEA		 (PMID:15177179) RGD
MGI
Reactome
Ensembl		 PMID:15177179 PMID:17412650 GO_REF:0000107 RGD:2302580 Reactome:R-HSA-110373 Reactome:R-HSA-110381 Reactome:R-HSA-5649702 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA
IBA		 (PMID:10559260), (PMID:10559261)
(PMID:15177179)		 UniProt
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:10559260 PMID:10559261 PMID:15177179 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IDA
IBA
IEA		 (PMID:10559260) UniProt
GO_Central
TreeGrafter		 PMID:10559260 GO_REF:0000033 GO_REF:0000118 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit acts_upstream_of_or_within IDA (PMID:15177179) MGI PMID:15177179 NCBI chr15:89,316,320...89,334,824
Ensembl chr15:89,305,198...89,334,861 		JBrowse link
G POLL DNA polymerase lambda involved_in IDA (PMID:19806195) UniProt PMID:19806195 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
broken chromosome clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIP2A cellular inhibitor of PP2A involved_in IDA (PMID:37165191), (PMID:37316668) UniProt PMID:37165191 PMID:37316668 NCBI chr 3:108,549,864...108,589,438
Ensembl chr 3:108,549,864...108,589,644 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:37165191), (PMID:37316668) UniProt PMID:37165191 PMID:37316668 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
depurination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPG N-methylpurine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110331 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,851 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110331 NCBI chr 1:45,329,242...45,340,440
Ensembl chr 1:45,329,163...45,340,893 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in TAS Reactome Reactome:R-HSA-110331 NCBI chr 4:177,309,874...177,371,268
Ensembl chr 4:177,309,874...177,362,936 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110331 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
depyrimidination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:54,158,235...54,188,985
Ensembl chr12:54,121,277...54,189,008 		JBrowse link
G TDG thymine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:103,965,872...103,988,874
Ensembl chr12:103,965,822...103,988,874 		JBrowse link
G UNG uracil DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110329 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
DNA alkylation repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:77,672,404...77,708,023
Ensembl chr14:77,672,404...77,708,023 		JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IDA
IBA
IEA		 (PMID:18432238), (PMID:20714506) UniProt
GO_Central
Ensembl		 PMID:18432238 PMID:20714506 GO_REF:0000033 GO_REF:0000107 NCBI chr12:109,088,189...109,093,472
Ensembl chr12:109,088,188...109,093,631 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA
IDA		 (PMID:20714506), (PMID:22055184) InterPro
UniProt		 PMID:20714506 PMID:22055184 GO_REF:0000002 NCBI chr11:43,880,831...43,920,274
Ensembl chr11:43,880,811...43,920,274 		JBrowse link
G ASCC1 activating signal cointegrator 1 complex subunit 1 involved_in NAS
IEA		 (PMID:29997253) ComplexPortal
InterPro		 PMID:29997253 GO_REF:0000002 NCBI chr10:72,096,032...72,217,134
Ensembl chr10:72,096,032...72,217,134 		JBrowse link
G ASCC2 activating signal cointegrator 1 complex subunit 2 involved_in NAS (PMID:29997253) ComplexPortal PMID:29997253 NCBI chr22:29,788,611...29,838,274
Ensembl chr22:29,788,609...29,838,304 		JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 involved_in IDA
NAS		 (PMID:22055184)
(PMID:29997253)		 UniProt
ComplexPortal		 PMID:22055184 PMID:29997253 NCBI chr 6:100,508,194...100,881,329
Ensembl chr 6:100,508,194...100,881,372 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA
IDA		 (PMID:18775698) Ensembl
BHF-UCL
InterPro		 PMID:18775698 GO_REF:0000002 GO_REF:0000107 NCBI chr16:53,703,963...54,121,941
Ensembl chr16:53,701,692...54,158,512 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1554415) RGD
MGI
Ensembl		 PMID:1554415 PMID:15025514 GO_REF:0000107 RGD:2316914 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in TAS (PMID:1645538) PINC PMID:1645538 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,851 		JBrowse link
G OTUD4 OTU deubiquitinase 4 involved_in IDA (PMID:25944111) UniProt PMID:25944111 NCBI chr 4:145,133,650...145,180,589
Ensembl chr 4:145,110,838...145,180,589 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IDA (PMID:25944111) UniProt PMID:25944111 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328 		JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked involved_in IDA (PMID:25944111) UniProt PMID:25944111 NCBI chr  X:41,085,445...41,236,579
Ensembl chr  X:41,085,445...41,236,579 		JBrowse link
DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA		 (PMID:12937170)
(PMID:30886146)		 Ensembl
MGI
GO_Central
UniProt		 PMID:12937170 PMID:30886146 GO_REF:0000033 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA		 (PMID:14657349), (PMID:21705319), (PMID:21777809)
(PMID:12937170)		 UniProt
MGI
GO_Central		 PMID:12937170 PMID:14657349 PMID:21705319 PMID:21777809 GO_REF:0000033 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G ATRIP ATR interacting protein involved_in IEA
TAS		 (PMID:14657349) InterPro
UniProt		 PMID:14657349 GO_REF:0000002 NCBI chr 3:48,446,737...48,467,645
Ensembl chr 3:48,446,710...48,467,645 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in NAS (PMID:14576433) UniProt PMID:14576433 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G CDC5L cell division cycle 5 like involved_in IMP (PMID:24332808) UniProt PMID:24332808 NCBI chr 6:44,387,706...44,450,425
Ensembl chr 6:44,387,706...44,450,425 		JBrowse link
G CEP63 centrosomal protein 63 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:134,485,724...134,782,559
Ensembl chr 3:134,485,699...134,587,789 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA
IMP		 (PMID:10859164)
(PMID:12529385)
(PMID:16963448)
(PMID:19716789)		 InterPro
MGI
UniProt
Ensembl		 PMID:10859164 PMID:12529385 PMID:16963448 PMID:19716789 GO_REF:0000002 GO_REF:0000107 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in ISO
TAS		 (PMID:10617473), (PMID:9889122) RGD
UniProt		 PMID:9889122 PMID:10435585 PMID:10617473 RGD:633752 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CLOCK clock circadian regulator involved_in IMP (PMID:21659603) UniProt PMID:21659603 NCBI chr 4:55,427,903...55,546,909
Ensembl chr 4:55,427,903...55,546,909 		JBrowse link
G CLSPN claspin involved_in IMP (PMID:16963448) UniProt PMID:16963448 NCBI chr 1:35,720,213...35,769,978
Ensembl chr 1:35,720,218...35,769,978 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IMP (PMID:28191891) UniProt PMID:28191891 NCBI chr21:33,577,551...33,588,684
Ensembl chr21:33,559,542...33,588,706 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IMP (PMID:28525742) UniProt PMID:28525742 NCBI chr 3:122,564,338...122,575,203
Ensembl chr 3:122,564,338...122,575,203 		JBrowse link
G E2F1 E2F transcription factor 1 involved_in IMP (PMID:12717439) UniProt PMID:12717439 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:39,934,115...40,035,591
Ensembl chr15:39,934,115...40,035,591 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IMP (PMID:25820262) UniProt PMID:25820262 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G FBXO6 F-box protein 6 involved_in TAS (PMID:19716789) UniProt PMID:19716789 NCBI chr 1:11,664,200...11,674,354
Ensembl chr 1:11,664,200...11,674,354 		JBrowse link
G GNB1L G protein subunit beta 1 like involved_in IMP (PMID:37541219) UniProt PMID:37541219 NCBI chr22:19,783,223...19,854,874
Ensembl chr22:19,783,223...19,854,939 		JBrowse link
G H2AX H2A.X variant histone involved_in
NOT|acts_upstream_of_or_within		 IDA
ISO		 (PMID:17974976)
(PMID:11934988)		 UniProt
MGI		 PMID:11934988 PMID:17974976 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G HINFP histone H4 transcription factor involved_in IMP (PMID:17974976) UniProt PMID:17974976 NCBI chr11:119,121,580...119,136,059
Ensembl chr11:119,121,580...119,136,059 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS
IMP		 (PMID:12529385)
(PMID:9878245)
(PMID:21659603)		 InterPro
MGI
PINC
Ensembl
UniProt		 PMID:9878245 PMID:12529385 PMID:21659603 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:655,939...657,100
Ensembl chr 6:655,939...657,100 		JBrowse link
G INTS7 integrator complex subunit 7 involved_in IMP (PMID:21659603) UniProt PMID:21659603 NCBI chr 1:211,940,403...212,035,557
Ensembl chr 1:211,940,399...212,035,557 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase involved_in IDA (PMID:10891478) UniProt PMID:10891478 NCBI chr 8:55,879,835...56,014,169
Ensembl chr 8:55,879,835...56,014,169 		JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IMP (PMID:11836244) UniProt PMID:11836244 NCBI chr 2:173,075,517...173,268,015
Ensembl chr 2:173,075,435...173,268,015 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12937170) Ensembl
MGI		 PMID:12937170 GO_REF:0000107 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G NBN nibrin acts_upstream_of_or_within IDA (PMID:12529385) MGI PMID:12529385 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IMP (PMID:28525742) UniProt PMID:28525742 NCBI chr 3:122,527,924...122,564,784
Ensembl chr 3:122,527,924...122,564,577 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IMP (PMID:24332808) UniProt PMID:24332808 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12937170) Ensembl
MGI		 PMID:12937170 GO_REF:0000107 NCBI chr12:112,418,947...112,509,918
Ensembl chr12:112,418,351...112,509,918 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA
IBA
IMP		 (PMID:21659603) InterPro
GO_Central
UniProt		 PMID:21659603 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:34,905,260...34,915,504
Ensembl chr 5:34,905,260...34,918,989 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:69,369,293...69,414,801
Ensembl chr 5:69,369,293...69,414,801 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA
IMP
TAS		 (PMID:21659603)
(PMID:8943031)		 InterPro
UniProt
PINC		 PMID:8943031 PMID:21659603 GO_REF:0000002 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA InterPro GO_REF:0000002 NCBI chr12:110,502,331...110,533,556
Ensembl chr12:110,501,655...110,533,556 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA
IBA
IDA
IMP		 (PMID:25602520)
(PMID:21659603)		 InterPro
GO_Central
UniProt		 PMID:21659603 PMID:25602520 GO_REF:0000002 GO_REF:0000033 NCBI chr12:2,876,265...2,889,524
Ensembl chr12:2,876,258...2,889,524 		JBrowse link
G RPA4 replication protein A4 involved_in IDA (PMID:19942684) UniProt PMID:19942684 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467 		JBrowse link
G STK38 serine/threonine kinase 38 involved_in IDA (PMID:32537488) UniProt PMID:32537488 NCBI chr 6:36,493,892...36,547,479
Ensembl chr 6:36,493,892...36,547,479 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17141802) Ensembl
MGI		 PMID:17141802 GO_REF:0000107 NCBI chr15:66,336,191...66,386,717
Ensembl chr15:66,336,191...66,386,746 		JBrowse link
G TIPRL TOR signaling pathway regulator involved_in IMP (PMID:17384681) UniProt PMID:17384681 NCBI chr 1:168,178,962...168,202,109
Ensembl chr 1:168,178,962...168,202,109 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:17575048), (PMID:21777809), (PMID:31135337) UniProt PMID:17575048 PMID:21777809 PMID:31135337 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045533) Ensembl
MGI		 PMID:18045533 GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IDA (PMID:30886146) UniProt PMID:30886146 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IMP
IBA		 (PMID:18662541) UniProt
GO_Central		 PMID:18662541 GO_REF:0000033 NCBI chr11:113,797,875...113,875,572
Ensembl chr11:113,797,874...113,875,572 		JBrowse link
DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER2 alkaline ceramidase 2 involved_in IMP (PMID:28294157), (PMID:29229990) UniProt PMID:28294157 PMID:29229990 NCBI chr 9:19,409,009...19,452,505
Ensembl chr 9:19,409,009...19,452,505 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:77,504,880...77,786,216
Ensembl chr  X:77,504,880...77,786,233 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:75,522,469...75,546,992
Ensembl chr14:75,522,455...75,546,993 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IMP (PMID:16384933) UniProt PMID:16384933 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044 		JBrowse link
G FOXO3 forkhead box O3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383658) Ensembl
MGI		 PMID:15383658 GO_REF:0000107 NCBI chr 6:108,559,825...108,684,774
Ensembl chr 6:108,559,835...108,684,774 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IDA (PMID:14647468) BHF-UCL PMID:14647468 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G MDM4 MDM4 regulator of p53 involved_in IEP (PMID:14660608) UniProt PMID:14660608 NCBI chr 1:204,516,406...204,558,120
Ensembl chr 1:204,516,379...204,558,120 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12878730) Ensembl
MGI		 PMID:12878730 GO_REF:0000107 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227 		JBrowse link
G MUC1 mucin 1, cell surface associated involved_in IDA (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916 		JBrowse link
G MYO6 myosin VI involved_in IDA (PMID:16507995) UniProt PMID:16507995 NCBI chr 6:75,749,239...75,919,537
Ensembl chr 6:75,749,201...75,919,537 		JBrowse link
G NBN nibrin involved_in TAS (PMID:9590181) UniProt PMID:9590181 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NDRG1 N-myc downstream regulated 1 involved_in IEP (PMID:9766676) UniProt PMID:9766676 NCBI chr 8:133,237,175...133,297,252
Ensembl chr 8:133,237,175...133,302,022 		JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (PMID:33323934) MGI PMID:33323934 NCBI chr 5:1,801,407...1,816,048
Ensembl chr 5:1,801,407...1,816,048 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IMP (PMID:15456759), (PMID:17690115) UniProt PMID:15456759 PMID:17690115 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21522133) Ensembl
MGI		 PMID:21522133 GO_REF:0000107 NCBI chr17:60,600,193...60,666,280
Ensembl chr17:60,600,193...60,666,280 		JBrowse link
G SESN2 sestrin 2 involved_in IEA
IMP		 (PMID:18692468) Ensembl
UniProt		 PMID:18692468 GO_REF:0000107 NCBI chr 1:28,259,518...28,282,491
Ensembl chr 1:28,259,518...28,282,491 		JBrowse link
G SP100 SP100 nuclear antigen involved_in IDA (PMID:14647468) BHF-UCL PMID:14647468 NCBI chr 2:230,416,201...230,545,606
Ensembl chr 2:230,415,942...230,545,606 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IDA
ISO
IMP
IEA		 (PMID:15149599)
(PMID:11790307), (PMID:11884608)
(PMID:17476307)
(PMID:16199867)
(PMID:20160708), (PMID:7958916)		 BHF-UCL
MGI
Ensembl		 PMID:7958916 PMID:11790307 PMID:11884608 PMID:15149599 PMID:16199867 More... GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in IDA (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr12:120,443,964...120,446,384
Ensembl chr12:120,443,964...120,446,384 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IMP
IEA
IBA		 (PMID:20096447) UniProt
TreeGrafter
GO_Central		 PMID:20096447 GO_REF:0000033 GO_REF:0000118 NCBI chr16:84,700,000...84,779,922
Ensembl chr16:84,699,986...84,779,922 		JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in TAS Reactome Reactome:R-HSA-69563 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G CASP2 caspase 2 involved_in IMP (PMID:21726810) UniProt PMID:21726810 NCBI chr 7:143,288,351...143,307,696
Ensembl chr 7:143,288,215...143,307,696 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IDA
TAS		 (PMID:15149599) BHF-UCL
Reactome		 PMID:15149599 Reactome:R-HSA-6791312 Reactome:R-HSA-69563 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B involved_in TAS Reactome Reactome:R-HSA-6791312 Reactome:R-HSA-69563 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in TAS Reactome Reactome:R-HSA-69563 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain involved_in IMP
IEA
IBA		 (PMID:21726810) UniProt
TreeGrafter
GO_Central		 PMID:21726810 GO_REF:0000033 GO_REF:0000118 NCBI chr12:93,677,375...93,894,840
Ensembl chr12:93,677,375...93,894,840 		JBrowse link
G E2F7 E2F transcription factor 7 involved_in IDA (PMID:22802528) UniProt PMID:22802528 NCBI chr12:77,021,251...77,065,569
Ensembl chr12:77,021,248...77,065,569 		JBrowse link
G GML glycosylphosphatidylinositol anchored molecule like involved_in TAS (PMID:8934543) PINC PMID:8934543 NCBI chr 8:142,834,801...142,846,851
Ensembl chr 8:142,834,247...142,916,506 		JBrowse link
G GTSE1 G2 and S-phase expressed 1 involved_in NAS (PMID:10974554) UniProt PMID:10974554 NCBI chr22:46,296,870...46,330,810
Ensembl chr22:46,296,870...46,330,810 		JBrowse link
G MDM2 MDM2 proto-oncogene involved_in IMP (PMID:21726810) UniProt PMID:21726810 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
G MUC1 mucin 1, cell surface associated involved_in IDA (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in IDA (PMID:10891498) UniProt PMID:10891498 NCBI chr 3:51,957,454...51,967,466
Ensembl chr 3:51,957,454...51,974,016 		JBrowse link
G PIDD1 p53-induced death domain protein 1 involved_in IMP (PMID:21726810) UniProt PMID:21726810 NCBI chr11:799,184...809,501
Ensembl chr11:799,179...809,753 		JBrowse link
G PLK2 polo like kinase 2 involved_in TAS Reactome Reactome:R-HSA-6791312 NCBI chr 5:58,453,982...58,460,086
Ensembl chr 5:58,453,982...58,460,139 		JBrowse link
G PLK3 polo like kinase 3 involved_in TAS Reactome Reactome:R-HSA-6791312 NCBI chr 1:44,800,377...44,805,990
Ensembl chr 1:44,800,377...44,805,990 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827 		JBrowse link
G PPP2R5C protein phosphatase 2 regulatory subunit B'gamma involved_in IDA (PMID:17245430) UniProt PMID:17245430 NCBI chr14:101,760,573...101,927,992
Ensembl chr14:101,761,709...101,927,989 		JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in IMP (PMID:23235459) UniProt PMID:23235459 NCBI chr10:133,347,373...133,352,683
Ensembl chr10:133,347,368...133,352,683 		JBrowse link
G PTPRVP protein tyrosine phosphatase receptor type V, pseudogene acts_upstream_of_or_within ISO (PMID:16107883) MGI PMID:16107883 NCBI chr 1:202,168,051...202,189,449
Ensembl chr 1:202,168,051...202,189,455
Ensembl chr 1:202,168,051...202,189,455 		JBrowse link
G RBM38 RNA binding motif protein 38 involved_in IDA (PMID:17050675) UniProt PMID:17050675 NCBI chr20:57,391,396...57,409,333
Ensembl chr20:57,391,396...57,409,333 		JBrowse link
G RPL26 ribosomal protein L26 involved_in IMP
IEA		 (PMID:16213212) CAFA
Ensembl		 PMID:16213212 GO_REF:0000107 NCBI chr17:8,377,516...8,383,193
Ensembl chr17:8,377,516...8,383,213 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:16107883)
(PMID:16213212)		 Ensembl
MGI
CAFA		 PMID:16107883 PMID:16213212 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in TAS (PMID:15735003) HGNC-UCL PMID:15735003 NCBI chr12:120,443,964...120,446,384
Ensembl chr12:120,443,964...120,446,384 		JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8738145) Ensembl
MGI		 PMID:8738145 GO_REF:0000107 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10710310) Ensembl
MGI		 PMID:10710310 GO_REF:0000107 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10710310) Ensembl
MGI		 PMID:10710310 GO_REF:0000107 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G FOXM1 forkhead box M1 involved_in IMP (PMID:17101782) UniProt PMID:17101782 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,680...2,877,174 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IDA (PMID:14966270) UniProt PMID:14966270 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G RBM38 RNA binding motif protein 38 involved_in IDA (PMID:17050675) UniProt PMID:17050675 NCBI chr20:57,391,396...57,409,333
Ensembl chr20:57,391,396...57,409,333 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in IDA (PMID:18056458) UniProt PMID:18056458 NCBI chr15:63,148,249...63,157,477
Ensembl chr15:63,125,872...63,158,021 		JBrowse link
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in IMP
IBA		 (PMID:15042092) UniProt
GO_Central		 PMID:15042092 GO_REF:0000033 NCBI chr  X:84,058,346...84,188,499
Ensembl chr  X:84,058,346...84,206,356 		JBrowse link
G TFAP4 transcription factor AP-4 involved_in IDA (PMID:18818310) UniProt PMID:18818310 NCBI chr16:4,257,186...4,273,023
Ensembl chr16:4,257,186...4,273,075 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP
IDA		 (PMID:10710310)
(PMID:16479015)
(PMID:16213212)		 Ensembl
MGI
UniProt
CAFA		 PMID:10710310 PMID:16213212 PMID:16479015 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
DNA damage response, signal transduction resulting in transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IDA (PMID:17296730) UniProt PMID:17296730 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IDA (PMID:10802669), (PMID:26240375) UniProt PMID:10802669 PMID:26240375 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G BLM BLM RecQ like helicase involved_in IDA (PMID:21325134) UniProt PMID:21325134 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IDA (PMID:21325134) UniProt PMID:21325134 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IDA (PMID:26807646) UniProt PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,498...69,244,020 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:241,847,986...241,889,939
Ensembl chr 1:241,847,967...241,895,148 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in TAS
IMP
NAS		 (PMID:23080121)
(PMID:26512707)		 Reactome
UniProt
ComplexPortal		 PMID:23080121 PMID:26512707 Reactome:R-HSA-5693608 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G NBN nibrin involved_in NAS
IDA		 (PMID:26512707)
(PMID:16622404)		 ComplexPortal
UniProt		 PMID:16622404 PMID:26512707 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in NAS
IDA		 (PMID:26512707)
(PMID:16622404), (PMID:21757780)		 ComplexPortal
UniProt		 PMID:16622404 PMID:21757780 PMID:26512707 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
G SETMAR SET domain and mariner transposase fusion gene involved_in IDA
IBA
IEA		 (PMID:21491884) UniProt
GO_Central
TreeGrafter		 PMID:21491884 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:4,303,369...4,317,265
Ensembl chr 3:4,303,332...4,317,265 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IMP (PMID:22960744) UniProt PMID:22960744 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IMP (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IMP (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in IDA (PMID:34937945) UniProt PMID:34937945 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G LOC130134321 SLX1A-like involved_in IMP (PMID:19595721) UniProt PMID:19595721
G RAD52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IEA
IDA		 (PMID:19506022) Ensembl
MGI		 PMID:19506022 GO_REF:0000107 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IMP
IBA		 (PMID:18716619), (PMID:19202191) UniProt
GO_Central		 PMID:18716619 PMID:19202191 GO_REF:0000033 NCBI chr18:22,914,139...23,026,486
Ensembl chr18:22,798,261...23,026,488 		JBrowse link
G RBBP8NL RBBP8 N-terminal like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:62,410,237...62,427,539
Ensembl chr20:62,410,237...62,427,539 		JBrowse link
G RNF138 ring finger protein 138 involved_in IMP
IEA
IBA		 (PMID:26502057) UniProt
TreeGrafter
GO_Central		 PMID:26502057 GO_REF:0000033 GO_REF:0000118 NCBI chr18:32,091,874...32,131,561
Ensembl chr18:32,091,874...32,131,561 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IMP (PMID:19595721) UniProt PMID:19595721 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,875...30,197,561 		JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit involved_in IMP (PMID:19595721) UniProt PMID:19595721 NCBI chr16:29,454,533...29,458,220
Ensembl chr16:29,454,533...29,458,219 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IMP (PMID:19595721) UniProt PMID:19595721 NCBI chr16:3,581,181...3,611,606
Ensembl chr16:3,581,181...3,611,606 		JBrowse link
DNA ligation involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS
IDA		 (PMID:9823897)
(PMID:12517771), (PMID:17290226)		 InterPro
MGI
UniProt
Ensembl		 PMID:9823897 PMID:12517771 PMID:17290226 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IDA (PMID:19056826) UniProt PMID:19056826 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,355...219,160,869 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IDA (PMID:15385968) UniProt PMID:15385968 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IDA
IBA		 (PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:28453785) UniProt
GO_Central		 PMID:12517771 PMID:15385968 PMID:17290226 PMID:28453785 GO_REF:0000033 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMC1 DNA meiotic recombinase 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr22:38,509,147...38,570,183
Ensembl chr22:38,518,948...38,570,204 		JBrowse link
G RAD51 RAD51 recombinase involved_in IMP
IBA
IEA		 (PMID:26681308) UniProt
GO_Central
TreeGrafter		 PMID:26681308 GO_REF:0000033 GO_REF:0000118 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA InterPro GO_REF:0000002 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:83,459,517...83,485,100
Ensembl chr 4:83,459,517...83,523,348 		JBrowse link
G AC004223.3 RAD51L3-RFFL readthrough involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 Ensembl chr17:35,011,349...35,121,493 JBrowse link
G AC087632.2 novel protein involved_in IEA UniProt GO_REF:0000043 Ensembl chr15:64,181,180...64,381,440 JBrowse link
G ACTL6A actin like 6A involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR5 actin related protein 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G ADPRS ADP-ribosylserine hydrolase involved_in IEA
IMP		 (PMID:30045870) UniProt PMID:30045870 GO_REF:0000043 NCBI chr 1:36,088,892...36,093,932
Ensembl chr 1:36,088,892...36,093,932 		JBrowse link
G AL451136.1 novel protein involved_in IEA UniProt GO_REF:0000043 Ensembl chr 1:45,329,262...45,491,155 JBrowse link
G ALKBH1 alkB homolog 1, histone H2A dioxygenase involved_in IEA
IDA		 (PMID:19959401) UniProt PMID:19959401 GO_REF:0000043 NCBI chr14:77,672,404...77,708,023
Ensembl chr14:77,672,404...77,708,023 		JBrowse link
G ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:109,088,189...109,093,472
Ensembl chr12:109,088,188...109,093,631 		JBrowse link
G ALKBH3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase involved_in IEA UniProt GO_REF:0000043 NCBI chr11:43,880,831...43,920,274
Ensembl chr11:43,880,811...43,920,274 		JBrowse link
G ANKLE1 ankyrin repeat and LEM domain containing 1 NOT|involved_in ISO
IEA		 (MGI:5800654|PMID:27010503) UniProt
UniProt		 PMID:27010503 GO_REF:0000043 MGI:5800654 NCBI chr19:17,281,901...17,287,646
Ensembl chr19:17,281,645...17,287,646 		JBrowse link
G AP5S1 adaptor related protein complex 5 subunit sigma 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:3,820,547...3,828,838
Ensembl chr20:3,820,524...3,828,838 		JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:4,775,623...4,794,397
Ensembl chr 7:4,775,615...4,794,397 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IDA
IEA		 (PMID:1627644), (PMID:9560228) UniProt
InterPro		 PMID:1627644 PMID:9560228 GO_REF:0000002 GO_REF:0000043 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772 		JBrowse link
G APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:55,000,363...55,009,057
Ensembl chr  X:55,000,363...55,009,057 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IEA
IDA		 (PMID:21211722), (PMID:30104678) UniProt PMID:21211722 PMID:30104678 GO_REF:0000043 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G APTX aprataxin involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:32,972,616...33,025,120
Ensembl chr 9:32,886,601...33,025,130 		JBrowse link
G ASCC1 activating signal cointegrator 1 complex subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:72,096,032...72,217,134
Ensembl chr10:72,096,032...72,217,134 		JBrowse link
G ASCC2 activating signal cointegrator 1 complex subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:29,788,611...29,838,274
Ensembl chr22:29,788,609...29,838,304 		JBrowse link
G ASCC3 activating signal cointegrator 1 complex subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:100,508,194...100,881,329
Ensembl chr 6:100,508,194...100,881,372 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone acts_upstream_of_or_within IDA (PMID:11897662) MGI PMID:11897662 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15542845)
(PMID:11679583)
(PMID:15364958)		 Ensembl
MGI
InterPro		 PMID:11679583 PMID:15364958 PMID:15542845 GO_REF:0000002 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATR ATR serine/threonine kinase involved_in
acts_upstream_of_or_within		 TAS
IBA
ISO
IEA		 (PMID:8610130)
(PMID:15364958)		 PINC
GO_Central
MGI
UniProt		 PMID:8610130 PMID:15364958 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G ATRIP ATR interacting protein involved_in IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr 3:48,446,737...48,467,645
Ensembl chr 3:48,446,710...48,467,645 		JBrowse link
G ATRX ATRX chromatin remodeler involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:77,504,880...77,786,216
Ensembl chr  X:77,504,880...77,786,233 		JBrowse link
G AUNIP aurora kinase A and ninein interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:25,831,906...25,859,457
Ensembl chr 1:25,831,913...25,859,458 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BACH1 BTB domain and CNC homolog 1 involved_in IMP (PMID:11301010) CACAO PMID:11301010 NCBI chr21:29,298,922...29,361,894
Ensembl chr21:29,194,071...29,630,751 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 involved_in IEA
NAS		 (PMID:22369660) UniProt
ComplexPortal		 PMID:22369660 GO_REF:0000043 NCBI chr 2:214,725,646...214,809,683
Ensembl chr 2:214,725,646...214,809,683 		JBrowse link
G BCCIP BRCA2 and CDKN1A interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr10:125,823,546...125,853,695
Ensembl chr10:125,823,546...125,853,695 		JBrowse link
G BIVM-ERCC5 BIVM-ERCC5 readthrough involved_in IEA UniProt GO_REF:0000043 NCBI chr13:102,807,146...102,875,995
Ensembl chr13:102,799,110...102,875,994 		JBrowse link
G BLM BLM RecQ like helicase involved_in
acts_upstream_of_or_within		 IEA
ISO
NAS		 (PMID:15364958)
(PMID:7585968)		 InterPro
MGI
UniProt		 PMID:7585968 PMID:15364958 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BOD1L1 biorientation of chromosomes in cell division 1 like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:13,568,738...13,627,725
Ensembl chr 4:13,568,738...13,627,725 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA
NAS		 (PMID:22369660) UniProt
ComplexPortal
InterPro		 PMID:22369660 GO_REF:0000002 GO_REF:0000043 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA UniProt GO_REF:0000043 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA
NAS		 (PMID:22369660) UniProt
ComplexPortal		 PMID:22369660 GO_REF:0000043 GO_REF:0000117 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 involved_in TAS (PMID:8944033) PINC PMID:8944033 NCBI chr 1:203,305,519...203,309,602
Ensembl chr 1:203,305,491...203,309,602 		JBrowse link
G CDC14B cell division cycle 14B involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:96,490,939...96,619,843
Ensembl chr 9:96,490,241...96,619,843 		JBrowse link
G CDC5L cell division cycle 5 like involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:44,387,706...44,450,425
Ensembl chr 6:44,387,706...44,450,425 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in TAS (PMID:21655336) UniProt PMID:21655336 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852 		JBrowse link
G CDK2 cyclin dependent kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789 		JBrowse link
G CDK7 cyclin dependent kinase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:69,234,795...69,277,430
Ensembl chr 5:69,234,795...69,277,430 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792 		JBrowse link
G CENPS centromere protein S involved_in IDA
IEA		 (PMID:20347429) UniProt PMID:20347429 GO_REF:0000043 NCBI chr 1:10,430,433...10,442,808
Ensembl chr 1:10,430,433...10,442,808 		JBrowse link
G CENPS-CORT CENPS-CORT readthrough involved_in IDA
IEA		 (PMID:20347429) UniProt PMID:20347429 GO_REF:0000043 NCBI chr 1:10,430,433...10,452,153
Ensembl chr 1:10,430,102...10,452,153 		JBrowse link
G CENPX centromere protein X involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:82,018,703...82,022,878
Ensembl chr17:82,018,702...82,024,107 		JBrowse link
G CEP164 centrosomal protein 164 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:117,321,778...117,413,266
Ensembl chr11:117,314,557...117,413,266 		JBrowse link
G CETN2 centrin 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:152,826,994...152,830,757
Ensembl chr  X:152,826,994...152,830,757 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A involved_in IEA UniProt GO_REF:0000043 NCBI chr19:4,402,640...4,450,830
Ensembl chr19:4,402,640...4,445,018 		JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B involved_in IEA UniProt GO_REF:0000043 NCBI chr21:36,385,392...36,419,015
Ensembl chr21:36,385,392...36,419,015 		JBrowse link
G CHD1L chromodomain helicase DNA binding protein 1 like involved_in TAS
IDA
IEA		 (PMID:19661379)
(PMID:34486521)		 UniProt
InterPro		 PMID:19661379 PMID:34486521 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:147,172,747...147,295,762
Ensembl chr 1:147,242,654...147,295,765 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:15364958)
(PMID:19716789)		 UniProt
MGI
Ensembl		 PMID:15364958 PMID:19716789 GO_REF:0000043 GO_REF:0000107 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit involved_in IMP (PMID:16332175) UniProt PMID:16332175 NCBI chr20:63,343,223...63,361,349
Ensembl chr20:63,343,223...63,378,401 		JBrowse link
G CINP cyclin dependent kinase 2 interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr14:102,348,282...102,362,890
Ensembl chr14:102,341,102...102,362,916 		JBrowse link
G CLSPN claspin involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:35,720,213...35,769,978
Ensembl chr 1:35,720,218...35,769,978 		JBrowse link
G CSNK1E casein kinase 1 epsilon involved_in TAS (PMID:7797465) PINC PMID:7797465 NCBI chr22:38,290,691...38,318,084
Ensembl chr22:38,290,691...38,318,084 		JBrowse link
G CTBP1-DT CTBP1 divergent transcript involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:1,249,440...1,253,007
Ensembl chr 4:1,248,877...1,288,856 		JBrowse link
G CUL4A cullin 4A involved_in IEA UniProt GO_REF:0000043 NCBI chr13:113,208,193...113,267,108
Ensembl chr13:113,208,193...113,267,108 		JBrowse link
G CUL4B cullin 4B involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:120,523,858...120,575,532
Ensembl chr  X:120,505,920...120,604,074 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:135,092,303...135,172,469
Ensembl chr 7:135,092,363...135,170,795 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:113,834,725...113,854,394
Ensembl chr10:113,834,725...113,854,383 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,904,619...113,914,086 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA UniProt GO_REF:0000043 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA
IBA
TAS		 (PMID:8798680) UniProt
GO_Central
PINC		 PMID:8798680 GO_REF:0000033 GO_REF:0000043 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA
IBA
TAS		 (PMID:8798680) InterPro
GO_Central
UniProt
PINC		 PMID:8798680 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:44,213,471...44,220,673
Ensembl chr 1:44,213,455...44,220,681 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr22:38,509,147...38,570,183
Ensembl chr22:38,518,948...38,570,204 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr10:96,304,434...96,338,564
Ensembl chr10:96,304,409...96,338,564 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase involved_in IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:122,564,338...122,575,203
Ensembl chr 3:122,564,338...122,575,203 		JBrowse link
G DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B involved_in IEA UniProt GO_REF:0000043 NCBI chr19:39,825,350...39,834,162
Ensembl chr19:39,825,350...39,834,201 		JBrowse link
G EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:36,153,254...36,301,538
Ensembl chr 7:36,153,254...36,301,538 		JBrowse link
G EID3 EP300 interacting inhibitor of differentiation 3 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr12:104,303,739...104,305,205
Ensembl chr12:104,303,739...104,305,205 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr17:50,373,229...50,381,483
Ensembl chr17:50,373,220...50,381,483 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr16:1,772,810...1,781,702
Ensembl chr16:1,772,810...1,781,708 		JBrowse link
G EMSY EMSY transcriptional repressor, BRCA2 interacting involved_in IEA UniProt GO_REF:0000043 NCBI chr11:76,445,018...76,553,031
Ensembl chr11:76,444,923...76,553,031 		JBrowse link
G ENDOV endonuclease V involved_in ISS
IEA		 UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr17:80,415,167...80,438,086
Ensembl chr17:80,415,165...80,438,086 		JBrowse link
G EP400 E1A binding protein p400 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:131,949,942...132,080,460
Ensembl chr12:131,949,942...132,080,460 		JBrowse link
G EPC2 enhancer of polycomb homolog 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:148,644,751...148,787,569
Ensembl chr 2:148,644,440...148,787,569 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within
involved_in		 IMP
IEA		 (PMID:25538220) MGI
UniProt
InterPro
Ensembl		 PMID:25538220 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11950998) UniProt
MGI
Ensembl		 PMID:11950998 GO_REF:0000043 GO_REF:0000107 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IMP
IEA		 (PMID:2167179) UniProt PMID:2167179 GO_REF:0000043 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IGI
IMP		 (PMID:14729965)
(PMID:17055345)
(PMID:19596235)		 Ensembl
MGI
UniProt
BHF-UCL
InterPro		 PMID:14729965 PMID:17055345 PMID:19596235 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15082767) UniProt
MGI		 PMID:15082767 GO_REF:0000043 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:10806208)
(PMID:12447686), (PMID:17213818)
(PMID:26218421)		 Ensembl
MGI
UniProt		 PMID:10806208 PMID:12447686 PMID:17213818 PMID:26218421 GO_REF:0000043 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:95,875,691...96,041,092
Ensembl chr 9:95,871,264...96,121,154 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:67,397,333...67,412,089
Ensembl chr 2:67,397,322...67,412,089 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,498...69,244,020 		JBrowse link
G EXO1 exonuclease 1 involved_in IEA
TAS		 (PMID:10364235) UniProt
PINC		 PMID:10364235 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:241,847,986...241,889,939
Ensembl chr 1:241,847,967...241,895,148 		JBrowse link
G EXO5 exonuclease 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:40,508,767...40,516,038
Ensembl chr 1:40,508,741...40,516,038 		JBrowse link
G EXOSC10 exosome component 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:11,066,618...11,099,869
Ensembl chr 1:11,066,618...11,099,869 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:46,894,843...47,188,844
Ensembl chr20:46,894,624...47,188,844 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:27,970,344...28,088,610
Ensembl chr 1:27,970,344...28,088,637 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:133,240,593...133,532,128
Ensembl chr 6:133,240,514...133,532,128 		JBrowse link
G FAAP100 FA core complex associated protein 100 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:81,539,891...81,553,133
Ensembl chr17:81,539,885...81,553,961 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:2,184,477...2,212,720
Ensembl chr 1:2,184,461...2,212,720 		JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:32,972,242...32,978,229
Ensembl chr19:32,972,209...32,978,229 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA UniProt GO_REF:0000043 NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IEA
IMP		 (PMID:20603073) UniProt
InterPro		 PMID:20603073 GO_REF:0000002 GO_REF:0000043 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108 		JBrowse link
G FANCA FA complementation group A involved_in IEA
TAS		 (PMID:8896564) UniProt
PINC		 PMID:8896564 GO_REF:0000043 NCBI chr16:89,737,549...89,816,647
Ensembl chr16:89,726,683...89,816,977 		JBrowse link
G FANCB FA complementation group B involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G FANCC FA complementation group C involved_in TAS
IEA		 (PMID:1574115) PINC
UniProt		 PMID:1574115 GO_REF:0000043 NCBI chr 9:95,099,054...95,317,709
Ensembl chr 9:95,099,054...95,426,796 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,370...10,101,932 		JBrowse link
G FANCE FA complementation group E involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:35,452,338...35,467,102
Ensembl chr 6:35,452,338...35,467,104 		JBrowse link
G FANCF FA complementation group F involved_in IEA UniProt GO_REF:0000043 NCBI chr11:22,622,533...22,625,823
Ensembl chr11:22,622,533...22,625,823 		JBrowse link
G FANCG FA complementation group G involved_in TAS
IEA		 (PMID:9256465) PINC
UniProt		 PMID:9256465 GO_REF:0000043 NCBI chr 9:35,073,839...35,079,942
Ensembl chr 9:35,073,835...35,080,004 		JBrowse link
G FANCI FA complementation group I involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:89,243,979...89,317,259
Ensembl chr15:89,243,945...89,317,261 		JBrowse link
G FANCL FA complementation group L involved_in IMP
IBA
IEA		 (PMID:16916645) UniProt
GO_Central		 PMID:16916645 GO_REF:0000033 GO_REF:0000043 NCBI chr 2:58,159,243...58,241,380
Ensembl chr 2:58,159,243...58,241,410 		JBrowse link
G FANCM FA complementation group M involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr14:45,135,930...45,200,890
Ensembl chr14:45,135,930...45,200,890 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IEA
IDA		 (PMID:23319600) UniProt PMID:23319600 GO_REF:0000043 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594 		JBrowse link
G FBXO6 F-box protein 6 involved_in IEA
TAS		 (PMID:19716789) UniProt PMID:19716789 GO_REF:0000043 NCBI chr 1:11,664,200...11,674,354
Ensembl chr 1:11,664,200...11,674,354 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:12861020)
(PMID:8007985)		 UniProt
MGI
PINC		 PMID:8007985 PMID:12861020 GO_REF:0000043 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238 		JBrowse link
G FH fumarate hydratase involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,511...241,519,799 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IDA (PMID:24813610) UniProt PMID:24813610 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125 		JBrowse link
G FOXM1 forkhead box M1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,680...2,877,174 		JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:3,506,311...3,538,334
Ensembl chr19:3,506,311...3,538,334 		JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in TAS (PMID:7973727) PINC PMID:7973727 NCBI chr 1:67,685,201...67,688,334
Ensembl chr 1:67,685,201...67,688,334 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:17,753,278...17,788,946
Ensembl chr 2:17,753,858...17,788,946 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 involved_in IEA
IBA
TAS		 (PMID:9118947) UniProt
GO_Central
TreeGrafter
PINC		 PMID:9118947 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr11:18,322,567...18,367,045
Ensembl chr11:18,322,295...18,367,045 		JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H2C_2 GTF2H2 family member C, copy 2 involved_in IEA UniProt GO_REF:0000043
G GTF2H3 general transcription factor IIH subunit 3 involved_in TAS
IEA		 (PMID:8194529) PINC
UniProt		 PMID:8194529 GO_REF:0000043 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA
TAS		 (PMID:9118947) UniProt
PINC		 PMID:9118947 GO_REF:0000043 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G H2AX H2A.X variant histone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11934988)
(PMID:15364958)		 UniProt
MGI
Ensembl		 PMID:11934988 PMID:15364958 GO_REF:0000043 GO_REF:0000107 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G HDAC10 histone deacetylase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:50,245,183...50,251,265
Ensembl chr22:50,245,183...50,251,405 		JBrowse link
G HDAC9 histone deacetylase 9 acts_upstream_of_or_within ISO (PMID:21746928) MGI PMID:21746928 NCBI chr 7:18,086,825...19,002,416
Ensembl chr 7:18,086,949...19,002,416 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:4,472,297...4,502,207
Ensembl chr19:4,472,297...4,502,208 		JBrowse link
G HELB DNA helicase B involved_in IEA UniProt GO_REF:0000043 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,493...66,343,643 		JBrowse link
G HELQ helicase, POLQ like involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:28,111,040...28,322,179
Ensembl chr15:28,111,040...28,322,179 		JBrowse link
G HINFP histone H4 transcription factor involved_in IMP (PMID:17974976) UniProt PMID:17974976 NCBI chr11:119,121,580...119,136,059
Ensembl chr11:119,121,580...119,136,059 		JBrowse link
G HLTF helicase like transcription factor involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:149,030,063...149,086,533
Ensembl chr 3:149,030,127...149,086,554 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HPF1 histone PARylation factor 1 involved_in IEA
IDA		 (PMID:32028527), (PMID:34108479) UniProt PMID:32028527 PMID:34108479 GO_REF:0000043 NCBI chr 4:169,729,470...169,757,944
Ensembl chr 4:169,729,470...169,757,944 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA UniProt GO_REF:0000043 NCBI chr17:44,141,930...44,162,476
Ensembl chr17:44,141,906...44,162,476 		JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:144,291,604...144,314,720
Ensembl chr 8:144,291,591...144,314,720 		JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A acts_upstream_of_or_within ISO (PMID:14701760) MGI PMID:14701760 NCBI chr 6:31,815,543...31,817,942
Ensembl chr 6:31,815,543...31,817,946 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:136,497,229...136,512,346
Ensembl chr  X:136,497,079...136,512,346 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in TAS (PMID:9872989) PINC PMID:9872989 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:53,532,096...53,686,719
Ensembl chr  X:53,532,096...53,686,752 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IEA
IBA
IMP		 (PMID:19605351) UniProt
GO_Central
InterPro		 PMID:19605351 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 9:112,683,926...112,718,117
Ensembl chr 9:112,683,926...112,718,149 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INO80B INO80 complex subunit B involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944 		JBrowse link
G INO80C INO80 complex subunit C involved_in IEA UniProt GO_REF:0000043 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303 		JBrowse link
G INO80E INO80 complex subunit E involved_in IEA UniProt GO_REF:0000043 NCBI chr16:29,996,241...30,005,791
Ensembl chr16:29,995,715...30,005,793 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IEA
IMP		 (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 GO_REF:0000043 NCBI chr 1:153,728,050...153,774,808
Ensembl chr 1:153,728,050...153,774,808 		JBrowse link
G JMY junction mediating and regulatory protein, p53 cofactor involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:79,236,131...79,327,211
Ensembl chr 5:79,236,131...79,327,211 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:49,788,681...49,835,026
Ensembl chr17:49,788,624...49,835,026 		JBrowse link
G KIF22 kinesin family member 22 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:29,790,751...29,805,385
Ensembl chr16:29,790,727...29,805,385 		JBrowse link
G KIN Kin17 DNA and RNA binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr10:7,750,962...7,787,993
Ensembl chr10:7,750,962...7,787,993 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr11:68,154,863...68,213,648
Ensembl chr11:68,154,863...68,213,852 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr19:55,339,876...55,348,121
Ensembl chr19:55,339,853...55,348,121 		JBrowse link
G LIG1 DNA ligase 1 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
involved_in		 ISO
IEA
TAS		 (PMID:21390131)
(PMID:11896201)
(PMID:8696349)		 RGD
MGI
UniProt
InterPro
PINC		 PMID:1730240 PMID:8696349 PMID:11896201 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 RGD:724410 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G LIG3 DNA ligase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21390131)
(PMID:11779495)		 UniProt
MGI
InterPro
Ensembl		 PMID:11779495 PMID:21390131 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G LOC130134321 SLX1A-like involved_in IMP
IEA		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) UniProt
InterPro		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104
G MACROH2A1 macroH2A.1 histone involved_in IDA (PMID:21211722) UniProt PMID:21211722 NCBI chr 5:135,334,381...135,399,887
Ensembl chr 5:135,334,381...135,399,914 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in IEA
TAS		 (PMID:10097147) InterPro
PINC
UniProt		 PMID:10097147 GO_REF:0000002 GO_REF:0000043 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IEA UniProt GO_REF:0000043 NCBI chr20:5,950,652...5,998,977
Ensembl chr20:5,950,652...5,998,977 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:66,870,771...66,926,382
Ensembl chr 8:66,870,749...66,922,048 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:49,558,299...49,568,142
Ensembl chr12:49,556,544...49,568,145 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:30,699,807...30,717,281
Ensembl chr 6:30,699,807...30,717,447 		JBrowse link
G MEN1 menin 1 involved_in NAS (PMID:12874027) UniProt PMID:12874027 NCBI chr11:64,803,516...64,811,294
Ensembl chr11:64,803,510...64,811,294 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr20:17,968,590...17,991,122
Ensembl chr20:17,969,018...17,991,122 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:13679151) Ensembl
MGI
GO_Central
TreeGrafter
UniProt
InterPro		 PMID:13679151 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15480418)
(PMID:13679151)		 Ensembl
MGI
UniProt		 PMID:13679151 PMID:15480418 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MLH3 mutL homolog 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:75,013,775...75,051,467
Ensembl chr14:75,013,769...75,051,532 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr10:97,458,324...97,498,794
Ensembl chr10:97,458,324...97,498,794 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:97,142,161...97,284,035
Ensembl chr 6:97,142,161...97,283,217 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:60,734,761...60,969,965
Ensembl chr14:60,734,742...60,969,965 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139 		JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158 		JBrowse link
G MPG N-methylpurine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr16:77,007...85,846
Ensembl chr16:77,007...85,851 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA
TAS		 (PMID:9705271), (PMID:9931460) UniProt
PINC		 PMID:9705271 PMID:9931460 GO_REF:0000043 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA		 (PMID:12687013)
(PMID:8942985)		 UniProt
MGI
BHF-UCL
Ensembl		 PMID:8942985 PMID:12687013 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH3 mutS homolog 3 involved_in IEA
IDA		 (PMID:8942985) UniProt
BHF-UCL		 PMID:8942985 GO_REF:0000043 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815 		JBrowse link
G MSH5 mutS homolog 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,740,005...31,762,676
Ensembl chr 6:31,739,677...31,762,676 		JBrowse link
G MSH5-SAPCD1 MSH5-SAPCD1 readthrough (NMD candidate) involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:31,739,948...31,764,850
Ensembl chr 6:31,740,020...31,764,851 		JBrowse link
G MSH6 mutS homolog 6 involved_in IDA
IEA		 (PMID:8942985) BHF-UCL
UniProt		 PMID:8942985 GO_REF:0000043 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IMP
IEA		 (PMID:19596235) UniProt PMID:19596235 GO_REF:0000043 GO_REF:0000117 NCBI chr11:65,859,674...65,867,653
Ensembl chr11:65,857,126...65,867,653 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in TAS
IEA		 (PMID:8682794) PINC
UniProt		 PMID:8682794 GO_REF:0000043 NCBI chr 1:45,329,242...45,340,440
Ensembl chr 1:45,329,163...45,340,893 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IEA
IMP		 (PMID:19683501) UniProt PMID:19683501 GO_REF:0000043 NCBI chr 2:191,678,136...191,686,943
Ensembl chr 2:191,678,068...191,741,097 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IMP
ISS
IEA		 (PMID:18449195), (PMID:19683501) UniProt
BHF-UCL		 PMID:18449195 PMID:19683501 GO_REF:0000024 GO_REF:0000043 NCBI chr12:56,222,015...56,229,854
Ensembl chr12:56,222,015...56,229,854 		JBrowse link
G NBN nibrin involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12200441) UniProt
MGI
Ensembl		 PMID:12200441 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr 4:177,309,874...177,371,268
Ensembl chr 4:177,309,874...177,362,936 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr11:129,863,636...129,895,578
Ensembl chr11:129,863,636...129,895,590 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,355...219,160,869 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 involved_in IMP (PMID:26945015) UniProt PMID:26945015 NCBI chr16:1,770,320...1,771,543
Ensembl chr16:1,770,320...1,771,561 		JBrowse link
G NONO non-POU domain containing octamer binding involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:71,283,635...71,301,168
Ensembl chr  X:71,254,814...71,301,522 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in IMP (PMID:21741933) UniProt PMID:21741933 NCBI chr19:47,745,546...47,757,058
Ensembl chr19:47,745,546...47,757,058 		JBrowse link
G NPM1 nucleophosmin 1 involved_in IDA (PMID:19188445) UniProt PMID:19188445 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr16:27,224,994...27,268,772
Ensembl chr16:27,224,994...27,268,772 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:125,091,860...125,367,120
Ensembl chr 8:125,091,679...125,367,120 		JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in IMP
IEA		 (PMID:27427983) UniProt PMID:27427983 GO_REF:0000043 NCBI chr15:29,264,989...29,269,822
Ensembl chr15:29,264,989...29,269,822 		JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in IEA
IBA		 UniProt
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 NCBI chr10:121,957,091...121,975,217
Ensembl chr10:121,957,091...121,975,217 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:205,712,822...205,750,182
Ensembl chr 1:205,712,822...205,750,182 		JBrowse link
G NUDT1 nudix hydrolase 1 involved_in IC (PMID:10373420) UniProt PMID:10373420 NCBI chr 7:2,242,226...2,251,145
Ensembl chr 7:2,242,226...2,251,146 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12874039)
(PMID:12447686), (PMID:17213818)
(PMID:11532868), (PMID:12447686), (PMID:17213818)		 InterPro
MGI
UniProt
Ensembl		 PMID:11532868 PMID:12447686 PMID:12874039 PMID:17213818 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:29,816,152...29,822,489
Ensembl chr16:29,816,152...29,822,489 		JBrowse link
G PALB2 partner and localizer of BRCA2 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:23,603,165...23,641,310
Ensembl chr16:23,603,160...23,641,321 		JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IDA
IEA		 (PMID:28596309) UniProt PMID:28596309 GO_REF:0000043 NCBI chr 1:7,961,711...7,985,505
Ensembl chr 1:7,954,291...7,985,505 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in TAS
IEA
IDA		 (PMID:10958667), (PMID:17396150)
(PMID:30104678), (PMID:30675909), (PMID:31796734), (PMID:32028527), (PMID:33186521), (PMID:34874266)		 PINC
TreeGrafter
UniProt		 PMID:10958667 PMID:17396150 PMID:30104678 PMID:30675909 PMID:31796734 More... GO_REF:0000043 GO_REF:0000118 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:143,977,158...144,012,764
Ensembl chr 8:143,977,153...144,012,772 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA
IDA		 (PMID:30104678), (PMID:34108479) UniProt PMID:30104678 PMID:34108479 GO_REF:0000043 NCBI chr14:20,343,635...20,357,904
Ensembl chr14:20,343,615...20,357,904 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:51,942,363...51,948,867
Ensembl chr 3:51,942,345...51,948,867 		JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 involved_in NAS
TAS		 (PMID:12101391)
(PMID:10100603)		 UniProt
PINC		 PMID:10100603 PMID:12101391 NCBI chr13:24,420,931...24,512,778
Ensembl chr13:24,420,931...24,512,778 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:122,527,924...122,564,784
Ensembl chr 3:122,527,924...122,564,577 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA UniProt GO_REF:0000043 NCBI chr12:102,120,183...102,197,520
Ensembl chr12:102,120,183...102,197,520 		JBrowse link
G PAXIP1 PAX interacting protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:136,992,422...136,993,976
Ensembl chr 9:136,992,422...136,993,984 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IEA UniProt GO_REF:0000043 NCBI chr15:64,364,304...64,387,687
Ensembl chr15:64,364,304...64,387,687 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IEA UniProt GO_REF:0000043 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G PDS5A PDS5 cohesin associated factor A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:39,822,863...39,977,911
Ensembl chr 4:39,822,863...39,977,956 		JBrowse link
G PDS5B PDS5 cohesin associated factor B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:32,586,452...32,778,019
Ensembl chr13:32,586,452...32,778,019 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:64,092,652...64,144,420
Ensembl chr 2:64,092,652...64,144,420 		JBrowse link
G PIF1 PIF1 5'-to-3' DNA helicase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr15:64,815,632...64,827,062
Ensembl chr15:64,815,632...64,825,668 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:189,784,450...189,877,629
Ensembl chr 2:189,784,085...189,877,629 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15480418) UniProt
MGI
Ensembl		 PMID:15480418 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IEA
IBA
IGI		 (PMID:10446192) InterPro
TreeGrafter
GO_Central
UniProt		 PMID:10446192 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G POGZ pogo transposable element derived with ZNF domain involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:151,402,724...151,459,494
Ensembl chr 1:151,402,724...151,459,494 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in IDA
IMP		 (PMID:3335506)
(PMID:11470886)		 UniProt PMID:3335506 PMID:11470886 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLB DNA polymerase beta involved_in IEA
TAS		 (PMID:8168825) UniProt
InterPro
PINC		 PMID:8168825 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA
TAS		 (PMID:3146346) UniProt
PINC		 PMID:3146346 GO_REF:0000043 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:44,114,680...44,124,325
Ensembl chr 7:44,114,631...44,124,358 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr11:67,350,765...67,353,596
Ensembl chr11:67,350,772...67,356,972 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:28,346,633...28,357,527
Ensembl chr17:28,346,633...28,357,527 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in TAS (PMID:9405441) PINC PMID:9405441 NCBI chr14:49,643,555...49,688,214
Ensembl chr14:49,643,555...49,688,422 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr15:89,316,320...89,334,824
Ensembl chr15:89,305,198...89,334,861 		JBrowse link
G POLH DNA polymerase eta involved_in IEA
TAS		 (PMID:10871396) InterPro
UniProt
PINC		 PMID:10871396 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G POLI DNA polymerase iota involved_in TAS
IEA		 (PMID:10458907) PINC
InterPro
UniProt		 PMID:10458907 GO_REF:0000002 GO_REF:0000043 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,517...54,321,266 		JBrowse link
G POLK DNA polymerase kappa involved_in
acts_upstream_of_or_within		 TAS
ISO
IDA
IEA		 (PMID:10620008)
(PMID:12555660)
(PMID:28297716)		 UniProt
MGI
InterPro
Ensembl		 PMID:10620008 PMID:12555660 PMID:28297716 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
G POLL DNA polymerase lambda involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
G POLM DNA polymerase mu involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:44,072,062...44,082,530
Ensembl chr 7:44,072,062...44,082,530 		JBrowse link
G POLN DNA polymerase nu involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G POLQ DNA polymerase theta involved_in
acts_upstream_of_or_within		 TAS
ISO
IEA		 (PMID:10395804)
(PMID:12663541), (PMID:15542845)
(PMID:15542845)		 PINC
MGI
Ensembl
UniProt		 PMID:10395804 PMID:12663541 PMID:15542845 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PPP5C protein phosphatase 5 catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr19:46,347,087...46,390,975
Ensembl chr19:46,347,087...46,392,981 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:184,649,738...184,694,952
Ensembl chr 4:184,649,667...184,694,963 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PRMT6 protein arginine methyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717 		JBrowse link
G PSME4 proteasome activator subunit 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:53,864,069...53,970,993
Ensembl chr 2:53,864,069...53,970,993 		JBrowse link
G PTTG1 PTTG1 regulator of sister chromatid separation, securin involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:160,421,855...160,428,744
Ensembl chr 5:160,421,855...160,428,739 		JBrowse link
G PWWP3A PWWP domain containing 3A, DNA repair factor involved_in IMP
IBA
IEA		 (PMID:20347427) UniProt
GO_Central		 PMID:20347427 GO_REF:0000033 GO_REF:0000043 NCBI chr19:1,354,959...1,378,429
Ensembl chr19:1,354,711...1,378,431 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in TAS
IBA
IEA		 (PMID:9872989) PINC
GO_Central
UniProt		 PMID:9872989 GO_REF:0000033 GO_REF:0000043 NCBI chr 5:34,905,260...34,915,504
Ensembl chr 5:34,905,260...34,918,989 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in TAS
IBA
IEA		 (PMID:9660800) PINC
GO_Central
InterPro		 PMID:9660800 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:69,369,293...69,414,801
Ensembl chr 5:69,369,293...69,414,801 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA
NAS		 (PMID:10884424) UniProt PMID:10884424 GO_REF:0000043 NCBI chr 3:8,877,075...8,963,472
Ensembl chr 3:8,775,402...8,963,773 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr19:12,945,862...12,953,642
Ensembl chr19:12,945,855...12,953,642 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:107,283,279...107,332,194
Ensembl chr 9:107,283,137...107,332,192 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA
IDA		 (PMID:9705271) UniProt
InterPro		 PMID:9705271 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA
TAS		 (PMID:8358431) UniProt
InterPro
PINC		 PMID:8358431 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA
NAS
TAS		 (PMID:9396801) UniProt
PINC		 PMID:9396801 GO_REF:0000043 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RAD51B RAD51 paralog B involved_in TAS
IEA		 (PMID:9512535) PINC
UniProt		 PMID:9512535 GO_REF:0000043 NCBI chr14:67,819,779...68,683,096
Ensembl chr14:67,819,779...68,730,218 		JBrowse link
G RAD51C RAD51 paralog C involved_in IDA
TAS
IEA		 (PMID:19451272)
(PMID:9469824)		 UniProt
PINC
InterPro		 PMID:9469824 PMID:19451272 GO_REF:0000002 GO_REF:0000043 NCBI chr17:58,692,573...58,735,611
Ensembl chr17:58,692,573...58,735,611 		JBrowse link
G RAD51D RAD51 paralog D involved_in TAS
IEA		 (PMID:9570954) PINC
InterPro
UniProt		 PMID:9570954 GO_REF:0000002 GO_REF:0000043 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,221...35,121,522 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115 		JBrowse link
G RAD54L RAD54 like involved_in IEA
TAS		 (PMID:8805304) UniProt
PINC		 PMID:8805304 GO_REF:0000043 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA
IBA
TAS		 (PMID:8943031) InterPro
GO_Central
TreeGrafter
PINC		 PMID:8943031 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA
IBA		 UniProt
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr12:110,502,331...110,533,556
Ensembl chr12:110,501,655...110,533,556 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA
TAS		 (PMID:10764811) InterPro
PINC
UniProt		 PMID:10764811 GO_REF:0000002 GO_REF:0000043 NCBI chr18:22,914,139...23,026,486
Ensembl chr18:22,798,261...23,026,488 		JBrowse link
G RBX1 ring-box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:40,951,378...40,973,309
Ensembl chr22:40,951,347...40,973,309 		JBrowse link
G RECQL RecQ like helicase involved_in TAS
IEA		 (PMID:7961977) PINC
UniProt		 PMID:7961977 GO_REF:0000117 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in TAS
IEA		 (PMID:9878247) PINC
UniProt		 PMID:9878247 GO_REF:0000117 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IMP
IEA
TAS		 (PMID:22973052)
(PMID:9878247)		 UniProt
PINC		 PMID:9878247 PMID:22973052 GO_REF:0000043 GO_REF:0000117 NCBI chr17:75,626,854...75,667,154
Ensembl chr17:75,626,845...75,667,189 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IEA
IDA		 (PMID:21926160) UniProt
InterPro
CACAO		 PMID:21926160 GO_REF:0000002 GO_REF:0000043 NCBI chr 2:99,400,477...99,490,202
Ensembl chr 2:99,400,475...99,490,035 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884603) UniProt
MGI
Ensembl		 PMID:11884603 GO_REF:0000043 GO_REF:0000107 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715 		JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IDA (PMID:21602889) ARUK-UCL PMID:21602889 NCBI chr 9:133,406,058...133,418,172
Ensembl chr 9:133,406,059...133,418,096 		JBrowse link
G RFC1 replication factor C subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:39,287,456...39,366,362
Ensembl chr 4:39,287,456...39,366,375 		JBrowse link
G RFC2 replication factor C subunit 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:74,231,502...74,254,399
Ensembl chr 7:74,231,499...74,254,458 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr13:33,818,149...33,977,377
Ensembl chr13:33,818,069...33,966,558 		JBrowse link
G RFC4 replication factor C subunit 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:186,789,900...186,806,482
Ensembl chr 3:186,789,880...186,807,058 		JBrowse link
G RFC5 replication factor C subunit 5 involved_in NAS
IBA
IEA		 (PMID:8999859) UniProt
GO_Central
TreeGrafter		 PMID:8999859 GO_REF:0000033 GO_REF:0000118 NCBI chr12:118,016,703...118,041,448
Ensembl chr12:118,013,588...118,033,130 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:2,876,265...2,889,524
Ensembl chr12:2,876,258...2,889,524 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:11,345,459...11,351,760
Ensembl chr16:11,249,619...11,381,662 		JBrowse link
G RNF111 ring finger protein 111 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:58,987,663...59,097,419
Ensembl chr15:58,865,175...59,097,419 		JBrowse link
G RNF113A ring finger protein 113A involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:119,870,475...119,871,733
Ensembl chr  X:119,870,475...119,871,733 		JBrowse link
G RNF138 ring finger protein 138 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:32,091,874...32,131,561
Ensembl chr18:32,091,874...32,131,561 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF169 ring finger protein 169 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:74,748,849...74,842,413
Ensembl chr11:74,748,849...74,842,413 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G RPA1 replication protein A1 involved_in IDA
IMP
IEA		 (PMID:20545304)
(PMID:18469000)		 ComplexPortal
CACAO
InterPro
UniProt		 PMID:18469000 PMID:20545304 GO_REF:0000002 GO_REF:0000043 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPA2 replication protein A2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPA3 replication protein A3 involved_in IEA
IDA		 (PMID:20545304) InterPro
ComplexPortal
UniProt		 PMID:20545304 GO_REF:0000002 GO_REF:0000043 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607 		JBrowse link
G RPA4 replication protein A4 involved_in IEA
IDA		 (PMID:20545304) InterPro
UniProt
ComplexPortal		 PMID:20545304 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IEA
IMP		 (PMID:19059439) UniProt PMID:19059439 GO_REF:0000043 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IDA (PMID:11719458) ComplexPortal PMID:11719458 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA		 (PMID:12858174)
(PMID:11719458)		 UniProt
MGI
ComplexPortal
Ensembl		 PMID:11719458 PMID:12858174 GO_REF:0000043 GO_REF:0000107 NCBI chr 8:102,204,501...102,238,961
Ensembl chr 8:102,204,502...102,238,961 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253 		JBrowse link
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr20:63,657,810...63,698,698
Ensembl chr20:63,659,300...63,698,684 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA
TAS		 (PMID:10428817) UniProt
PINC		 PMID:10428817 GO_REF:0000043 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G SETMAR SET domain and mariner transposase fusion gene involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:4,303,369...4,317,265
Ensembl chr 3:4,303,332...4,317,265 		JBrowse link
G SETX senataxin involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986 		JBrowse link
G SFPQ splicing factor proline and glutamine rich involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:104,120,166...104,126,383
Ensembl chr10:104,122,058...104,126,385 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
G SHPRH SNF2 histone linker PHD RING helicase involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:145,857,838...145,964,358
Ensembl chr 6:145,864,245...145,964,423 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SIRT7 sirtuin 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:94,618,231...94,697,621
Ensembl chr 5:94,618,669...94,739,436 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:100,912,963...100,965,134
Ensembl chr10:100,912,963...100,965,134 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IEA
IMP		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) UniProt
InterPro		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,875...30,197,561 		JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit involved_in IEA
IMP		 (PMID:19595721), (PMID:19595722), (PMID:19596235), (PMID:19596236) UniProt
InterPro		 PMID:19595721 PMID:19595722 PMID:19596235 PMID:19596236 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr16:29,454,533...29,458,220
Ensembl chr16:29,454,533...29,458,219 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IMP
IEA		 (PMID:19595722) UniProt
InterPro		 PMID:19595722 GO_REF:0000002 GO_REF:0000043 NCBI chr16:3,581,181...3,611,606
Ensembl chr16:3,581,181...3,611,606 		JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in IDA (PMID:23911928) UniProt PMID:23911928 NCBI chr 4:143,513,702...143,557,486
Ensembl chr 4:143,513,702...143,557,486 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053 		JBrowse link
G SMC1A structural maintenance of chromosomes 1A involved_in IEA
TAS		 (PMID:11877377) UniProt PMID:11877377 GO_REF:0000043 NCBI chr  X:53,374,149...53,422,728
Ensembl chr  X:53,374,149...53,422,728 		JBrowse link
G SMC3 structural maintenance of chromosomes 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:110,567,695...110,606,048
Ensembl chr10:110,567,684...110,606,048 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:70,258,978...70,354,873
Ensembl chr 9:70,258,978...70,354,873 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:17,663,812...17,753,810
Ensembl chr 2:17,663,812...17,800,242 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in IEA UniProt GO_REF:0000043 NCBI chr16:18,804,860...18,926,408
Ensembl chr16:18,804,860...18,926,408 		JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:12718542 GO_REF:0000043 GO_REF:0000107 RGD:2317001 NCBI chr12:54,158,235...54,188,985
Ensembl chr12:54,121,277...54,189,008 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G SSRP1 structure specific recognition protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:57,325,988...57,335,892
Ensembl chr11:57,325,986...57,335,892 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:680,410...682,801
Ensembl chr16:680,224...682,870 		JBrowse link
G SUMO1 small ubiquitin like modifier 1 involved_in TAS (PMID:8812453) PINC PMID:8812453 NCBI chr 2:202,206,171...202,238,597
Ensembl chr 2:202,206,182...202,238,599 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr14:21,351,476...21,384,019
Ensembl chr14:21,351,476...21,384,019 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:128,275,356...128,288,989
Ensembl chr 9:128,275,379...128,316,123 		JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:11,374,666...11,376,169
Ensembl chr19:11,374,666...11,376,951 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:29,390,363...29,551,903
Ensembl chr17:29,390,363...29,551,903 		JBrowse link
G TAOK3 TAO kinase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:118,149,801...118,372,907
Ensembl chr12:118,149,801...118,372,907 		JBrowse link
G TDG thymine DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:103,965,872...103,988,874
Ensembl chr12:103,965,822...103,988,874 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA
IEA		 (PMID:17948061)
(PMID:21390131)		 UniProt
MGI
GO_Central
TreeGrafter
InterPro		 PMID:17948061 PMID:21390131 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr14:89,954,968...90,044,764
Ensembl chr14:89,954,939...90,044,764 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:24,649,979...24,666,899
Ensembl chr 6:24,649,979...24,666,930 		JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:30,831,544...30,913,008
Ensembl chr 8:30,831,544...30,913,008 		JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:51,671,252...51,704,323
Ensembl chr 3:51,662,693...51,704,323 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA UniProt GO_REF:0000043 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,020...54,115,657 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in IEA
ISS		 UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr15:89,575,469...89,628,023
Ensembl chr15:89,575,469...89,631,056 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000043 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:144,428,775...144,444,440
Ensembl chr 8:144,428,775...144,444,440 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:18,271,428...18,314,994
Ensembl chr17:18,271,428...18,315,007 		JBrowse link
G TOP3B DNA topoisomerase III beta involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:21,957,025...21,982,787
Ensembl chr22:21,957,025...21,982,813 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA
NAS		 (PMID:12773567), (PMID:22369660) UniProt PMID:12773567 PMID:22369660 GO_REF:0000043 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15364958) Ensembl
MGI
UniProt		 PMID:15364958 GO_REF:0000043 GO_REF:0000107 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough involved_in TAS (PMID:7797465) PINC PMID:7797465 NCBI chr22:38,290,691...38,398,915
Ensembl chr22:38,291,918...38,398,522 		JBrowse link
G TRAIP TRAF interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:49,828,601...49,856,564
Ensembl chr 3:49,828,601...49,856,574 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in TAS (PMID:10393201) PINC PMID:10393201 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G TREX2 three prime repair exonuclease 2 involved_in IEA
TAS		 (PMID:10391904) UniProt
PINC		 PMID:10391904 GO_REF:0000043 NCBI chr  X:153,444,473...153,446,056
Ensembl chr  X:153,444,473...153,470,587 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IDA (PMID:17178852) UniProt PMID:17178852 NCBI chr19:58,544,064...58,550,715
Ensembl chr19:58,544,064...58,550,722 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:229,763,837...229,923,186
Ensembl chr 2:229,763,837...229,923,239 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831 		JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:20,286,227...20,305,951
Ensembl chr14:20,256,558...20,305,960 		JBrowse link
G TTF2 transcription termination factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:117,060,326...117,107,453
Ensembl chr 1:117,060,326...117,107,453 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IGI
IEA
IBA		 (PMID:1717990) UniProt
TreeGrafter
GO_Central		 PMID:1717990 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr  X:119,574,563...119,584,423
Ensembl chr  X:119,474,802...119,591,083 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IEA
IBA
IGI		 (PMID:1717990) UniProt
TreeGrafter
GO_Central		 PMID:1717990 GO_REF:0000033 GO_REF:0000043 GO_REF:0000118 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,184...134,392,108 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:102,794,383...102,868,895
Ensembl chr 4:102,794,383...102,868,896 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IEA UniProt GO_REF:0000043 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2T ubiquitin conjugating enzyme E2 T involved_in IEA
IMP		 (PMID:16916645) UniProt PMID:16916645 GO_REF:0000043 NCBI chr 1:202,331,657...202,341,936
Ensembl chr 1:202,331,544...202,341,984 		JBrowse link
G UBE2U ubiquitin conjugating enzyme E2 U involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:64,203,623...64,267,368
Ensembl chr 1:64,203,623...64,267,368 		JBrowse link
G UBE2W ubiquitin conjugating enzyme E2 W involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:73,780,096...73,878,862
Ensembl chr 8:73,780,097...73,878,910 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:156,031,247...156,053,798
Ensembl chr 1:156,035,299...156,053,798 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:102,252,273...102,412,700
Ensembl chr 8:102,252,273...102,412,759 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:193,012,254...193,060,076
Ensembl chr 1:193,012,250...193,060,080 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:96,521,806...96,555,276
Ensembl chr 6:96,521,595...96,555,276 		JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
G UNG uracil DNA glycosylase involved_in IEA UniProt GO_REF:0000043 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,597...109,126,725 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IDA (PMID:16488880) HGNC-UCL PMID:16488880 NCBI chr19:18,831,959...18,868,230
Ensembl chr19:18,831,959...18,868,230 		JBrowse link
G USP1 ubiquitin specific peptidase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:62,436,395...62,451,804
Ensembl chr 1:62,436,297...62,451,804 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:84,700,000...84,779,922
Ensembl chr16:84,699,986...84,779,922 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:113,797,875...113,875,572
Ensembl chr11:113,797,874...113,875,572 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IMP (PMID:17980597) UniProt PMID:17980597 NCBI chr15:63,504,593...63,594,633
Ensembl chr15:63,504,511...63,594,640 		JBrowse link
G USP45 ubiquitin specific peptidase 45 acts_upstream_of_or_within IMP (PMID:25538220) MGI PMID:25538220 NCBI chr 6:99,432,325...99,517,846
Ensembl chr 6:99,432,325...99,521,728 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IEA UniProt GO_REF:0000043 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:55,484,616...55,489,848
Ensembl chr  X:55,484,616...55,489,848 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328 		JBrowse link
G UVRAG UV radiation resistance associated involved_in TAS
IMP
IEA		 (PMID:9169138)
(PMID:22542840)		 PINC
UniProt
Ensembl		 PMID:9169138 PMID:22542840 GO_REF:0000043 GO_REF:0000107 NCBI chr11:75,815,210...76,144,232
Ensembl chr11:75,815,210...76,144,232 		JBrowse link
G UVSSA UV stimulated scaffold protein A involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:1,342,011...1,395,989
Ensembl chr 4:1,345,691...1,395,989 		JBrowse link
G VCP valosin containing protein involved_in IEA
NAS		 (PMID:16140914) UniProt PMID:16140914 GO_REF:0000043 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:66,628,487...66,667,231
Ensembl chr 8:66,628,487...66,667,231 		JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:54,938,949...55,027,099
Ensembl chr14:54,938,949...55,027,105 		JBrowse link
G WDR48 WD repeat domain 48 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:39,052,016...39,096,664
Ensembl chr 3:39,052,013...39,096,671 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502 		JBrowse link
G WRN WRN RecQ like helicase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 6:2,765,393...2,786,952
Ensembl chr 6:2,765,393...2,786,952 		JBrowse link
G XAB2 XPA binding protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr19:7,619,525...7,629,545
Ensembl chr19:7,619,525...7,629,545 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP
IDA		 (PMID:11950998), (PMID:9661901)
(PMID:1601884)		 UniProt
MGI
CAFA		 PMID:1601884 PMID:9661901 PMID:11950998 GO_REF:0000043 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:12555660)
(PMID:1522891)		 Ensembl
MGI
UniProt
PINC		 PMID:1522891 PMID:12555660 GO_REF:0000043 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19633665) UniProt
MGI
Ensembl		 PMID:19633665 GO_REF:0000043 GO_REF:0000107 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in TAS
IEA
IGI		 (PMID:9628903)
(PMID:10422536)		 PINC
UniProt
BHF-UCL		 PMID:9628903 PMID:10422536 GO_REF:0000043 NCBI chr 7:152,644,776...152,676,141
Ensembl chr 7:152,644,776...152,676,193 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IEA
IGI
TAS		 (PMID:10422536)
(PMID:9660962)		 InterPro
UniProt
BHF-UCL
PINC		 PMID:9660962 PMID:10422536 GO_REF:0000002 GO_REF:0000043 NCBI chr14:103,697,617...103,715,451
Ensembl chr14:103,697,609...103,715,504 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA UniProt GO_REF:0000043 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IMP
IEA		 (PMID:24657165) UniProt PMID:24657165 GO_REF:0000043 NCBI chr14:64,503,716...64,533,693
Ensembl chr14:64,503,712...64,533,690 		JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:67,728,892...67,816,590
Ensembl chr14:67,727,374...67,816,590 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:112,539,339...112,636,909
Ensembl chr 4:112,539,333...112,636,995 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21746928)
(PMID:15980864), (PMID:21746928)		 Ensembl
MGI		 PMID:15980864 PMID:21746928 GO_REF:0000107 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180 		JBrowse link
G ZNF668 zinc finger protein 668 involved_in IMP (PMID:34313816) UniProt PMID:34313816 NCBI chr16:31,060,847...31,074,240
Ensembl chr16:31,060,843...31,074,240 		JBrowse link
G ZRANB3 zinc finger RANBP2-type containing 3 involved_in IEA
IBA
IDA		 (PMID:22759634) UniProt
GO_Central		 PMID:22759634 GO_REF:0000033 GO_REF:0000043 NCBI chr 2:135,196,969...135,531,218
Ensembl chr 2:135,136,916...135,531,218 		JBrowse link
G ZSWIM7 zinc finger SWIM-type containing 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:15,976,560...15,999,704
Ensembl chr17:15,976,560...15,999,717 		JBrowse link
DNA repair-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO PMID:19282473 UniProt PMID:19282473 RGD:8553580 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,125...6,419,414 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in IDA (PMID:21211722), (PMID:29905837) UniProt PMID:21211722 PMID:29905837 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone involved_in IDA (PMID:29478807) UniProt PMID:29478807 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IMP (PMID:19261746) UniProt PMID:19261746 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IMP (PMID:19202061), (PMID:19261746) UniProt PMID:19202061 PMID:19261746 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IMP (PMID:19818714) UniProt PMID:19818714 NCBI chr 3:122,564,338...122,575,203
Ensembl chr 3:122,564,338...122,575,203 		JBrowse link
G HDAC3 histone deacetylase 3 involved_in IDA (PMID:25301942) UniProt PMID:25301942 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IMP (PMID:26721387) GO_Central PMID:26721387 NCBI chr19:4,472,297...4,502,207
Ensembl chr19:4,472,297...4,502,208 		JBrowse link
G HPF1 histone PARylation factor 1 involved_in IDA (PMID:32939087) UniProt PMID:32939087 NCBI chr 4:169,729,470...169,757,944
Ensembl chr 4:169,729,470...169,757,944 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IMP
IDA		 (PMID:10966108)
(PMID:25301942)		 UniProt PMID:10966108 PMID:25301942 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within IDA (PMID:24217620) MGI PMID:24217620 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IDA (PMID:32939087) UniProt PMID:32939087 NCBI chr14:20,343,635...20,357,904
Ensembl chr14:20,343,615...20,357,904 		JBrowse link
G PHF1 PHD finger protein 1 involved_in IDA (PMID:23142980) UniProt PMID:23142980 NCBI chr 6:33,410,412...33,416,439
Ensembl chr 6:33,410,399...33,416,453 		JBrowse link
G RNF168 ring finger protein 168 involved_in IMP
IDA		 (PMID:23760478)
(PMID:19203578), (PMID:19500350), (PMID:22980979)		 UniProt PMID:19203578 PMID:19500350 PMID:22980979 PMID:23760478 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF8 ring finger protein 8 involved_in IDA (PMID:18001824), (PMID:18001825), (PMID:22980979) UniProt PMID:18001824 PMID:18001825 PMID:22980979 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G SIRT1 sirtuin 1 involved_in IDA (PMID:20100829) UniProt PMID:20100829 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SIRT7 sirtuin 7 involved_in IDA
IEA
ISS		 (PMID:27436229) UniProt
Ensembl		 PMID:27436229 GO_REF:0000024 GO_REF:0000107 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323 		JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in IMP (PMID:22884692) UniProt PMID:22884692 NCBI chr 2:229,763,837...229,923,186
Ensembl chr 2:229,763,837...229,923,239 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 involved_in IMP (PMID:22884692) UniProt PMID:22884692 NCBI chr 8:102,252,273...102,412,700
Ensembl chr 8:102,252,273...102,412,759 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IMP (PMID:19202061) UniProt PMID:19202061 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
G USP3 ubiquitin specific peptidase 3 involved_in IDA (PMID:17980597) UniProt PMID:17980597 NCBI chr15:63,504,593...63,594,633
Ensembl chr15:63,504,511...63,594,640 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in IMP (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:55,484,616...55,489,848
Ensembl chr  X:55,484,616...55,489,848 		JBrowse link
DNA replication proofreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12429860) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:12429860 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLG DNA polymerase gamma, catalytic subunit involved_in IDA
IMP		 (PMID:37202477)
(PMID:11897778)		 UniProt PMID:11897778 PMID:37202477 NCBI chr15:89,316,320...89,334,824
Ensembl chr15:89,305,198...89,334,861 		JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP003419.1 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr11:67,351,572...67,373,584 JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in IMP (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,566,460...10,568,979
Ensembl chr19:10,566,460...10,569,059 		JBrowse link
G ERVK-6 endogenous retrovirus group K member 6, envelope involved_in IEA UniProt GO_REF:0000117
G ERVK-7 endogenous retrovirus group K member 7 involved_in IEA UniProt GO_REF:0000117
G HROB homologous recombination factor with OB-fold involved_in IMP (PMID:31467087) UniProt PMID:31467087 NCBI chr17:44,141,930...44,162,476
Ensembl chr17:44,141,906...44,162,476 		JBrowse link
G NYNRIN NYN domain and retroviral integrase containing involved_in IEA UniProt GO_REF:0000117 NCBI chr14:24,399,003...24,419,283
Ensembl chr14:24,399,003...24,419,283 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IMP
IEA		 (PMID:11470886) UniProt PMID:11470886 GO_REF:0000117 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IDA
IEA
IMP		 (PMID:24191025), (PMID:3335506)
(PMID:1730053)		 UniProt PMID:1730053 PMID:3335506 PMID:24191025 GO_REF:0000117 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in NAS (PMID:7910606) UniProt PMID:7910606 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G POLD4 DNA polymerase delta 4, accessory subunit involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr11:67,350,765...67,353,596
Ensembl chr11:67,350,772...67,356,972 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IMP
IEA		 (PMID:1730053) UniProt PMID:1730053 GO_REF:0000117 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLH DNA polymerase eta involved_in IDA (PMID:17563354) UniProt PMID:17563354 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G POLN DNA polymerase nu involved_in IEA UniProt GO_REF:0000117 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA UniProt GO_REF:0000117 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715 		JBrowse link
G RFC3 replication factor C subunit 3 involved_in TAS (PMID:9488738) UniProt PMID:9488738 NCBI chr13:33,818,149...33,977,377
Ensembl chr13:33,818,069...33,966,558 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in NAS (PMID:10716435) ComplexPortal PMID:10716435 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932 		JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in NAS (PMID:10716435) ComplexPortal PMID:10716435 NCBI chr 8:102,204,501...102,238,961
Ensembl chr 8:102,204,502...102,238,961 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G UBXN8 UBX domain protein 8 involved_in IEA UniProt GO_REF:0000117 NCBI chr 8:30,729,135...30,767,006
Ensembl chr 8:30,729,131...30,767,006 		JBrowse link
G WRN WRN RecQ like helicase involved_in IDA (PMID:17563354) UniProt PMID:17563354 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G WRNIP1 WRN helicase interacting protein 1 involved_in IDA
IBA
IEA		 (PMID:15670210) UniProt
GO_Central
TreeGrafter		 PMID:15670210 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:2,765,393...2,786,952
Ensembl chr 6:2,765,393...2,786,952 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in IMP (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23993650) Ensembl
MGI		 PMID:23993650 GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IMP (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr 4:83,459,517...83,485,100
Ensembl chr 4:83,459,517...83,523,348 		JBrowse link
G ACTR5 actin related protein 5 involved_in IMP (PMID:19014934) UniProt PMID:19014934 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,125...6,419,414 		JBrowse link
G APLF aprataxin and PNKP like factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:21211721)
(PMID:17396150)		 Ensembl
MGI
GO_Central
UniProt
InterPro		 PMID:17396150 PMID:21211721 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G ATM ATM serine/threonine kinase involved_in TAS
IBA
IDA		 (PMID:26240375) Reactome
GO_Central
UniProt		 PMID:26240375 GO_REF:0000033 Reactome:R-HSA-5693606 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IDA (PMID:11390642) UniProt PMID:11390642 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IMP
IBA		 (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProt
GO_Central		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000033 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA
IBA
IMP		 (PMID:19261748) UniProt
TreeGrafter
GO_Central		 PMID:19261748 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in TAS
IMP
IDA
IEA		 (PMID:17525340), (PMID:17643121), (PMID:19261748)
(PMID:22186889)		 Reactome
UniProt
CACAO
Ensembl		 PMID:17525340 PMID:17643121 PMID:19261748 PMID:22186889 GO_REF:0000107 Reactome:R-HSA-5693606 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:9398843)
(PMID:17476307)
(PMID:16845393)		 Ensembl
MGI
UniProt		 PMID:9398843 PMID:16845393 PMID:17476307 GO_REF:0000107 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA
IBA
IMP		 (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt
GO_Central		 PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000033 GO_REF:0000104 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in NAS (PMID:11301010) UniProt PMID:11301010 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G CDCA5 cell division cycle associated 5 involved_in IMP
IBA		 (PMID:17349791) UniProt
GO_Central		 PMID:17349791 GO_REF:0000033 NCBI chr11:65,061,093...65,084,040
Ensembl chr11:65,066,300...65,084,164 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IMP
TAS		 (PMID:18317453) UniProt
Reactome		 PMID:18317453 Reactome:R-HSA-5693606 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CIB1 calcium and integrin binding 1 involved_in TAS (PMID:9372844) PINC PMID:9372844 NCBI chr15:90,229,975...90,265,759
Ensembl chr15:90,229,975...90,234,047 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in IDA (PMID:22325354) UniProt PMID:22325354 NCBI chr20:472,498...543,790
Ensembl chr20:472,498...543,835 		JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 involved_in IDA (PMID:22325354) UniProt PMID:22325354 NCBI chr16:58,157,907...58,198,106
Ensembl chr16:58,157,907...58,198,106 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12615897) Ensembl
MGI		 PMID:12615897 GO_REF:0000107 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432 		JBrowse link
G DDX1 DEAD-box helicase 1 involved_in IDA (PMID:18710941) UniProt PMID:18710941 NCBI chr 2:15,591,868...15,631,101
Ensembl chr 2:15,591,178...15,634,346 		JBrowse link
G DTX3L deltex E3 ubiquitin ligase 3L involved_in IMP (PMID:23230272) UniProt PMID:23230272 NCBI chr 3:122,564,338...122,575,203
Ensembl chr 3:122,564,338...122,575,203 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IDA
IBA		 (PMID:18413719) ComplexPortal
GO_Central		 PMID:18413719 GO_REF:0000033 NCBI chr17:50,373,229...50,381,483
Ensembl chr17:50,373,220...50,381,483 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IDA
IBA		 (PMID:17289582) ComplexPortal
GO_Central		 PMID:17289582 GO_REF:0000033 NCBI chr16:1,772,810...1,781,702
Ensembl chr16:1,772,810...1,781,708 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:11707424)
(PMID:17912366)
(PMID:15199134)		 Ensembl
MGI
UniProt		 PMID:11707424 PMID:15199134 PMID:17912366 GO_REF:0000107 GO_REF:0000117 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22614755) Ensembl
MGI		 PMID:22614755 GO_REF:0000107 NCBI chr 8:27,771,974...27,819,660
Ensembl chr 8:27,771,949...27,812,640 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IDA (PMID:26807646) UniProt PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,498...69,244,020 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IMP (PMID:19234442) UniProt PMID:19234442 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IMP
TAS		 (PMID:19234442) UniProt
Reactome		 PMID:19234442 Reactome:R-HSA-5693606 NCBI chr 1:27,970,344...28,088,610
Ensembl chr 1:27,970,344...28,088,637 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in TAS (PMID:8131753) PINC PMID:8131753 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238 		JBrowse link
G GGN gametogenetin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23451117) InterPro
MGI		 PMID:23451117 GO_REF:0000002 NCBI chr19:38,384,267...38,388,384
Ensembl chr19:38,384,267...38,388,082 		JBrowse link
G H2AX H2A.X variant histone involved_in NAS (PMID:19234442) UniProt PMID:19234442 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G HPF1 histone PARylation factor 1 involved_in IDA (PMID:32028527) UniProt PMID:32028527 NCBI chr 4:169,729,470...169,757,944
Ensembl chr 4:169,729,470...169,757,944 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IMP (PMID:20687897) UniProt PMID:20687897 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in TAS
IDA		 (PMID:26438602) Reactome
UniProt		 PMID:26438602 Reactome:R-HSA-5693606 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G LIG3 DNA ligase 3 involved_in IDA
IEA
IBA		 (PMID:19589734) BHF-UCL
TreeGrafter
GO_Central		 PMID:19589734 GO_REF:0000033 GO_REF:0000118 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IDA
ISO
ISS
IEA		 (PMID:19589734), (PMID:9242410)
(PMID:15175260)
(PMID:12531011), (PMID:15175260)
(PMID:17554302)		 BHF-UCL
MGI
UniProt
Ensembl		 PMID:9242410 PMID:12531011 PMID:15175260 PMID:17554302 PMID:19589734 GO_REF:0000024 GO_REF:0000107 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IGI (PMID:15988022) UniProt PMID:15988022 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G MARF1 meiosis regulator and mRNA stability factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23090997) Ensembl
MGI		 PMID:23090997 GO_REF:0000107 NCBI chr16:15,594,387...15,643,154
Ensembl chr16:15,594,387...15,643,154 		JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,656,468...44,677,087
Ensembl chr17:44,656,404...44,690,308 		JBrowse link
G MPND MPN domain containing involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:4,343,562...4,360,078
Ensembl chr19:4,343,527...4,360,086 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA
TAS		 (PMID:17291760)
(PMID:14657032), (PMID:26240375)
(PMID:10612394)		 Ensembl
MGI
UniProt
InterPro
PINC		 PMID:10612394 PMID:14657032 PMID:17291760 PMID:26240375 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17912366) Ensembl
MGI		 PMID:17912366 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MTA1 metastasis associated 1 involved_in IEA
IBA
IMP		 (PMID:19805145) Ensembl
TreeGrafter
GO_Central
UniProt		 PMID:19805145 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:105,419,827...105,470,729
Ensembl chr14:105,419,820...105,470,729 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IDA
IEA		 (PMID:17289582), (PMID:18413719) ComplexPortal
InterPro		 PMID:17289582 PMID:18413719 GO_REF:0000002 NCBI chr11:65,859,674...65,867,653
Ensembl chr11:65,857,126...65,867,653 		JBrowse link
G NBN nibrin involved_in IEA
IDA		 (PMID:9590181) InterPro
UniProt		 PMID:9590181 GO_REF:0000002 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,355...219,160,869 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in TAS Reactome Reactome:R-HSA-5693606 NCBI chr 4:1,871,393...1,982,192
Ensembl chr 4:1,871,393...1,982,207 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA
IDA		 (PMID:23230272)
(PMID:21270334)
(PMID:24906880), (PMID:27568560), (PMID:28190768), (PMID:32028527)		 UniProt
MGI
GO_Central
TreeGrafter		 PMID:21270334 PMID:23230272 PMID:24906880 PMID:27568560 PMID:28190768 More... GO_REF:0000033 GO_REF:0000118 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:20,343,635...20,357,904
Ensembl chr14:20,343,615...20,357,904 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within
involved_in		 IDA
IBA
IEA
IMP		 (PMID:21270334)
(PMID:21211721)		 MGI
GO_Central
TreeGrafter
Ensembl		 PMID:21211721 PMID:21270334 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:51,942,363...51,948,867
Ensembl chr 3:51,942,345...51,948,867 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IMP (PMID:23230272) UniProt PMID:23230272 NCBI chr 3:122,527,924...122,564,784
Ensembl chr 3:122,527,924...122,564,577 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in TAS Reactome Reactome:R-HSA-5693606 NCBI chr19:4,007,736...4,039,386
Ensembl chr19:4,007,736...4,039,386 		JBrowse link
G PLK1 polo like kinase 1 involved_in IDA (PMID:22325354) UniProt PMID:22325354 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367 		JBrowse link
G POLN DNA polymerase nu involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G POLQ DNA polymerase theta involved_in IDA (PMID:22135286) UniProt PMID:22135286 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PPP5C protein phosphatase 5 catalytic subunit involved_in TAS Reactome Reactome:R-HSA-5693606 NCBI chr19:46,347,087...46,390,975
Ensembl chr19:46,347,087...46,392,981 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:12604618)
(PMID:11751629)
(PMID:18710952)		 Ensembl
MGI
GO_Central
UniProt
BHF-UCL		 PMID:11751629 PMID:12604618 PMID:18710952 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in TAS (PMID:8812457) PINC PMID:8812457 NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21743440) Ensembl
MGI		 PMID:21743440 GO_REF:0000107 NCBI chr20:1,226,044...1,255,876
Ensembl chr20:1,226,044...1,296,421 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in TAS
IBA
IEA
IMP		 (PMID:10802669)
(PMID:9590181)		 PINC
GO_Central
TreeGrafter
InterPro
UniProt		 PMID:9590181 PMID:10802669 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in TAS
IEA		 (PMID:7774919) PINC
UniProt		 PMID:7774919 GO_REF:0000117 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
G RAD54L RAD54 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15175260) Ensembl
MGI		 PMID:15175260 GO_REF:0000107 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:24,172,080...24,180,923
Ensembl chr14:24,171,853...24,180,257 		JBrowse link
G RNF168 ring finger protein 168 involved_in IEA
IBA
IDA		 (PMID:19203578), (PMID:19203579), (PMID:22980979) InterPro
GO_Central
UniProt		 PMID:19203578 PMID:19203579 PMID:22980979 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF169 ring finger protein 169 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:74,748,849...74,842,413
Ensembl chr11:74,748,849...74,842,413 		JBrowse link
G RNF8 ring finger protein 8 involved_in IDA
IBA
IEA		 (PMID:18001824), (PMID:18001825), (PMID:22980979) UniProt
GO_Central
InterPro		 PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G SETX senataxin involved_in IDA (PMID:17562789) UniProt PMID:17562789 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986 		JBrowse link
G SIRT6 sirtuin 6 involved_in IDA (PMID:21680843), (PMID:27568560) UniProt PMID:21680843 PMID:27568560 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:17,663,812...17,753,810
Ensembl chr 2:17,663,812...17,800,242 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in IDA (PMID:12023295) UniProt PMID:12023295 NCBI chr14:89,954,968...90,044,764
Ensembl chr14:89,954,939...90,044,764 		JBrowse link
G TDP2 tyrosyl-DNA phosphodiesterase 2 involved_in IDA
IEA
IBA
IMP		 (PMID:19794497)
(PMID:21030584)		 UniProt
TreeGrafter
GO_Central		 PMID:19794497 PMID:21030584 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:24,649,979...24,666,899
Ensembl chr 6:24,649,979...24,666,930 		JBrowse link
G TENT4A terminal nucleotidyltransferase 4A involved_in NAS (PMID:10066793) UniProt PMID:10066793 NCBI chr 5:6,713,432...6,757,044
Ensembl chr 5:6,713,432...6,757,044 		JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in IMP
IBA
IEA		 (PMID:25749521) BHF-UCL
GO_Central
TreeGrafter		 PMID:25749521 GO_REF:0000033 GO_REF:0000118 NCBI chr11:57,299,642...57,324,952
Ensembl chr11:57,299,638...57,324,952 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17912366) Ensembl
MGI		 PMID:17912366 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TRIP13 thyroid hormone receptor interactor 13 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:17696610) UniProt
MGI
Ensembl		 PMID:17696610 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:892,884...919,348
Ensembl chr 5:892,884...919,357 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IMP
IBA
IEA		 (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt
GO_Central
InterPro		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
G VCP valosin containing protein involved_in IDA (PMID:10855792), (PMID:22120668) UniProt PMID:10855792 PMID:22120668 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G WRN WRN RecQ like helicase involved_in IMP (PMID:21639834) UniProt PMID:21639834 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA		 (PMID:11751629), (PMID:9875844)
(PMID:9242410)		 InterPro
MGI
UniProt		 PMID:9242410 PMID:9875844 PMID:11751629 GO_REF:0000002 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in
acts_upstream_of_or_within		 IMP
ISO
IEA
TAS		 (PMID:19581589)
(PMID:12531011)
(PMID:8073286)		 BHF-UCL
MGI
UniProt
Ensembl
PINC		 PMID:8073286 PMID:12531011 PMID:19581589 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (PMID:11751629) MGI PMID:11751629 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:112,539,339...112,636,909
Ensembl chr 4:112,539,333...112,636,995 		JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:26490168) Ensembl
MGI
GO_Central		 PMID:26490168 GO_REF:0000033 GO_REF:0000107 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G BRME1 break repair meiotic recombinase recruitment factor 1 involved_in IEA
ISS		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000024 NCBI chr19:13,882,348...13,906,117
Ensembl chr19:13,882,348...13,906,452 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:38,509,147...38,570,183
Ensembl chr22:38,518,948...38,570,204 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,370...10,101,932 		JBrowse link
G HSF2BP heat shock transcription factor 2 binding protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr21:43,444,972...43,659,488
Ensembl chr21:43,529,186...43,659,488 		JBrowse link
G MAJIN membrane anchored junction protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30718482) Ensembl
MGI		 PMID:30718482 GO_REF:0000107 NCBI chr11:64,938,230...64,972,108
Ensembl chr11:64,937,517...64,972,108 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:66,870,771...66,926,382
Ensembl chr 8:66,870,749...66,922,048 		JBrowse link
G PRDM9 PR/SET domain 9 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:23,507,155...23,528,093
Ensembl chr 5:23,443,586...23,528,093 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27760146) Ensembl
MGI		 PMID:27760146 GO_REF:0000107 NCBI chr20:57,329,803...57,343,993
Ensembl chr20:57,329,803...57,343,994 		JBrowse link
G TERB1 telomere repeat binding bouquet formation protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30718482) Ensembl
MGI		 PMID:30718482 GO_REF:0000107 NCBI chr16:66,754,640...66,802,025
Ensembl chr16:66,754,640...66,801,620 		JBrowse link
G TERB2 telomere repeat binding bouquet formation protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30718482) Ensembl
MGI		 PMID:30718482 GO_REF:0000107 NCBI chr15:44,956,687...44,979,229
Ensembl chr15:44,956,687...44,979,229 		JBrowse link
double-strand break repair via alternative nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELQ helicase, POLQ like involved_in IDA (PMID:34937945) UniProt PMID:34937945 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G LIG3 DNA ligase 3 involved_in IGI (PMID:24837021) BHF-UCL PMID:24837021 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G NBN nibrin involved_in IEA
IDA		 (PMID:28216226) Ensembl
UniProt		 PMID:28216226 GO_REF:0000107 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G PLK1 polo like kinase 1 involved_in IDA (PMID:37440612), (PMID:37674080) UniProt PMID:37440612 PMID:37674080 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA
IBA
IDA		 (PMID:25643323), (PMID:25775267), (PMID:27311885), (PMID:27591252), (PMID:31562312), (PMID:32234782), (PMID:33577776), (PMID:34179826), (PMID:36455556), (PMID:37440612), (PMID:37674080) Ensembl
GO_Central
TreeGrafter
UniProt		 PMID:25643323 PMID:25775267 PMID:27311885 PMID:27591252 PMID:31562312 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in TAS (PMID:18710952) BHF-UCL PMID:18710952 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IDA (PMID:37440612) UniProt PMID:37440612 NCBI chr12:2,876,265...2,889,524
Ensembl chr12:2,876,258...2,889,524 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:37674080) UniProt PMID:37674080 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
double-strand break repair via break-induced replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC45 cell division cycle 45 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:19,479,466...19,520,612
Ensembl chr22:19,479,457...19,520,612 		JBrowse link
G CDC7 cell division cycle 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:91,500,851...91,525,764
Ensembl chr 1:91,500,851...91,525,764 		JBrowse link
G GINS2 GINS complex subunit 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:85,676,198...85,688,954
Ensembl chr16:85,676,198...85,690,073 		JBrowse link
G GINS4 GINS complex subunit 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:41,529,261...41,545,030
Ensembl chr 8:41,529,218...41,545,030 		JBrowse link
G MCM2 minichromosome maintenance complex component 2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:127,598,411...127,622,436
Ensembl chr 3:127,598,410...127,622,436 		JBrowse link
G MCM3 minichromosome maintenance complex component 3 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:52,264,015...52,284,742
Ensembl chr 6:52,264,014...52,284,881 		JBrowse link
G MCM4 minichromosome maintenance complex component 4 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:47,960,941...47,978,160
Ensembl chr 8:47,960,185...47,978,160 		JBrowse link
G MCM5 minichromosome maintenance complex component 5 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr22:35,400,140...35,455,031
Ensembl chr22:35,400,134...35,425,431 		JBrowse link
G MCM6 minichromosome maintenance complex component 6 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:135,839,626...135,876,443
Ensembl chr 2:135,839,626...135,876,443 		JBrowse link
G MCM7 minichromosome maintenance complex component 7 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:100,092,728...100,101,397
Ensembl chr 7:100,092,233...100,101,940 		JBrowse link
G MCMDC2 minichromosome maintenance domain containing 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:66,870,771...66,926,382
Ensembl chr 8:66,870,749...66,922,048 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IEA
IBA		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr11:65,859,674...65,867,653
Ensembl chr11:65,857,126...65,867,653 		JBrowse link
double-strand break repair via classical nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G LIG4 DNA ligase 4 involved_in IMP (PMID:24837021) BHF-UCL PMID:24837021 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G RNF168 ring finger protein 168 involved_in IDA (PMID:27153538) UniProt PMID:27153538 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:31135337) UniProt PMID:31135337 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IDA (PMID:27153538) UniProt PMID:27153538 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IDA (PMID:22542840) UniProt PMID:22542840 NCBI chr11:75,815,210...76,144,232
Ensembl chr11:75,815,210...76,144,232 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IDA (PMID:24095731) BHF-UCL PMID:24095731 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:4,043,303...4,066,899
Ensembl chr19:4,043,303...4,066,899 		JBrowse link
double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE1 ankyrin repeat and LEM domain containing 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr19:17,281,901...17,287,646
Ensembl chr19:17,281,645...17,287,646 		JBrowse link
G AP5S1 adaptor related protein complex 5 subunit sigma 1 involved_in IEA
IMP		 (PMID:20613862) InterPro
UniProt		 PMID:20613862 GO_REF:0000002 NCBI chr20:3,820,547...3,828,838
Ensembl chr20:3,820,524...3,828,838 		JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 involved_in IMP (PMID:20613862) UniProt PMID:20613862 NCBI chr 7:4,775,623...4,794,397
Ensembl chr 7:4,775,615...4,794,397 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
IDA
ISO		 (PMID:10802669)
(PMID:19061978)		 Ensembl
UniProt
MGI		 PMID:10802669 PMID:19061978 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G AUNIP aurora kinase A and ninein interacting protein involved_in IDA (PMID:29042561) UniProt PMID:29042561 NCBI chr 1:25,831,906...25,859,457
Ensembl chr 1:25,831,913...25,859,458 		JBrowse link
G BLM BLM RecQ like helicase involved_in IDA
IBA
IEA
NAS		 (PMID:23543748)
(PMID:11309417)		 ComplexPortal
GO_Central
TreeGrafter
UniProt		 PMID:11309417 PMID:23543748 GO_REF:0000033 GO_REF:0000118 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IDA
IEA
IBA		 (PMID:17349954), (PMID:28398198) ComplexPortal
TreeGrafter
GO_Central		 PMID:17349954 PMID:28398198 GO_REF:0000033 GO_REF:0000118 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA
IDA		 (PMID:21719596)
(PMID:15485900)
(PMID:20729832), (PMID:28398198)		 UniProt
MGI
GO_Central
TreeGrafter
ComplexPortal
InterPro
Ensembl		 PMID:15485900 PMID:20729832 PMID:21719596 PMID:28398198 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in IMP (PMID:25593309) UniProt PMID:25593309 NCBI chr12:6,570,082...6,607,379
Ensembl chr12:6,570,082...6,614,524 		JBrowse link
G DMC1 DNA meiotic recombinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:38,509,147...38,570,183
Ensembl chr22:38,518,948...38,570,204 		JBrowse link
G EID3 EP300 interacting inhibitor of differentiation 3 involved_in NAS (PMID:16810316) ComplexPortal PMID:16810316 NCBI chr12:104,303,739...104,305,205
Ensembl chr12:104,303,739...104,305,205 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IDA (PMID:27153538) UniProt PMID:27153538 NCBI chr10:32,267,751...32,378,769
Ensembl chr10:32,267,751...32,378,798 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IMP
IEA
IBA		 (PMID:14728600) UniProt
TreeGrafter
GO_Central		 PMID:14728600 GO_REF:0000033 GO_REF:0000118 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in IMP (PMID:26833090) UniProt PMID:26833090 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995 		JBrowse link
G EXD2 exonuclease 3'-5' domain containing 2 involved_in IDA (PMID:26807646) UniProt PMID:26807646 NCBI chr14:69,191,498...69,244,018
Ensembl chr14:69,191,498...69,244,020 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IMP (PMID:20603015), (PMID:20603016) UniProt PMID:20603015 PMID:20603016 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in ISS
IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594 		JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in TAS Reactome Reactome:R-HSA-5693538 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238 		JBrowse link
G GEN1 GEN1 Holliday junction 5' flap endonuclease involved_in IMP (PMID:23166748) UniProt PMID:23166748 NCBI chr 2:17,753,278...17,788,946
Ensembl chr 2:17,753,858...17,788,946 		JBrowse link
G H2AX H2A.X variant histone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11934988) Ensembl
MGI		 PMID:11934988 GO_REF:0000107 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G HELQ helicase, POLQ like involved_in IMP (PMID:19995904) UniProt PMID:19995904 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 involved_in IDA (PMID:35597237) UniProt PMID:35597237 NCBI chr  X:136,497,229...136,512,346
Ensembl chr  X:136,497,079...136,512,346 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:655,939...657,100
Ensembl chr 6:655,939...657,100 		JBrowse link
G INIP INTS3 and NABP interacting protein involved_in IDA (PMID:19683501) ComplexPortal PMID:19683501 NCBI chr 9:112,683,926...112,718,117
Ensembl chr 9:112,683,926...112,718,149 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IMP (PMID:18026119) UniProt PMID:18026119 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INTS3 integrator complex subunit 3 involved_in IDA (PMID:19683501) ComplexPortal PMID:19683501 NCBI chr 1:153,728,050...153,774,808
Ensembl chr 1:153,728,050...153,774,808 		JBrowse link
G KASH5 KASH domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24062341) Ensembl
MGI		 PMID:24062341 GO_REF:0000107 NCBI chr19:49,388,249...49,417,990
Ensembl chr19:49,388,219...49,417,990 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IDA
IBA
IEA		 (PMID:27153538) UniProt
GO_Central
Ensembl		 PMID:27153538 GO_REF:0000033 GO_REF:0000107 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within IMP (PMID:24550317) MGI PMID:24550317 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519 		JBrowse link
G LIG3 DNA ligase 3 involved_in TAS Reactome Reactome:R-HSA-5693538 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G LOC130134321 SLX1A-like involved_in IMP
IBA		 (PMID:19595721) UniProt
GO_Central		 PMID:19595721 GO_REF:0000033
G MBTD1 mbt domain containing 1 involved_in IDA (PMID:27153538), (PMID:32209463) UniProt PMID:27153538 PMID:32209463 NCBI chr17:51,177,425...51,260,958
Ensembl chr17:51,177,425...51,260,163 		JBrowse link
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IMP
IEA
IBA
NAS		 (PMID:23401855)
(PMID:22771115)		 UniProt
TreeGrafter
GO_Central
ComplexPortal
Ensembl		 PMID:22771115 PMID:23401855 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:5,950,652...5,998,977
Ensembl chr20:5,950,652...5,998,977 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IMP
IBA
IEA
NAS
IDA		 (PMID:23401855)
(PMID:22771115)		 UniProt
GO_Central
TreeGrafter
ComplexPortal
Ensembl		 PMID:22771115 PMID:23401855 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162 		JBrowse link
G MEIOB meiosis specific with OB-fold involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:1,833,986...1,872,164
Ensembl chr16:1,833,986...1,872,178 		JBrowse link
G MMS22L MMS22 like, DNA repair protein involved_in IEA
IBA
IDA
IMP		 (PMID:27797818)
(PMID:21055983), (PMID:21055984), (PMID:21055985)		 InterPro
TreeGrafter
GO_Central
UniProt		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27797818 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:97,142,161...97,284,035
Ensembl chr 6:97,142,161...97,283,217 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IDA (PMID:20332121) UniProt PMID:20332121 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IEA
IBA
IDA		 (PMID:15741314), (PMID:24316220), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:29670289), (PMID:30612738), (PMID:30787182), (PMID:31353207), (PMID:36563124), (PMID:38128537) Ensembl
TreeGrafter
GO_Central
UniProt		 PMID:15741314 PMID:24316220 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G NABP1 nucleic acid binding protein 1 involved_in IMP
IBA
IDA		 (PMID:19605351)
(PMID:19683501)		 UniProt
GO_Central
ComplexPortal		 PMID:19605351 PMID:19683501 GO_REF:0000033 NCBI chr 2:191,678,136...191,686,943
Ensembl chr 2:191,678,068...191,741,097 		JBrowse link
G NABP2 nucleic acid binding protein 2 involved_in IDA
IBA
IMP		 (PMID:19683501)
(PMID:19605351)		 ComplexPortal
GO_Central
UniProt		 PMID:19605351 PMID:19683501 GO_REF:0000033 NCBI chr12:56,222,015...56,229,854
Ensembl chr12:56,222,015...56,229,854 		JBrowse link
G NBN nibrin involved_in IBA
IDA
IEA		 (PMID:22464731), (PMID:23115235), (PMID:27814491), (PMID:27889449), (PMID:28867292), (PMID:30787182), (PMID:30952868) GO_Central
UniProt
TreeGrafter		 PMID:22464731 PMID:23115235 PMID:27814491 PMID:27889449 PMID:28867292 More... GO_REF:0000033 GO_REF:0000118 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NSMCE1 NSE1 homolog, SMC5-SMC6 complex component involved_in NAS
IBA
IEA		 (PMID:16810316) ComplexPortal
GO_Central
TreeGrafter		 PMID:16810316 GO_REF:0000033 GO_REF:0000118 NCBI chr16:27,224,994...27,268,772
Ensembl chr16:27,224,994...27,268,772 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase involved_in IEA
IBA
NAS
IMP		 (PMID:16810316) InterPro
GO_Central
ComplexPortal
UniProt		 PMID:16810316 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:125,091,860...125,367,120
Ensembl chr 8:125,091,679...125,367,120 		JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in NAS (PMID:16810316) ComplexPortal PMID:16810316 NCBI chr15:29,264,989...29,269,822
Ensembl chr15:29,264,989...29,269,822 		JBrowse link
G NSMCE4A NSE4 homolog A, SMC5-SMC6 complex component involved_in NAS (PMID:16810316) ComplexPortal PMID:16810316 NCBI chr10:121,957,091...121,975,217
Ensembl chr10:121,957,091...121,975,217 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IMP
IBA		 (PMID:26323318) ParkinsonsUK-UCL
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 1:205,712,822...205,750,182
Ensembl chr 1:205,712,822...205,750,182 		JBrowse link
G PALB2 partner and localizer of BRCA2 involved_in IDA
IEA
IBA
IMP		 (PMID:19369211), (PMID:19423707), (PMID:28398198)
(PMID:26323318)		 UniProt
TreeGrafter
GO_Central
ParkinsonsUK-UCL
InterPro		 PMID:19369211 PMID:19423707 PMID:26323318 PMID:28398198 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr16:23,603,165...23,641,310
Ensembl chr16:23,603,160...23,641,321 		JBrowse link
G POGZ pogo transposable element derived with ZNF domain acts_upstream_of_or_within_positive_effect IMP (PMID:26721387) UniProt PMID:26721387 NCBI chr 1:151,402,724...151,459,494
Ensembl chr 1:151,402,724...151,459,494 		JBrowse link
G POLL DNA polymerase lambda involved_in IMP (PMID:20693240) UniProt PMID:20693240 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
G POLN DNA polymerase nu involved_in IMP (PMID:19995904) UniProt PMID:19995904 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:30,075,994...30,085,376
Ensembl chr16:30,075,978...30,085,376 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IMP (PMID:22909820) UniProt PMID:22909820 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711701) Ensembl
MGI		 PMID:22711701 GO_REF:0000107 NCBI chr20:1,226,044...1,255,876
Ensembl chr20:1,226,044...1,296,421 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IDA (PMID:27889449), (PMID:28867292) UniProt PMID:27889449 PMID:28867292 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349 		JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 ISO
IDA
IEA
IMP
TAS		 (PMID:17996710), (PMID:17996711), (PMID:18417535), (PMID:26811421), (PMID:27239033), (PMID:32640219)
(PMID:22778135), (PMID:23509288), (PMID:26681308)
(PMID:12427746)
(PMID:16428451)		 RGD
UniProt
Ensembl
InterPro
MGI		 PMID:12427746 PMID:14755242 PMID:16428451 PMID:17996710 PMID:17996711 More... GO_REF:0000002 GO_REF:0000107 RGD:9831188 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IMP
IEA
IBA
NAS		 (PMID:26323318)
(PMID:9396801)		 ParkinsonsUK-UCL
TreeGrafter
GO_Central
UniProt		 PMID:9396801 PMID:26323318 GO_REF:0000033 GO_REF:0000118 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RAD51B RAD51 paralog B involved_in IEA
IBA
IMP		 (PMID:23149936) InterPro
GO_Central
UniProt		 PMID:23149936 GO_REF:0000002 GO_REF:0000033 NCBI chr14:67,819,779...68,683,096
Ensembl chr14:67,819,779...68,730,218 		JBrowse link
G RAD51C RAD51 paralog C involved_in IMP (PMID:23149936) UniProt PMID:23149936 NCBI chr17:58,692,573...58,735,611
Ensembl chr17:58,692,573...58,735,611 		JBrowse link
G RAD51D RAD51 paralog D involved_in IMP
IBA		 (PMID:23149936) UniProt
GO_Central		 PMID:23149936 GO_REF:0000033 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,221...35,121,522 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12379650) Ensembl
MGI
GO_Central
TreeGrafter
InterPro		 PMID:12379650 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
G RAD54B RAD54 homolog B acts_upstream_of_or_within
involved_in		 IDA
IBA
IEA		 (PMID:16428451) MGI
GO_Central
Ensembl		 PMID:16428451 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115 		JBrowse link
G RAD54L RAD54 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16428451)
(PMID:19061978)		 Ensembl
MGI		 PMID:16428451 PMID:19061978 GO_REF:0000107 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IMP
IDA		 (PMID:26721387)
(PMID:27814491), (PMID:27889449), (PMID:30787182)		 UniProt PMID:26721387 PMID:27814491 PMID:27889449 PMID:30787182 NCBI chr18:22,914,139...23,026,486
Ensembl chr18:22,798,261...23,026,488 		JBrowse link
G REC8 REC8 meiotic recombination protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711701) Ensembl
MGI		 PMID:22711701 GO_REF:0000107 NCBI chr14:24,172,080...24,180,923
Ensembl chr14:24,171,853...24,180,257 		JBrowse link
G RECQL RecQ like helicase involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:21,468,910...21,501,635
Ensembl chr12:21,468,910...21,501,669 		JBrowse link
G RECQL4 RecQ like helicase 4 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:144,511,288...144,517,833
Ensembl chr 8:144,511,288...144,517,845 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr17:75,626,854...75,667,154
Ensembl chr17:75,626,845...75,667,189 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IDA
IMP		 (PMID:26474068), (PMID:28575657), (PMID:28575658)
(PMID:28691929)		 UniProt PMID:26474068 PMID:28575657 PMID:28575658 PMID:28691929 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RMI1 RecQ mediated genome instability 1 involved_in IDA
IBA		 (PMID:23543748) ComplexPortal
GO_Central		 PMID:23543748 GO_REF:0000033 NCBI chr 9:83,980,359...84,004,074
Ensembl chr 9:83,980,798...84,004,074 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IDA (PMID:23543748) ComplexPortal PMID:23543748 NCBI chr16:11,345,459...11,351,760
Ensembl chr16:11,249,619...11,381,662 		JBrowse link
G RNF138 ring finger protein 138 involved_in IMP
IEA
IBA		 (PMID:26502055), (PMID:26502057) UniProt
TreeGrafter
GO_Central		 PMID:26502055 PMID:26502057 GO_REF:0000033 GO_REF:0000118 NCBI chr18:32,091,874...32,131,561
Ensembl chr18:32,091,874...32,131,561 		JBrowse link
G RNF169 ring finger protein 169 involved_in IDA (PMID:22492721) UniProt PMID:22492721 NCBI chr11:74,748,849...74,842,413
Ensembl chr11:74,748,849...74,842,413 		JBrowse link
G RPA1 replication protein A1 involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
NAS		 (PMID:17765923)
(PMID:15470499)		 UniProt
MGI
GO_Central
ComplexPortal		 PMID:15470499 PMID:17765923 GO_REF:0000033 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPA2 replication protein A2 involved_in IMP
IBA
IEA
NAS		 (PMID:17765923) UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:17765923 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPA3 replication protein A3 involved_in IMP
IEA
IBA
NAS		 (PMID:17765923) UniProt
TreeGrafter
GO_Central
ComplexPortal		 PMID:17765923 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607 		JBrowse link
G RPA4 replication protein A4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA (PMID:28834754), (PMID:29670289) UniProt PMID:28834754 PMID:29670289 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893 		JBrowse link
G SEM1 SEM1 26S proteasome subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15359272) Ensembl
TreeGrafter
MGI
GO_Central		 PMID:15359272 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:96,481,626...96,709,846
Ensembl chr 7:96,481,626...96,709,880 		JBrowse link
G SFPQ splicing factor proline and glutamine rich acts_upstream_of_or_within IMP (PMID:20813759) MGI PMID:20813759 NCBI chr 1:35,176,380...35,193,145
Ensembl chr 1:35,176,378...35,193,446 		JBrowse link
G SFR1 SWI5 dependent homologous recombination repair protein 1 involved_in IMP
IBA
IEA		 (PMID:21252223) UniProt
GO_Central
InterPro		 PMID:21252223 GO_REF:0000002 GO_REF:0000033 NCBI chr10:104,120,166...104,126,383
Ensembl chr10:104,122,058...104,126,385 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in NAS (PMID:16810316) ComplexPortal PMID:16810316 NCBI chr 5:94,618,231...94,697,621
Ensembl chr 5:94,618,669...94,739,436 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in NAS (PMID:16810316) ComplexPortal PMID:16810316 NCBI chr10:100,912,963...100,965,134
Ensembl chr10:100,912,963...100,965,134 		JBrowse link
G SLX1A SLX1 homolog A, structure-specific endonuclease subunit involved_in IMP
IBA
IEA		 (PMID:19595721) UniProt
GO_Central
TreeGrafter		 PMID:19595721 GO_REF:0000033 GO_REF:0000118 NCBI chr16:30,193,843...30,197,566
Ensembl chr16:30,193,875...30,197,561 		JBrowse link
G SLX1B SLX1 homolog B, structure-specific endonuclease subunit involved_in IMP
IEA
IBA		 (PMID:19595721) UniProt
TreeGrafter
GO_Central		 PMID:19595721 GO_REF:0000033 GO_REF:0000118 NCBI chr16:29,454,533...29,458,220
Ensembl chr16:29,454,533...29,458,219 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IMP (PMID:19595721), (PMID:19596235) UniProt PMID:19595721 PMID:19596235 NCBI chr16:3,581,181...3,611,606
Ensembl chr16:3,581,181...3,611,606 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in IEA
IBA
NAS
IMP		 (PMID:16810316) InterPro
GO_Central
ComplexPortal
UniProt		 PMID:16810316 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:70,258,978...70,354,873
Ensembl chr 9:70,258,978...70,354,873 		JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in NAS
IEA
IBA		 (PMID:16810316) ComplexPortal
TreeGrafter
GO_Central		 PMID:16810316 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:17,663,812...17,753,810
Ensembl chr 2:17,663,812...17,800,242 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IMP
IBA
IEA		 (PMID:23509288), (PMID:27967308), (PMID:34697795) UniProt
GO_Central
TreeGrafter		 PMID:23509288 PMID:27967308 PMID:34697795 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in IMP
IBA		 (PMID:21252223) UniProt
GO_Central		 PMID:21252223 GO_REF:0000033 NCBI chr 9:128,275,356...128,288,989
Ensembl chr 9:128,275,379...128,316,123 		JBrowse link
G SWSAP1 SWIM-type zinc finger 7 associated protein 1 involved_in IMP
IBA		 (PMID:21965664) UniProt
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr19:11,374,666...11,376,169
Ensembl chr19:11,374,666...11,376,951 		JBrowse link
G TONSL tonsoku like, DNA repair protein involved_in IMP
IBA
IEA
IDA		 (PMID:21055983), (PMID:21055984), (PMID:21055985), (PMID:30773278)
(PMID:27338793), (PMID:27797818)		 UniProt
GO_Central
TreeGrafter		 PMID:21055983 PMID:21055984 PMID:21055985 PMID:27338793 PMID:27797818 More... GO_REF:0000033 GO_REF:0000118 NCBI chr 8:144,428,775...144,444,440
Ensembl chr 8:144,428,775...144,444,440 		JBrowse link
G TOP3A DNA topoisomerase III alpha involved_in IDA (PMID:23543748) ComplexPortal PMID:23543748 NCBI chr17:18,271,428...18,314,994
Ensembl chr17:18,271,428...18,315,007 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IDA (PMID:26811421), (PMID:35597237) UniProt PMID:26811421 PMID:35597237 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IMP (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 involved_in TAS (PMID:33939809) BHF-UCL PMID:33939809 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154 		JBrowse link
G WDR48 WD repeat domain 48 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24001775) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:24001775 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:39,052,016...39,096,664
Ensembl chr 3:39,052,013...39,096,671 		JBrowse link
G WRN WRN RecQ like helicase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:31,033,810...31,176,138
Ensembl chr 8:31,033,788...31,176,138 		JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:16777961)
(PMID:23149936)		 Ensembl
MGI
TreeGrafter
GO_Central
UniProt
InterPro		 PMID:16777961 PMID:23149936 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:152,644,776...152,676,141
Ensembl chr 7:152,644,776...152,676,193 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IMP (PMID:23149936) UniProt PMID:23149936 NCBI chr14:103,697,617...103,715,451
Ensembl chr14:103,697,609...103,715,504 		JBrowse link
G YY1 YY1 transcription factor involved_in IMP (PMID:18026119) UniProt PMID:18026119 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
G ZFYVE26 zinc finger FYVE-type containing 26 involved_in IEA
IMP		 (PMID:20613862) InterPro
UniProt		 PMID:20613862 GO_REF:0000002 NCBI chr14:67,728,892...67,816,590
Ensembl chr14:67,727,374...67,816,590 		JBrowse link
G ZMYND8 zinc finger MYND-type containing 8 involved_in IMP (PMID:25593309) UniProt PMID:25593309 NCBI chr20:47,209,214...47,356,699
Ensembl chr20:47,209,214...47,356,889 		JBrowse link
G ZSWIM7 zinc finger SWIM-type containing 7 involved_in IMP
IBA		 (PMID:21965664) UniProt
GO_Central		 PMID:21965664 GO_REF:0000033 NCBI chr17:15,976,560...15,999,704
Ensembl chr17:15,976,560...15,999,717 		JBrowse link
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IMP (PMID:23689425) UniProt PMID:23689425 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G ATM ATM serine/threonine kinase involved_in TAS Reactome Reactome:R-HSA-5693571 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATP23 ATP23 metallopeptidase and ATP synthase assembly factor homolog involved_in TAS (PMID:10219089) UniProt PMID:10219089 NCBI chr12:57,941,567...57,959,148
Ensembl chr12:57,906,039...57,959,148 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in IDA
IBA
IEA		 (PMID:24610814) UniProt
GO_Central
Ensembl		 PMID:24610814 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:135,092,303...135,172,469
Ensembl chr 7:135,092,363...135,170,795 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:113,834,725...113,854,394
Ensembl chr10:113,834,725...113,854,383 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,904,619...113,914,086 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in TAS
IEA
IBA		 Reactome
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-5693571 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432 		JBrowse link
G DNTT DNA nucleotidylexotransferase involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:96,304,434...96,338,564
Ensembl chr10:96,304,409...96,338,564 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G HMGB2 high mobility group box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432 		JBrowse link
G IFFO1 intermediate filament family orphan 1 involved_in IMP (PMID:31548606) UniProt PMID:31548606 NCBI chr12:6,538,961...6,556,042
Ensembl chr12:6,538,961...6,556,073 		JBrowse link
G KDM2A lysine demethylase 2A involved_in IMP (PMID:21187428) UniProt PMID:21187428 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082 		JBrowse link
G LIG1 DNA ligase 1 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G LIG3 DNA ligase 3 acts_upstream_of_or_within ISO (PMID:21655080) MGI PMID:21655080 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G LIG4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IDA
ISO
IEA
IBA
IMP
TAS
IGI		 (PMID:12517771), (PMID:17290226)
(PMID:10823907)
(PMID:16777961)
(PMID:9809069)
(PMID:23275564)		 UniProt
MGI
TreeGrafter
GO_Central
Reactome
Ensembl
BHF-UCL		 PMID:9809069 PMID:10823907 PMID:12517771 PMID:16777961 PMID:17290226 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 Reactome:R-GGA-353423 Reactome:R-HSA-5693571 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15084308) Ensembl
MGI		 PMID:15084308 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IDA
IEA
IBA
TAS		 (PMID:9651580) CACAO
TreeGrafter
GO_Central
PINC		 PMID:9651580 GO_REF:0000033 GO_REF:0000118 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G NHEJ1 non-homologous end joining factor 1 involved_in IMP
IBA
IEA
IDA		 (PMID:16439204), (PMID:16439205)
(PMID:17717001), (PMID:18158905), (PMID:18644470), (PMID:19056826), (PMID:20558749), (PMID:27437582), (PMID:28500754), (PMID:30250067)		 UniProt
GO_Central
Ensembl		 PMID:16439204 PMID:16439205 PMID:17717001 PMID:18158905 PMID:18644470 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:219,069,357...219,160,815
Ensembl chr 2:219,069,355...219,160,869 		JBrowse link
G NSMCE2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase NOT|involved_in IMP (PMID:16810316) UniProt PMID:16810316 NCBI chr 8:125,091,860...125,367,120
Ensembl chr 8:125,091,679...125,367,120 		JBrowse link
G PAXX PAXX non-homologous end joining factor involved_in IEA
IBA
IMP
IDA		 (PMID:25574025), (PMID:25670504), (PMID:25941166)
(PMID:30250067)		 InterPro
GO_Central
Ensembl
UniProt		 PMID:25574025 PMID:25670504 PMID:25941166 PMID:30250067 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:136,992,422...136,993,976
Ensembl chr 9:136,992,422...136,993,984 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IDA (PMID:15385968), (PMID:28453785) UniProt PMID:15385968 PMID:28453785 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit involved_in IMP (PMID:11470886) UniProt PMID:11470886 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLB DNA polymerase beta involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLL DNA polymerase lambda involved_in TAS
IBA
IEA
IDA
IMP		 (PMID:30250067)
(PMID:19806195)		 Reactome
GO_Central
TreeGrafter
UniProt		 PMID:19806195 PMID:30250067 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-5693571 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
G POLM DNA polymerase mu involved_in TAS
IBA		 Reactome
GO_Central		 GO_REF:0000033 Reactome:R-HSA-5693571 NCBI chr 7:44,072,062...44,082,530
Ensembl chr 7:44,072,062...44,082,530 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 TAS
ISO
NAS
IEA		 (PMID:23836881)
(PMID:10207111)		 Reactome
MGI
ComplexPortal
InterPro
Ensembl		 PMID:10207111 PMID:23836881 GO_REF:0000002 GO_REF:0000107 Reactome:R-HSA-5693571 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in IMP (PMID:18263876) UniProt PMID:18263876 NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585 		JBrowse link
G PSMD14 proteasome 26S subunit, non-ATPase 14 involved_in IMP (PMID:22909820) UniProt PMID:22909820 NCBI chr 2:161,308,425...161,411,717
Ensembl chr 2:161,308,425...161,411,717 		JBrowse link
G RNF168 ring finger protein 168 involved_in IDA (PMID:27153538) UniProt PMID:27153538 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF8 ring finger protein 8 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G SETMAR SET domain and mariner transposase fusion gene involved_in IDA
IEA
IBA
IMP		 (PMID:16332963)
(PMID:18263876), (PMID:21187428), (PMID:24573677)		 UniProt
TreeGrafter
GO_Central		 PMID:16332963 PMID:18263876 PMID:21187428 PMID:24573677 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:4,303,369...4,317,265
Ensembl chr 3:4,303,332...4,317,265 		JBrowse link
G SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 involved_in IMP (PMID:26089390) CACAO PMID:26089390 NCBI chr 2:216,412,484...216,483,053
Ensembl chr 2:216,412,383...216,483,053 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 NOT|involved_in IMP (PMID:16810316) UniProt PMID:16810316 NCBI chr 9:70,258,978...70,354,873
Ensembl chr 9:70,258,978...70,354,873 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IEA
IDA		 (PMID:23333306), (PMID:23760478), (PMID:27153538), (PMID:28241136), (PMID:31135337) Ensembl
UniProt		 PMID:23333306 PMID:23760478 PMID:27153538 PMID:28241136 PMID:31135337 GO_REF:0000107 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA
IDA
NAS		 (PMID:9809069)
(PMID:17713479)
(PMID:12517771), (PMID:15385968), (PMID:17290226), (PMID:25597996), (PMID:25934149), (PMID:26774286), (PMID:27437582), (PMID:28500754)
(PMID:16439205)
(PMID:25742519)		 UniProt
MGI
GO_Central		 PMID:9809069 PMID:12517771 PMID:15385968 PMID:16439205 PMID:17290226 More... GO_REF:0000033 GO_REF:0000117 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA
IBA
NAS
IDA
IMP
TAS		 (PMID:10207111), (PMID:9362500)
(PMID:26359349)
(PMID:20383123)
(PMID:15824061)		 InterPro
GO_Central
TreeGrafter
ComplexPortal
UniProt
BHF-UCL		 PMID:9362500 PMID:10207111 PMID:15824061 PMID:20383123 PMID:26359349 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
NAS
IMP		 (PMID:10508516), (PMID:15824061)
(PMID:11751629)
(PMID:10207111), (PMID:9362500)
(PMID:20383123), (PMID:26359349)		 PINC
MGI
GO_Central
TreeGrafter
ComplexPortal
UniProt
InterPro		 PMID:9362500 PMID:10207111 PMID:10508516 PMID:11751629 PMID:15824061 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD52 RAD52 homolog, DNA repair protein involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
double-strand break repair via single-strand annealing, removal of nonhomologous ends term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
double-strand break repair via synthesis-dependent strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G FANCM FA complementation group M involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:45,135,930...45,200,890
Ensembl chr14:45,135,930...45,200,890 		JBrowse link
G HELQ helicase, POLQ like involved_in IDA (PMID:34937945) UniProt PMID:34937945 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115 		JBrowse link
G RAD54L RAD54 like involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:103,697,617...103,715,451
Ensembl chr14:103,697,609...103,715,504 		JBrowse link
error-free postreplication DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UBE2V1 ubiquitin conjugating enzyme E2 V1 acts_upstream_of_or_within ISO (PMID:11406273) MGI PMID:11406273 NCBI chr20:50,081,124...50,115,957
Ensembl chr20:50,081,124...50,115,959 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11406273) Ensembl
MGI		 PMID:11406273 GO_REF:0000107 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IDA (PMID:24191025) UniProt PMID:24191025 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in IDA
IBA		 (PMID:24191025) UniProt
GO_Central		 PMID:24191025 GO_REF:0000033 NCBI chr17:28,346,633...28,357,527
Ensembl chr17:28,346,633...28,357,527 		JBrowse link
G POLH DNA polymerase eta involved_in TAS Reactome Reactome:R-HSA-110320 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G RCHY1 ring finger and CHY zinc finger domain containing 1 involved_in TAS Reactome Reactome:R-HSA-110320 NCBI chr 4:75,479,033...75,514,715
Ensembl chr 4:75,479,033...75,514,764 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:99,400,477...99,490,202
Ensembl chr 2:99,400,475...99,490,035 		JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IDA (PMID:24449906) ComplexPortal PMID:24449906 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G POLD2 DNA polymerase delta 2, accessory subunit involved_in IDA (PMID:24449906) ComplexPortal PMID:24449906 NCBI chr 7:44,114,680...44,124,325
Ensembl chr 7:44,114,631...44,124,358 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IDA (PMID:24449906) ComplexPortal PMID:24449906 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G POLE2 DNA polymerase epsilon 2, accessory subunit involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:49,643,555...49,688,214
Ensembl chr14:49,643,555...49,688,422 		JBrowse link
G POLH DNA polymerase eta involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G POLI DNA polymerase iota involved_in TAS Reactome Reactome:R-HSA-5656121 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,517...54,321,266 		JBrowse link
G POLK DNA polymerase kappa involved_in IDA
IEA
IBA		 (PMID:28297716) UniProt
TreeGrafter
GO_Central		 PMID:28297716 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
G POLQ DNA polymerase theta involved_in IDA (PMID:30655289) UniProt PMID:30655289 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IDA
IEA		 (PMID:24682820), (PMID:25746449), (PMID:28534480) UniProt
InterPro		 PMID:24682820 PMID:25746449 PMID:28534480 GO_REF:0000002 NCBI chr 4:184,649,738...184,694,952
Ensembl chr 4:184,649,667...184,694,963 		JBrowse link
G REV1 REV1 DNA directed polymerase involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA		 (PMID:11485998)
(PMID:11711549)		 UniProt
MGI
GO_Central
TreeGrafter
InterPro
Ensembl		 PMID:11485998 PMID:11711549 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 Reactome:R-HSA-110312 NCBI chr 2:99,400,477...99,490,202
Ensembl chr 2:99,400,475...99,490,035 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IDA
IBA
IEA		 (PMID:24449906) ComplexPortal
GO_Central
TreeGrafter		 PMID:24449906 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715 		JBrowse link
global genome nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF111 ring finger protein 111 involved_in TAS Reactome Reactome:R-HSA-5696399 NCBI chr15:58,987,663...59,097,419
Ensembl chr15:58,865,175...59,097,419 		JBrowse link
G USP45 ubiquitin specific peptidase 45 involved_in TAS Reactome Reactome:R-HSA-5696399 NCBI chr 6:99,432,325...99,517,846
Ensembl chr 6:99,432,325...99,521,728 		JBrowse link
interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATR ATR serine/threonine kinase involved_in TAS Reactome Reactome:R-HSA-6783310 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G CENPS centromere protein S involved_in IDA (PMID:20347429) ComplexPortal PMID:20347429 NCBI chr 1:10,430,433...10,442,808
Ensembl chr 1:10,430,433...10,442,808 		JBrowse link
G CENPS-CORT CENPS-CORT readthrough involved_in IDA (PMID:20347429) ComplexPortal PMID:20347429 NCBI chr 1:10,430,433...10,452,153
Ensembl chr 1:10,430,102...10,452,153 		JBrowse link
G CENPX centromere protein X involved_in IDA (PMID:20347429) ComplexPortal PMID:20347429 NCBI chr17:82,018,703...82,022,878
Ensembl chr17:82,018,702...82,024,107 		JBrowse link
G DCLRE1A DNA cross-link repair 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:113,834,725...113,854,394
Ensembl chr10:113,834,725...113,854,383 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IMP
IBA		 (PMID:20479256) BHF-UCL
GO_Central		 PMID:20479256 GO_REF:0000033 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,904,619...113,914,086 		JBrowse link
G DCLRE1C DNA cross-link repair 1C involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:14,897,359...14,954,432
Ensembl chr10:14,897,359...14,954,432 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23637614) Ensembl
MGI		 PMID:23637614 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC6L2 ERCC excision repair 6 like 2 involved_in IMP (PMID:24507776) UniProt PMID:24507776 NCBI chr 9:95,875,691...96,041,092
Ensembl chr 9:95,871,264...96,121,154 		JBrowse link
G EXO5 exonuclease 5 involved_in IMP
IBA		 (PMID:23095756) UniProt
GO_Central		 PMID:23095756 GO_REF:0000033 NCBI chr 1:40,508,767...40,516,038
Ensembl chr 1:40,508,741...40,516,038 		JBrowse link
G FAAP100 FA core complex associated protein 100 involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr17:81,539,891...81,553,133
Ensembl chr17:81,539,885...81,553,961 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IMP
NAS		 (PMID:22266823), (PMID:22396592), (PMID:22705371)
(PMID:19965384)		 UniProt
ComplexPortal		 PMID:19965384 PMID:22266823 PMID:22396592 PMID:22705371 NCBI chr 1:2,184,477...2,212,720
Ensembl chr 1:2,184,461...2,212,720 		JBrowse link
G FAAP24 FA core complex associated protein 24 involved_in IEA
IDA		 (PMID:20347429) InterPro
ComplexPortal		 PMID:20347429 GO_REF:0000002 NCBI chr19:32,972,242...32,978,229
Ensembl chr19:32,972,209...32,978,229 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IDA
IBA
IEA		 (PMID:25430771) UniProt
GO_Central
TreeGrafter
InterPro		 PMID:25430771 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108 		JBrowse link
G FANCA FA complementation group A involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr16:89,737,549...89,816,647
Ensembl chr16:89,726,683...89,816,977 		JBrowse link
G FANCB FA complementation group B involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G FANCC FA complementation group C involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr 9:95,099,054...95,317,709
Ensembl chr 9:95,099,054...95,426,796 		JBrowse link
G FANCD2 FA complementation group D2 involved_in NAS
IBA		 (PMID:19965384) ComplexPortal
GO_Central		 PMID:19965384 GO_REF:0000033 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,370...10,101,932 		JBrowse link
G FANCE FA complementation group E involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr 6:35,452,338...35,467,102
Ensembl chr 6:35,452,338...35,467,104 		JBrowse link
G FANCF FA complementation group F involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr11:22,622,533...22,625,823
Ensembl chr11:22,622,533...22,625,823 		JBrowse link
G FANCG FA complementation group G involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr 9:35,073,839...35,079,942
Ensembl chr 9:35,073,835...35,080,004 		JBrowse link
G FANCI FA complementation group I involved_in NAS (PMID:19965384) ComplexPortal PMID:19965384 NCBI chr15:89,243,979...89,317,259
Ensembl chr15:89,243,945...89,317,261 		JBrowse link
G FANCL FA complementation group L involved_in IEA
NAS		 (PMID:19965384) InterPro
ComplexPortal		 PMID:19965384 GO_REF:0000002 NCBI chr 2:58,159,243...58,241,380
Ensembl chr 2:58,159,243...58,241,410 		JBrowse link
G FANCM FA complementation group M involved_in IDA
IBA		 (PMID:20347429) ComplexPortal
GO_Central		 PMID:20347429 GO_REF:0000033 NCBI chr14:45,135,930...45,200,890
Ensembl chr14:45,135,930...45,200,890 		JBrowse link
G FIRRM FIGNL1 interacting regulator of recombination and mitosis involved_in IMP (PMID:37256941) UniProt PMID:37256941 NCBI chr 1:169,783,837...169,854,080
Ensembl chr 1:169,662,007...169,854,080 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IDA (PMID:33321094), (PMID:36608669), (PMID:37519246), (PMID:37950866) UniProt PMID:33321094 PMID:36608669 PMID:37519246 PMID:37950866 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IMP (PMID:31467087) UniProt PMID:31467087 NCBI chr17:44,141,930...44,162,476
Ensembl chr17:44,141,906...44,162,476 		JBrowse link
G NEIL3 nei like DNA glycosylase 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:177,309,874...177,371,268
Ensembl chr 4:177,309,874...177,362,936 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IMP
IBA		 (PMID:26323318) ParkinsonsUK-UCL
GO_Central		 PMID:26323318 GO_REF:0000033 NCBI chr 1:205,712,822...205,750,182
Ensembl chr 1:205,712,822...205,750,182 		JBrowse link
G POLN DNA polymerase nu involved_in TAS
IMP		 (PMID:19908865), (PMID:19995904) Reactome
UniProt		 PMID:19908865 PMID:19995904 Reactome:R-HSA-6783310 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G RAD51 RAD51 recombinase involved_in IMP (PMID:26253028) UniProt PMID:26253028 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IMP
IBA
IEA		 (PMID:26323318) ParkinsonsUK-UCL
GO_Central
TreeGrafter		 PMID:26323318 GO_REF:0000033 GO_REF:0000118 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RAD51D RAD51 paralog D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15781618) Ensembl
MGI		 PMID:15781618 GO_REF:0000107 NCBI chr17:35,092,221...35,119,860
Ensembl chr17:35,092,221...35,121,522 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IEA
IDA
IMP		 (PMID:33321094)
(PMID:28575657), (PMID:28575658)		 InterPro
UniProt		 PMID:28575657 PMID:28575658 PMID:33321094 GO_REF:0000002 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RNF168 ring finger protein 168 involved_in TAS (PMID:22705371) UniProt PMID:22705371 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF8 ring finger protein 8 involved_in TAS (PMID:22705371) UniProt PMID:22705371 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IDA (PMID:36608669) UniProt PMID:36608669 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G VCP valosin containing protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G XRCC3 X-ray repair cross complementing 3 involved_in IMP (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chr14:103,697,617...103,715,451
Ensembl chr14:103,697,609...103,715,504 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in TAS (PMID:10391249), (PMID:20841568) UniProt PMID:10391249 PMID:20841568 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11040211), (PMID:16777961)
(PMID:17476307)		 Ensembl
MGI
GO_Central		 PMID:11040211 PMID:16777961 PMID:17476307 GO_REF:0000033 GO_REF:0000107 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G BAD BCL2 associated agonist of cell death involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15231831)
(PMID:12431371)		 Ensembl
MGI		 PMID:12431371 PMID:15231831 GO_REF:0000107 NCBI chr11:64,269,828...64,284,704
Ensembl chr11:64,269,830...64,284,704 		JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15901672)
(PMID:15967824)		 Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15901672 PMID:15967824 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:33,572,552...33,580,276
Ensembl chr 6:33,572,547...33,580,293 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
IDA
ISO
IBA		 (PMID:11912183)
(PMID:15967824)
(PMID:12952892)
(PMID:15901672)		 Ensembl
HGNC-UCL
MGI
GO_Central
TreeGrafter		 PMID:11912183 PMID:12952892 PMID:15901672 PMID:15967824 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15983387) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:15983387 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BCL2A1 BCL2 related protein A1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:79,960,892...79,971,196
Ensembl chr15:79,960,892...79,971,196 		JBrowse link
G BCL2L1 BCL2 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:14517295) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:14517295 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989 		JBrowse link
G BCL2L10 BCL2 like 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:52,109,263...52,112,775
Ensembl chr15:52,109,263...52,112,775 		JBrowse link
G BCL2L11 BCL2 like 11 involved_in
acts_upstream_of_or_within		 IEA
IDA		 (PMID:11546872) Ensembl
MGI		 PMID:11546872 GO_REF:0000107 NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,444 		JBrowse link
G BCL2L2 BCL2 like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:23,306,833...23,311,751
Ensembl chr14:23,298,790...23,311,751 		JBrowse link
G BOK BCL2 family apoptosis regulator BOK involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:241,551,393...241,574,131
Ensembl chr 2:241,551,424...241,574,131 		JBrowse link
G BRCA1 BRCA1 DNA repair associated acts_upstream_of_or_within IDA (PMID:14654789) MGI PMID:14654789 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17476307) Ensembl
MGI		 PMID:17476307 GO_REF:0000107 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G CASP2 caspase 2 involved_in TAS
IBA		 (PMID:18309324) UniProt
GO_Central		 PMID:18309324 GO_REF:0000033 NCBI chr 7:143,288,351...143,307,696
Ensembl chr 7:143,288,215...143,307,696 		JBrowse link
G CASP9 caspase 9 involved_in IMP
IEA
IBA		 (PMID:15657060) UniProt
TreeGrafter
GO_Central		 PMID:15657060 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IMP
IDA		 (PMID:12717439), (PMID:18644861)
(PMID:12402044)		 UniProt PMID:12402044 PMID:12717439 PMID:18644861 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CIDEB cell death inducing DFFA like effector b involved_in TAS (PMID:10619428) PINC PMID:10619428 NCBI chr14:24,305,187...24,311,435
Ensembl chr14:24,305,187...24,311,430 		JBrowse link
G CRIP1 cysteine rich protein 1 involved_in IDA
IBA		 (PMID:20415737) UniProt
GO_Central		 PMID:20415737 GO_REF:0000033 NCBI chr14:105,486,886...105,488,947
Ensembl chr14:105,486,317...105,488,947 		JBrowse link
G E2F1 E2F transcription factor 1 involved_in IMP (PMID:12717439) UniProt PMID:12717439 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385 		JBrowse link
G EI24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (PMID:10594026) MGI PMID:10594026 NCBI chr11:125,569,477...125,584,684
Ensembl chr11:125,569,280...125,584,684 		JBrowse link
G EPHA2 EPH receptor A2 involved_in IDA (PMID:18339848) UniProt PMID:18339848 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11005836) Ensembl
MGI		 PMID:11005836 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G FNIP2 folliculin interacting protein 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:158,769,026...158,908,050
Ensembl chr 4:158,769,026...158,908,050 		JBrowse link
G HIC1 HIC ZBTB transcriptional repressor 1 involved_in IDA
IEA		 (PMID:16269335) UniProt
Ensembl		 PMID:16269335 GO_REF:0000107 NCBI chr17:2,055,103...2,063,241
Ensembl chr17:2,054,154...2,063,241 		JBrowse link
G HMOX1 heme oxygenase 1 ISO RGD PMID:11854317 RGD:625692 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214 		JBrowse link
G HTRA2 HtrA serine peptidase 2 involved_in IMP (PMID:11602612) ParkinsonsUK-UCL PMID:11602612 NCBI chr 2:74,529,405...74,533,556
Ensembl chr 2:74,529,596...74,533,350 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11753682) Ensembl
MGI		 PMID:11753682 GO_REF:0000107 NCBI chr 6:30,743,199...30,744,547
Ensembl chr 6:30,743,199...30,744,548 		JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IMP (PMID:20188669) UniProt PMID:20188669 NCBI chr 1:206,470,476...206,496,889
Ensembl chr 1:206,470,476...206,496,889 		JBrowse link
G MAEL maelstrom spermatogenic transposon silencer involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18694567) Ensembl
MGI		 PMID:18694567 GO_REF:0000107 NCBI chr 1:166,975,582...167,022,214
Ensembl chr 1:166,975,582...167,022,214 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14562041) MGI PMID:14562041 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G MCL1 MCL1 apoptosis regulator, BCL2 family member involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15901672) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:15901672 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:150,574,558...150,579,610
Ensembl chr 1:150,560,895...150,579,738 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14562041) Ensembl
MGI		 PMID:14562041 GO_REF:0000107 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in IMP (PMID:16199525) BHF-UCL PMID:16199525 NCBI chr14:93,182,199...93,184,897
Ensembl chr14:93,182,199...93,184,923 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14744764)
(PMID:10097137)		 Ensembl
MGI		 PMID:10097137 PMID:14744764 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15324697) BHF-UCL
MGI
Ensembl		 PMID:15324697 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:14517295) MGI PMID:14517295 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in IDA (PMID:10891498) UniProt PMID:10891498 NCBI chr 3:51,957,454...51,967,466
Ensembl chr 3:51,957,454...51,974,016 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chr 5:68,215,756...68,301,821
Ensembl chr 5:68,215,740...68,301,821 		JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (PMID:12952892) MGI PMID:12952892 NCBI chr18:59,899,996...59,904,305
Ensembl chr18:59,899,996...59,904,305 		JBrowse link
G PML PML nuclear body scaffold involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA
IEA		 (PMID:12402044)
(PMID:15626733)
(PMID:9806545)		 UniProt
MGI
GO_Central
Ensembl		 PMID:9806545 PMID:12402044 PMID:15626733 GO_REF:0000033 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827 		JBrowse link
G POLB DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10197627) Ensembl
MGI		 PMID:10197627 GO_REF:0000107 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12604618) Ensembl
MGI
GO_Central		 PMID:12604618 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G SFN stratifin involved_in IDA (PMID:11574543) HGNC-UCL PMID:11574543 NCBI chr 1:26,863,149...26,864,456
Ensembl chr 1:26,863,149...26,864,456 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10811619) Ensembl
MGI		 PMID:10811619 GO_REF:0000107 NCBI chr 3:170,357,715...170,396,849
Ensembl chr 3:170,357,342...170,396,835 		JBrowse link
G SOD2 superoxide dismutase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15642323) Ensembl
MGI		 PMID:15642323 GO_REF:0000107 NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529 		JBrowse link
G TNF tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242187) Ensembl
MGI		 PMID:17242187 GO_REF:0000107 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17242187) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:17242187 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IDA (PMID:20188669) UniProt PMID:20188669 NCBI chr 9:32,540,544...32,552,586
Ensembl chr 9:32,540,544...32,552,586 		JBrowse link
G TP73 tumor protein p73 involved_in TAS (PMID:10391251) PINC PMID:10391251 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
G UACA uveal autoantigen with coiled-coil domains and ankyrin repeats acts_upstream_of_or_within ISO (PMID:15271982) MGI PMID:15271982 NCBI chr15:70,654,554...70,778,903
Ensembl chr15:70,654,554...70,763,558 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19966869) Ensembl
MGI		 PMID:19966869 GO_REF:0000107 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (PMID:11005836) MGI PMID:11005836 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEN apoptosis enhancing nuclease involved_in IDA
IBA		 (PMID:18264133) UniProt
GO_Central		 PMID:18264133 GO_REF:0000033 NCBI chr15:88,604,683...88,632,281
Ensembl chr15:88,621,337...88,632,281 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G BAG6 BAG cochaperone 6 involved_in IMP (PMID:17403783) UniProt PMID:17403783 NCBI chr 6:31,639,028...31,652,661
Ensembl chr 6:31,639,028...31,652,705 		JBrowse link
G BBC3 BCL2 binding component 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16151013) Ensembl
MGI		 PMID:16151013 GO_REF:0000107 NCBI chr19:47,220,824...47,232,860
Ensembl chr19:47,220,822...47,232,766 		JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within IMP (PMID:16384933) MGI PMID:16384933 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15735671)
(PMID:17476307)		 Ensembl
MGI		 PMID:15735671 PMID:17476307 GO_REF:0000107 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G CDIP1 cell death inducing p53 target 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:17599062) MGI
GO_Central		 PMID:17599062 GO_REF:0000033 NCBI chr16:4,510,669...4,538,773
Ensembl chr16:4,510,669...4,538,828 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12952892) Ensembl
MGI		 PMID:12952892 GO_REF:0000107 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10710310) Ensembl
MGI		 PMID:10710310 GO_REF:0000107 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G DDIT4 DNA damage inducible transcript 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:72,273,924...72,276,036
Ensembl chr10:72,273,919...72,276,036 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IDA (PMID:17349958) UniProt PMID:17349958 NCBI chr12:67,648,745...67,665,406
Ensembl chr12:67,648,338...67,665,406 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22768269) Ensembl
MGI		 PMID:22768269 GO_REF:0000107 NCBI chr15:43,772,620...43,776,966
Ensembl chr15:43,772,605...43,777,315 		JBrowse link
G EP300 E1A binding protein p300 involved_in IDA (PMID:17403783) UniProt PMID:17403783 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16537918) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:16537918 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within		 TAS
ISO
IEA
IBA		 (PMID:18974774)
(PMID:16537918)		 UniProt
MGI
TreeGrafter
GO_Central
Ensembl		 PMID:16537918 PMID:18974774 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G IFI16 interferon gamma inducible protein 16 acts_upstream_of_or_within IDA (PMID:14654789) MGI PMID:14654789 NCBI chr 1:158,999,976...159,055,151
Ensembl chr 1:158,999,968...159,055,155 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10097137) Ensembl
MGI		 PMID:10097137 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11896600) Ensembl
MGI		 PMID:11896600 GO_REF:0000107 NCBI chr16:28,532,708...28,538,974
Ensembl chr16:28,532,708...28,539,008 		JBrowse link
G PHLDA3 pleckstrin homology like domain family A member 3 involved_in IDA
IBA		 (PMID:19203586) UniProt
GO_Central		 PMID:19203586 GO_REF:0000033 NCBI chr 1:201,464,278...201,469,188
Ensembl chr 1:201,464,278...201,469,237 		JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (PMID:10807576) MGI PMID:10807576 NCBI chr18:59,899,996...59,904,305
Ensembl chr18:59,899,996...59,904,305 		JBrowse link
G PML PML nuclear body scaffold involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827 		JBrowse link
G PPP2R5C protein phosphatase 2 regulatory subunit B'gamma involved_in IMP (PMID:17245430) UniProt PMID:17245430 NCBI chr14:101,760,573...101,927,992
Ensembl chr14:101,761,709...101,927,989 		JBrowse link
G PYCARD PYD and CARD domain containing involved_in IMP (PMID:14730312) UniProt PMID:14730312 NCBI chr16:31,201,486...31,202,760
Ensembl chr16:31,201,486...31,203,450 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in IDA (PMID:17057733), (PMID:18056458) UniProt PMID:17057733 PMID:18056458 NCBI chr15:63,148,249...63,157,477
Ensembl chr15:63,125,872...63,158,021 		JBrowse link
G SHISA5 shisa family member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12135983) Ensembl
MGI		 PMID:12135983 GO_REF:0000107 NCBI chr 3:48,467,876...48,504,810
Ensembl chr 3:48,467,798...48,504,826 		JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:20100829) UniProt PMID:20100829 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IMP (PMID:21460037) UniProt PMID:21460037 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207 		JBrowse link
G TMEM109 transmembrane protein 109 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:20060811) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:20060811 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:60,914,158...60,923,443
Ensembl chr11:60,914,158...60,923,443 		JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15735665) Ensembl
MGI		 PMID:15735665 GO_REF:0000107 NCBI chr 9:32,540,544...32,552,586
Ensembl chr 9:32,540,544...32,552,586 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
IMP
IDA		 (PMID:16213212)
(PMID:17403783)
(PMID:14654789), (PMID:14744935)		 Ensembl
CAFA
UniProt
MGI		 PMID:14654789 PMID:14744935 PMID:16213212 PMID:17403783 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17122775) Ensembl
MGI		 PMID:17122775 GO_REF:0000107 NCBI chr 3:189,596,746...189,897,276
Ensembl chr 3:189,631,389...189,897,276 		JBrowse link
G TP73 tumor protein p73 involved_in
acts_upstream_of		 IDA
ISO		 (PMID:18174154), (PMID:19490146)
(PMID:15983387)		 UniProt
MGI		 PMID:15983387 PMID:18174154 PMID:19490146 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IDA (PMID:16901786) UniProt PMID:16901786 NCBI chr11:113,797,875...113,875,572
Ensembl chr11:113,797,874...113,875,572 		JBrowse link
late meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:66,870,771...66,926,382
Ensembl chr 8:66,870,749...66,922,048 		JBrowse link
meiotic DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPO11 SPO11 initiator of meiotic double strand breaks involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:57,329,803...57,343,993
Ensembl chr20:57,329,803...57,343,994 		JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26490168) Ensembl
MGI		 PMID:26490168 GO_REF:0000107 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G C14orf39 chromosome 14 open reading frame 39 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:60,435,956...60,515,544
Ensembl chr14:60,396,469...60,515,543 		JBrowse link
meiotic DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD51C RAD51 paralog C involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:58,692,573...58,735,611
Ensembl chr17:58,692,573...58,735,611 		JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPATA22 spermatogenesis associated 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22011390) InterPro
MGI
Ensembl		 PMID:22011390 GO_REF:0000002 GO_REF:0000107 NCBI chr17:3,440,019...3,513,858
Ensembl chr17:3,440,019...3,513,852 		JBrowse link
G SYCP1 synaptonemal complex protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22164254) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:22164254 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:114,854,088...114,995,370
Ensembl chr 1:114,854,863...114,995,370 		JBrowse link
G SYCP3 synaptonemal complex protein 3 acts_upstream_of_or_within ISO (PMID:22164254) MGI PMID:22164254 NCBI chr12:101,728,648...101,739,462
Ensembl chr12:101,728,648...101,739,472 		JBrowse link
G TEX12 testis expressed 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22164254) Ensembl
MGI		 PMID:22164254 GO_REF:0000107 NCBI chr11:112,167,372...112,172,556
Ensembl chr11:112,167,372...112,172,556 		JBrowse link
meiotic mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MSH6 mutS homolog 6 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
meiotic recombination nodule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCMDC2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (PMID:27760146) MGI PMID:27760146 NCBI chr 8:66,870,771...66,926,382
Ensembl chr 8:66,870,749...66,922,048 		JBrowse link
mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in TAS (PMID:10391249) PINC PMID:10391249 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G EXO1 exonuclease 1 involved_in IDA
IEA
IBA
ISS
IMP
IPI
TAS		 (PMID:14636568)
(PMID:9685493)
(PMID:11809771)
(PMID:9788596)		 UniProt
TreeGrafter
GO_Central
Reactome		 PMID:9685493 PMID:9788596 PMID:11809771 PMID:14636568 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-5358565 NCBI chr 1:241,847,986...241,889,939
Ensembl chr 1:241,847,967...241,895,148 		JBrowse link
G LIG1 DNA ligase 1 involved_in TAS Reactome Reactome:R-HSA-5358565 Reactome:R-HSA-5358606 NCBI chr19:48,115,445...48,170,344
Ensembl chr19:48,115,445...48,170,603 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
IBA
TAS
IGI		 (PMID:8128251)
(PMID:23603115)		 Ensembl
GO_Central
TreeGrafter
PINC
InterPro
MGI		 PMID:8128251 PMID:23603115 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896 		JBrowse link
G MLH3 mutL homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
NAS
TAS		 (PMID:16204034)
(PMID:12095912)
(PMID:10615123)		 Ensembl
MGI
GO_Central
TreeGrafter
InterPro
UniProt
PINC		 PMID:10615123 PMID:12095912 PMID:16204034 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:75,013,775...75,051,467
Ensembl chr14:75,013,769...75,051,532 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
IBA
IGI
IDA		 (PMID:23603115)
(PMID:7923193), (PMID:9677427)
(PMID:11555625)		 Ensembl
GO_Central
TreeGrafter
InterPro
MGI
UniProt		 PMID:7923193 PMID:9677427 PMID:11555625 PMID:23603115 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MSH3 mutS homolog 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA
IMP		 (PMID:10706084)
(PMID:16728433)
(PMID:10706084), (PMID:16728433)
(PMID:11691815)
(PMID:9677427)
(PMID:8782829)		 InterPro
MGI
GO_Central
TreeGrafter
ComplexPortal
HGNC-UCL		 PMID:8782829 PMID:9677427 PMID:10706084 PMID:11691815 PMID:16728433 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:80,654,652...80,876,815
Ensembl chr 5:80,654,652...80,876,815 		JBrowse link
G MSH4 mutS homolog 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:75,796,882...75,913,242
Ensembl chr 1:75,796,882...75,913,242 		JBrowse link
G MSH5 mutS homolog 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:31,740,005...31,762,676
Ensembl chr 6:31,739,677...31,762,676 		JBrowse link
G MSH5-SAPCD1 MSH5-SAPCD1 readthrough (NMD candidate) involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 6:31,739,948...31,764,850
Ensembl chr 6:31,740,020...31,764,851 		JBrowse link
G MSH6 mutS homolog 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IDA
IMP
IGI
IEA		 (PMID:10871409), (PMID:23622243)
(PMID:8782829)
(PMID:23603115)		 RGD
GO_Central
HGNC-UCL
MGI
InterPro
Ensembl		 PMID:8782829 PMID:10871409 PMID:18417481 PMID:23603115 PMID:23622243 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:2292505 NCBI chr 2:47,783,145...47,810,101
Ensembl chr 2:47,695,530...47,810,063 		JBrowse link
G MUTYH mutY DNA glycosylase involved_in TAS
IBA
IEA		 (PMID:7823963) PINC
GO_Central
TreeGrafter		 PMID:7823963 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:45,329,242...45,340,440
Ensembl chr 1:45,329,163...45,340,893 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IDA
IEA
IBA		 (PMID:11005803) BHF-UCL
TreeGrafter
GO_Central		 PMID:11005803 GO_REF:0000033 GO_REF:0000118 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G PMS1 PMS1 homolog 1, mismatch repair system component involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
TAS		 (PMID:9500552)
(PMID:8072530)		 Ensembl
MGI
TreeGrafter
GO_Central
InterPro
PINC		 PMID:8072530 PMID:9500552 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:189,784,450...189,877,629
Ensembl chr 2:189,784,085...189,877,629 		JBrowse link
G PMS2 PMS1 homolog 2, mismatch repair system component involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA
TAS
IDA		 (PMID:9618520)
(PMID:10359802), (PMID:10429667), (PMID:16204034), (PMID:16728433), (PMID:23071719), (PMID:9500552)
(PMID:16204034)
(PMID:11313994)
(PMID:10871409), (PMID:23709753)		 CAFA
MGI
GO_Central
TreeGrafter
Ensembl
Reactome
InterPro
HGNC-UCL		 PMID:9500552 PMID:9618520 PMID:10359802 PMID:10429667 PMID:10871409 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 Reactome:R-HSA-5358565 NCBI chr 7:5,970,925...6,009,106
Ensembl chr 7:5,970,925...6,009,130 		JBrowse link
G PMS2P1 PMS1 homolog 2, mismatch repair system component pseudogene 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:100,320,640...100,336,307
Ensembl chr 7:100,328,836...100,335,860 		JBrowse link
G PMS2P2 PMS1 homolog 2, mismatch repair system component pseudogene 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:75,343,937...75,358,997
Ensembl chr 7:75,344,015...75,359,550 		JBrowse link
G PMS2P3 PMS1 homolog 2, mismatch repair system component pseudogene 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:75,507,747...75,528,123
Ensembl chr 7:75,507,747...75,528,148
Ensembl chr 7:75,507,747...75,528,148 		JBrowse link
G PMS2P5 PMS1 homolog 2, mismatch repair system component pseudogene 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:74,890,768...74,921,138
Ensembl chr 7:74,894,116...74,897,835 		JBrowse link
G PMS2P6 PMS1 homolog 2, mismatch repair system component pseudogene 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:73,093,644...73,096,950
Ensembl chr 7:73,093,657...73,105,389 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in NAS (PMID:9099749) UniProt PMID:9099749 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in
acts_upstream_of_or_within		 IEA
IBA
NAS
IDA		 (PMID:21177858)
(PMID:23603115)		 Ensembl
GO_Central
TreeGrafter
ComplexPortal
MGI		 PMID:21177858 PMID:23603115 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:12,806,584...12,813,640
Ensembl chr19:12,806,584...12,813,640 		JBrowse link
G RNASEH2B ribonuclease H2 subunit B involved_in NAS (PMID:21177858) ComplexPortal PMID:21177858 NCBI chr13:50,909,678...50,970,460
Ensembl chr13:50,909,747...51,024,120 		JBrowse link
G RNASEH2C ribonuclease H2 subunit C involved_in NAS (PMID:21177858) ComplexPortal PMID:21177858 NCBI chr11:65,717,673...65,720,798
Ensembl chr11:65,714,005...65,720,818 		JBrowse link
G RPA1 replication protein A1 involved_in IMP (PMID:9430682) UniProt PMID:9430682 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPA2 replication protein A2 involved_in IMP (PMID:9430682) UniProt PMID:9430682 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPA3 replication protein A3 involved_in IMP
IEA
IBA		 (PMID:9430682) UniProt
TreeGrafter
GO_Central		 PMID:9430682 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IMP (PMID:23622243) UniProt PMID:23622243 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G TP73 tumor protein p73 involved_in TAS (PMID:10391249) PINC PMID:10391249 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in NAS (PMID:10391904) UniProt PMID:10391904 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in NAS (PMID:26300262) ComplexPortal PMID:26300262 NCBI chr20:5,950,652...5,998,977
Ensembl chr20:5,950,652...5,998,977 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IMP
NAS		 (PMID:26300262) UniProt
ComplexPortal		 PMID:26300262 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162 		JBrowse link
mitochondrial DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24101517) Ensembl
MGI		 PMID:24101517 GO_REF:0000107 NCBI chr 3:14,112,077...14,124,870
Ensembl chr 3:14,112,077...14,124,870 		JBrowse link
G DNA2 DNA replication helicase/nuclease 2 involved_in IDA (PMID:19487465) UniProt PMID:19487465 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121 		JBrowse link
G LIG3 DNA ligase 3 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (PMID:21390132)
(PMID:21390131), (PMID:21390132)		 BHF-UCL
MGI		 PMID:21390131 PMID:21390132 NCBI chr17:34,980,512...35,010,872
Ensembl chr17:34,980,512...35,009,743 		JBrowse link
G MGME1 mitochondrial genome maintenance exonuclease 1 involved_in TAS
IEA		 (PMID:23313956) UniProt PMID:23313956 GO_REF:0000104 NCBI chr20:17,968,590...17,991,122
Ensembl chr20:17,969,018...17,991,122 		JBrowse link
G NEURL4 neuralized E3 ubiquitin protein ligase 4 acts_upstream_of_or_within ISO (PMID:35157000) MGI PMID:35157000 NCBI chr17:7,315,628...7,329,335
Ensembl chr17:7,315,628...7,329,393 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within IMP (PMID:25378300) MGI PMID:25378300 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:184,649,738...184,694,952
Ensembl chr 4:184,649,667...184,694,963 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24101517) Ensembl
MGI		 PMID:24101517 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
mitochondrial double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
mitotic DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC7 cell division cycle 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:91,500,851...91,525,764
Ensembl chr 1:91,500,851...91,525,764 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G STK33 serine/threonine kinase 33 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:8,334,824...8,594,228
Ensembl chr11:8,391,868...8,594,289 		JBrowse link
G ZNF830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23213458) Ensembl
MGI
TreeGrafter
GO_Central		 PMID:23213458 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:34,961,540...34,963,777
Ensembl chr17:34,961,540...34,963,777 		JBrowse link
mitotic G1 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCND1 cyclin D1 involved_in IDA (PMID:19412162) UniProt PMID:19412162 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474 		JBrowse link
G CDK2 cyclin dependent kinase 2 involved_in TAS (PMID:21319273) UniProt PMID:21319273 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789 		JBrowse link
G DGKZ diacylglycerol kinase zeta involved_in IGI (PMID:16286473) UniProt PMID:16286473 NCBI chr11:46,332,926...46,380,554
Ensembl chr11:46,332,905...46,380,554 		JBrowse link
G FBXO31 F-box protein 31 involved_in IMP (PMID:19412162) UniProt PMID:19412162 NCBI chr16:87,326,987...87,392,121
Ensembl chr16:87,326,987...87,392,142 		JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19744960) Ensembl
MGI		 PMID:19744960 GO_REF:0000107 NCBI chr 2:232,697,331...232,860,605
Ensembl chr 2:232,697,299...232,860,605 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IMP (PMID:21731742) UniProt PMID:21731742 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G PTPRVP protein tyrosine phosphatase receptor type V, pseudogene acts_upstream_of_or_within ISO (PMID:16107883) MGI PMID:16107883 NCBI chr 1:202,168,051...202,189,449
Ensembl chr 1:202,168,051...202,189,455
Ensembl chr 1:202,168,051...202,189,455 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IMP (PMID:20173098) UniProt PMID:20173098 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RPA2 replication protein A2 involved_in IMP (PMID:21731742) UniProt PMID:21731742 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPS27L ribosomal protein S27 like involved_in IMP (PMID:18056458) UniProt PMID:18056458 NCBI chr15:63,148,249...63,157,477
Ensembl chr15:63,125,872...63,158,021 		JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in IDA (PMID:27906959) UniProt PMID:27906959 NCBI chr 1:225,982,702...225,999,343
Ensembl chr 1:225,982,702...225,999,343 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:16107883)
(PMID:7958916)		 Ensembl
MGI
BHF-UCL		 PMID:7958916 PMID:16107883 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045533)
(PMID:23993650)		 Ensembl
MGI		 PMID:18045533 PMID:23993650 GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IMP (PMID:21329877) UniProt PMID:21329877 NCBI chr10:28,532,779...28,623,112
Ensembl chr10:28,532,493...28,623,112 		JBrowse link
mitotic G2 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IMP (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr 4:83,459,517...83,485,100
Ensembl chr 4:83,459,517...83,523,348 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IMP (PMID:15149599) BHF-UCL PMID:15149599 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IMP
IBA		 (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProt
GO_Central		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000033 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IMP
IEA		 (PMID:19261748) UniProt PMID:19261748 GO_REF:0000104 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BLM BLM RecQ like helicase involved_in IDA (PMID:11309417) UniProt PMID:11309417 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IMP
IBA		 (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt
GO_Central		 PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000033 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IMP
IEA		 (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000104 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IDA (PMID:15150265) UniProt PMID:15150265 NCBI chr19:55,283,997...55,312,562
Ensembl chr19:55,282,072...55,312,562 		JBrowse link
G C10orf90 chromosome 10 open reading frame 90 involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chr10:126,424,997...126,670,693
Ensembl chr10:126,424,997...126,798,708 		JBrowse link
G CCNG1 cyclin G1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9464250 GO_REF:0000107 RGD:2316029 NCBI chr 5:163,437,571...163,457,640
Ensembl chr 5:163,437,569...163,446,151 		JBrowse link
G CDC14B cell division cycle 14B involved_in IDA (PMID:18662541) UniProt PMID:18662541 NCBI chr 9:96,490,939...96,619,843
Ensembl chr 9:96,490,241...96,619,843 		JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12937170) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:12937170 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:60,778,331...60,794,852
Ensembl chr10:60,778,331...60,794,852 		JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 involved_in IMP (PMID:15790566) UniProt PMID:15790566 NCBI chr17:47,967,904...47,981,781
Ensembl chr17:47,967,810...47,981,781 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IMP (PMID:23213251) UniProt PMID:23213251 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in IMP (PMID:20932473) UniProt PMID:20932473 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G CLSPN claspin involved_in IDA
IEA
IBA		 (PMID:18662541) UniProt
TreeGrafter
GO_Central		 PMID:18662541 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:35,720,213...35,769,978
Ensembl chr 1:35,720,218...35,769,978 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in ISO (PMID:37178686) UniProt PMID:37178686 NCBI chr11:46,277,662...46,321,409
Ensembl chr11:46,277,662...46,321,409 		JBrowse link
G DONSON DNA replication fork stabilization factor DONSON involved_in IMP (PMID:28191891) UniProt PMID:28191891 NCBI chr21:33,577,551...33,588,684
Ensembl chr21:33,559,542...33,588,706 		JBrowse link
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IMP
IEA
IBA		 (PMID:17085480) UniProt
TreeGrafter
GO_Central		 PMID:17085480 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:212,035,748...212,105,013
Ensembl chr 1:212,035,553...212,107,400 		JBrowse link
G FOXN3 forkhead box N3 involved_in IGI (PMID:9154802) UniProt PMID:9154802 NCBI chr14:89,156,177...89,619,165
Ensembl chr14:89,124,871...89,619,149 		JBrowse link
G FOXO4 forkhead box O4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12048180) Ensembl
MGI		 PMID:12048180 GO_REF:0000107 NCBI chr  X:71,095,851...71,103,532
Ensembl chr  X:71,095,851...71,103,532 		JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IDA (PMID:18662541) UniProt PMID:18662541 NCBI chr19:3,506,311...3,538,334
Ensembl chr19:3,506,311...3,538,334 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20467439) Ensembl
MGI		 PMID:20467439 GO_REF:0000107 NCBI chr 6:30,743,199...30,744,547
Ensembl chr 6:30,743,199...30,744,548 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14614141) MGI PMID:14614141 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G MBTPS1 membrane bound transcription factor peptidase, site 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:84,053,763...84,116,942
Ensembl chr16:84,053,761...84,116,942 		JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:21,839,617...21,885,423
Ensembl chr  X:21,839,617...21,885,423 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:14690604) Ensembl
TreeGrafter
MGI
GO_Central		 PMID:14690604 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IMP
IBA		 (PMID:27568553) UniProt
GO_Central		 PMID:27568553 GO_REF:0000033 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173 		JBrowse link
G NBN nibrin involved_in
acts_upstream_of_or_within		 IDA
ISO
IBA
IEA		 (PMID:11438675)
(PMID:18614044)		 UniProt
MGI
GO_Central
TreeGrafter
InterPro
Ensembl		 PMID:11438675 PMID:18614044 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in IMP (PMID:21741933) UniProt PMID:21741933 NCBI chr19:47,745,546...47,757,058
Ensembl chr19:47,745,546...47,757,058 		JBrowse link
G PLK1 polo like kinase 1 involved_in IDA (PMID:18662541) UniProt PMID:18662541 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367 		JBrowse link
G RINT1 RAD50 interactor 1 involved_in IMP (PMID:11096100) BHF-UCL PMID:11096100 NCBI chr 7:105,532,201...105,567,677
Ensembl chr 7:105,532,169...105,567,677 		JBrowse link
G SYF2 SYF2 pre-mRNA splicing factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22448250) Ensembl
MGI		 PMID:22448250 GO_REF:0000107 NCBI chr 1:25,222,276...25,232,502
Ensembl chr 1:25,222,276...25,232,502 		JBrowse link
G TAOK1 TAO kinase 1 involved_in IMP (PMID:17396146) UniProt PMID:17396146 NCBI chr17:29,390,363...29,551,903
Ensembl chr17:29,390,363...29,551,903 		JBrowse link
G TAOK2 TAO kinase 2 involved_in IMP (PMID:17396146) UniProt PMID:17396146 NCBI chr16:29,973,868...29,992,261
Ensembl chr16:29,973,868...29,992,261 		JBrowse link
G TAOK3 TAO kinase 3 involved_in IMP (PMID:17396146) UniProt PMID:17396146 NCBI chr12:118,149,801...118,372,907
Ensembl chr12:118,149,801...118,372,907 		JBrowse link
G TICRR TOPBP1 interacting checkpoint and replication regulator involved_in ISS
IBA		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000033 NCBI chr15:89,575,469...89,628,023
Ensembl chr15:89,575,469...89,631,056 		JBrowse link
G TOPBP1 DNA topoisomerase II binding protein 1 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:133,600,238...133,661,941
Ensembl chr 3:133,598,175...133,662,380 		JBrowse link
G TRIM39 tripartite motif containing 39 involved_in IMP (PMID:23213251) UniProt PMID:23213251 NCBI chr 6:30,326,469...30,343,729
Ensembl chr 6:30,326,479...30,343,729 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IMP (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
mitotic intra-S DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IMP (PMID:15916964) UniProt PMID:15916964 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382 		JBrowse link
G CHEK2 checkpoint kinase 2 involved_in IMP (PMID:11298456) UniProt PMID:11298456 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G EME1 essential meiotic structure-specific endonuclease 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:50,373,229...50,381,483
Ensembl chr17:50,373,220...50,381,483 		JBrowse link
G EME2 essential meiotic structure-specific endonuclease subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:1,772,810...1,781,702
Ensembl chr16:1,772,810...1,781,708 		JBrowse link
G FANCD2 FA complementation group D2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,370...10,101,932 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:655,939...657,100
Ensembl chr 6:655,939...657,100 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 involved_in TAS (PMID:17577209) UniProt PMID:17577209 NCBI chr 6:30,699,807...30,717,281
Ensembl chr 6:30,699,807...30,717,447 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:14690604), (PMID:18614044) Ensembl
TreeGrafter
MGI
GO_Central		 PMID:14690604 PMID:18614044 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15533840) Ensembl
MGI		 PMID:15533840 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:65,859,674...65,867,653
Ensembl chr11:65,857,126...65,867,653 		JBrowse link
G NEK11 NIMA related kinase 11 involved_in IDA
IBA		 (PMID:15161910) UniProt
GO_Central		 PMID:15161910 GO_REF:0000033 NCBI chr 3:131,026,877...131,350,465
Ensembl chr 3:131,026,850...131,350,465 		JBrowse link
G RAD17 RAD17 checkpoint clamp loader component involved_in IMP (PMID:15538388) UniProt PMID:15538388 NCBI chr 5:69,369,293...69,414,801
Ensembl chr 5:69,369,293...69,414,801 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:9766521) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:9766521 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:110,502,331...110,533,556
Ensembl chr12:110,501,655...110,533,556 		JBrowse link
G TIPIN TIMELESS interacting protein involved_in IMP (PMID:17102137) HGNC-UCL PMID:17102137 NCBI chr15:66,336,191...66,386,717
Ensembl chr15:66,336,191...66,386,746 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15533840) Ensembl
MGI		 PMID:15533840 GO_REF:0000107 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
negative regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD4 bromodomain containing 4 involved_in IMP (PMID:23728299) UniProt PMID:23728299 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO RGD PMID:20637979 RGD:10401658 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD44 CD44 molecule (IN blood group) involved_in IDA (PMID:17045821) BHF-UCL PMID:17045821 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402 		JBrowse link
G CD74 CD74 molecule involved_in IDA
IBA
IEA		 (PMID:17045821) BHF-UCL
GO_Central
Ensembl		 PMID:17045821 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA
ISS		 (PMID:20736167) Ensembl
BHF-UCL		 PMID:20736167 GO_REF:0000107 NCBI chr21:37,365,573...37,526,358
Ensembl chr21:37,365,573...37,526,358 		JBrowse link
G DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,635,536...206,655,158
Ensembl chr 1:206,635,536...206,684,419 		JBrowse link
G KDM1A lysine demethylase 1A involved_in IMP (PMID:17805299) BHF-UCL PMID:17805299 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IMP (PMID:29295817) UniProt PMID:29295817 NCBI chr 2:159,712,506...159,771,027
Ensembl chr 2:159,712,457...159,771,027 		JBrowse link
G MDM2 MDM2 proto-oncogene involved_in IDA (PMID:10360174), (PMID:9529249) BHF-UCL PMID:9529249 PMID:10360174 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IDA
IEA		 (PMID:17045821) BHF-UCL
Ensembl		 PMID:17045821 GO_REF:0000107 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227 		JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 involved_in IDA (PMID:16023600) UniProt PMID:16023600 NCBI chr  X:108,084,207...108,091,542
Ensembl chr  X:108,084,207...108,091,549 		JBrowse link
G PTTG1IP PTTG1 interacting protein acts_upstream_of_or_within IMP (PMID:24506068) MGI PMID:24506068 NCBI chr21:44,849,598...44,873,690
Ensembl chr21:44,849,585...44,873,903 		JBrowse link
G SIRT1 sirtuin 1 involved_in IDA (PMID:11672523) BHF-UCL PMID:11672523 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IMP (PMID:15314165) BHF-UCL PMID:15314165 NCBI chr20:49,982,980...49,988,886
Ensembl chr20:49,982,980...49,988,886 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IMP (PMID:15314165) BHF-UCL PMID:15314165 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17690110) BHF-UCL PMID:17690110 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
G YJU2 YJU2 splicing factor homolog involved_in ISS UniProt GO_REF:0000024 NCBI chr19:4,247,080...4,269,088
Ensembl chr19:4,247,080...4,269,088 		JBrowse link
negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCBP4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) MGI PMID:20817677 NCBI chr 3:51,957,454...51,967,466
Ensembl chr 3:51,957,454...51,974,016 		JBrowse link
negative regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CGAS cyclic GMP-AMP synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IMP (PMID:17049931) UniProt PMID:17049931 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
negative regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR221 microRNA 221 involved_in IDA (PMID:24147153) BHF-UCL PMID:24147153 NCBI chr  X:45,746,157...45,746,266
Ensembl chr  X:45,746,157...45,746,266 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 involved_in IMP
IBA
IEA		 (PMID:20725033) UniProt
GO_Central
TreeGrafter		 PMID:20725033 GO_REF:0000033 GO_REF:0000118 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811 		JBrowse link
G OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:94,026,340...94,048,930
Ensembl chr14:94,026,340...94,048,930 		JBrowse link
G RNF169 ring finger protein 169 involved_in IMP
IDA		 (PMID:22492721), (PMID:22733822)
(PMID:22742833)		 UniProt PMID:22492721 PMID:22733822 PMID:22742833 NCBI chr11:74,748,849...74,842,413
Ensembl chr11:74,748,849...74,842,413 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17690110) BHF-UCL PMID:17690110 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA (PMID:9461559) UniProt PMID:9461559 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G C1QBP complement C1q binding protein involved_in IDA (PMID:31353207) UniProt PMID:31353207 NCBI chr17:5,432,777...5,439,155
Ensembl chr17:5,432,777...5,448,830 		JBrowse link
G CGAS cyclic GMP-AMP synthase involved_in IDA
IBA
IEA		 (PMID:30356214), (PMID:31544964) UniProt
GO_Central
Ensembl		 PMID:30356214 PMID:31544964 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:73,423,711...73,452,297
Ensembl chr 6:73,413,515...73,452,297 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in IDA (PMID:28512243) UniProt PMID:28512243 NCBI chr20:472,498...543,790
Ensembl chr20:472,498...543,835 		JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:25520194) GO_Central
MGI		 PMID:25520194 GO_REF:0000033 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G FBH1 F-box DNA helicase 1 involved_in IDA
IEA		 (PMID:19736316) UniProt
Ensembl		 PMID:19736316 GO_REF:0000107 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594 		JBrowse link
G HELB DNA helicase B involved_in IEA
IBA
IMP		 (PMID:26774285) Ensembl
GO_Central
UniProt		 PMID:26774285 GO_REF:0000033 GO_REF:0000107 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,493...66,343,643 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IDA (PMID:32832608) UniProt PMID:32832608 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KLHL15 kelch like family member 15 involved_in IDA (PMID:27561354), (PMID:35219381) UniProt PMID:27561354 PMID:35219381 NCBI chr  X:23,983,720...24,027,186
Ensembl chr  X:23,983,716...24,027,186 		JBrowse link
G KMT5A lysine methyltransferase 5A involved_in IDA (PMID:27338793) UniProt PMID:27338793 NCBI chr12:123,384,132...123,409,353
Ensembl chr12:123,384,132...123,409,353 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IDA (PMID:29656893) UniProt PMID:29656893 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G MAGEF1 MAGE family member F1 involved_in IDA (PMID:29225034) UniProt PMID:29225034 NCBI chr 3:184,710,364...184,712,064
Ensembl chr 3:184,710,364...184,712,064 		JBrowse link
G PARPBP PARP1 binding protein involved_in IEA
IBA
IMP		 (PMID:22153967) InterPro
GO_Central
UniProt		 PMID:22153967 GO_REF:0000002 GO_REF:0000033 NCBI chr12:102,120,183...102,197,520
Ensembl chr12:102,120,183...102,197,520 		JBrowse link
G PLK1 polo like kinase 1 involved_in IDA (PMID:28512243) UniProt PMID:28512243 NCBI chr16:23,678,889...23,690,367
Ensembl chr16:23,677,656...23,690,367 		JBrowse link
G POLQ DNA polymerase theta involved_in IEA
IMP
IDA		 (PMID:28695890)
(PMID:25642963), (PMID:36455556)		 Ensembl
UniProt		 PMID:25642963 PMID:28695890 PMID:36455556 GO_REF:0000107 NCBI chr 3:121,431,431...121,545,988
Ensembl chr 3:121,431,431...121,545,988 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked involved_in IDA (PMID:28735897) UniProt PMID:28735897 NCBI chr  X:106,611,978...106,679,439
Ensembl chr  X:106,611,930...106,679,439 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) Ensembl
MGI		 PMID:25520194 GO_REF:0000107 NCBI chr17:75,626,854...75,667,154
Ensembl chr17:75,626,845...75,667,189 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IEA
IDA		 (PMID:23333306) Ensembl
UniProt		 PMID:23333306 GO_REF:0000107 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G RMI2 RecQ mediated genome instability 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:11,345,459...11,351,760
Ensembl chr16:11,249,619...11,381,662 		JBrowse link
G SENP3 SUMO specific peptidase 3 involved_in IDA (PMID:32832608) UniProt PMID:32832608 NCBI chr17:7,561,919...7,571,969
Ensembl chr17:7,561,919...7,571,969 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IDA
IBA		 (PMID:29656893) UniProt
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IDA (PMID:29656893) UniProt PMID:29656893 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IDA
IBA		 (PMID:29656893) UniProt
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IMP (PMID:25294876) UniProt PMID:25294876 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 involved_in IDA
IEA		 (PMID:23333306), (PMID:23345425) UniProt
Ensembl		 PMID:23333306 PMID:23345425 GO_REF:0000107 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IDA (PMID:30612738) UniProt PMID:30612738 NCBI chr 1:156,031,247...156,053,798
Ensembl chr 1:156,035,299...156,053,798 		JBrowse link
negative regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUNIP aurora kinase A and ninein interacting protein involved_in IDA (PMID:29042561) UniProt PMID:29042561 NCBI chr 1:25,831,906...25,859,457
Ensembl chr 1:25,831,913...25,859,458 		JBrowse link
G CYREN cell cycle regulator of NHEJ involved_in IEA
IDA		 (PMID:28959974) InterPro
UniProt		 PMID:28959974 GO_REF:0000002 NCBI chr 7:135,092,303...135,172,469
Ensembl chr 7:135,092,363...135,170,795 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IMP (PMID:25820262) UniProt PMID:25820262 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:19549901) UniProt PMID:19549901 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291 		JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IMP (PMID:26359349) UniProt PMID:26359349 NCBI chr 8:144,291,604...144,314,720
Ensembl chr 8:144,291,591...144,314,720 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in IDA (PMID:24316220) UniProt PMID:24316220 NCBI chr11:94,415,570...94,512,412
Ensembl chr11:94,415,570...94,493,885 		JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 involved_in IDA (PMID:28241136) UniProt PMID:28241136 NCBI chr16:4,693,562...4,695,859
Ensembl chr16:4,693,562...4,695,859 		JBrowse link
G TFIP11 tuftelin interacting protein 11 involved_in ISS (PMID:17389648) BHF-UCL PMID:17389648 NCBI chr22:26,491,240...26,512,473
Ensembl chr22:26,491,225...26,512,505 		JBrowse link
negative regulation of double-strand break repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OGG1 8-oxoguanine DNA glycosylase acts_upstream_of_or_within IDA (PMID:19506022) MGI PMID:19506022 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACKR3 atypical chemokine receptor 3 involved_in IMP (PMID:20388803) BHF-UCL PMID:20388803 NCBI chr 2:236,537,122...236,582,354
Ensembl chr 2:236,567,787...236,582,354 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G BCL2L1 BCL2 like 1 involved_in IDA (PMID:16608847) BHF-UCL PMID:16608847 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989 		JBrowse link
G BID BH3 interacting domain death agonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26219591) Ensembl
MGI		 PMID:26219591 GO_REF:0000107 NCBI chr22:17,734,138...17,774,665
Ensembl chr22:17,734,138...17,774,770 		JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IMP (PMID:23352644) UniProt PMID:23352644 NCBI chr 8:22,604,757...22,621,514
Ensembl chr 8:22,604,757...22,620,964 		JBrowse link
G CDKN2D cyclin dependent kinase inhibitor 2D involved_in IMP (PMID:15750620) BHF-UCL PMID:15750620 NCBI chr19:10,566,460...10,568,979
Ensembl chr19:10,566,460...10,569,059 		JBrowse link
G CLU clusterin involved_in IMP (PMID:16113678) BHF-UCL PMID:16113678 NCBI chr 8:27,596,917...27,614,700
Ensembl chr 8:27,596,917...27,614,700 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 involved_in IDA (PMID:20388803) BHF-UCL PMID:20388803 NCBI chr10:44,370,165...44,385,097
Ensembl chr10:44,370,165...44,386,493 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor involved_in IMP
IEA		 (PMID:24214091) UniProt
InterPro		 PMID:24214091 GO_REF:0000002 NCBI chr11:82,901,736...82,934,659
Ensembl chr11:82,899,975...82,958,277 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083 		JBrowse link
G SNAI1 snail family transcriptional repressor 1 involved_in IMP (PMID:15314165) BHF-UCL PMID:15314165 NCBI chr20:49,982,980...49,988,886
Ensembl chr20:49,982,980...49,988,886 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IMP (PMID:15314165) BHF-UCL PMID:15314165 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IMP (PMID:16551573) BHF-UCL PMID:16551573 NCBI chr19:19,119,169...19,138,478
Ensembl chr19:19,119,169...19,138,513 		JBrowse link
G TPT1 tumor protein, translationally-controlled 1 acts_upstream_of_or_within IMP (PMID:11598139) MGI PMID:11598139 NCBI chr13:45,333,471...45,341,183
Ensembl chr13:45,333,471...45,341,284 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IDA (PMID:18632609) BHF-UCL PMID:18632609 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,305...116,701,300 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966869) Ensembl
MGI		 PMID:19966869 GO_REF:0000107 NCBI chr11:11,841,972...11,961,887
Ensembl chr11:11,841,423...11,961,887 		JBrowse link
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATAD5 ATPase family AAA domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in TAS (PMID:1286168) BHF-UCL PMID:1286168 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128 		JBrowse link
G BCL2L12 BCL2 like 12 acts_upstream_of_or_within ISO (PMID:20837658) MGI PMID:20837658 NCBI chr19:49,665,142...49,673,916
Ensembl chr19:49,665,142...49,673,916 		JBrowse link
G CD44 CD44 molecule (IN blood group) involved_in IDA (PMID:17045821) BHF-UCL PMID:17045821 NCBI chr11:35,139,171...35,232,402
Ensembl chr11:35,138,882...35,232,402 		JBrowse link
G CD74 CD74 molecule involved_in IEA
IBA
IMP		 (PMID:17045821) Ensembl
GO_Central
BHF-UCL		 PMID:17045821 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:150,401,639...150,412,910
Ensembl chr 5:150,401,637...150,412,969 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22768269) Ensembl
MGI		 PMID:22768269 GO_REF:0000107 NCBI chr15:43,772,620...43,776,966
Ensembl chr15:43,772,605...43,777,315 		JBrowse link
G ING2 inhibitor of growth family member 2 involved_in TAS (PMID:21124965) BHF-UCL PMID:21124965 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429 		JBrowse link
G KDM1A lysine demethylase 1A involved_in IMP (PMID:17805299) BHF-UCL PMID:17805299 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 involved_in IMP (PMID:29295817) UniProt PMID:29295817 NCBI chr 2:159,712,506...159,771,027
Ensembl chr 2:159,712,457...159,771,027 		JBrowse link
G MIF macrophage migration inhibitory factor involved_in IDA (PMID:17045821) BHF-UCL PMID:17045821 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227 		JBrowse link
G MUC1 mucin 1, cell surface associated involved_in IDA (PMID:15710329) BHF-UCL PMID:15710329 NCBI chr 1:155,185,824...155,192,915
Ensembl chr 1:155,185,824...155,192,916 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA
ISS		 (PMID:11672522) Ensembl
BHF-UCL		 PMID:11672522 GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 involved_in IC (PMID:15899866) BHF-UCL PMID:15899866 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TAF9B TATA-box binding protein associated factor 9b involved_in IC (PMID:15899866) BHF-UCL PMID:15899866 NCBI chr  X:78,129,748...78,139,650
Ensembl chr  X:78,129,748...78,139,650 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in IMP (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr12:120,443,964...120,446,384
Ensembl chr12:120,443,964...120,446,384 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in IMP (PMID:17719541) UniProt PMID:17719541 NCBI chr12:54,369,136...54,391,298
Ensembl chr12:54,369,133...54,391,298 		JBrowse link
negative regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1R10 protein phosphatase 1 regulatory subunit 10 involved_in IGI (PMID:23426265) BHF-UCL PMID:23426265 NCBI chr 6:30,600,413...30,617,243
Ensembl chr 6:30,600,413...30,618,612 		JBrowse link
negative regulation of protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IMP (PMID:14690602) BHF-UCL PMID:14690602 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in ISO (MGI:3758502|PMID:14690602) BHF-UCL PMID:14690602 MGI:3758502 NCBI chr 5:83,077,547...83,374,473
Ensembl chr 5:83,077,498...83,353,787 		JBrowse link
negative regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253 		JBrowse link
negative regulation of telomere single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TERF2 telomeric repeat binding factor 2 involved_in NAS (PMID:17395247) BHF-UCL PMID:17395247 NCBI chr16:69,355,567...69,386,007
Ensembl chr16:69,355,567...69,408,571 		JBrowse link
nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATXN3 ataxin 3 involved_in TAS (PMID:10915768) PINC PMID:10915768 NCBI chr14:92,044,775...92,106,582
Ensembl chr14:92,044,496...92,106,621 		JBrowse link
G BIVM-ERCC5 BIVM-ERCC5 readthrough involved_in IEA InterPro GO_REF:0000002 NCBI chr13:102,807,146...102,875,995
Ensembl chr13:102,799,110...102,875,994 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IMP (PMID:16845393) UniProt PMID:16845393 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G BRIP1 BRCA1 interacting helicase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G CETN1 centrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:580,380...582,114
Ensembl chr18:580,380...582,114 		JBrowse link
G CETN2 centrin 2 involved_in IDA
IBA		 (PMID:15964821) UniProt
GO_Central		 PMID:15964821 GO_REF:0000033 NCBI chr  X:152,826,994...152,830,757
Ensembl chr  X:152,826,994...152,830,757 		JBrowse link
G COMMD1 copper metabolism domain containing 1 involved_in IMP (PMID:23144634) CACAO PMID:23144634 NCBI chr 2:61,888,391...62,136,058
Ensembl chr 2:61,888,724...62,147,247 		JBrowse link
G DCLRE1A DNA cross-link repair 1A acts_upstream_of_or_within ISO (PMID:10848582) MGI PMID:10848582 NCBI chr10:113,834,725...113,854,394
Ensembl chr10:113,834,725...113,854,383 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in TAS (PMID:8407967) PINC PMID:8407967 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in TAS
ISS
IDA		 (PMID:8407967)
(PMID:33937266)
(PMID:19109893)		 PINC
UniProt		 PMID:8407967 PMID:19109893 PMID:33937266 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
IDA
IMP		 (PMID:22547097)
(PMID:7657672)
(PMID:3290851)		 Ensembl
ComplexPortal
UniProt
MGI		 PMID:3290851 PMID:7657672 PMID:22547097 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP
NAS		 (PMID:11950998), (PMID:9651581)
(PMID:8692841)
(PMID:2184031)		 InterPro
MGI
UniProt
Ensembl		 PMID:2184031 PMID:8692841 PMID:9651581 PMID:11950998 GO_REF:0000002 GO_REF:0000107 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IEA
IMP		 (PMID:17466626), (PMID:17509950), (PMID:8692841) InterPro
UniProt		 PMID:8692841 PMID:17466626 PMID:17509950 GO_REF:0000002 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within
involved_in		 IDA
IMP		 (PMID:10644440)
(PMID:11790111), (PMID:14728600), (PMID:8797827)
(PMID:10413517), (PMID:22547097), (PMID:32034146)		 MGI
UniProt		 PMID:8797827 PMID:10413517 PMID:10644440 PMID:11790111 PMID:14728600 More... NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS
IMP
IDA		 (PMID:10022922)
(PMID:7657672)
(PMID:11259578), (PMID:32522879), (PMID:32821917), (PMID:8090225)		 InterPro
MGI
Reactome
UniProt		 PMID:7657672 PMID:8090225 PMID:10022922 PMID:11259578 PMID:32522879 More... GO_REF:0000002 Reactome:R-HSA-5690988 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995 		JBrowse link
G FAN1 FANCD2 and FANCI associated nuclease 1 involved_in IMP
IDA		 (PMID:20603016)
(PMID:20603015), (PMID:25430771)		 UniProt PMID:20603015 PMID:20603016 PMID:25430771 NCBI chr15:30,903,852...30,943,108
Ensembl chr15:30,890,559...30,943,108 		JBrowse link
G FANCC FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8704201) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:8704201 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:95,099,054...95,317,709
Ensembl chr 9:95,099,054...95,426,796 		JBrowse link
G GTF2H1 general transcription factor IIH subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:18,322,567...18,367,045
Ensembl chr11:18,322,295...18,367,045 		JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:71,035,347...71,067,676
Ensembl chr 5:71,035,016...71,067,689 		JBrowse link
G GTF2H2C GTF2H2 family member C involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221
Ensembl chr 5:69,560,191...69,595,221 		JBrowse link
G GTF2H2C_2 GTF2H2 family member C, copy 2 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
G GTF2H3 general transcription factor IIH subunit 3 involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr12:123,633,829...123,662,604
Ensembl chr12:123,633,739...123,662,604 		JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:30,908,207...30,914,106
Ensembl chr 6:30,908,207...30,914,106 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IEA
IMP		 (PMID:23637614) InterPro
MGI
Ensembl		 PMID:23637614 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:47,963,288...47,979,615
Ensembl chr 7:47,963,288...47,979,615 		JBrowse link
G HUS1B HUS1 checkpoint clamp component B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:655,939...657,100
Ensembl chr 6:655,939...657,100 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IDA (PMID:32034146) UniProt PMID:32034146 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G MNAT1 MNAT1 component of CDK activating kinase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:60,734,761...60,969,965
Ensembl chr14:60,734,742...60,969,965 		JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in IDA
IBA
IEA		 (PMID:8990169) UniProt
GO_Central
Ensembl		 PMID:8990169 GO_REF:0000033 GO_REF:0000107 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866 		JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in
acts_upstream_of_or_within		 IEA
IDA		 (PMID:19506022) InterPro
MGI		 PMID:19506022 GO_REF:0000002 NCBI chr 3:9,749,952...9,783,108
Ensembl chr 3:9,749,944...9,788,219 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in TAS (PMID:10446193) UniProt PMID:10446193 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in IMP (PMID:1508673) UniProt PMID:1508673 NCBI chr  X:24,693,918...24,996,986
Ensembl chr  X:24,693,873...24,996,986 		JBrowse link
G POLL DNA polymerase lambda involved_in IDA (PMID:10982892) UniProt PMID:10982892 NCBI chr10:101,578,882...101,588,270
Ensembl chr10:101,578,882...101,588,270 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA
TAS
IDA		 (PMID:8808275)
(PMID:9372924)		 InterPro
PINC
UniProt		 PMID:8808275 PMID:9372924 GO_REF:0000002 GO_REF:0000104 NCBI chr19:12,945,862...12,953,642
Ensembl chr19:12,945,855...12,953,642 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein involved_in IEA
IDA
TAS		 (PMID:19941824), (PMID:8168482), (PMID:9734359)
(PMID:8168482)		 UniProt
InterPro
PINC		 PMID:8168482 PMID:9734359 PMID:19941824 GO_REF:0000002 GO_REF:0000104 NCBI chr 9:107,283,279...107,332,194
Ensembl chr 9:107,283,137...107,332,192 		JBrowse link
G RPA1 replication protein A1 involved_in IMP
IBA
NAS		 (PMID:9430682) UniProt
GO_Central
ComplexPortal		 PMID:9430682 GO_REF:0000033 NCBI chr17:1,830,005...1,900,082
Ensembl chr17:1,829,702...1,900,082 		JBrowse link
G RPA2 replication protein A2 involved_in IMP
IBA
IEA
NAS		 (PMID:9430682) UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:9430682 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RPA3 replication protein A3 involved_in IMP
IBA
IEA
NAS		 (PMID:9430682) UniProt
GO_Central
TreeGrafter
ComplexPortal		 PMID:9430682 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:7,636,518...7,718,607
Ensembl chr 7:7,636,518...7,718,607 		JBrowse link
G RPA4 replication protein A4 involved_in IDA
IBA		 (PMID:19996105) UniProt
GO_Central		 PMID:19996105 GO_REF:0000033 NCBI chr  X:96,883,908...96,885,467
Ensembl chr  X:96,883,908...96,885,467 		JBrowse link
G SLC30A9 solute carrier family 30 member 9 involved_in TAS (PMID:17349999) BHF-UCL PMID:17349999 NCBI chr 4:41,990,530...42,090,461
Ensembl chr 4:41,990,502...42,090,461 		JBrowse link
G SLX4 SLX4 structure-specific endonuclease subunit involved_in IMP (PMID:19596236) UniProt PMID:19596236 NCBI chr16:3,581,181...3,611,606
Ensembl chr16:3,581,181...3,611,606 		JBrowse link
G TP53 tumor protein p53 involved_in IMP (PMID:7663514) UniProt PMID:7663514 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G USP44 ubiquitin specific peptidase 44 involved_in ISS (PMID:33937266) UniProt PMID:33937266 NCBI chr12:95,516,560...95,551,681
Ensembl chr12:95,516,560...95,551,476 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:11950998), (PMID:12509265)
(PMID:21148310)		 InterPro
MGI
CACAO		 PMID:11950998 PMID:12509265 PMID:21148310 GO_REF:0000002 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 TAS
ISO
IEA
IBA
ISS
IDA		 (PMID:10873465)
(PMID:12815074)
(PMID:17049932), (PMID:19615386)
(PMID:9067411)
(PMID:33937266)
(PMID:11259578), (PMID:19941824), (PMID:8168482), (PMID:9734359)		 PINC
MGI
TreeGrafter
GO_Central
UniProt
InterPro
Ensembl		 PMID:8168482 PMID:9067411 PMID:9734359 PMID:10873465 PMID:11259578 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
nucleotide-excision repair involved in interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IDA
IBA
IEA		 (PMID:32034146) UniProt
GO_Central
TreeGrafter		 PMID:32034146 GO_REF:0000033 GO_REF:0000118 NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
nucleotide-excision repair, DNA damage recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XPA XPA, DNA damage recognition and repair factor involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
nucleotide-excision repair, DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IMP (PMID:17466626) UniProt PMID:17466626 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in IDA
IBA
IEA		 (PMID:12517771), (PMID:17290226) UniProt
GO_Central
TreeGrafter		 PMID:12517771 PMID:17290226 GO_REF:0000033 GO_REF:0000118 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G POLB DNA polymerase beta NOT|involved_in IMP (PMID:20227374) UniProt PMID:20227374 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IC
IBA
IEA
IMP		 (PMID:20713449)
(PMID:20227374)		 UniProt
GO_Central
TreeGrafter		 PMID:20227374 PMID:20713449 GO_REF:0000033 GO_REF:0000118 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IMP
IBA
IEA		 (PMID:20227374) UniProt
GO_Central
TreeGrafter		 PMID:20227374 GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IMP
IBA
IEA		 (PMID:20227374) UniProt
GO_Central
TreeGrafter		 PMID:20227374 GO_REF:0000033 GO_REF:0000118 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLK DNA polymerase kappa involved_in IMP (PMID:20227374) UniProt PMID:20227374 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
nucleotide-excision repair, preincision complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GTF2H5 general transcription factor IIH subunit 5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:23637614) Ensembl
MGI
GO_Central		 PMID:23637614 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:158,168,350...158,199,344
Ensembl chr 6:158,168,350...158,199,344 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRY2 cryptochrome circadian regulator 2 NOT|involved_in IDA (PMID:12627958) UniProt PMID:12627958 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248 		JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM168A family with sequence similarity 168 member A involved_in IDA
IBA		 (PMID:25260657) UniProt
GO_Central		 PMID:25260657 GO_REF:0000033 NCBI chr11:73,400,487...73,598,112
Ensembl chr11:73,400,487...73,598,189 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IDA (PMID:18973764) UniProt PMID:18973764 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
positive regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCAR2 cell cycle and apoptosis regulator 2 involved_in IMP (PMID:23352644) UniProt PMID:23352644 NCBI chr 8:22,604,757...22,621,514
Ensembl chr 8:22,604,757...22,620,964 		JBrowse link
G TELO2 telomere maintenance 2 involved_in NAS (PMID:20810650) ComplexPortal PMID:20810650 NCBI chr16:1,493,360...1,510,454
Ensembl chr16:1,493,344...1,510,457 		JBrowse link
G TTI1 TELO2 interacting protein 1 involved_in NAS
IMP		 (PMID:20810650)
(PMID:36724785)		 ComplexPortal
UniProt		 PMID:20810650 PMID:36724785 NCBI chr20:37,983,021...38,033,456
Ensembl chr20:37,983,007...38,033,461 		JBrowse link
G TTI2 TELO2 interacting protein 2 involved_in NAS (PMID:20810650) ComplexPortal PMID:20810650 NCBI chr 8:33,498,722...33,513,135
Ensembl chr 8:33,473,386...33,513,185 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKRD1 ankyrin repeat domain 1 involved_in IDA (PMID:20599664) BHF-UCL PMID:20599664 NCBI chr10:90,912,096...90,921,087
Ensembl chr10:90,912,096...90,921,087 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IMP (PMID:9733515) BHF-UCL PMID:9733515 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IMP (PMID:9925639) BHF-UCL PMID:9925639 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in IDA (PMID:9529249) BHF-UCL PMID:9529249 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IMP (PMID:15660129) UniProt PMID:15660129 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199 		JBrowse link
G EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:15680327) InterPro
MGI
UniProt
Ensembl		 PMID:15680327 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:8,073,360...8,102,548
Ensembl chr 6:8,073,360...8,102,559 		JBrowse link
G EEF1E1-BLOC1S5 EEF1E1-BLOC1S5 readthrough (NMD candidate) involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:8,013,567...8,102,595
Ensembl chr 6:8,015,726...8,102,530 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:219,968,600...220,046,505
Ensembl chr 1:219,968,600...220,046,530 		JBrowse link
G HIC1 HIC ZBTB transcriptional repressor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,055,103...2,063,241
Ensembl chr17:2,054,154...2,063,241 		JBrowse link
G MSX1 msh homeobox 1 involved_in IC (PMID:15705871) BHF-UCL PMID:15705871 NCBI chr 4:4,859,665...4,863,936
Ensembl chr 4:4,859,665...4,863,936 		JBrowse link
G PLA2R1 phospholipase A2 receptor 1 involved_in IMP (PMID:19197340) UniProt PMID:19197340 NCBI chr 2:159,923,933...160,062,615
Ensembl chr 2:159,932,006...160,062,615 		JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in IMP (PMID:15102863) UniProt PMID:15102863 NCBI chr18:59,899,996...59,904,305
Ensembl chr18:59,899,996...59,904,305 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in ISS
IEA		 (PMID:20736167) BHF-UCL
Ensembl		 PMID:20736167 GO_REF:0000107 NCBI chr15:38,252,836...38,357,249
Ensembl chr15:38,252,836...38,357,249 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISS (PMID:20736167) BHF-UCL PMID:20736167 NCBI chr 2:65,307,175...65,432,599
Ensembl chr 2:65,310,851...65,432,637 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ING4 inhibitor of growth family member 4 involved_in IDA (PMID:15251430) UniProt PMID:15251430 NCBI chr12:6,650,301...6,663,119
Ensembl chr12:6,650,301...6,663,142 		JBrowse link
G PYHIN1 pyrin and HIN domain family member 1 involved_in IDA (PMID:16479015) UniProt PMID:16479015 NCBI chr 1:158,931,552...158,990,870
Ensembl chr 1:158,930,796...158,977,059 		JBrowse link
G RPL26 ribosomal protein L26 involved_in IMP (PMID:16213212) CAFA PMID:16213212 NCBI chr17:8,377,516...8,383,193
Ensembl chr17:8,377,516...8,383,213 		JBrowse link
G ZNF385A zinc finger protein 385A involved_in IMP (PMID:17719541) UniProt PMID:17719541 NCBI chr12:54,369,136...54,391,298
Ensembl chr12:54,369,133...54,391,298 		JBrowse link
G ZNHIT1 zinc finger HIT-type containing 1 involved_in IDA (PMID:17700068) UniProt PMID:17700068 NCBI chr 7:101,218,165...101,224,190
Ensembl chr 7:101,218,165...101,224,190 		JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in IMP (PMID:17525340), (PMID:19261748) UniProt PMID:17525340 PMID:19261748 NCBI chr 4:83,459,517...83,485,100
Ensembl chr 4:83,459,517...83,523,348 		JBrowse link
G ACTL6A actin like 6A involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 involved_in ISO (MGI:3698695|PMID:17121854) UniProt PMID:17121854 MGI:3698695 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,125...6,419,414 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in IMP
IEA		 (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProt
InterPro		 PMID:19261746 PMID:19261748 PMID:19261749 GO_REF:0000002 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA
IMP		 (PMID:19261748) UniProt PMID:19261748 GO_REF:0000104 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IMP (PMID:17525340), (PMID:19261748) UniProt PMID:17525340 PMID:19261748 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA
IMP		 (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000104 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G CBX8 chromobox 8 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23572236 GO_REF:0000107 RGD:9586727 NCBI chr17:79,792,132...79,797,077
Ensembl chr17:79,792,132...79,801,683 		JBrowse link
G CCDC117 coiled-coil domain containing 117 involved_in IMP (PMID:30742009) UniProt PMID:30742009 NCBI chr22:28,772,695...28,789,301
Ensembl chr22:28,772,674...28,789,301 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in IEP (PMID:16255782) UniProt PMID:16255782 NCBI chr19:33,373,709...33,382,686
Ensembl chr19:33,373,685...33,382,686 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IMP (PMID:24049074) UniProt PMID:24049074 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982 		JBrowse link
G EGFR epidermal growth factor receptor involved_in IDA (PMID:17115032) UniProt PMID:17115032 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IGI
IMP		 (PMID:22483866) UniProt PMID:22483866 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IMP (PMID:7664335) UniProt PMID:7664335 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in IMP
IBA
IEA		 (PMID:19234442) UniProt
GO_Central
TreeGrafter		 PMID:19234442 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G EYA2 EYA transcriptional coactivator and phosphatase 2 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:46,894,843...47,188,844
Ensembl chr20:46,894,624...47,188,844 		JBrowse link
G EYA3 EYA transcriptional coactivator and phosphatase 3 involved_in IMP
IBA
IEA		 (PMID:19234442) UniProt
GO_Central
TreeGrafter		 PMID:19234442 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:27,970,344...28,088,610
Ensembl chr 1:27,970,344...28,088,637 		JBrowse link
G EYA4 EYA transcriptional coactivator and phosphatase 4 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:133,240,593...133,532,128
Ensembl chr 6:133,240,514...133,532,128 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in IDA (PMID:14975937) UniProt PMID:14975937 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G H2AX H2A.X variant histone involved_in NAS (PMID:19234442) UniProt PMID:19234442 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944 		JBrowse link
G INO80C INO80 complex subunit C involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303 		JBrowse link
G INO80E INO80 complex subunit E involved_in ISO
IEA		 ComplexPortal
Ensembl		 GO_REF:0000107 GO_REF:0000114 NCBI chr16:29,996,241...30,005,791
Ensembl chr16:29,995,715...30,005,793 		JBrowse link
G MARCHF6-DT MARCHF6 divergent transcript involved_in IDA (PMID:35219381) UniProt PMID:35219381 NCBI chr 5:10,343,103...10,354,057
Ensembl chr 5:10,323,547...10,354,062 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr12:49,558,299...49,568,142
Ensembl chr12:49,556,544...49,568,145 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr11:129,863,636...129,895,578
Ensembl chr11:129,863,636...129,895,590 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 involved_in IMP (PMID:18819933) UniProt PMID:18819933 NCBI chr 2:100,818,723...100,996,829
Ensembl chr 2:100,820,139...100,996,829 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chr10:49,818,279...49,942,027
Ensembl chr10:49,818,279...49,970,203 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IMP (PMID:24939902) UniProt PMID:24939902 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G RNF168 ring finger protein 168 involved_in IDA
IMP
IEA		 (PMID:19203578), (PMID:19203579)
(PMID:23760478)		 UniProt PMID:19203578 PMID:19203579 PMID:23760478 GO_REF:0000104 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA
IDA		 (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 GO_REF:0000104 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IDA (PMID:23911537) UniProt PMID:23911537 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:19934257) UniProt PMID:19934257 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IMP (PMID:24790221) UniProt PMID:24790221 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,020...54,115,657 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in IMP (PMID:25928429) UniProt PMID:25928429 NCBI chr12:4,321,213...4,360,028
Ensembl chr12:4,307,763...4,360,028 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IMP (PMID:16551573) BHF-UCL PMID:16551573 NCBI chr19:19,119,169...19,138,478
Ensembl chr19:19,119,169...19,138,513 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IDA (PMID:17178852) UniProt PMID:17178852 NCBI chr19:58,544,064...58,550,715
Ensembl chr19:58,544,064...58,550,722 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IMP (PMID:16129784) HGNC-UCL PMID:16129784 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 1:193,012,254...193,060,076
Ensembl chr 1:193,012,250...193,060,080 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in IMP
IBA		 (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:19261748) UniProt
GO_Central		 PMID:17525340 PMID:17525341 PMID:17525342 PMID:19261748 GO_REF:0000033 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IDA (PMID:25512560) UniProt PMID:25512560 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902 		JBrowse link
G ACTL6A actin like 6A involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTL6B actin like 6B involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 7:100,643,097...100,656,448
Ensembl chr 7:100,643,097...100,656,448 		JBrowse link
G ARID1A AT-rich interaction domain 1A involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104 		JBrowse link
G ARID1B AT-rich interaction domain 1B involved_in NAS (PMID:16932743) ComplexPortal PMID:16932743 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779 		JBrowse link
G ARID2 AT-rich interaction domain 2 involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr12:45,729,706...45,908,037
Ensembl chr12:45,729,706...45,908,040 		JBrowse link
G BCL7A BAF chromatin remodeling complex subunit BCL7A involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr12:122,021,884...122,062,044
Ensembl chr12:122,019,422...122,062,044 		JBrowse link
G BCL7B BAF chromatin remodeling complex subunit BCL7B involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr 7:73,536,356...73,557,690
Ensembl chr 7:73,536,356...73,557,690 		JBrowse link
G BCL7C BAF chromatin remodeling complex subunit BCL7C involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr16:30,833,626...30,894,077
Ensembl chr16:30,833,626...30,894,302 		JBrowse link
G BRD7 bromodomain containing 7 involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988 		JBrowse link
G DDX11 DEAD/H-box helicase 11 involved_in IMP (PMID:23797032) UniProt PMID:23797032 NCBI chr12:31,073,860...31,104,799
Ensembl chr12:31,073,860...31,104,799 		JBrowse link
G DPF1 double PHD fingers 1 involved_in NAS (PMID:16932743) ComplexPortal PMID:16932743 NCBI chr19:38,211,006...38,229,695
Ensembl chr19:38,211,006...38,229,714 		JBrowse link
G DPF2 double PHD fingers 2 involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr11:65,333,852...65,354,262
Ensembl chr11:65,333,843...65,354,262 		JBrowse link
G DPF3 double PHD fingers 3 involved_in NAS (PMID:16932743) ComplexPortal PMID:16932743 NCBI chr14:72,609,034...72,894,101
Ensembl chr14:72,609,034...72,894,101 		JBrowse link
G FAM178B family with sequence similarity 178 member B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:96,875,885...96,986,580
Ensembl chr 2:96,875,882...96,986,580 		JBrowse link
G FMN2 formin 2 involved_in IDA (PMID:26287480) UniProt PMID:26287480 NCBI chr 1:240,091,883...240,475,187
Ensembl chr 1:240,014,348...240,475,187 		JBrowse link
G FOXM1 forkhead box M1 involved_in IMP (PMID:17101782) UniProt PMID:17101782 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,680...2,877,174 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:73,362,658...73,364,171
Ensembl chr 6:73,362,658...73,364,171 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase involved_in IDA (PMID:24147153) BHF-UCL PMID:24147153 NCBI chr10:129,467,241...129,770,983
Ensembl chr10:129,467,190...129,770,983 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:73,368,555...73,369,897
NCBI chr 6:73,392,932...73,394,611
Ensembl chr 6:73,368,555...73,395,133 		JBrowse link
G PBRM1 polybromo 1 involved_in NAS (PMID:25066234) ComplexPortal PMID:25066234 NCBI chr 3:52,545,367...52,685,913
Ensembl chr 3:52,545,352...52,685,917 		JBrowse link
G PHF10 PHD finger protein 10 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 6:169,703,902...169,724,500
Ensembl chr 6:169,703,902...169,725,566 		JBrowse link
G SIRT1 sirtuin 1 involved_in IDA (PMID:32538779) UniProt PMID:32538779 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SIRT6 sirtuin 6 involved_in IDA
IEA		 (PMID:23911928), (PMID:31995034), (PMID:32538779) UniProt
Ensembl		 PMID:23911928 PMID:31995034 PMID:32538779 GO_REF:0000107 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SLF1 SMC5-SMC6 complex localization factor 1 involved_in IEA
IDA		 (PMID:25931565) InterPro
UniProt		 PMID:25931565 GO_REF:0000002 NCBI chr 5:94,618,231...94,697,621
Ensembl chr 5:94,618,669...94,739,436 		JBrowse link
G SLF2 SMC5-SMC6 complex localization factor 2 involved_in IDA
IBA		 (PMID:25931565) UniProt
GO_Central		 PMID:25931565 GO_REF:0000033 NCBI chr10:100,912,963...100,965,134
Ensembl chr10:100,912,963...100,965,134 		JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in NAS (PMID:16932743) ComplexPortal PMID:16932743 NCBI chr 9:2,015,347...2,193,624
Ensembl chr 9:1,980,290...2,193,624 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009 		JBrowse link
G SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr 3:47,585,269...47,781,893
Ensembl chr 3:47,585,269...47,782,106 		JBrowse link
G SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr12:56,162,359...56,189,483
Ensembl chr12:56,162,359...56,189,567 		JBrowse link
G SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr12:50,085,342...50,100,707
Ensembl chr12:50,085,200...50,100,707 		JBrowse link
G SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr17:63,832,081...63,842,685
Ensembl chr17:63,832,081...63,843,065 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in NAS (PMID:16932743) ComplexPortal PMID:16932743 NCBI chr 7:151,238,780...151,277,149
Ensembl chr 7:151,238,764...151,277,896 		JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in NAS (PMID:16932743), (PMID:25066234) ComplexPortal PMID:16932743 PMID:25066234 NCBI chr17:40,624,962...40,647,818
Ensembl chr17:40,624,962...40,648,654 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IMP (PMID:23509288) UniProt PMID:23509288 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306 		JBrowse link
G SPIRE1 spire type actin nucleation factor 1 involved_in IMP (PMID:26287480) UniProt PMID:26287480 NCBI chr18:12,446,512...12,662,091
Ensembl chr18:12,446,512...12,658,107 		JBrowse link
G SPIRE2 spire type actin nucleation factor 2 involved_in IMP (PMID:26287480) UniProt PMID:26287480 NCBI chr16:89,828,475...89,871,319
Ensembl chr16:89,818,179...89,871,319 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IMP (PMID:23797032) UniProt PMID:23797032 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IDA (PMID:16129784) ComplexPortal PMID:16129784 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IDA (PMID:16129784) ComplexPortal PMID:16129784 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IDA (PMID:27715493) UniProt PMID:27715493 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502 		JBrowse link
G ZCWPW1 zinc finger CW-type and PWWP domain containing 1 involved_in ISS
IEA		 ARUK-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:100,400,872...100,428,703
Ensembl chr 7:100,400,826...100,428,992 		JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902 		JBrowse link
G ACTL6A actin like 6A involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR2 actin related protein 2 involved_in IDA (PMID:29925947) UniProt PMID:29925947 NCBI chr 2:65,227,831...65,271,253
Ensembl chr 2:65,227,788...65,271,253 		JBrowse link
G ARID2 AT-rich interaction domain 2 involved_in IMP (PMID:28381560) CACAO PMID:28381560 NCBI chr12:45,729,706...45,908,037
Ensembl chr12:45,729,706...45,908,040 		JBrowse link
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25520194) MGI PMID:25520194 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G BRD8 bromodomain containing 8 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 5:138,139,770...138,178,630
Ensembl chr 5:138,139,770...138,178,953 		JBrowse link
G CREBBP CREB binding protein involved_in IDA (PMID:38128537) UniProt PMID:38128537 NCBI chr16:3,725,054...3,880,713
Ensembl chr16:3,725,054...3,880,713 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 1:44,213,471...44,220,673
Ensembl chr 1:44,213,455...44,220,681 		JBrowse link
G EP400 E1A binding protein p400 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr12:131,949,942...132,080,460
Ensembl chr12:131,949,942...132,080,460 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr10:32,267,751...32,378,769
Ensembl chr10:32,267,751...32,378,798 		JBrowse link
G EPC2 enhancer of polycomb homolog 2 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 2:148,644,751...148,787,569
Ensembl chr 2:148,644,440...148,787,569 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IMP (PMID:25820262) UniProt PMID:25820262 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:25520194) GO_Central
MGI		 PMID:25520194 GO_REF:0000033 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G FUS FUS RNA binding protein involved_in IDA (PMID:10567410) UniProt PMID:10567410 NCBI chr16:31,180,110...31,194,871
Ensembl chr16:31,180,138...31,191,605 		JBrowse link
G HDGFL2 HDGF like 2 involved_in IMP (PMID:26721387) UniProt PMID:26721387 NCBI chr19:4,472,297...4,502,207
Ensembl chr19:4,472,297...4,502,208 		JBrowse link
G HELQ helicase, POLQ like involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:83,407,346...83,455,883
Ensembl chr 4:83,407,343...83,455,855 		JBrowse link
G ING3 inhibitor of growth family member 3 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 7:120,950,777...120,977,216
Ensembl chr 7:120,950,763...120,977,216 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IDA (PMID:27153538), (PMID:32832608) ComplexPortal PMID:27153538 PMID:32832608 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISS
IMP		 (PMID:31609975) UniProt PMID:31609975 GO_REF:0000024 NCBI chr 6:73,362,658...73,364,171
Ensembl chr 6:73,362,658...73,364,171 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr17:51,177,425...51,260,958
Ensembl chr17:51,177,425...51,260,163 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 1:37,489,993...37,514,766
Ensembl chr 1:37,489,993...37,514,766 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139 		JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158 		JBrowse link
G MRGBP MRG domain binding protein involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr20:62,796,473...62,801,729
Ensembl chr20:62,796,473...62,801,729 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IMP (PMID:27568553) UniProt PMID:27568553 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173 		JBrowse link
G NBN nibrin involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G OOEP oocyte expressed protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:73,368,555...73,369,897
NCBI chr 6:73,392,932...73,394,611
Ensembl chr 6:73,368,555...73,395,133 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IDA (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G PELI1 pellino E3 ubiquitin protein ligase 1 involved_in IDA (PMID:30952868) UniProt PMID:30952868 NCBI chr 2:64,092,652...64,144,420
Ensembl chr 2:64,092,652...64,144,420 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in IDA (PMID:32832608) UniProt PMID:32832608 NCBI chr19:4,007,736...4,039,386
Ensembl chr19:4,007,736...4,039,386 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 involved_in IDA (PMID:15741314), (PMID:29651020) UniProt PMID:15741314 PMID:29651020 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IDA (PMID:17996710), (PMID:17996711) UniProt PMID:17996710 PMID:17996711 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RNF126 ring finger protein 126 involved_in IDA (PMID:36563124) UniProt PMID:36563124 NCBI chr19:647,526...663,214
Ensembl chr19:647,526...663,233 		JBrowse link
G RNF8 ring finger protein 8 involved_in IDA (PMID:23115235) UniProt PMID:23115235 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G SKP2 S-phase kinase associated protein 2 involved_in IDA
IEA		 (PMID:22464731) UniProt
Ensembl		 PMID:22464731 GO_REF:0000107 NCBI chr 5:36,152,111...36,193,530
Ensembl chr 5:36,151,989...36,196,849 		JBrowse link
G TIMELESS timeless circadian regulator involved_in IDA (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831 		JBrowse link
G VPS72 vacuolar protein sorting 72 homolog involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr 1:151,176,304...151,190,197
Ensembl chr 1:151,176,304...151,195,321 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in IDA (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431 		JBrowse link
G WDR48 WD repeat domain 48 involved_in IDA (PMID:27239033), (PMID:27463890) UniProt PMID:27239033 PMID:27463890 NCBI chr 3:39,052,016...39,096,664
Ensembl chr 3:39,052,013...39,096,671 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IDA (PMID:25512560) UniProt PMID:25512560 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502 		JBrowse link
G YEATS4 YEATS domain containing 4 involved_in IDA (PMID:27153538) ComplexPortal PMID:27153538 NCBI chr12:69,359,743...69,427,072
Ensembl chr12:69,359,710...69,390,870 		JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase involved_in IDA (PMID:26237645) UniProt PMID:26237645 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,511...241,519,799 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within IMP (PMID:24550317) MGI PMID:24550317 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519 		JBrowse link
G KMT5B lysine methyltransferase 5B involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr11:68,154,863...68,213,648
Ensembl chr11:68,154,863...68,213,852 		JBrowse link
G KMT5C lysine methyltransferase 5C involved_in IMP (PMID:28114273) UniProt PMID:28114273 NCBI chr19:55,339,876...55,348,121
Ensembl chr19:55,339,853...55,348,121 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in IDA
NAS		 (PMID:29656893) UniProt
ComplexPortal		 PMID:29656893 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 involved_in IDA (PMID:24598253) UniProt PMID:24598253 NCBI chr 3:51,942,363...51,948,867
Ensembl chr 3:51,942,345...51,948,867 		JBrowse link
G PNKP polynucleotide kinase 3'-phosphatase involved_in IMP (PMID:12032095) CACAO PMID:12032095 NCBI chr19:49,861,204...49,867,576
Ensembl chr19:49,859,882...49,878,351 		JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit involved_in IDA (PMID:26237645) UniProt PMID:26237645 NCBI chr 8:47,773,111...47,960,136
Ensembl chr 8:47,773,111...47,960,178 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IDA
IEA		 (PMID:28241136) UniProt
Ensembl		 PMID:28241136 GO_REF:0000107 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G SETMAR SET domain and mariner transposase fusion gene involved_in IDA (PMID:20620605), (PMID:21491884) UniProt PMID:20620605 PMID:21491884 NCBI chr 3:4,303,369...4,317,265
Ensembl chr 3:4,303,332...4,317,265 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IDA
IBA
NAS		 (PMID:29656893) UniProt
GO_Central
ComplexPortal		 PMID:29656893 GO_REF:0000033 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IDA
NAS		 (PMID:29656893), (PMID:29789392) UniProt
ComplexPortal		 PMID:29656893 PMID:29789392 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IDA
NAS
IBA		 (PMID:29656893) UniProt
ComplexPortal
GO_Central		 PMID:29656893 GO_REF:0000033 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IMP (PMID:25294876) UniProt PMID:25294876 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:22019940 GO_REF:0000107 RGD:13432143 NCBI chr 3:25,597,905...25,664,907
Ensembl chr 3:25,597,978...25,664,909 		JBrowse link
G WRAP53 WD repeat containing antisense to TP53 involved_in IDA (PMID:25512560) UniProt PMID:25512560 NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502 		JBrowse link
positive regulation of error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP1 ubiquitin specific peptidase 1 involved_in TAS Reactome Reactome:R-HSA-110314 NCBI chr 1:62,436,395...62,451,804
Ensembl chr 1:62,436,297...62,451,804 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within IMP (PMID:23361013) MGI PMID:23361013 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594 		JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chr11:47,604,317...47,642,559
Ensembl chr11:47,617,315...47,642,607 		JBrowse link
G NACC2 NACC family member 2 involved_in IDA (PMID:22926524) BHF-UCL PMID:22926524 NCBI chr 9:136,006,537...136,095,289
Ensembl chr 9:136,006,537...136,095,289 		JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16816390) Ensembl
MGI		 PMID:16816390 GO_REF:0000107 NCBI chr19:4,007,736...4,039,386
Ensembl chr19:4,007,736...4,039,386 		JBrowse link
G PLSCR1 phospholipid scramblase 1 acts_upstream_of_or_within ISO (PMID:12509439) MGI PMID:12509439 NCBI chr 3:146,515,180...146,544,607
Ensembl chr 3:146,515,180...146,544,856 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr11:67,391,986...67,398,412
Ensembl chr11:67,317,871...67,398,410 		JBrowse link
G RPS3 ribosomal protein S3 involved_in IMP (PMID:22510408) UniProt PMID:22510408 NCBI chr11:75,399,518...75,422,302
Ensembl chr11:75,399,515...75,422,280 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10811619) Ensembl
MGI		 PMID:10811619 GO_REF:0000107 NCBI chr 3:170,357,715...170,396,849
Ensembl chr 3:170,357,342...170,396,835 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL26 ribosomal protein L26 involved_in IMP
IEA		 (PMID:16213212) CAFA
Ensembl		 PMID:16213212 GO_REF:0000107 NCBI chr17:8,377,516...8,383,193
Ensembl chr17:8,377,516...8,383,213 		JBrowse link
G STEAP3 STEAP3 metalloreductase acts_upstream_of_or_within ISO (PMID:18617898) MGI PMID:18617898 NCBI chr 2:119,223,834...119,265,652
Ensembl chr 2:119,223,831...119,265,652 		JBrowse link
G TP73 tumor protein p73 acts_upstream_of_or_within ISO (PMID:15983387) MGI PMID:15983387 NCBI chr 1:3,652,516...3,736,201
Ensembl chr 1:3,652,516...3,736,201 		JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC10 histone deacetylase 10 involved_in IDA (PMID:26221039) UniProt PMID:26221039 NCBI chr22:50,245,183...50,251,265
Ensembl chr22:50,245,183...50,251,405 		JBrowse link
G HMGB1 high mobility group box 1 involved_in IDA (PMID:15014079) UniProt PMID:15014079 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G PRKCG protein kinase C gamma involved_in IDA (PMID:15808853) HGNC-UCL PMID:15808853 NCBI chr19:53,881,094...53,907,652
Ensembl chr19:53,879,190...53,907,652 		JBrowse link
positive regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IDA (PMID:15342622) UniProt PMID:15342622 NCBI chr 2:173,075,517...173,268,015
Ensembl chr 2:173,075,435...173,268,015 		JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IGI (PMID:28002403) UniProt PMID:28002403 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IMP
IEA
IGI		 (PMID:28002403) UniProt
Ensembl		 PMID:28002403 GO_REF:0000107 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
positive regulation of telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944 		JBrowse link
G INO80C INO80 complex subunit C involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303 		JBrowse link
G INO80E INO80 complex subunit E involved_in ISO
IEA		 ComplexPortal
Ensembl		 GO_REF:0000107 GO_REF:0000114 NCBI chr16:29,996,241...30,005,791
Ensembl chr16:29,995,715...30,005,793 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr12:49,558,299...49,568,142
Ensembl chr12:49,556,544...49,568,145 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr11:129,863,636...129,895,578
Ensembl chr11:129,863,636...129,895,590 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,020...54,115,657 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 1:193,012,254...193,060,076
Ensembl chr 1:193,012,250...193,060,080 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
postreplication repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA1 BRCA1 DNA repair associated involved_in IDA (PMID:17349954) HGNC-UCL PMID:17349954 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G CTBP1-DT CTBP1 divergent transcript involved_in IMP (PMID:35849344) UniProt PMID:35849344 NCBI chr 4:1,249,440...1,253,007
Ensembl chr 4:1,248,877...1,288,856 		JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA		 (PMID:7628020)
(PMID:7923193)		 Ensembl
MGI
UniProt		 PMID:7628020 PMID:7923193 GO_REF:0000107 NCBI chr 2:47,403,067...47,709,830
Ensembl chr 2:47,403,067...47,663,146 		JBrowse link
G PEDS1-UBE2V1 PEDS1-UBE2V1 readthrough involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:50,081,124...50,153,723
Ensembl chr20:50,081,124...50,153,637 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10871396) Ensembl
MGI
UniProt		 PMID:10871396 GO_REF:0000107 GO_REF:0000117 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G RAD18 RAD18 E3 ubiquitin protein ligase involved_in IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:8,877,075...8,963,472
Ensembl chr 3:8,775,402...8,963,773 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in NAS (PMID:1559696) UniProt PMID:1559696 NCBI chr  X:119,574,563...119,584,423
Ensembl chr  X:119,474,802...119,591,083 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in IDA
NAS		 (PMID:14981545)
(PMID:1559696)		 UniProt PMID:1559696 PMID:14981545 NCBI chr 5:134,371,569...134,392,108
Ensembl chr 5:134,371,184...134,392,108 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in IMP
IEA
IBA		 (PMID:17349954) HGNC-UCL
TreeGrafter
GO_Central		 PMID:17349954 GO_REF:0000033 GO_REF:0000118 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2NL ubiquitin conjugating enzyme E2 N like (gene/pseudogene) NOT|involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:143,884,071...143,885,255
Ensembl chr  X:143,884,071...143,885,255 		JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:50,081,124...50,115,957
Ensembl chr20:50,081,124...50,115,959 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
G WDR33 WD repeat domain 33 involved_in NAS (PMID:11162572) UniProt PMID:11162572 NCBI chr 2:127,701,027...127,811,171
Ensembl chr 2:127,701,027...127,811,187 		JBrowse link
protection from non-homologous end joining at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACD ACD shelterin complex subunit and telomerase recruitment factor involved_in ISS
IEA		 (PMID:18185984) BHF-UCL
Ensembl		 PMID:18185984 GO_REF:0000107 NCBI chr16:67,657,512...67,660,260
Ensembl chr16:67,657,512...67,660,810 		JBrowse link
G DCLRE1B DNA cross-link repair 1B involved_in IMP
IEA		 (PMID:16730175), (PMID:20479256) UniProt
Ensembl		 PMID:16730175 PMID:20479256 GO_REF:0000107 NCBI chr 1:113,904,619...113,914,086
Ensembl chr 1:113,904,619...113,914,086 		JBrowse link
G NBN nibrin involved_in IDA
IEA		 (PMID:28216226) UniProt
Ensembl		 PMID:28216226 GO_REF:0000107 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP
IPI		 (PMID:15968270)
(PMID:14690602), (PMID:17499040)
(PMID:24095731)		 Ensembl
MGI
GO_Central
BHF-UCL
InterPro		 PMID:14690602 PMID:15968270 PMID:17499040 PMID:24095731 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr16:69,355,567...69,386,007
Ensembl chr16:69,355,567...69,408,571 		JBrowse link
G TERF2IP TERF2 interacting protein NOT|involved_in ISO (MGI:4440768|PMID:20339076), (MGI:4839412|PMID:20622869) UniProt PMID:20339076 PMID:20622869 MGI:4440768 MGI:4839412 NCBI chr16:75,760,050...75,914,672
Ensembl chr16:75,647,773...75,761,872 		JBrowse link
G TERF2IP TERF2 interacting protein NOT|involved_in ISS
IBA
IMP		 (PMID:17499040) UniProt
GO_Central
BHF-UCL		 PMID:17499040 GO_REF:0000024 GO_REF:0000033 NCBI chr16:75,647,773...75,657,432
Ensembl chr16:75,647,773...75,761,872 		JBrowse link
G TFIP11 tuftelin interacting protein 11 involved_in IC (PMID:17389648) BHF-UCL PMID:17389648 NCBI chr22:26,491,240...26,512,473
Ensembl chr22:26,491,225...26,512,505 		JBrowse link
protein-DNA covalent cross-linking repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in IDA (PMID:36608669) UniProt PMID:36608669 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IDA (PMID:32165630) UniProt PMID:32165630 NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039 		JBrowse link
G GCNA germ cell nuclear acidic peptidase involved_in IMP (PMID:30914427) UniProt PMID:30914427 NCBI chr  X:71,578,437...71,613,583
Ensembl chr  X:71,578,437...71,613,583 		JBrowse link
G HMCES 5-hydroxymethylcytosine binding, ES cell specific involved_in IDA
IEA		 (PMID:37519246), (PMID:37950866) UniProt
InterPro		 PMID:37519246 PMID:37950866 GO_REF:0000002 NCBI chr 3:129,278,832...129,306,186
Ensembl chr 3:129,278,828...129,306,186 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IEA
IDA		 (PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32152270), (PMID:32649882), (PMID:36608669) Ensembl
UniProt		 PMID:27852435 PMID:27871365 PMID:27871366 PMID:32152270 PMID:32649882 More... GO_REF:0000107 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G TEX264 testis expressed 264, ER-phagy receptor involved_in IDA
IEA
IBA		 (PMID:32152270) UniProt
TreeGrafter
GO_Central		 PMID:32152270 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:51,671,252...51,704,323
Ensembl chr 3:51,662,693...51,704,323 		JBrowse link
G TRAIP TRAF interacting protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:49,828,601...49,856,564
Ensembl chr 3:49,828,601...49,856,574 		JBrowse link
G VCP valosin containing protein involved_in IDA (PMID:32152270) UniProt PMID:32152270 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G VCPIP1 valosin containing protein interacting protein 1 involved_in IDA (PMID:32649882) UniProt PMID:32649882 NCBI chr 8:66,628,487...66,667,231
Ensembl chr 8:66,628,487...66,667,231 		JBrowse link
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB2 damage specific DNA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15558025) Ensembl
MGI		 PMID:15558025 GO_REF:0000107 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9150142) Ensembl
MGI		 PMID:9150142 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G POLB DNA polymerase beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:12388548 GO_REF:0000107 RGD:633643 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10871396) Ensembl
MGI		 PMID:10871396 GO_REF:0000107 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10454634) Ensembl
MGI		 PMID:10454634 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12660172) Ensembl
MGI		 PMID:12660172 GO_REF:0000107 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA
IMP		 (PMID:21149730) Ensembl
UniProt		 PMID:21149730 GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17049932) Ensembl
MGI		 PMID:17049932 GO_REF:0000107 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
recombinational interstrand cross-link repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MCM8 minichromosome maintenance 8 homologous recombination repair factor involved_in IMP (PMID:23401855) UniProt PMID:23401855 NCBI chr20:5,950,652...5,998,977
Ensembl chr20:5,950,652...5,998,977 		JBrowse link
G MCM9 minichromosome maintenance 9 homologous recombination repair factor involved_in IEA
IMP		 (PMID:23401855) Ensembl
UniProt		 PMID:23401855 GO_REF:0000107 NCBI chr 6:118,813,455...118,935,159
Ensembl chr 6:118,813,442...118,935,162 		JBrowse link
recombinational repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTBP1-DT CTBP1 divergent transcript involved_in IMP (PMID:35849344) UniProt PMID:35849344 NCBI chr 4:1,249,440...1,253,007
Ensembl chr 4:1,248,877...1,288,856 		JBrowse link
G HROB homologous recombination factor with OB-fold involved_in IEA InterPro GO_REF:0000002 NCBI chr17:44,141,930...44,162,476
Ensembl chr17:44,141,906...44,162,476 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IMP
IBA		 (PMID:21659603) UniProt
GO_Central		 PMID:21659603 GO_REF:0000033 NCBI chr12:2,876,265...2,889,524
Ensembl chr12:2,876,258...2,889,524 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in NAS (PMID:9362500) ComplexPortal PMID:9362500 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in NAS (PMID:9362500) ComplexPortal PMID:9362500 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048 		JBrowse link
G ZGRF1 zinc finger GRF-type containing 1 involved_in IMP
IDA		 (PMID:32640219) UniProt PMID:32640219 NCBI chr 4:112,539,339...112,636,909
Ensembl chr 4:112,539,333...112,636,995 		JBrowse link
regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IDA (PMID:34102106) UniProt PMID:34102106 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
regulation of DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr 2:214,725,646...214,809,683
Ensembl chr 2:214,725,646...214,809,683 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr13:32,315,508...32,400,268
Ensembl chr13:32,315,086...32,400,268 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549 		JBrowse link
G CUL4A cullin 4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19481525) Ensembl
MGI		 PMID:19481525 GO_REF:0000107 NCBI chr13:113,208,193...113,267,108
Ensembl chr13:113,208,193...113,267,108 		JBrowse link
G ETAA1 ETAA1 activator of ATR kinase involved_in IDA
IBA		 (PMID:27723717), (PMID:27723720) UniProt
GO_Central		 PMID:27723717 PMID:27723720 GO_REF:0000033 NCBI chr 2:67,397,333...67,412,089
Ensembl chr 2:67,397,322...67,412,089 		JBrowse link
G FBXO4 F-box protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21911473) Ensembl
MGI		 PMID:21911473 GO_REF:0000107 NCBI chr 5:41,925,281...42,040,404
Ensembl chr 5:41,925,254...41,941,743 		JBrowse link
G FEM1B fem-1 homolog B involved_in IMP (PMID:19330022) UniProt PMID:19330022 NCBI chr15:68,277,745...68,295,862
Ensembl chr15:68,277,745...68,295,862 		JBrowse link
G NEK1 NIMA related kinase 1 involved_in ISO (MGI:5619475|PMID:18843199) CACAO PMID:18843199 MGI:5619475 NCBI chr 4:169,392,809...169,612,583
Ensembl chr 4:169,369,704...169,612,632 		JBrowse link
G RAD51 RAD51 recombinase involved_in NAS (PMID:14636569) ComplexPortal PMID:14636569 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RFWD3 ring finger and WD repeat domain 3 involved_in IMP (PMID:21504906) UniProt PMID:21504906 NCBI chr16:74,621,399...74,666,877
Ensembl chr16:74,621,399...74,666,877 		JBrowse link
G RNASEH2B ribonuclease H2 subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22802351) Ensembl
MGI		 PMID:22802351 GO_REF:0000107 NCBI chr13:50,909,678...50,970,460
Ensembl chr13:50,909,747...51,024,120 		JBrowse link
G RPA2 replication protein A2 involved_in IMP (PMID:21504906) UniProt PMID:21504906 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G WDR76 WD repeat domain 76 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:43,827,002...43,868,412
Ensembl chr15:43,826,980...43,868,412 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KMT5A lysine methyltransferase 5A involved_in IMP
IBA
IEA		 (PMID:17707234) UniProt
GO_Central
TreeGrafter		 PMID:17707234 GO_REF:0000033 GO_REF:0000118 NCBI chr12:123,384,132...123,409,353
Ensembl chr12:123,384,132...123,409,353 		JBrowse link
G NPM1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16199867) MGI PMID:16199867 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810 		JBrowse link
G SMYD2 SET and MYND domain containing 2 involved_in IMP (PMID:17108971) UniProt PMID:17108971 NCBI chr 1:214,281,159...214,337,131
Ensembl chr 1:214,281,102...214,337,131 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IMP (PMID:19234109) GO_Central PMID:19234109 NCBI chr 6:21,593,751...21,598,619
Ensembl chr 6:21,593,751...21,598,619 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21522133) Ensembl
MGI		 PMID:21522133 GO_REF:0000107 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21522133)
(PMID:16079796)		 Ensembl
MGI		 PMID:16079796 PMID:21522133 GO_REF:0000107 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180 		JBrowse link
regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COPS3 COP9 signalosome subunit 3 involved_in IMP (PMID:15861129) UniProt PMID:15861129 NCBI chr17:17,246,616...17,281,246
Ensembl chr17:17,246,616...17,281,273 		JBrowse link
regulation of DNA double-strand break processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HELB DNA helicase B involved_in IMP
IEA		 (PMID:26774285) UniProt
Ensembl		 PMID:26774285 GO_REF:0000107 NCBI chr12:66,302,493...66,343,643
Ensembl chr12:66,302,493...66,343,643 		JBrowse link
regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABRAXAS1 abraxas 1, BRCA1 A complex subunit involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr 4:83,459,517...83,485,100
Ensembl chr 4:83,459,517...83,523,348 		JBrowse link
G ACTL6A actin like 6A involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTR5 actin related protein 5 involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G ACTR8 actin related protein 8 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:53,858,992...53,882,152
Ensembl chr 3:53,867,066...53,882,152 		JBrowse link
G ATXN7 ataxin 7 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 3:63,863,144...64,003,462
Ensembl chr 3:63,863,155...64,003,462 		JBrowse link
G ATXN7L3 ataxin 7 like 3 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr17:44,191,805...44,199,884
Ensembl chr17:44,191,805...44,200,113 		JBrowse link
G BABAM1 BRISC and BRCA1 A complex member 1 involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr19:17,267,443...17,279,337
Ensembl chr19:17,267,376...17,281,249 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr 2:27,888,709...28,338,901
Ensembl chr 2:27,889,941...28,338,901 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr 2:214,725,646...214,809,683
Ensembl chr 2:214,725,646...214,809,683 		JBrowse link
G BPHL biphenyl hydrolase like involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:3,118,376...3,153,578
Ensembl chr 6:3,118,374...3,153,578 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in IDA (PMID:20493174) UniProt PMID:20493174 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792 		JBrowse link
G ENY2 ENY2 transcription and export complex 2 subunit involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 8:109,334,347...109,345,954
Ensembl chr 8:109,334,324...109,345,954 		JBrowse link
G IER3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20467439) Ensembl
MGI		 PMID:20467439 GO_REF:0000107 NCBI chr 6:30,743,199...30,744,547
Ensembl chr 6:30,743,199...30,744,548 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G INO80B INO80 complex subunit B involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr 2:74,455,087...74,457,944
Ensembl chr 2:74,455,087...74,457,944 		JBrowse link
G INO80C INO80 complex subunit C involved_in ISO ComplexPortal GO_REF:0000114 NCBI chr18:35,468,333...35,497,960
Ensembl chr18:35,452,230...35,497,979 		JBrowse link
G INO80D INO80 complex subunit D involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 2:205,993,721...206,086,174
Ensembl chr 2:205,993,721...206,086,303 		JBrowse link
G INO80E INO80 complex subunit E involved_in ISO
IEA		 ComplexPortal
Ensembl		 GO_REF:0000107 GO_REF:0000114 NCBI chr16:29,996,241...30,005,791
Ensembl chr16:29,995,715...30,005,793 		JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr17:42,113,111...42,121,367
Ensembl chr17:42,113,111...42,121,367 		JBrowse link
G KAT2B lysine acetyltransferase 2B involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr 3:20,040,446...20,154,404
Ensembl chr 3:20,040,446...20,154,404 		JBrowse link
G MCRS1 microspherule protein 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr12:49,558,299...49,568,142
Ensembl chr12:49,556,544...49,568,145 		JBrowse link
G NFRKB nuclear factor related to kappaB binding protein involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr11:129,863,636...129,895,578
Ensembl chr11:129,863,636...129,895,590 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase involved_in IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr10:49,818,279...49,942,027
Ensembl chr10:49,818,279...49,970,203 		JBrowse link
G PEDS1-UBE2V1 PEDS1-UBE2V1 readthrough involved_in TAS (PMID:10089880) PINC PMID:10089880 NCBI chr20:50,081,124...50,153,723
Ensembl chr20:50,081,124...50,153,637 		JBrowse link
G PHF13 PHD finger protein 13 involved_in IDA (PMID:23034801) UniProt PMID:23034801 NCBI chr 1:6,613,731...6,624,030
Ensembl chr 1:6,613,731...6,624,030 		JBrowse link
G POLH DNA polymerase eta involved_in TAS (PMID:10398605) PINC PMID:10398605 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
G RADX RPA1 related single stranded DNA binding protein, X-linked involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:106,611,978...106,679,439
Ensembl chr  X:106,611,930...106,679,439 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr16:70,523,816...70,577,668
Ensembl chr16:70,523,791...70,577,670 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr 6:144,094,884...144,095,573
Ensembl chr 6:144,094,884...144,095,573 		JBrowse link
G SGF29 SAGA complex associated factor 29 involved_in NAS
IEA		 (PMID:11564863) ComplexPortal
Ensembl		 PMID:11564863 GO_REF:0000107 NCBI chr16:28,553,920...28,591,790
Ensembl chr16:28,553,915...28,591,790 		JBrowse link
G SIRT7 sirtuin 7 involved_in IDA (PMID:30944854) UniProt PMID:30944854 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323 		JBrowse link
G SUPT20H SPT20 homolog, SAGA complex component involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr13:37,009,312...37,059,688
Ensembl chr13:37,009,312...37,059,713 		JBrowse link
G SUPT3H SPT3 homolog, SAGA and STAGA complex component involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 6:44,809,057...45,377,934
Ensembl chr 6:44,809,317...45,377,953 		JBrowse link
G SUPT7L SPT7 like, STAGA complex subunit gamma involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr 2:27,642,568...27,663,614
Ensembl chr 2:27,650,809...27,663,840 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23695662) MGI PMID:23695662 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016 		JBrowse link
G TADA1 transcriptional adaptor 1 involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr 1:166,856,510...166,876,264
Ensembl chr 1:166,856,510...166,876,264 		JBrowse link
G TADA2B transcriptional adaptor 2B involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr 4:7,043,372...7,057,952
Ensembl chr 4:7,041,899...7,057,952 		JBrowse link
G TADA3 transcriptional adaptor 3 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 3:9,779,967...9,793,011
Ensembl chr 3:9,779,967...9,793,011 		JBrowse link
G TAF10 TATA-box binding protein associated factor 10 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr11:6,606,294...6,612,216
Ensembl chr11:6,606,294...6,612,539 		JBrowse link
G TAF12 TATA-box binding protein associated factor 12 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 1:28,602,850...28,648,269
Ensembl chr 1:28,587,829...28,648,291 		JBrowse link
G TAF2 TATA-box binding protein associated factor 2 involved_in NAS (PMID:11406595) ComplexPortal PMID:11406595 NCBI chr 8:119,730,774...119,832,841
Ensembl chr 8:119,730,774...119,832,863 		JBrowse link
G TAF4 TATA-box binding protein associated factor 4 involved_in NAS (PMID:11406595) ComplexPortal PMID:11406595 NCBI chr20:61,974,798...62,065,881
Ensembl chr20:61,953,469...62,065,881 		JBrowse link
G TAF5 TATA-box binding protein associated factor 5 involved_in NAS (PMID:11406595) ComplexPortal PMID:11406595 NCBI chr10:103,367,976...103,389,065
Ensembl chr10:103,367,966...103,389,065 		JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 1:229,593,134...229,626,122
Ensembl chr 1:229,593,134...229,626,122 		JBrowse link
G TAF6 TATA-box binding protein associated factor 6 involved_in NAS (PMID:11406595) ComplexPortal PMID:11406595 NCBI chr 7:100,107,070...100,127,171
Ensembl chr 7:100,106,876...100,119,841 		JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like involved_in NAS (PMID:11564863) ComplexPortal PMID:11564863 NCBI chr11:62,771,396...62,787,342
Ensembl chr11:62,771,357...62,787,342 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 involved_in NAS (PMID:11406595) ComplexPortal PMID:11406595 NCBI chr 5:141,318,490...141,320,784
Ensembl chr 5:141,259,884...141,320,784 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 5:69,364,743...69,369,824
Ensembl chr 5:69,362,026...69,370,013 		JBrowse link
G TFPT TCF3 fusion partner involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr19:54,107,020...54,115,657
Ensembl chr19:54,107,020...54,115,657 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N involved_in TAS (PMID:10089880) PINC PMID:10089880 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBE2V1 ubiquitin conjugating enzyme E2 V1 involved_in TAS (PMID:10089880) PINC PMID:10089880 NCBI chr20:50,081,124...50,115,957
Ensembl chr20:50,081,124...50,115,959 		JBrowse link
G UBE2V2 ubiquitin conjugating enzyme E2 V2 involved_in TAS (PMID:10089880) PINC PMID:10089880 NCBI chr 8:47,997,437...48,064,708
Ensembl chr 8:48,008,415...48,064,708 		JBrowse link
G UCHL5 ubiquitin C-terminal hydrolase L5 involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr 1:193,012,254...193,060,076
Ensembl chr 1:193,012,250...193,060,080 		JBrowse link
G UIMC1 ubiquitin interaction motif containing 1 involved_in NAS (PMID:20656689) ComplexPortal PMID:20656689 NCBI chr 5:176,905,005...177,022,602
Ensembl chr 5:176,905,005...177,022,633 		JBrowse link
G USP1 ubiquitin specific peptidase 1 involved_in IDA
IEA		 (PMID:18082604) UniProt
InterPro		 PMID:18082604 GO_REF:0000002 NCBI chr 1:62,436,395...62,451,804
Ensembl chr 1:62,436,297...62,451,804 		JBrowse link
G USP22 ubiquitin specific peptidase 22 involved_in NAS (PMID:11406595), (PMID:11564863) ComplexPortal PMID:11406595 PMID:11564863 NCBI chr17:20,999,596...21,043,419
Ensembl chr17:20,999,596...21,043,760 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA
ISO		 Ensembl
ComplexPortal		 GO_REF:0000107 GO_REF:0000114 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902 		JBrowse link
G ACTL6A actin like 6A involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ATR ATR serine/threonine kinase involved_in NAS (PMID:11721054) ComplexPortal PMID:11721054 NCBI chr 3:142,449,235...142,578,733
Ensembl chr 3:142,449,007...142,578,733 		JBrowse link
G ATRIP ATR interacting protein involved_in NAS (PMID:11721054) ComplexPortal PMID:11721054 NCBI chr 3:48,446,737...48,467,645
Ensembl chr 3:48,446,710...48,467,645 		JBrowse link
G BRD8 bromodomain containing 8 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 5:138,139,770...138,178,630
Ensembl chr 5:138,139,770...138,178,953 		JBrowse link
G DEK DEK proto-oncogene acts_upstream_of_or_within
involved_in		 IMP
IEA
IBA		 (PMID:21653549) MGI
TreeGrafter
GO_Central		 PMID:21653549 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:18,223,860...18,264,530
Ensembl chr 6:18,223,860...18,264,548 		JBrowse link
G DMAP1 DNA methyltransferase 1 associated protein 1 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 1:44,213,471...44,220,673
Ensembl chr 1:44,213,455...44,220,681 		JBrowse link
G EP400 E1A binding protein p400 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr12:131,949,942...132,080,460
Ensembl chr12:131,949,942...132,080,460 		JBrowse link
G EPC1 enhancer of polycomb homolog 1 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr10:32,267,751...32,378,769
Ensembl chr10:32,267,751...32,378,798 		JBrowse link
G EPC2 enhancer of polycomb homolog 2 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 2:148,644,751...148,787,569
Ensembl chr 2:148,644,440...148,787,569 		JBrowse link
G ING3 inhibitor of growth family member 3 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 7:120,950,777...120,977,216
Ensembl chr 7:120,950,763...120,977,216 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G MBTD1 mbt domain containing 1 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr17:51,177,425...51,260,958
Ensembl chr17:51,177,425...51,260,163 		JBrowse link
G MEAF6 MYST/Esa1 associated factor 6 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 1:37,489,993...37,514,766
Ensembl chr 1:37,489,993...37,514,766 		JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr15:78,872,890...78,898,139
Ensembl chr15:78,810,487...78,898,139 		JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr  X:103,675,498...103,688,047
Ensembl chr  X:103,675,496...103,688,158 		JBrowse link
G MRGBP MRG domain binding protein involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr20:62,796,473...62,801,729
Ensembl chr20:62,796,473...62,801,729 		JBrowse link
G PML PML nuclear body scaffold involved_in IMP (PMID:21639834) UniProt PMID:21639834 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IMP (PMID:18614045) ComplexPortal PMID:18614045 NCBI chr16:30,075,994...30,085,376
Ensembl chr16:30,075,978...30,085,376 		JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IMP (PMID:18614045) ComplexPortal PMID:18614045 NCBI chr 3:72,996,743...73,069,198
Ensembl chr 3:72,996,803...73,069,198 		JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B involved_in IMP (PMID:18614045) ComplexPortal PMID:18614045 NCBI chr 2:55,547,292...55,617,622
Ensembl chr 2:55,547,292...55,618,880 		JBrowse link
G RUVBL1 RuvB like AAA ATPase 1 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 3:128,064,785...128,153,914
Ensembl chr 3:128,064,778...128,153,914 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr19:48,993,448...49,015,995
Ensembl chr19:48,993,562...49,015,970 		JBrowse link
G TRRAP transformation/transcription domain associated protein involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 7:98,878,532...99,013,241
Ensembl chr 7:98,877,933...99,050,831 		JBrowse link
G VPS72 vacuolar protein sorting 72 homolog involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr 1:151,176,304...151,190,197
Ensembl chr 1:151,176,304...151,195,321 		JBrowse link
G YEATS4 YEATS domain containing 4 involved_in NAS (PMID:14966270) ComplexPortal PMID:14966270 NCBI chr12:69,359,743...69,427,072
Ensembl chr12:69,359,710...69,390,870 		JBrowse link
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 involved_in IDA (PMID:15665856) UniProt PMID:15665856 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in IDA (PMID:23754376) UniProt PMID:23754376 NCBI chr 7:50,444,133...50,450,350
Ensembl chr 7:50,444,128...50,450,390 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within IMP (PMID:24217620) MGI PMID:24217620 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G PPP4C protein phosphatase 4 catalytic subunit involved_in IMP (PMID:20154705) UniProt PMID:20154705 NCBI chr16:30,075,994...30,085,376
Ensembl chr16:30,075,978...30,085,376 		JBrowse link
G PPP4R2 protein phosphatase 4 regulatory subunit 2 involved_in IMP (PMID:20154705) UniProt PMID:20154705 NCBI chr 3:72,996,743...73,069,198
Ensembl chr 3:72,996,803...73,069,198 		JBrowse link
G RAD51 RAD51 recombinase involved_in IDA (PMID:23754376) UniProt PMID:23754376 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IDA (PMID:23754376) UniProt PMID:23754376 NCBI chr12:4,538,890...4,560,047
Ensembl chr12:4,538,798...4,560,047 		JBrowse link
G RPA2 replication protein A2 involved_in IMP (PMID:20154705) UniProt PMID:20154705 NCBI chr 1:27,891,524...27,914,797
Ensembl chr 1:27,891,524...27,914,746 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in IEA
IBA
IMP		 (PMID:18957201) UniProt
TreeGrafter
GO_Central		 PMID:18957201 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253 		JBrowse link
G RTEL1-TNFRSF6B RTEL1-TNFRSF6B readthrough (NMD candidate) involved_in IEA UniProt GO_REF:0000104 NCBI chr20:63,657,810...63,698,698
Ensembl chr20:63,659,300...63,698,684 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IDA (PMID:24843002) UniProt PMID:24843002 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
G SIRT6 sirtuin 6 involved_in IDA (PMID:19135889), (PMID:22753495) UniProt PMID:19135889 PMID:22753495 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IDA (PMID:23754376) UniProt PMID:23754376 NCBI chr 8:47,260,878...47,736,306
Ensembl chr 8:47,260,878...47,736,306 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in ISO (MGI:4440768|PMID:20339076) UniProt PMID:20339076 MGI:4440768 NCBI chr16:75,760,050...75,914,672
Ensembl chr16:75,647,773...75,761,872 		JBrowse link
G TERF2IP TERF2 interacting protein involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr16:75,647,773...75,657,432
Ensembl chr16:75,647,773...75,761,872 		JBrowse link
G TEX15 testis expressed 15, meiosis and synapsis associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18283110) InterPro
MGI
GO_Central
TreeGrafter		 PMID:18283110 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:30,831,544...30,913,008
Ensembl chr 8:30,831,544...30,913,008 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in IMP (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:55,484,616...55,489,848
Ensembl chr  X:55,484,616...55,489,848 		JBrowse link
G ZNF365 zinc finger protein 365 involved_in IMP
IBA		 (PMID:23966166) UniProt
GO_Central		 PMID:23966166 GO_REF:0000033 NCBI chr10:62,374,369...62,480,285
Ensembl chr10:62,374,192...62,480,288 		JBrowse link
regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR2 actin related protein 2 NOT|involved_in IDA (PMID:29925947) UniProt PMID:29925947 NCBI chr 2:65,227,831...65,271,253
Ensembl chr 2:65,227,788...65,271,253 		JBrowse link
G DEK DEK proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21653549) Ensembl
MGI		 PMID:21653549 GO_REF:0000107 NCBI chr 6:18,223,860...18,264,530
Ensembl chr 6:18,223,860...18,264,548 		JBrowse link
G MRNIP MRN complex interacting protein involved_in IMP (PMID:27568553) UniProt PMID:27568553 NCBI chr 5:179,837,276...179,858,817
Ensembl chr 5:179,835,133...179,862,173 		JBrowse link
G NSD2 nuclear receptor binding SET domain protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23241889) Ensembl
MGI		 PMID:23241889 GO_REF:0000107 NCBI chr 4:1,871,393...1,982,192
Ensembl chr 4:1,871,393...1,982,207 		JBrowse link
G POT1 protection of telomeres 1 involved_in IDA (PMID:29227966) CACAO PMID:29227966 NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G USP51 ubiquitin specific peptidase 51 involved_in IMP (PMID:27083998) UniProt PMID:27083998 NCBI chr  X:55,484,616...55,489,848
Ensembl chr  X:55,484,616...55,489,848 		JBrowse link
G WAS WASP actin nucleation promoting factor NOT|involved_in IDA (PMID:29925947) UniProt PMID:29925947 NCBI chr  X:48,676,636...48,691,427
Ensembl chr  X:48,676,596...48,691,431 		JBrowse link
regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20673990) Ensembl
MGI		 PMID:20673990 GO_REF:0000107 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in IMP (PMID:11017067) BHF-UCL PMID:11017067 NCBI chr17:65,528,563...65,561,648
Ensembl chr17:65,528,563...65,561,648 		JBrowse link
regulation of nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902 		JBrowse link
G ACTL6A actin like 6A involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ACTL6B actin like 6B involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 7:100,643,097...100,656,448
Ensembl chr 7:100,643,097...100,656,448 		JBrowse link
G ARID1A AT-rich interaction domain 1A involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104 		JBrowse link
G ARID1B AT-rich interaction domain 1B involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 6:156,776,026...157,210,779
Ensembl chr 6:156,776,020...157,210,779 		JBrowse link
G ARID2 AT-rich interaction domain 2 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr12:45,729,706...45,908,037
Ensembl chr12:45,729,706...45,908,040 		JBrowse link
G BCL7A BAF chromatin remodeling complex subunit BCL7A involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr12:122,021,884...122,062,044
Ensembl chr12:122,019,422...122,062,044 		JBrowse link
G BCL7B BAF chromatin remodeling complex subunit BCL7B involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 7:73,536,356...73,557,690
Ensembl chr 7:73,536,356...73,557,690 		JBrowse link
G BCL7C BAF chromatin remodeling complex subunit BCL7C involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr16:30,833,626...30,894,077
Ensembl chr16:30,833,626...30,894,302 		JBrowse link
G BRD7 bromodomain containing 7 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988 		JBrowse link
G CUL4A cullin 4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19481525) Ensembl
MGI		 PMID:19481525 GO_REF:0000107 NCBI chr13:113,208,193...113,267,108
Ensembl chr13:113,208,193...113,267,108 		JBrowse link
G DPF1 double PHD fingers 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr19:38,211,006...38,229,695
Ensembl chr19:38,211,006...38,229,714 		JBrowse link
G DPF2 double PHD fingers 2 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr11:65,333,852...65,354,262
Ensembl chr11:65,333,843...65,354,262 		JBrowse link
G DPF3 double PHD fingers 3 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr14:72,609,034...72,894,101
Ensembl chr14:72,609,034...72,894,101 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) UniProt PMID:18650382 MGI:3807115 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597 		JBrowse link
G KAT7 lysine acetyltransferase 7 involved_in IDA (PMID:28719581) UniProt PMID:28719581 NCBI chr17:49,788,681...49,835,026
Ensembl chr17:49,788,624...49,835,026 		JBrowse link
G PBRM1 polybromo 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 3:52,545,367...52,685,913
Ensembl chr 3:52,545,352...52,685,917 		JBrowse link
G PHF10 PHD finger protein 10 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 6:169,703,902...169,724,500
Ensembl chr 6:169,703,902...169,725,566 		JBrowse link
G RAD52 RAD52 homolog, DNA repair protein acts_upstream_of_or_within IDA (PMID:19506022) MGI PMID:19506022 NCBI chr12:911,736...991,122
Ensembl chr12:911,736...990,053 		JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 9:2,015,347...2,193,624
Ensembl chr 9:1,980,290...2,193,624 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009 		JBrowse link
G SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 3:47,585,269...47,781,893
Ensembl chr 3:47,585,269...47,782,106 		JBrowse link
G SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr12:56,162,359...56,189,483
Ensembl chr12:56,162,359...56,189,567 		JBrowse link
G SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr12:50,085,342...50,100,707
Ensembl chr12:50,085,200...50,100,707 		JBrowse link
G SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr17:63,832,081...63,842,685
Ensembl chr17:63,832,081...63,843,065 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr 7:151,238,780...151,277,149
Ensembl chr 7:151,238,764...151,277,896 		JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in NAS (PMID:12215535) ComplexPortal PMID:12215535 NCBI chr17:40,624,962...40,647,818
Ensembl chr17:40,624,962...40,648,654 		JBrowse link
regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARP1 poly(ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (PMID:25378300) MGI PMID:25378300 NCBI chr 1:226,360,691...226,408,093
Ensembl chr 1:226,360,210...226,408,154 		JBrowse link
regulation of transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IMP (PMID:16916636), (PMID:17297471) UniProt PMID:16916636 PMID:17297471 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
replication-born double-strand break repair via sister chromatid exchange term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLM BLM RecQ like helicase acts_upstream_of_or_within ISO (PMID:25597246) MGI PMID:25597246 NCBI chr15:90,717,346...90,816,166
Ensembl chr15:90,717,346...90,816,166 		JBrowse link
G FANCB FA complementation group B involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:25520194) GO_Central
MGI		 PMID:25520194 GO_REF:0000033 NCBI chr  X:14,689,524...14,873,069
Ensembl chr  X:14,690,388...14,873,255 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413 		JBrowse link
G RAD21 RAD21 cohesin complex component involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776 		JBrowse link
G RAD21L1 RAD21 cohesin complex component like 1 involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:1,226,044...1,255,876
Ensembl chr20:1,226,044...1,296,421 		JBrowse link
G RAD51 RAD51 recombinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22778135) Ensembl
MGI		 PMID:22778135 GO_REF:0000107 NCBI chr15:40,694,733...40,732,340
Ensembl chr15:40,694,774...40,732,340 		JBrowse link
G RECQL5 RecQ like helicase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25520194) Ensembl
MGI		 PMID:25520194 GO_REF:0000107 NCBI chr17:75,626,854...75,667,154
Ensembl chr17:75,626,845...75,667,189 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IMP (PMID:28002403) UniProt PMID:28002403 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
signal transduction in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA (PMID:15657060), (PMID:18280240), (PMID:9037071) UniProt PMID:9037071 PMID:15657060 PMID:18280240 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ATAD5 ATPase family AAA domain containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15983387) Ensembl
MGI		 PMID:15983387 GO_REF:0000107 NCBI chr17:30,831,966...30,895,869
Ensembl chr17:30,831,966...30,895,869 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IDA
IMP		 (PMID:26774286)
(PMID:27664052)		 UniProt PMID:26774286 PMID:27664052 NCBI chr11:108,223,067...108,369,102
Ensembl chr11:108,222,823...108,369,102 		JBrowse link
G BID BH3 interacting domain death agonist involved_in TAS (PMID:18309324) UniProt PMID:18309324 NCBI chr22:17,734,138...17,774,665
Ensembl chr22:17,734,138...17,774,770 		JBrowse link
G CASP9 caspase 9 involved_in IDA (PMID:15657060) UniProt PMID:15657060 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534 		JBrowse link
G CEP63 centrosomal protein 63 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:134,485,724...134,782,559
Ensembl chr 3:134,485,699...134,587,789 		JBrowse link
G CHEK1 checkpoint kinase 1 involved_in ISO
IEA
IDA		 (PMID:16963448) RGD
Ensembl
UniProt		 PMID:11278490 PMID:16963448 GO_REF:0000107 RGD:2316109 NCBI chr11:125,625,136...125,681,124
Ensembl chr11:125,625,163...125,676,255 		JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in		 IDA
IMP
IEA		 (PMID:14744935)
(PMID:11298456)		 MGI
UniProt
Ensembl		 PMID:11298456 PMID:14744935 GO_REF:0000107 NCBI chr22:28,687,743...28,741,834
Ensembl chr22:28,687,743...28,742,422 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:106,991,364...107,093,549
Ensembl chr12:106,991,364...107,093,549 		JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IMP (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr 1:67,685,201...67,688,334
Ensembl chr 1:67,685,201...67,688,334 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in IMP (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr17:75,318,076...75,405,678
Ensembl chr17:75,318,076...75,405,709 		JBrowse link
G MAP2K6 mitogen-activated protein kinase kinase 6 involved_in TAS (PMID:10848581) PINC PMID:10848581 NCBI chr17:69,414,697...69,553,865
Ensembl chr17:69,414,697...69,553,865 		JBrowse link
G MAPK12 mitogen-activated protein kinase 12 involved_in TAS (PMID:10848581) PINC PMID:10848581 NCBI chr22:50,252,901...50,261,683
Ensembl chr22:50,245,450...50,261,716 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IMP (PMID:20160708) BHF-UCL PMID:20160708 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in IDA (PMID:17560175) UniProt PMID:17560175 NCBI chr16:30,114,105...30,123,220
Ensembl chr16:30,114,105...30,123,506 		JBrowse link
G RNF8 ring finger protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G WNT1 Wnt family member 1 involved_in IDA (PMID:16501043) BHF-UCL PMID:16501043 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620 		JBrowse link
single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor involved_in IMP (PMID:17396150) UniProt PMID:17396150 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G APTX aprataxin involved_in IEA
IBA
IMP
IDA		 (PMID:15044383)
(PMID:14755728), (PMID:17519253)		 Ensembl
GO_Central
TreeGrafter
UniProt		 PMID:14755728 PMID:15044383 PMID:17519253 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:32,972,616...33,025,120
Ensembl chr 9:32,886,601...33,025,130 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IDA (PMID:29545921) UniProt PMID:29545921 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G L34079.1 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr19:43,554,692...43,593,036 JBrowse link
G LIG4 DNA ligase 4 involved_in IDA (PMID:8798671) UniProt PMID:8798671 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:20097625) UniProt PMID:20097625 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G TDP1 tyrosyl-DNA phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IMP
ISO
IDA		 (PMID:17600775)
(PMID:17914460), (PMID:17948061)
(PMID:15811850)		 UniProt
MGI		 PMID:15811850 PMID:17600775 PMID:17914460 PMID:17948061 NCBI chr14:89,954,968...90,044,764
Ensembl chr14:89,954,939...90,044,764 		JBrowse link
G TNP1 transition protein 1 involved_in IDA (PMID:12743712) UniProt PMID:12743712 NCBI chr 2:216,859,458...216,860,064
Ensembl chr 2:216,859,458...216,860,064 		JBrowse link
G XNDC1N XRCC1 N-terminal domain containing 1, N-terminal like involved_in IEA InterPro GO_REF:0000002 NCBI chr11:71,865,509...71,928,594
Ensembl chr11:71,865,504...71,928,654 		JBrowse link
G XNDC1N-ZNF705EP-ALG1L9P XNDC1N-ZNF705EP-ALG1L9P readthrough involved_in IEA InterPro GO_REF:0000002 NCBI chr11:71,804,981...71,928,594
Ensembl chr11:71,804,997...71,928,656 		JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:43,543,311...43,575,527
Ensembl chr19:43,543,311...43,580,473 		JBrowse link
telomere maintenance in response to DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK2 cyclin dependent kinase 2 involved_in IDA (PMID:28216226) UniProt PMID:28216226 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G NBN nibrin involved_in IEA
IDA		 (PMID:28216226) Ensembl
UniProt		 PMID:28216226 GO_REF:0000107 NCBI chr 8:89,933,331...89,984,667
Ensembl chr 8:89,924,515...90,003,228 		JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IDA (PMID:28216226) UniProt PMID:28216226 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183 		JBrowse link
G RIF1 replication timing regulatory factor 1 involved_in IDA (PMID:15583028) BHF-UCL PMID:15583028 NCBI chr 2:151,409,902...151,534,435
Ensembl chr 2:151,409,883...151,508,013 		JBrowse link
G RTEL1 regulator of telomere elongation helicase 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253 		JBrowse link
G SHLD1 shieldin complex subunit 1 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr20:5,750,193...5,864,395
Ensembl chr20:5,750,393...5,864,395 		JBrowse link
G SHLD2 shieldin complex subunit 2 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr10:87,094,473...87,191,465
Ensembl chr10:87,094,161...87,191,465 		JBrowse link
G SHLD3 shieldin complex subunit 3 involved_in NAS (PMID:29656893) ComplexPortal PMID:29656893 NCBI chr 5:65,625,027...65,630,928
Ensembl chr 5:65,625,027...65,630,928 		JBrowse link
telomere maintenance via base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IDA (PMID:24703901) BHF-UCL PMID:24703901 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772 		JBrowse link
transcription-coupled nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in TAS
IDA		 (PMID:8663148) Reactome
UniProt		 PMID:8663148 Reactome:R-HSA-6781827 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERCC3 ERCC excision repair 3, TFIIH core complex helicase subunit involved_in IDA
TAS		 (PMID:8663148) UniProt
Reactome		 PMID:8663148 Reactome:R-HSA-6781827 NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166 		JBrowse link
G ERCC5 ERCC excision repair 5, endonuclease involved_in TAS
IMP		 (PMID:16246722) Reactome
UniProt		 PMID:16246722 Reactome:R-HSA-6781827 NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA
IMP		 (PMID:12509265), (PMID:9150142)
(PMID:10564257), (PMID:26620705)		 RGD
MGI
GO_Central
TreeGrafter
UniProt
Ensembl		 PMID:9150142 PMID:10564257 PMID:12509265 PMID:26620705 PMID:31644904 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 RGD:126925983 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in
acts_upstream_of_or_within		 IEA
IBA
IDA		 (PMID:12732143) InterPro
GO_Central
TreeGrafter
MGI		 PMID:12732143 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12660172) Ensembl
MGI		 PMID:12660172 GO_REF:0000107 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647 		JBrowse link
G POLR2I RNA polymerase II subunit I involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:36,113,709...36,114,875
Ensembl chr19:36,113,709...36,115,213 		JBrowse link
G RAD54B RAD54 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:94,371,960...94,475,115
Ensembl chr 8:94,371,960...94,475,115 		JBrowse link
G RAD54L RAD54 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:46,247,688...46,278,473
Ensembl chr 1:46,246,461...46,278,480 		JBrowse link
G USP7 ubiquitin specific peptidase 7 involved_in IMP (PMID:22466612) UniProt PMID:22466612 NCBI chr16:8,892,097...8,963,906
Ensembl chr16:8,892,097...8,975,328 		JBrowse link
G UVSSA UV stimulated scaffold protein A involved_in IMP
IEA
IBA		 (PMID:22466610), (PMID:22466611), (PMID:22466612) UniProt
TreeGrafter
GO_Central		 PMID:22466610 PMID:22466611 PMID:22466612 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:1,342,011...1,395,989
Ensembl chr 4:1,345,691...1,395,989 		JBrowse link
G XAB2 XPA binding protein 2 involved_in IDA (PMID:10944529) UniProt PMID:10944529 NCBI chr19:7,619,525...7,629,545
Ensembl chr19:7,619,525...7,629,545 		JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTL denticleless E3 ubiquitin protein ligase homolog involved_in IDA (PMID:20129063) UniProt PMID:20129063 NCBI chr 1:212,035,748...212,105,013
Ensembl chr 1:212,035,553...212,107,400 		JBrowse link
G FAAP20 FA core complex associated protein 20 involved_in IMP (PMID:22266823) UniProt PMID:22266823 NCBI chr 1:2,184,477...2,212,720
Ensembl chr 1:2,184,461...2,212,720 		JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in IDA (PMID:24695737) UniProt PMID:24695737 NCBI chr 8:143,977,158...144,012,764
Ensembl chr 8:143,977,153...144,012,772 		JBrowse link
G PCLAF PCNA clamp associated factor involved_in IMP
IBA		 (PMID:23000965) UniProt
GO_Central		 PMID:23000965 GO_REF:0000033 NCBI chr15:64,364,304...64,387,687
Ensembl chr15:64,364,304...64,387,687 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in IDA
IBA
IEA		 (PMID:20129063) UniProt
GO_Central
TreeGrafter		 PMID:20129063 GO_REF:0000033 GO_REF:0000118 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626 		JBrowse link
G POLI DNA polymerase iota involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17114294) TreeGrafter
MGI
GO_Central		 PMID:17114294 GO_REF:0000033 GO_REF:0000118 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,517...54,321,266 		JBrowse link
G POLN DNA polymerase nu involved_in IMP
IDA		 (PMID:19908865)
(PMID:20102227)		 UniProt PMID:19908865 PMID:20102227 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G PRIMPOL primase and DNA directed polymerase involved_in IMP
IBA		 (PMID:24240614), (PMID:24267451) UniProt
GO_Central		 PMID:24240614 PMID:24267451 GO_REF:0000033 NCBI chr 4:184,649,738...184,694,952
Ensembl chr 4:184,649,667...184,694,963 		JBrowse link
G REV3L REV3 like, DNA directed polymerase zeta catalytic subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:111,299,033...111,483,711
Ensembl chr 6:111,299,028...111,483,715 		JBrowse link
G SPRTN SprT-like N-terminal domain involved_in IMP
IDA		 (PMID:23042605), (PMID:23042607)
(PMID:22681887), (PMID:22902628)		 UniProt PMID:22681887 PMID:22902628 PMID:23042605 PMID:23042607 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in TAS Reactome Reactome:R-HSA-110313 NCBI chr16:84,700,000...84,779,922
Ensembl chr16:84,699,986...84,779,922 		JBrowse link
G USP43 ubiquitin specific peptidase 43 involved_in TAS Reactome Reactome:R-HSA-110313 NCBI chr17:9,645,260...9,729,687
Ensembl chr17:9,644,698...9,729,687 		JBrowse link
G VCP valosin containing protein involved_in IMP (PMID:23042605) UniProt PMID:23042605 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,053,928...35,072,668 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IMP (PMID:24657165) UniProt PMID:24657165 NCBI chr14:64,503,716...64,533,693
Ensembl chr14:64,503,712...64,533,690 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 involved_in IMP (PMID:20855601) UniProt PMID:20855601 NCBI chr20:38,748,460...38,772,520
Ensembl chr20:38,748,460...38,772,520 		JBrowse link
G CUL4B cullin 4B involved_in IDA (PMID:22334663) UniProt PMID:22334663 NCBI chr  X:120,523,858...120,575,532
Ensembl chr  X:120,505,920...120,604,074 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IDA (PMID:14751237), (PMID:22334663) UniProt PMID:14751237 PMID:22334663 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IDA (PMID:14751237), (PMID:22334663) ComplexPortal PMID:14751237 PMID:22334663 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G H2AC25 H2A clustered histone 25 involved_in IMP (PMID:22334663) UniProt PMID:22334663 NCBI chr 1:228,457,364...228,457,873
Ensembl chr 1:228,434,777...228,457,873 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IMP (PMID:20855601) UniProt PMID:20855601 NCBI chr15:40,978,880...41,116,280
Ensembl chr15:40,978,880...41,116,280 		JBrowse link
G MC1R melanocortin 1 receptor involved_in IDA (PMID:18292087) BHF-UCL PMID:18292087 NCBI chr16:89,918,862...89,920,972
Ensembl chr16:89,912,119...89,920,973 		JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:20670893) CACAO PMID:20670893 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:97,654,398...97,697,340
Ensembl chr 9:97,674,909...97,697,340 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IDA
IEA		 (PMID:8077226) CACAO
Ensembl		 PMID:8077226 GO_REF:0000107 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    response to stimulus 10179
      response to stress 4595
        cellular response to stress 2149
          DNA damage response 964
            DNA repair + 647
            DNA repair-dependent chromatin remodeling 23
            SOS response 0
            broken chromosome clustering 2
            intrinsic apoptotic signaling pathway in response to DNA damage + 116
            signal transduction in response to DNA damage + 205
            telomere maintenance in response to DNA damage + 35
paths to the root