GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x3 |
copy number gain |
See cases [RCV000133911] |
ChrX:10701..156003242 [GRCh38] ChrX:60701..155232907 [GRCh37] ChrX:701..154886101 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|likely pathogenic|conflicting data from submitters |
NM_015884.4(MBTPS2):c.1523A>G (p.Asn508Ser) |
single nucleotide variant |
Keratosis follicularis spinulosa decalvans, X-linked [RCV000022848]|not provided [RCV000254794] |
ChrX:21882618 [GRCh38] ChrX:21900736 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.680A>T (p.His227Leu) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000012155] |
ChrX:21868476 [GRCh38] ChrX:21886594 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.261G>A (p.Met87Ile) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000012156] |
ChrX:21845207 [GRCh38] ChrX:21863325 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.1286G>A (p.Arg429His) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000012157]|not provided [RCV000081781] |
ChrX:21880921 [GRCh38] ChrX:21899039 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.1424T>C (p.Phe475Ser) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000012158] |
ChrX:21882519 [GRCh38] ChrX:21900637 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.677G>T (p.Trp226Leu) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000012159] |
ChrX:21868473 [GRCh38] ChrX:21886591 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.671-9T>G |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000114758] |
ChrX:21868458 [GRCh38] ChrX:21886576 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.1391T>C (p.Phe464Ser) |
single nucleotide variant |
Olmsted syndrome, X-linked [RCV000114759] |
ChrX:21882486 [GRCh38] ChrX:21900604 [GRCh37] ChrX:Xp22.12 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:3092486-155699618)x2 |
copy number gain |
See cases [RCV000050889] |
ChrX:3092486..155699618 [GRCh38] ChrX:3010527..154929279 [GRCh37] ChrX:3020527..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x3 |
copy number gain |
See cases [RCV000050810] |
ChrX:20140..155699618 [GRCh38] ChrX:70140..154929279 [GRCh37] ChrX:10140..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x1 |
copy number loss |
See cases [RCV000050811] |
ChrX:20140..155699618 [GRCh38] ChrX:70140..154929279 [GRCh37] ChrX:10140..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 |
copy number gain |
Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|See cases [RCV000050385] |
ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 |
copy number loss |
Global developmental delay [RCV000050386]|See cases [RCV000050386] |
ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3 |
copy number gain |
See cases [RCV000050697] |
ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1 |
copy number loss |
See cases [RCV000050699] |
ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.33-11.22(chrX:10679-52809182)x1 |
copy number loss |
See cases [RCV000051026] |
ChrX:10679..52809182 [GRCh38] ChrX:60679..52838206 [GRCh37] ChrX:679..52854931 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2790845-155699618)x3 |
copy number gain |
See cases [RCV000052359] |
ChrX:2790845..155699618 [GRCh38] ChrX:2708886..154929279 [GRCh37] ChrX:2718886..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:237659-156022362)x3 |
copy number gain |
Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052327]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052327]|See cases [RCV000052327] |
ChrX:237659..156022362 [GRCh38] ChrX:154326..155252027 [GRCh37] ChrX:94326..154905221 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:27245-155996431)x3 |
copy number gain |
See cases [RCV000052324] |
ChrX:27245..155996431 [GRCh38] ChrX:77245..155226096 [GRCh37] ChrX:17245..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.3(chrX:675360-46016699)x3 |
copy number gain |
See cases [RCV000052328] |
ChrX:675360..46016699 [GRCh38] ChrX:636095..45876134 [GRCh37] ChrX:556095..45761078 [NCBI36] ChrX:Xp22.33-11.3 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:40704-156022362)x3 |
copy number gain |
See cases [RCV000052325] |
ChrX:40704..156022362 [GRCh38] ChrX:90704..155252027 [GRCh37] ChrX:30704..154905221 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26101-155999293)x3 |
copy number gain |
See cases [RCV000052322] |
ChrX:26101..155999293 [GRCh38] ChrX:76101..155228958 [GRCh37] ChrX:16101..154882152 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1 |
copy number loss |
Global developmental delay [RCV000052986]|Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052987]|Intellectual functioning disability [RCV000052988]|Global developmental delay [RCV000052989]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052987]|See cases [RCV000052986] |
ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q22.1(chrX:675360-100368517)x1 |
copy number loss |
See cases [RCV000053005] |
ChrX:675360..100368517 [GRCh38] ChrX:636095..99623515 [GRCh37] ChrX:556095..99510171 [NCBI36] ChrX:Xp22.33-q22.1 |
pathogenic |
GRCh38/hg38 Xp22.33-11.23(chrX:10679-48344725)x1 |
copy number loss |
See cases [RCV000052981] |
ChrX:10679..48344725 [GRCh38] ChrX:60679..48204160 [GRCh37] ChrX:679..48089104 [NCBI36] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:2769041-58055036)x1 |
copy number loss |
See cases [RCV000053007] |
ChrX:2769041..58055036 [GRCh38] ChrX:2687082..58081470 [GRCh37] ChrX:2697082..58098195 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1 |
copy number loss |
Hypoplastic left heart [RCV000052982]|See cases [RCV000052982] |
ChrX:14245..155999293 [GRCh38] ChrX:64245..155228958 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:26102-57302794)x1 |
copy number loss |
See cases [RCV000052990] |
ChrX:26102..57302794 [GRCh38] ChrX:76102..57329227 [GRCh37] ChrX:16102..57345952 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-22.11(chrX:253129-23023165)x1 |
copy number loss |
See cases [RCV000052993] |
ChrX:253129..23023165 [GRCh38] ChrX:169796..23041282 [GRCh37] ChrX:109796..22951203 [NCBI36] ChrX:Xp22.33-22.11 |
pathogenic |
GRCh38/hg38 Xp22.33-11.1(chrX:253129-58271563)x1 |
copy number loss |
See cases [RCV000052994] |
ChrX:253129..58271563 [GRCh38] ChrX:169796..58297997 [GRCh37] ChrX:109796..58314722 [NCBI36] ChrX:Xp22.33-11.1 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:10679-55550898)x1 |
copy number loss |
Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052971]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052971]|See cases [RCV000052971] |
ChrX:10679..55550898 [GRCh38] ChrX:60679..55577331 [GRCh37] ChrX:679..55594056 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3 |
copy number gain |
Global developmental delay [RCV000052984]|Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052985]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052985]|See cases [RCV000052984] |
ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10479-54179172)x3 |
copy number gain |
See cases [RCV000053817] |
ChrX:10479..54179172 [GRCh38] ChrX:60479..53957191 [GRCh37] ChrX:479..54222330 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
NM_015884.4(MBTPS2):c.1468A>G (p.Lys490Glu) |
single nucleotide variant |
not provided [RCV000081782] |
ChrX:21882563 [GRCh38] ChrX:21900681 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.222A>G (p.Gln74=) |
single nucleotide variant |
not provided [RCV001647060]|not specified [RCV000081783] |
ChrX:21843316 [GRCh38] ChrX:21861434 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.17TGG[2] (p.Val8_Val11del) |
microsatellite |
not provided [RCV000081784] |
ChrX:21839751..21839762 [GRCh38] ChrX:21857869..21857880 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.472A>G (p.Thr158Ala) |
single nucleotide variant |
not provided [RCV000081785] |
ChrX:21851542 [GRCh38] ChrX:21869660 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.706A>G (p.Ile236Val) |
single nucleotide variant |
not provided [RCV000081786] |
ChrX:21868502 [GRCh38] ChrX:21886620 [GRCh37] ChrX:Xp22.12 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022826)x4 |
copy number gain |
See cases [RCV000133654] |
ChrX:10679..156022826 [GRCh38] ChrX:60679..155252491 [GRCh37] ChrX:679..154905685 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:70297-58066465)x3 |
copy number gain |
See cases [RCV000239834] |
ChrX:70297..58066465 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10701-52857805)x1 |
copy number loss |
See cases [RCV000133817] |
ChrX:10701..52857805 [GRCh38] ChrX:60701..52886834 [GRCh37] ChrX:701..52903559 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-155978689)x1 |
copy number loss |
See cases [RCV000133792] |
ChrX:10701..155978689 [GRCh38] ChrX:60701..155208354 [GRCh37] ChrX:701..154861548 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 |
copy number gain |
See cases [RCV000050385] |
ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:679..154896026 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 |
copy number loss |
See cases [RCV000050386] |
ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:679..154896026 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1 |
copy number loss |
See cases [RCV000052986] |
ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:16102..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3 |
copy number gain |
See cases [RCV000052984] |
ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:16102..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1 |
copy number loss |
See cases [RCV000052982] |
ChrX:14245..155999293 [GRCh38] ChrX:64245..155228958 [GRCh37] ChrX:4245..154882152 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.23(chrX:10679-50059388)x1 |
copy number loss |
See cases [RCV000133745] |
ChrX:10679..50059388 [GRCh38] ChrX:60679..49824045 [GRCh37] ChrX:679..49710785 [NCBI36] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20297-155999253)x3 |
copy number gain |
See cases [RCV000134564] |
ChrX:20297..155999253 [GRCh38] ChrX:70297..155228918 [GRCh37] ChrX:10297..154882112 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q11.1(chrX:10701-62712219)x1 |
copy number loss |
See cases [RCV000134568] |
ChrX:10701..62712219 [GRCh38] ChrX:60701..61931689 [GRCh37] ChrX:701..61848414 [NCBI36] ChrX:Xp22.33-q11.1 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:10701-58055053)x1 |
copy number loss |
See cases [RCV000134026] |
ChrX:10701..58055053 [GRCh38] ChrX:60701..58081487 [GRCh37] ChrX:701..58098212 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x1 |
copy number loss |
See cases [RCV000133947] |
ChrX:10701..156003242 [GRCh38] ChrX:60701..155232907 [GRCh37] ChrX:701..154886101 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.31-11.22(chrX:8176030-53962833)x1 |
copy number loss |
See cases [RCV000135305] |
ChrX:8176030..53962833 [GRCh38] ChrX:8144071..53989266 [GRCh37] ChrX:8104071..54005991 [NCBI36] ChrX:Xp22.31-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20297-156026127)x1 |
copy number loss |
See cases [RCV000135321] |
ChrX:20297..156026127 [GRCh38] ChrX:70297..155255792 [GRCh37] ChrX:10297..154908986 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-21.1(chrX:233335-37292980)x1 |
copy number loss |
See cases [RCV000135299] |
ChrX:233335..37292980 [GRCh38] ChrX:150002..37152232 [GRCh37] ChrX:90002..37037153 [NCBI36] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh38/hg38 Xp22.2-22.11(chrX:15173626-23952585)x2 |
copy number gain |
See cases [RCV000134875] |
ChrX:15173626..23952585 [GRCh38] ChrX:15191748..23970702 [GRCh37] ChrX:15101669..23880623 [NCBI36] ChrX:Xp22.2-22.11 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10679-52857805)x3 |
copy number gain |
See cases [RCV000134957] |
ChrX:10679..52857805 [GRCh38] ChrX:60679..52886834 [GRCh37] ChrX:679..52903559 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-21.1(chrX:10679-36186635)x1 |
copy number loss |
See cases [RCV000135551] |
ChrX:10679..36186635 [GRCh38] ChrX:60679..36202463 [GRCh37] ChrX:679..36114673 [NCBI36] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x1 |
copy number loss |
See cases [RCV000136097] |
ChrX:10701..156003229 [GRCh38] ChrX:60701..155232894 [GRCh37] ChrX:701..154886088 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:40904-155998166)x1 |
copy number loss |
See cases [RCV000136478] |
ChrX:40904..155998166 [GRCh38] ChrX:90904..155227831 [GRCh37] ChrX:30904..154881025 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q25(chrX:10701-128393708) |
copy number loss |
See cases [RCV000136094] |
ChrX:10701..128393708 [GRCh38] ChrX:60701..127527686 [GRCh37] ChrX:701..127355367 [NCBI36] ChrX:Xp22.33-q25 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10001-156030895)x1 |
copy number loss |
See cases [RCV000136005] |
ChrX:10001..156030895 [GRCh38] ChrX:60001..155260560 [GRCh37] ChrX:1..154913754 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10679-52213731)x1 |
copy number loss |
See cases [RCV000137112] |
ChrX:10679..52213731 [GRCh38] ChrX:60679..51948998 [GRCh37] ChrX:679..51973598 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic|uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:2765636-155522304)x3 |
copy number gain |
See cases [RCV000136791] |
ChrX:2765636..155522304 [GRCh38] ChrX:2683677..154751965 [GRCh37] ChrX:2693677..154405159 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2782275-155611794)x2 |
copy number gain |
See cases [RCV000136841] |
ChrX:2782275..155611794 [GRCh38] ChrX:2700316..154785891 [GRCh37] ChrX:2710316..154494649 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10701-52033734)x1 |
copy number loss |
See cases [RCV000137430] |
ChrX:10701..52033734 [GRCh38] ChrX:60701..51776830 [GRCh37] ChrX:701..51793570 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:10701-58055036)x1 |
copy number loss |
See cases [RCV000137552] |
ChrX:10701..58055036 [GRCh38] ChrX:60701..58081470 [GRCh37] ChrX:701..58098195 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-11.23(chrX:10701-49071220)x1 |
copy number loss |
See cases [RCV000137413] |
ChrX:10701..49071220 [GRCh38] ChrX:60701..48928877 [GRCh37] ChrX:701..48815821 [NCBI36] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh38/hg38 Xp22.33-11.23(chrX:10679-49157514)x1 |
copy number loss |
See cases [RCV000137166] |
ChrX:10679..49157514 [GRCh38] ChrX:60679..49016667 [GRCh37] ChrX:679..48903611 [NCBI36] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh38/hg38 Xp22.33-q13.3(chrX:10679-76420505)x3 |
copy number gain |
See cases [RCV000137137] |
ChrX:10679..76420505 [GRCh38] ChrX:60679..75640898 [GRCh37] ChrX:679..75557302 [NCBI36] ChrX:Xp22.33-q13.3 |
pathogenic|likely benign |
GRCh38/hg38 Xp22.2-21.2(chrX:12254555-30410580)x1 |
copy number loss |
See cases [RCV000138069] |
ChrX:12254555..30410580 [GRCh38] ChrX:12272674..30428697 [GRCh37] ChrX:12182595..30338618 [NCBI36] ChrX:Xp22.2-21.2 |
pathogenic|likely pathogenic |
GRCh38/hg38 Xp22.33-21.1(chrX:10701-37723318)x1 |
copy number loss |
See cases [RCV000138019] |
ChrX:10701..37723318 [GRCh38] ChrX:60701..37318587 [GRCh37] ChrX:701..37467510 [NCBI36] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh38/hg38 Xp22.33-q22.3(chrX:10701-106113403)x1 |
copy number loss |
See cases [RCV000137886] |
ChrX:10701..106113403 [GRCh38] ChrX:60701..105357395 [GRCh37] ChrX:701..105244051 [NCBI36] ChrX:Xp22.33-q22.3 |
pathogenic |
GRCh38/hg38 Xp22.2-q27.3(chrX:13020141-143473520)x1 |
copy number loss |
See cases [RCV000138678] |
ChrX:13020141..143473520 [GRCh38] ChrX:13038260..142561303 [GRCh37] ChrX:12948181..142388969 [NCBI36] ChrX:Xp22.2-q27.3 |
pathogenic |
GRCh38/hg38 Xp22.33-11.1(chrX:10701-58517661)x1 |
copy number loss |
See cases [RCV000139343] |
ChrX:10701..58517661 [GRCh38] ChrX:60701..58544094 [GRCh37] ChrX:701..58560819 [NCBI36] ChrX:Xp22.33-11.1 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:1085618-155699644)x1 |
copy number loss |
See cases [RCV000139278] |
ChrX:1085618..155699644 [GRCh38] ChrX:1118268..154929305 [GRCh37] ChrX:1038268..154582499 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q21.31(chrX:10701-88318651)x1 |
copy number loss |
See cases [RCV000139352] |
ChrX:10701..88318651 [GRCh38] ChrX:60701..87573652 [GRCh37] ChrX:701..87460308 [NCBI36] ChrX:Xp22.33-q21.31 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004181)x3 |
copy number gain |
See cases [RCV000139888] |
ChrX:251880..156004181 [GRCh38] ChrX:168547..155233846 [GRCh37] ChrX:108547..154887040 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.4(chrX:3909315-38682287)x3 |
copy number gain |
See cases [RCV000141261] |
ChrX:3909315..38682287 [GRCh38] ChrX:3827356..38541541 [GRCh37] ChrX:3837356..38426485 [NCBI36] ChrX:Xp22.33-11.4 |
uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:2299223-155992188)x3 |
copy number gain |
See cases [RCV000141400] |
ChrX:2299223..155992188 [GRCh38] ChrX:2217264..155221853 [GRCh37] ChrX:2227264..154875047 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20297-156016920)x3 |
copy number gain |
See cases [RCV000141401] |
ChrX:20297..156016920 [GRCh38] ChrX:70297..155246585 [GRCh37] ChrX:10297..154899779 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x4 |
copy number gain |
See cases [RCV000140786] |
ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10701-53750424)x1 |
copy number loss |
See cases [RCV000140711] |
ChrX:10701..53750424 [GRCh38] ChrX:60701..53776922 [GRCh37] ChrX:701..53793647 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x1 |
copy number loss |
See cases [RCV000140787] |
ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic|conflicting data from submitters |
GRCh38/hg38 Xp22.33-11.22(chrX:251879-50289363)x1 |
copy number loss |
See cases [RCV000141741] |
ChrX:251879..50289363 [GRCh38] ChrX:168546..50032363 [GRCh37] ChrX:108546..50049103 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q12(chrX:251880-66445845)x1 |
copy number loss |
See cases [RCV000142334] |
ChrX:251880..66445845 [GRCh38] ChrX:168547..65665687 [GRCh37] ChrX:108547..65582412 [NCBI36] ChrX:Xp22.33-q12 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:251880-51643625)x1 |
copy number loss |
See cases [RCV000142035] |
ChrX:251880..51643625 [GRCh38] ChrX:168547..51386559 [GRCh37] ChrX:108547..51403299 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-q24(chrX:251879-118847157)x3 |
copy number gain |
See cases [RCV000142134] |
ChrX:251879..118847157 [GRCh38] ChrX:168546..117981120 [GRCh37] ChrX:108546..117865148 [NCBI36] ChrX:Xp22.33-q24 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x3 |
copy number gain |
See cases [RCV000142625] |
ChrX:10701..156003229 [GRCh38] ChrX:60701..155232894 [GRCh37] ChrX:701..154886088 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x1 |
copy number loss |
See cases [RCV000143441] |
ChrX:251879..156004066 [GRCh38] ChrX:168546..155233731 [GRCh37] ChrX:108546..154886925 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x3 |
copy number gain |
See cases [RCV000143433] |
ChrX:251879..156004066 [GRCh38] ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-11.22(chrX:10701-53131191)x1 |
copy number loss |
See cases [RCV000143348] |
ChrX:10701..53131191 [GRCh38] ChrX:60701..53047381 [GRCh37] ChrX:701..53177098 [NCBI36] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh38/hg38 Xp22.33-11.21(chrX:251879-56428859)x1 |
copy number loss |
See cases [RCV000143130] |
ChrX:251879..56428859 [GRCh38] ChrX:168546..56455292 [GRCh37] ChrX:108546..56472017 [NCBI36] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x3 |
copy number gain |
See cases [RCV000143219] |
ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:108547..154886925 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-21.1(chrX:251879-35885004)x1 |
copy number loss |
See cases [RCV000143496] |
ChrX:251879..35885004 [GRCh38] ChrX:168546..35903121 [GRCh37] ChrX:108546..35813042 [NCBI36] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3 |
copy number gain |
See cases [RCV000148141] |
ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1 |
copy number loss |
See cases [RCV000148135] |
ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155246643)x3 |
copy number gain |
See cases [RCV000240122] |
ChrX:71267..155246643 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.1013A>T (p.His338Leu) |
single nucleotide variant |
Abnormality of neuronal migration [RCV000201401] |
ChrX:21878084 [GRCh38] ChrX:21896202 [GRCh37] ChrX:Xp22.12 |
benign |
GRCh37/hg19 Xp22.33-q28(chrX:176426-155250222)x3 |
copy number gain |
See cases [RCV000239843] |
ChrX:176426..155250222 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:70297-58066465)x1 |
copy number loss |
See cases [RCV000239814] |
ChrX:70297..58066465 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155255839)x1 |
copy number loss |
See cases [RCV000239832] |
ChrX:71267..155255839 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.2-q28(chrX:13147668-155250222)x3 |
copy number gain |
See cases [RCV000239798] |
ChrX:13147668..155250222 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:150002-155234036)x2 |
copy number gain |
See cases [RCV000240106] |
ChrX:150002..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60701-155246271)x3 |
copy number gain |
See cases [RCV000239989] |
ChrX:60701..155246271 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155224766)x1 |
copy number loss |
See cases [RCV000239902] |
ChrX:71267..155224766 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155234036)x2 |
copy number gain |
See cases [RCV000239874] |
ChrX:71267..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:553069-155233731)x1 |
copy number loss |
See cases [RCV000446026] |
ChrX:553069..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255839)x3 |
copy number gain |
See cases [RCV000239934] |
ChrX:70297..155255839 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:176426-155236656)x3 |
copy number gain |
See cases [RCV000240552] |
ChrX:176426..155236656 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:225816-155234036)x2 |
copy number gain |
See cases [RCV000240464] |
ChrX:225816..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:150002-155234036)x3 |
copy number gain |
See cases [RCV000240314] |
ChrX:150002..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-21.1(chrX:71267-35809046)x1 |
copy number loss |
See cases [RCV000240335] |
ChrX:71267..35809046 [GRCh37] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh37/hg19 Xp22.33-21.3(chrX:1378591-25940311)x2 |
copy number gain |
See cases [RCV000240441] |
ChrX:1378591..25940311 [GRCh37] ChrX:Xp22.33-21.3 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:2707626-155250222)x2 |
copy number gain |
See cases [RCV000240541] |
ChrX:2707626..155250222 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.291G>A (p.Thr97=) |
single nucleotide variant |
not provided [RCV000487570] |
ChrX:21845237 [GRCh38] ChrX:21863355 [GRCh37] ChrX:Xp22.12 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_015884.4(MBTPS2):c.727C>T (p.Pro243Ser) |
single nucleotide variant |
not provided [RCV000335401] |
ChrX:21868523 [GRCh38] ChrX:21886641 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.739T>G (p.Leu247Val) |
single nucleotide variant |
not provided [RCV000386100] |
ChrX:21868535 [GRCh38] ChrX:21886653 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.661T>A (p.Phe221Ile) |
single nucleotide variant |
not provided [RCV000489505] |
ChrX:21853494 [GRCh38] ChrX:21871612 [GRCh37] ChrX:Xp22.12 |
likely pathogenic |
NM_206923.4(YY2):c.1046A>G (p.Asn349Ser) |
single nucleotide variant |
not provided [RCV001573745] |
ChrX:21857530 [GRCh38] ChrX:21875648 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.2-q25(chrX:11692290-121187337)x2 |
copy number gain |
not provided [RCV000488046] |
ChrX:11692290..121187337 [GRCh37] ChrX:Xp22.2-q25 |
uncertain significance |
NM_015884.4(MBTPS2):c.225-5G>C |
single nucleotide variant |
not provided [RCV000488082] |
ChrX:21845166 [GRCh38] ChrX:21863284 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.348CTCTTCTTCCTCTTCCTC[1] (p.Ser131_Ser136del) |
microsatellite |
not provided [RCV001867915]|not specified [RCV000591837] |
ChrX:21845286..21845303 [GRCh38] ChrX:21863404..21863421 [GRCh37] ChrX:Xp22.12 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_015884.4(MBTPS2):c.290C>T (p.Thr97Met) |
single nucleotide variant |
Inborn genetic diseases [RCV000624223]|not provided [RCV002060690] |
ChrX:21845236 [GRCh38] ChrX:21863354 [GRCh37] ChrX:Xp22.12 |
likely benign|uncertain significance |
Single allele |
duplication |
Syndromic X-linked intellectual disability Lubs type [RCV000768455] |
ChrX:15323210..153542100 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-154930047)x3 |
copy number gain |
See cases [RCV000449437] |
ChrX:168546..154930047 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x3 |
copy number gain |
See cases [RCV000449330] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.3(chrX:168546-43917011)x3 |
copy number gain |
See cases [RCV000449393] |
ChrX:168546..43917011 [GRCh37] ChrX:Xp22.33-11.3 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792) |
copy number loss |
See cases [RCV000449461] |
ChrX:70297..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60701-155246225)x3 |
copy number gain |
See cases [RCV000446270] |
ChrX:60701..155246225 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-55529093)x1 |
copy number loss |
See cases [RCV000446584] |
ChrX:168546..55529093 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-56684082)x1 |
copy number loss |
See cases [RCV000447092] |
ChrX:168546..56684082 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155255792)x1 |
copy number loss |
See cases [RCV000446197] |
ChrX:71267..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:2703632-155233731)x1 |
copy number loss |
See cases [RCV000446712] |
ChrX:2703632..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.22(chrX:168546-52573789)x1 |
copy number loss |
See cases [RCV000447470] |
ChrX:168546..52573789 [GRCh37] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:318707-155224707)x1 |
copy number loss |
See cases [RCV000446667] |
ChrX:318707..155224707 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x4 |
copy number gain |
See cases [RCV000446932] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155196888)x3 |
copy number gain |
See cases [RCV000446310] |
ChrX:168546..155196888 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155081533)x3 |
copy number gain |
See cases [RCV000447253] |
ChrX:168546..155081533 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.695C>A (p.Ala232Glu) |
single nucleotide variant |
not provided [RCV000417649] |
ChrX:21868491 [GRCh38] ChrX:21886609 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168566-155233731)x1 |
copy number loss |
See cases [RCV000445720] |
ChrX:168566..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.1523A>T (p.Asn508Ile) |
single nucleotide variant |
not provided [RCV000421935] |
ChrX:21882618 [GRCh38] ChrX:21900736 [GRCh37] ChrX:Xp22.12 |
likely pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 |
copy number loss |
See cases [RCV000448393] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792)x4 |
copy number gain |
See cases [RCV000448034] |
ChrX:70297..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-11.1(chrX:168546-58140271)x1 |
copy number loss |
See cases [RCV000447773] |
ChrX:168546..58140271 [GRCh37] ChrX:Xp22.33-11.1 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155246585)x1 |
copy number loss |
See cases [RCV000448652] |
ChrX:70297..155246585 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.12-22.11(chrX:21708594-22063592)x2 |
copy number gain |
See cases [RCV000512061] |
ChrX:21708594..22063592 [GRCh37] ChrX:Xp22.12-22.11 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-55240087)x1 |
copy number loss |
See cases [RCV000512136] |
ChrX:168546..55240087 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-21.1(chrX:168546-37515849)x1 |
copy number loss |
See cases [RCV000510590] |
ChrX:168546..37515849 [GRCh37] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168547-151304063)x1 |
copy number loss |
See cases [RCV000510382] |
ChrX:168547..151304063 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-21.1(chrX:168546-35841052)x1 |
copy number loss |
See cases [RCV000510308] |
ChrX:168546..35841052 [GRCh37] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh37/hg19 Xp22.33-q23(chrX:168547-112474026)x1 |
copy number loss |
See cases [RCV000510419] |
ChrX:168547..112474026 [GRCh37] ChrX:Xp22.33-q23 |
pathogenic |
NM_015884.4(MBTPS2):c.1099G>A (p.Ala367Thr) |
single nucleotide variant |
not provided [RCV000498203] |
ChrX:21878530 [GRCh38] ChrX:21896648 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.1(chrX:168546-58527164)x1 |
copy number loss |
See cases [RCV000510437] |
ChrX:168546..58527164 [GRCh37] ChrX:Xp22.33-11.1 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-57504183)x1 |
copy number loss |
See cases [RCV000511615] |
ChrX:168546..57504183 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-57683964)x1 |
copy number loss |
See cases [RCV000512022] |
ChrX:168546..57683964 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-21.2(chrX:168546-31085327)x1 |
copy number loss |
See cases [RCV000511350] |
ChrX:168546..31085327 [GRCh37] ChrX:Xp22.33-21.2 |
pathogenic |
GRCh37/hg19 Xp22.2-21.2(chrX:15290524-29747172)x2 |
copy number gain |
See cases [RCV000511443] |
ChrX:15290524..29747172 [GRCh37] ChrX:Xp22.2-21.2 |
likely pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168547-155233731) |
copy number gain |
See cases [RCV000512020] |
ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.12-22.11(chrX:21708594-22054641)x3 |
copy number gain |
See cases [RCV000511611] |
ChrX:21708594..22054641 [GRCh37] ChrX:Xp22.12-22.11 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-54996659)x1 |
copy number loss |
See cases [RCV000510822] |
ChrX:168546..54996659 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_206923.4(YY2):c.439G>A (p.Gly147Ser) |
single nucleotide variant |
not specified [RCV004320453] |
ChrX:21856923 [GRCh38] ChrX:21875041 [GRCh37] ChrX:Xp22.12 |
likely benign |
GRCh37/hg19 Xp22.33-22.11(chrX:168546-24780527)x3 |
copy number gain |
See cases [RCV000512204] |
ChrX:168546..24780527 [GRCh37] ChrX:Xp22.33-22.11 |
pathogenic |
GRCh37/hg19 Xp22.33-q13.3(chrX:168546-74549686) |
copy number loss |
See cases [RCV000512142] |
ChrX:168546..74549686 [GRCh37] ChrX:Xp22.33-q13.3 |
pathogenic |
NM_015884.4(MBTPS2):c.529A>C (p.Ile177Leu) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV000626122]|not provided [RCV003767837] |
ChrX:21851599 [GRCh38] ChrX:21869717 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.21(chrX:168564-57413442)x1 |
copy number loss |
See cases [RCV000512339] |
ChrX:168564..57413442 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_015884.4(MBTPS2):c.1376A>G (p.Asn459Ser) |
single nucleotide variant |
Osteogenesis imperfecta, type 19 [RCV000675188] |
ChrX:21882471 [GRCh38] ChrX:21900589 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.1515G>C (p.Leu505Phe) |
single nucleotide variant |
Osteogenesis imperfecta, type 19 [RCV000675189] |
ChrX:21882610 [GRCh38] ChrX:21900728 [GRCh37] ChrX:Xp22.12 |
pathogenic |
GRCh37/hg19 Xp22.33-11.23(chrX:168546-46908284)x1 |
copy number loss |
not provided [RCV000684185] |
ChrX:168546..46908284 [GRCh37] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh37/hg19 Xp22.33-22.11(chrX:168546-23785738)x1 |
copy number loss |
not provided [RCV000684183] |
ChrX:168546..23785738 [GRCh37] ChrX:Xp22.33-22.11 |
pathogenic |
GRCh37/hg19 Xp22.33-11.3(chrX:168546-43248706)x1 |
copy number loss |
not provided [RCV000684184] |
ChrX:168546..43248706 [GRCh37] ChrX:Xp22.33-11.3 |
pathogenic |
GRCh37/hg19 Xp22.31-q21.31(chrX:7841947-90815333)x1,2 |
copy number gain |
not provided [RCV000684261] |
ChrX:7841947..90815333 [GRCh37] ChrX:Xp22.31-q21.31 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:60814-55476165)x1 |
copy number loss |
not provided [RCV000753275] |
ChrX:60814..55476165 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh37/hg19 Xp22.33-11.23(chrX:60814-48317386)x1 |
copy number loss |
not provided [RCV000753273] |
ChrX:60814..48317386 [GRCh37] ChrX:Xp22.33-11.23 |
pathogenic |
GRCh37/hg19 Xp22.33-11.22(chrX:60814-51821765)x1 |
copy number loss |
not provided [RCV000753274] |
ChrX:60814..51821765 [GRCh37] ChrX:Xp22.33-11.22 |
pathogenic |
NM_015884.4(MBTPS2):c.375CTCTTC[1] (p.Ser135_Ser136del) |
microsatellite |
not provided [RCV000722421] |
ChrX:21845316..21845321 [GRCh38] ChrX:21863434..21863439 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.12-22.11(chrX:20572692-21957308)x3 |
copy number gain |
not provided [RCV000753417] |
ChrX:20572692..21957308 [GRCh37] ChrX:Xp22.12-22.11 |
benign |
GRCh37/hg19 Xp22.33-q28(chrX:60814-155254881)x2 |
copy number gain |
not provided [RCV000753277] |
ChrX:60814..155254881 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60262-155245765)x1 |
copy number loss |
not provided [RCV000753271] |
ChrX:60262..155245765 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
Single allele |
duplication |
Autism [RCV000754363] |
ChrX:10000..22474705 [GRCh38] ChrX:Xp22.33-22.11 |
likely pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60262-155245765)x3 |
copy number gain |
not provided [RCV000753272] |
ChrX:60262..155245765 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:181779-155171702)x1 |
copy number loss |
not provided [RCV000753278] |
ChrX:181779..155171702 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60814-155236712)x2 |
copy number gain |
not provided [RCV000753276] |
ChrX:60814..155236712 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.224+25G>A |
single nucleotide variant |
not provided [RCV001708691] |
ChrX:21843343 [GRCh38] ChrX:21861461 [GRCh37] ChrX:Xp22.12 |
benign |
GRCh37/hg19 Xp22.33-11.22(chrX:60814-50519984)x1 |
copy number loss |
See cases [RCV000790583] |
ChrX:60814..50519984 [GRCh37] ChrX:Xp22.33-11.22 |
pathogenic |
GRCh37/hg19 Xp22.33-22.11(chrX:537158-22883547)x1 |
copy number loss |
not provided [RCV001007223] |
ChrX:537158..22883547 [GRCh37] ChrX:Xp22.33-22.11 |
pathogenic |
Single allele |
deletion |
Neurodevelopmental disorder [RCV000787440] |
ChrX:1..47140860 [GRCh37] ChrX:Xp22.33-11.23 |
pathogenic |
NM_015884.4(MBTPS2):c.758G>C (p.Gly253Ala) |
single nucleotide variant |
not provided [RCV001585491] |
ChrX:21868554 [GRCh38] ChrX:21886672 [GRCh37] ChrX:Xp22.12 |
pathogenic |
NM_015884.4(MBTPS2):c.307G>A (p.Ala103Thr) |
single nucleotide variant |
not provided [RCV000968429] |
ChrX:21845253 [GRCh38] ChrX:21863371 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.408G>A (p.Ser136=) |
single nucleotide variant |
Osteogenesis imperfecta [RCV002279597]|not provided [RCV000879027] |
ChrX:21845354 [GRCh38] ChrX:21863472 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.846A>G (p.Leu282=) |
single nucleotide variant |
not provided [RCV000948513] |
ChrX:21869554 [GRCh38] ChrX:21887672 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.1407A>G (p.Gln469=) |
single nucleotide variant |
not provided [RCV000968430] |
ChrX:21882502 [GRCh38] ChrX:21900620 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.30G>C (p.Val10=) |
single nucleotide variant |
MBTPS2-related disorder [RCV003942830]|not provided [RCV000919738] |
ChrX:21839764 [GRCh38] ChrX:21857882 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.639G>T (p.Ser213=) |
single nucleotide variant |
not provided [RCV000907941] |
ChrX:21853472 [GRCh38] ChrX:21871590 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.612G>A (p.Leu204=) |
single nucleotide variant |
not provided [RCV000977817] |
ChrX:21853445 [GRCh38] ChrX:21871563 [GRCh37] ChrX:Xp22.12 |
benign |
GRCh37/hg19 Xp22.33-22.11(chrX:801301-23768392) |
copy number gain |
not provided [RCV000767802] |
ChrX:801301..23768392 [GRCh37] ChrX:Xp22.33-22.11 |
pathogenic |
NM_015884.4(MBTPS2):c.639G>A (p.Ser213=) |
single nucleotide variant |
not provided [RCV000915620] |
ChrX:21853472 [GRCh38] ChrX:21871590 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
GRCh37/hg19 Xp22.2-22.11(chrX:15330714-21915234)x2 |
copy number gain |
not provided [RCV000846517] |
ChrX:15330714..21915234 [GRCh37] ChrX:Xp22.2-22.11 |
pathogenic |
GRCh37/hg19 Xp22.12-22.11(chrX:21881463-21908677)x3 |
copy number gain |
not provided [RCV000848215] |
ChrX:21881463..21908677 [GRCh37] ChrX:Xp22.12-22.11 |
uncertain significance |
GRCh37/hg19 Xp22.2-22.11(chrX:13962918-22148232)x2 |
copy number gain |
not provided [RCV000849766] |
ChrX:13962918..22148232 [GRCh37] ChrX:Xp22.2-22.11 |
pathogenic |
GRCh37/hg19 Xp22.2-22.11(chrX:13962918-22148232)x2 |
copy number gain |
not provided [RCV000849768] |
ChrX:13962918..22148232 [GRCh37] ChrX:Xp22.2-22.11 |
pathogenic |
GRCh37/hg19 Xp22.33-21.1(chrX:168546-34753512)x1 |
copy number loss |
not provided [RCV001007559] |
ChrX:168546..34753512 [GRCh37] ChrX:Xp22.33-21.1 |
pathogenic |
GRCh37/hg19 Xp22.12-21.1(chrX:20925922-35511818)x1 |
copy number loss |
not provided [RCV000847678] |
ChrX:20925922..35511818 [GRCh37] ChrX:Xp22.12-21.1 |
pathogenic |
NM_015884.4(MBTPS2):c.485C>T (p.Thr162Met) |
single nucleotide variant |
not provided [RCV000936295] |
ChrX:21851555 [GRCh38] ChrX:21869673 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.119A>C (p.Asn40Thr) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV001197532]|Inborn genetic diseases [RCV002560236] |
ChrX:21843213 [GRCh38] ChrX:21861331 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.4(chrX:168546-38054739)x1 |
copy number loss |
not provided [RCV000845671] |
ChrX:168546..38054739 [GRCh37] ChrX:Xp22.33-11.4 |
pathogenic |
GRCh37/hg19 Xp22.33-q11.1(chrX:168546-61877279)x1 |
copy number loss |
not provided [RCV000846273] |
ChrX:168546..61877279 [GRCh37] ChrX:Xp22.33-q11.1 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x4 |
copy number gain |
not provided [RCV000846039] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-22.11(chrX:2190434-23795839)x3 |
copy number gain |
not provided [RCV000849574] |
ChrX:2190434..23795839 [GRCh37] ChrX:Xp22.33-22.11 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 |
copy number loss |
not provided [RCV000848828] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.910C>A (p.Pro304Thr) |
single nucleotide variant |
not provided [RCV003313621] |
ChrX:21869618 [GRCh38] ChrX:21887736 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.19G>C (p.Val7Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV003249123]|not provided [RCV003779895] |
ChrX:21839753 [GRCh38] ChrX:21857871 [GRCh37] ChrX:Xp22.12 |
likely benign|uncertain significance |
NM_015884.4(MBTPS2):c.1520C>T (p.Ala507Val) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV001197570]|not provided [RCV001859193] |
ChrX:21882615 [GRCh38] ChrX:21900733 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.971-64G>T |
single nucleotide variant |
not provided [RCV001609199] |
ChrX:21877978 [GRCh38] ChrX:21896096 [GRCh37] ChrX:Xp22.12 |
benign |
NM_206923.4(YY2):c.68A>G (p.His23Arg) |
single nucleotide variant |
not specified [RCV004295632] |
ChrX:21856552 [GRCh38] ChrX:21874670 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1499G>A (p.Gly500Asp) |
single nucleotide variant |
not provided [RCV001723447] |
ChrX:21882594 [GRCh38] ChrX:21900712 [GRCh37] ChrX:Xp22.12 |
pathogenic|likely pathogenic |
NM_015884.4(MBTPS2):c.542+314G>A |
single nucleotide variant |
not provided [RCV001676858] |
ChrX:21851926 [GRCh38] ChrX:21870044 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.741G>A (p.Leu247=) |
single nucleotide variant |
not provided [RCV000892602] |
ChrX:21868537 [GRCh38] ChrX:21886655 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.459C>T (p.Pro153=) |
single nucleotide variant |
Osteogenesis imperfecta [RCV002279646]|not provided [RCV000926149]|not specified [RCV001579399] |
ChrX:21851529 [GRCh38] ChrX:21869647 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
GRCh37/hg19 Xp22.33-11.21(chrX:539722-55509385)x1 |
copy number loss |
not provided [RCV001007224] |
ChrX:539722..55509385 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_015884.4(MBTPS2):c.546A>G (p.Glu182=) |
single nucleotide variant |
not provided [RCV000934108] |
ChrX:21853379 [GRCh38] ChrX:21871497 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.218A>G (p.Tyr73Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV002540837]|MBTPS2-related disorder [RCV003950756]|not provided [RCV000912080]|not specified [RCV003994158] |
ChrX:21843312 [GRCh38] ChrX:21861430 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
GRCh37/hg19 Xp22.33-q28(chrX:200855-155240074) |
copy number gain |
Klinefelter syndrome [RCV003236730] |
ChrX:200855..155240074 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.1337+115C>T |
single nucleotide variant |
not provided [RCV001675444] |
ChrX:21881087 [GRCh38] ChrX:21899205 [GRCh37] ChrX:Xp22.12 |
benign |
NC_000023.11:g.21839473C>A |
single nucleotide variant |
not provided [RCV001717871] |
ChrX:21839473 [GRCh38] ChrX:21857591 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.790-229C>T |
single nucleotide variant |
not provided [RCV001686290] |
ChrX:21869269 [GRCh38] ChrX:21887387 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.76-328G>C |
single nucleotide variant |
not provided [RCV001621703] |
ChrX:21842842 [GRCh38] ChrX:21860960 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.224+51G>A |
single nucleotide variant |
not provided [RCV001710240] |
ChrX:21843369 [GRCh38] ChrX:21861487 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.438+59A>C |
single nucleotide variant |
not provided [RCV001648432] |
ChrX:21845443 [GRCh38] ChrX:21863561 [GRCh37] ChrX:Xp22.12 |
benign |
GRCh37/hg19 Xp22.33-11.21(chrX:219609-55466476)x1 |
copy number loss |
See cases [RCV001263061] |
ChrX:219609..55466476 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_206923.4(YY2):c.475G>A (p.Gly159Ser) |
single nucleotide variant |
not provided [RCV002280007] |
ChrX:21856959 [GRCh38] ChrX:21875077 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.22(chrX:168546-52573789) |
copy number loss |
Turner syndrome [RCV002280669] |
ChrX:168546..52573789 [GRCh37] ChrX:Xp22.33-11.22 |
pathogenic |
NM_015884.4(MBTPS2):c.175C>T (p.Arg59Cys) |
single nucleotide variant |
Osteogenesis imperfecta, type 19 [RCV001280809] |
ChrX:21843269 [GRCh38] ChrX:21861387 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.124G>A (p.Gly42Arg) |
single nucleotide variant |
Olmsted syndrome, X-linked [RCV001330691]|not provided [RCV003770829] |
ChrX:21843218 [GRCh38] ChrX:21861336 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-56457794)x1 |
copy number loss |
not provided [RCV001281358] |
ChrX:168546..56457794 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_015884.4(MBTPS2):c.1525G>T (p.Val509Leu) |
single nucleotide variant |
not provided [RCV001787495] |
ChrX:21882620 [GRCh38] ChrX:21900738 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.516A>C (p.Glu172Asp) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV001330692] |
ChrX:21851586 [GRCh38] ChrX:21869704 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:60000-155234966)x1 |
copy number loss |
not provided [RCV001537933] |
ChrX:60000..155234966 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.542+253A>G |
single nucleotide variant |
not provided [RCV001679589] |
ChrX:21851865 [GRCh38] ChrX:21869983 [GRCh37] ChrX:Xp22.12 |
benign |
NC_000023.11:g.21839195AT[9] |
microsatellite |
not provided [RCV001695813] |
ChrX:21839194..21839195 [GRCh38] ChrX:21857312..21857313 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.224+196T>C |
single nucleotide variant |
not provided [RCV001653403] |
ChrX:21843514 [GRCh38] ChrX:21861632 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.543-190C>A |
single nucleotide variant |
not provided [RCV001540777] |
ChrX:21853186 [GRCh38] ChrX:21871304 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.1556G>C (p.Arg519Pro) |
single nucleotide variant |
not provided [RCV001773278] |
ChrX:21882651 [GRCh38] ChrX:21900769 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1555C>G (p.Arg519Gly) |
single nucleotide variant |
not provided [RCV003238004] |
ChrX:21882650 [GRCh38] ChrX:21900768 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-57841304) |
copy number loss |
Turner syndrome [RCV002280671] |
ChrX:168546..57841304 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_015884.4(MBTPS2):c.1534G>A (p.Gly512Arg) |
single nucleotide variant |
not provided [RCV001816529] |
ChrX:21882629 [GRCh38] ChrX:21900747 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x3 |
copy number gain |
not provided [RCV001829212] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.1457A>G (p.Asp486Gly) |
single nucleotide variant |
not provided [RCV001910974] |
ChrX:21882552 [GRCh38] ChrX:21900670 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1255T>C (p.Tyr419His) |
single nucleotide variant |
not provided [RCV002040491] |
ChrX:21878686 [GRCh38] ChrX:21896804 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NC_000023.10:g.(?_21755681)_(22266301_?)del |
deletion |
not provided [RCV001870831] |
ChrX:21755681..22266301 [GRCh37] ChrX:Xp22.12-22.11 |
pathogenic |
NM_015884.4(MBTPS2):c.1159A>G (p.Ile387Val) |
single nucleotide variant |
not provided [RCV002043068] |
ChrX:21878590 [GRCh38] ChrX:21896708 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.12-22.11(chrX:20760624-22571267)x2 |
copy number gain |
not provided [RCV001827761] |
ChrX:20760624..22571267 [GRCh37] ChrX:Xp22.12-22.11 |
uncertain significance |
NM_015884.4(MBTPS2):c.17TGG[8] (p.Val10_Val11dup) |
microsatellite |
not provided [RCV002039864] |
ChrX:21839750..21839751 [GRCh38] ChrX:21857868..21857869 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 |
copy number loss |
not provided [RCV001834509] |
ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.176G>A (p.Arg59His) |
single nucleotide variant |
not provided [RCV001879143] |
ChrX:21843270 [GRCh38] ChrX:21861388 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.274T>C (p.Phe92Leu) |
single nucleotide variant |
not provided [RCV002011706] |
ChrX:21845220 [GRCh38] ChrX:21863338 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.217T>A (p.Tyr73Asn) |
single nucleotide variant |
not provided [RCV002127336] |
ChrX:21843311 [GRCh38] ChrX:21861429 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.1065+12C>T |
single nucleotide variant |
not provided [RCV002106372] |
ChrX:21878148 [GRCh38] ChrX:21896266 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.224+15_224+17del |
microsatellite |
not provided [RCV002088187] |
ChrX:21843329..21843331 [GRCh38] ChrX:21861447..21861449 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.783T>A (p.Val261=) |
single nucleotide variant |
not provided [RCV002208832] |
ChrX:21868579 [GRCh38] ChrX:21886697 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.119A>G (p.Asn40Ser) |
single nucleotide variant |
MBTPS2-related disorder [RCV003968837]|not provided [RCV002075084] |
ChrX:21843213 [GRCh38] ChrX:21861331 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.1284A>G (p.Pro428=) |
single nucleotide variant |
not provided [RCV002175101] |
ChrX:21880919 [GRCh38] ChrX:21899037 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.438+18G>A |
single nucleotide variant |
not provided [RCV002173847] |
ChrX:21845402 [GRCh38] ChrX:21863520 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.1059G>A (p.Lys353=) |
single nucleotide variant |
not provided [RCV002179727] |
ChrX:21878130 [GRCh38] ChrX:21896248 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.970+17A>G |
single nucleotide variant |
not provided [RCV002140616] |
ChrX:21869695 [GRCh38] ChrX:21887813 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1237C>T (p.His413Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV003303741]|MBTPS2-related disorder [RCV003933329]|Osteogenesis imperfecta [RCV002277008]|not provided [RCV002216652] |
ChrX:21878668 [GRCh38] ChrX:21896786 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.250G>A (p.Val84Ile) |
single nucleotide variant |
not provided [RCV002118144]|not specified [RCV004770410] |
ChrX:21845196 [GRCh38] ChrX:21863314 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.875A>G (p.Asp292Gly) |
single nucleotide variant |
not provided [RCV003114792] |
ChrX:21869583 [GRCh38] ChrX:21887701 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NC_000023.10:g.(?_21857853)_(21900773_?)del |
deletion |
not provided [RCV003119655] |
ChrX:21857853..21900773 [GRCh37] ChrX:Xp22.12-22.11 |
uncertain significance |
NM_015884.4(MBTPS2):c.527G>A (p.Gly176Glu) |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV003148095]|Keratosis follicularis spinulosa decalvans, X-linked [RCV003148094]|Olmsted syndrome, X-linked [RCV003148096]|Osteogenesis imperfecta, type 19 [RCV003148097] |
ChrX:21851597 [GRCh38] ChrX:21869715 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:1-155270560) |
copy number gain |
46,XX sex reversal 1 [RCV002280665]|Hypotonia [RCV002280667]|Trisomy X syndrome [RCV002280666] |
ChrX:1..155270560 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_206923.4(YY2):c.743G>A (p.Gly248Glu) |
single nucleotide variant |
not specified [RCV004329486] |
ChrX:21857227 [GRCh38] ChrX:21875345 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.643G>T (p.Val215Phe) |
single nucleotide variant |
not provided [RCV002283128] |
ChrX:21853476 [GRCh38] ChrX:21871594 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:61545-155226048)x2 |
copy number gain |
Klinefelter syndrome [RCV002282732] |
ChrX:61545..155226048 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.2-q28(chrX:11522765-155233731)x1 |
copy number loss |
See cases [RCV002286357] |
ChrX:11522765..155233731 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:1-155270560) |
copy number loss |
Turner syndrome [RCV002280668] |
ChrX:1..155270560 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.671-10C>G |
single nucleotide variant |
Osteogenesis imperfecta [RCV002277814]|not provided [RCV003096239] |
ChrX:21868457 [GRCh38] ChrX:21886575 [GRCh37] ChrX:Xp22.12 |
benign|uncertain significance |
Single allele |
complex |
Turner syndrome [RCV002280670] |
ChrX:590376..56315041 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
GRCh38/hg38 Xp22.33-22.12(chrX:10701-21866242)x3 |
copy number gain |
See cases [RCV000137383] |
ChrX:10701..21866242 [GRCh38] ChrX:60701..21884360 [GRCh37] ChrX:701..21794281 [NCBI36] ChrX:Xp22.33-22.12 |
uncertain significance |
Single allele |
duplication |
Autism [RCV000754365] |
ChrX:1..156040895 [GRCh38] ChrX:Xp22.33-q28 |
pathogenic |
NM_015884.4(MBTPS2):c.1123A>G (p.Lys375Glu) |
single nucleotide variant |
not provided [RCV002304704] |
ChrX:21878554 [GRCh38] ChrX:21896672 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.348CTCTTCTTCCTCTTCCTC[3] (p.Ser136_Leu137insSerSerSerSerSerSer) |
microsatellite |
not provided [RCV002947893] |
ChrX:21845285..21845286 [GRCh38] ChrX:21863403..21863404 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.970+4T>A |
single nucleotide variant |
not provided [RCV002617621] |
ChrX:21869682 [GRCh38] ChrX:21887800 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.736C>T (p.Leu246Phe) |
single nucleotide variant |
Inborn genetic diseases [RCV002839759] |
ChrX:21868532 [GRCh38] ChrX:21886650 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1261+12T>C |
single nucleotide variant |
not provided [RCV002614617] |
ChrX:21878704 [GRCh38] ChrX:21896822 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.12G>A (p.Val4=) |
single nucleotide variant |
not provided [RCV003016290] |
ChrX:21839746 [GRCh38] ChrX:21857864 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_206923.4(YY2):c.1009G>T (p.Gly337Cys) |
single nucleotide variant |
not specified [RCV004111750] |
ChrX:21857493 [GRCh38] ChrX:21875611 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.790-11C>T |
single nucleotide variant |
not provided [RCV002776044] |
ChrX:21869487 [GRCh38] ChrX:21887605 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.145C>T (p.His49Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV002772798] |
ChrX:21843239 [GRCh38] ChrX:21861357 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1417A>C (p.Asn473His) |
single nucleotide variant |
not provided [RCV003075546] |
ChrX:21882512 [GRCh38] ChrX:21900630 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.384TTC[1] (p.Ser136del) |
microsatellite |
MBTPS2-related disorder [RCV003943722]|not provided [RCV003052929] |
ChrX:21845328..21845330 [GRCh38] ChrX:21863446..21863448 [GRCh37] ChrX:Xp22.12 |
likely benign|uncertain significance |
NM_015884.4(MBTPS2):c.67G>T (p.Val23Leu) |
single nucleotide variant |
not provided [RCV003021504] |
ChrX:21839801 [GRCh38] ChrX:21857919 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.622C>T (p.Pro208Ser) |
single nucleotide variant |
not specified [RCV004185321] |
ChrX:21857106 [GRCh38] ChrX:21875224 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.707T>C (p.Ile236Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002911583] |
ChrX:21868503 [GRCh38] ChrX:21886621 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_206923.4(YY2):c.409C>T (p.Arg137Cys) |
single nucleotide variant |
not specified [RCV004130038] |
ChrX:21856893 [GRCh38] ChrX:21875011 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.54C>T (p.Tyr18=) |
single nucleotide variant |
not provided [RCV002979044] |
ChrX:21839788 [GRCh38] ChrX:21857906 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.405_407del (p.Ser136del) |
deletion |
not provided [RCV002926851] |
ChrX:21845349..21845351 [GRCh38] ChrX:21863467..21863469 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1066-19A>G |
single nucleotide variant |
not provided [RCV002691028] |
ChrX:21878478 [GRCh38] ChrX:21896596 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.366_401dup (p.Ser136_Leu137insSerSerSerSerSerSerSerSerSerSerSerSer) |
duplication |
not provided [RCV003035965] |
ChrX:21845303..21845304 [GRCh38] ChrX:21863421..21863422 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.327T>C (p.Ser109=) |
single nucleotide variant |
not provided [RCV002571061] |
ChrX:21845273 [GRCh38] ChrX:21863391 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.874G>A (p.Asp292Asn) |
single nucleotide variant |
Inborn genetic diseases [RCV002709380] |
ChrX:21869582 [GRCh38] ChrX:21887700 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.1007C>G (p.Thr336Ser) |
single nucleotide variant |
not specified [RCV004245291] |
ChrX:21857491 [GRCh38] ChrX:21875609 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.245T>C (p.Phe82Ser) |
single nucleotide variant |
not provided [RCV002851188] |
ChrX:21845191 [GRCh38] ChrX:21863309 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1207C>A (p.Pro403Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002955354] |
ChrX:21878638 [GRCh38] ChrX:21896756 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.543-12G>A |
single nucleotide variant |
not provided [RCV002642939] |
ChrX:21853364 [GRCh38] ChrX:21871482 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.33G>A (p.Val11=) |
single nucleotide variant |
not provided [RCV003024224] |
ChrX:21839767 [GRCh38] ChrX:21857885 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.508G>A (p.Glu170Lys) |
single nucleotide variant |
not specified [RCV004154829] |
ChrX:21856992 [GRCh38] ChrX:21875110 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.581A>G (p.Asn194Ser) |
single nucleotide variant |
not specified [RCV004125567] |
ChrX:21857065 [GRCh38] ChrX:21875183 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.843T>C (p.His281=) |
single nucleotide variant |
MBTPS2-related disorder [RCV003946273]|not provided [RCV002602224] |
ChrX:21869551 [GRCh38] ChrX:21887669 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_206923.4(YY2):c.284A>G (p.Asn95Ser) |
single nucleotide variant |
not specified [RCV004132679] |
ChrX:21856768 [GRCh38] ChrX:21874886 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1337A>G (p.Lys446Arg) |
single nucleotide variant |
not provided [RCV002653755] |
ChrX:21880972 [GRCh38] ChrX:21899090 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1066-13A>G |
single nucleotide variant |
not provided [RCV002609405] |
ChrX:21878484 [GRCh38] ChrX:21896602 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_206923.4(YY2):c.551C>G (p.Ser184Cys) |
single nucleotide variant |
not specified [RCV004180548] |
ChrX:21857035 [GRCh38] ChrX:21875153 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1185T>C (p.Thr395=) |
single nucleotide variant |
not provided [RCV003069554] |
ChrX:21878616 [GRCh38] ChrX:21896734 [GRCh37] ChrX:Xp22.12 |
benign |
NM_015884.4(MBTPS2):c.936A>G (p.Ala312=) |
single nucleotide variant |
not provided [RCV002635713] |
ChrX:21869644 [GRCh38] ChrX:21887762 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.396TTCCTC[1] (p.Ser135_Ser136del) |
microsatellite |
not provided [RCV002609102] |
ChrX:21845340..21845345 [GRCh38] ChrX:21863458..21863463 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.49G>A (p.Val17Ile) |
single nucleotide variant |
not provided [RCV002613262] |
ChrX:21839783 [GRCh38] ChrX:21857901 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.332T>G (p.Ile111Ser) |
single nucleotide variant |
not specified [RCV004267224] |
ChrX:21856816 [GRCh38] ChrX:21874934 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.574G>A (p.Asp192Asn) |
single nucleotide variant |
not specified [RCV004264267] |
ChrX:21857058 [GRCh38] ChrX:21875176 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.553G>A (p.Val185Met) |
single nucleotide variant |
not specified [RCV004280270] |
ChrX:21857037 [GRCh38] ChrX:21875155 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.568C>T (p.Pro190Ser) |
single nucleotide variant |
not provided [RCV004696328]|not specified [RCV004254150] |
ChrX:21857052 [GRCh38] ChrX:21875170 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.842A>T (p.His281Leu) |
single nucleotide variant |
not provided [RCV003328852] |
ChrX:21869550 [GRCh38] ChrX:21887668 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.901G>A (p.Ala301Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003370523]|not provided [RCV003738439] |
ChrX:21869609 [GRCh38] ChrX:21887727 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.670+2688G>C |
single nucleotide variant |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV003333517]|Keratosis follicularis spinulosa decalvans, X-linked [RCV003333516]|Olmsted syndrome, X-linked [RCV003333518]|Osteogenesis imperfecta, type 19 [RCV003333519] |
ChrX:21856191 [GRCh38] ChrX:21874309 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1346T>C (p.Ile449Thr) |
single nucleotide variant |
not provided [RCV003571939] |
ChrX:21882441 [GRCh38] ChrX:21900559 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.33-11.22(chrX:2696762-53113314)x1 |
copy number loss |
not provided [RCV003483407] |
ChrX:2696762..53113314 [GRCh37] ChrX:Xp22.33-11.22 |
pathogenic |
NM_015884.4(MBTPS2):c.67G>C (p.Val23Leu) |
single nucleotide variant |
not provided [RCV003441140] |
ChrX:21839801 [GRCh38] ChrX:21857919 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh37/hg19 Xp22.13-22.11(chrX:18411391-22528403)x3 |
copy number gain |
not provided [RCV003485279] |
ChrX:18411391..22528403 [GRCh37] ChrX:Xp22.13-22.11 |
uncertain significance |
GRCh37/hg19 Xp22.33-21.2(chrX:168547-30774453)x2 |
copy number gain |
not provided [RCV003483939] |
ChrX:168547..30774453 [GRCh37] ChrX:Xp22.33-21.2 |
pathogenic |
NM_015884.4(MBTPS2):c.1026T>C (p.Asp342=) |
single nucleotide variant |
not provided [RCV003430436] |
ChrX:21878097 [GRCh38] ChrX:21896215 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.304T>G (p.Leu102Val) |
single nucleotide variant |
MBTPS2-related disorder [RCV003397350] |
ChrX:21845250 [GRCh38] ChrX:21863368 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.339T>C (p.Tyr113=) |
single nucleotide variant |
not provided [RCV003430433] |
ChrX:21845285 [GRCh38] ChrX:21863403 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_206923.4(YY2):c.867C>T (p.Gly289=) |
single nucleotide variant |
not provided [RCV003430434] |
ChrX:21857351 [GRCh38] ChrX:21875469 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.933T>C (p.Ser311=) |
single nucleotide variant |
not provided [RCV003430435] |
ChrX:21869641 [GRCh38] ChrX:21887759 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1461T>C (p.Asn487=) |
single nucleotide variant |
not provided [RCV003430437] |
ChrX:21882556 [GRCh38] ChrX:21900674 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.550G>A (p.Val184Ile) |
single nucleotide variant |
not provided [RCV003543980] |
ChrX:21853383 [GRCh38] ChrX:21871501 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.670+8A>C |
single nucleotide variant |
not provided [RCV003576837] |
ChrX:21853511 [GRCh38] ChrX:21871629 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.971-7T>C |
single nucleotide variant |
not provided [RCV003577695] |
ChrX:21878035 [GRCh38] ChrX:21896153 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.31G>A (p.Val11Met) |
single nucleotide variant |
not provided [RCV003575215] |
ChrX:21839765 [GRCh38] ChrX:21857883 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.63C>T (p.Asp21=) |
single nucleotide variant |
not provided [RCV003714852] |
ChrX:21839797 [GRCh38] ChrX:21857915 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1337+15G>A |
single nucleotide variant |
not provided [RCV003880066] |
ChrX:21880987 [GRCh38] ChrX:21899105 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.224+20G>A |
single nucleotide variant |
not provided [RCV003850684] |
ChrX:21843338 [GRCh38] ChrX:21861456 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1338-18T>C |
single nucleotide variant |
not provided [RCV003673831] |
ChrX:21882415 [GRCh38] ChrX:21900533 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1452T>G (p.Ile484Met) |
single nucleotide variant |
not provided [RCV003669442] |
ChrX:21882547 [GRCh38] ChrX:21900665 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.16C>T (p.Leu6=) |
single nucleotide variant |
not provided [RCV003835753] |
ChrX:21839750 [GRCh38] ChrX:21857868 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1523A>C (p.Asn508Thr) |
single nucleotide variant |
not provided [RCV003560204] |
ChrX:21882618 [GRCh38] ChrX:21900736 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.254T>C (p.Ile85Thr) |
single nucleotide variant |
not provided [RCV003855393] |
ChrX:21845200 [GRCh38] ChrX:21863318 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.438+10G>A |
single nucleotide variant |
MBTPS2-related disorder [RCV003929369]|not provided [RCV003850105] |
ChrX:21845394 [GRCh38] ChrX:21863512 [GRCh37] ChrX:Xp22.12 |
benign|likely benign |
NM_015884.4(MBTPS2):c.1238A>T (p.His413Leu) |
single nucleotide variant |
not provided [RCV003700815] |
ChrX:21878669 [GRCh38] ChrX:21896787 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.363CTC[1] (p.Ser136del) |
microsatellite |
not provided [RCV003701786] |
ChrX:21845307..21845309 [GRCh38] ChrX:21863425..21863427 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.624T>C (p.His208=) |
single nucleotide variant |
not provided [RCV003819018] |
ChrX:21853457 [GRCh38] ChrX:21871575 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.554G>A (p.Arg185Gln) |
single nucleotide variant |
not provided [RCV003675467] |
ChrX:21853387 [GRCh38] ChrX:21871505 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1318G>T (p.Val440Phe) |
single nucleotide variant |
not provided [RCV003679517] |
ChrX:21880953 [GRCh38] ChrX:21899071 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.917T>C (p.Ile306Thr) |
single nucleotide variant |
not provided [RCV003872468] |
ChrX:21869625 [GRCh38] ChrX:21887743 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1482G>T (p.Gly494=) |
single nucleotide variant |
not provided [RCV003728442] |
ChrX:21882577 [GRCh38] ChrX:21900695 [GRCh37] ChrX:Xp22.12 |
likely benign |
GRCh37/hg19 Xp22.33-11.1(chrX:168546-58364114) |
copy number loss |
not specified [RCV003986240] |
ChrX:168546..58364114 [GRCh37] ChrX:Xp22.33-11.1 |
pathogenic |
GRCh37/hg19 Xp22.33-11.21(chrX:168546-55653170) |
copy number loss |
not specified [RCV003986200] |
ChrX:168546..55653170 [GRCh37] ChrX:Xp22.33-11.21 |
pathogenic |
NM_015884.4(MBTPS2):c.1044A>G (p.Arg348=) |
single nucleotide variant |
not provided [RCV003718787] |
ChrX:21878115 [GRCh38] ChrX:21896233 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.638C>T (p.Ser213Leu) |
single nucleotide variant |
not provided [RCV003734696] |
ChrX:21853471 [GRCh38] ChrX:21871589 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.702G>T (p.Leu234Phe) |
single nucleotide variant |
not provided [RCV003550303] |
ChrX:21868498 [GRCh38] ChrX:21886616 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.903C>T (p.Ala301=) |
single nucleotide variant |
not provided [RCV003550523] |
ChrX:21869611 [GRCh38] ChrX:21887729 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.123C>T (p.Asn41=) |
single nucleotide variant |
not provided [RCV003728541] |
ChrX:21843217 [GRCh38] ChrX:21861335 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.859G>A (p.Val287Ile) |
single nucleotide variant |
not provided [RCV003732311] |
ChrX:21869567 [GRCh38] ChrX:21887685 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.390_392del (p.Ser136del) |
deletion |
not provided [RCV003732866] |
ChrX:21845334..21845336 [GRCh38] ChrX:21863452..21863454 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.980G>A (p.Arg327Gln) |
single nucleotide variant |
not provided [RCV003820088] |
ChrX:21878051 [GRCh38] ChrX:21896169 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1061G>A (p.Arg354His) |
single nucleotide variant |
not provided [RCV003841042] |
ChrX:21878132 [GRCh38] ChrX:21896250 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.316A>G (p.Met106Val) |
single nucleotide variant |
Inborn genetic diseases [RCV004419025] |
ChrX:21845262 [GRCh38] ChrX:21863380 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.871C>A (p.Gln291Lys) |
single nucleotide variant |
Inborn genetic diseases [RCV004419026] |
ChrX:21869579 [GRCh38] ChrX:21887697 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.689T>C (p.Val230Ala) |
single nucleotide variant |
not provided [RCV004547060] |
ChrX:21868485 [GRCh38] ChrX:21886603 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.1105A>C (p.Lys369Gln) |
single nucleotide variant |
not specified [RCV004478570] |
ChrX:21857589 [GRCh38] ChrX:21875707 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.118G>A (p.Val40Ile) |
single nucleotide variant |
not specified [RCV004478571] |
ChrX:21856602 [GRCh38] ChrX:21874720 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_206923.4(YY2):c.312G>T (p.Gln104His) |
single nucleotide variant |
not specified [RCV004478572] |
ChrX:21856796 [GRCh38] ChrX:21874914 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:2757837-156030895)x2 |
copy number gain |
Klinefelter syndrome [RCV004579655] |
ChrX:2757837..156030895 [GRCh38] ChrX:Xp22.33-q28 |
pathogenic |
NM_206923.4(YY2):c.504G>C (p.Lys168Asn) |
single nucleotide variant |
not specified [RCV004686021] |
ChrX:21856988 [GRCh38] ChrX:21875106 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_206923.4(YY2):c.127G>A (p.Glu43Lys) |
single nucleotide variant |
not specified [RCV004686022] |
ChrX:21856611 [GRCh38] ChrX:21874729 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.131G>C (p.Ser44Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV004637784] |
ChrX:21843225 [GRCh38] ChrX:21861343 [GRCh37] ChrX:Xp22.12 |
likely benign |
NM_015884.4(MBTPS2):c.1397T>C (p.Leu466Ser) |
single nucleotide variant |
not provided [RCV004723990] |
ChrX:21882492 [GRCh38] ChrX:21900610 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1261+5G>C |
single nucleotide variant |
MBTPS2-related disorder [RCV004755558] |
ChrX:21878697 [GRCh38] ChrX:21896815 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.804T>C (p.Ile268=) |
single nucleotide variant |
not provided [RCV004727497] |
ChrX:21869512 [GRCh38] ChrX:21887630 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1151G>A (p.Ser384Asn) |
single nucleotide variant |
not provided [RCV004760094] |
|
uncertain significance |
NM_015884.4(MBTPS2):c.971-6_971-5del |
microsatellite |
IFAP syndrome 1, with or without BRESHECK syndrome [RCV003990338] |
ChrX:21878033..21878034 [GRCh38] ChrX:21896151..21896152 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.416A>G (p.Asn139Ser) |
single nucleotide variant |
not provided [RCV002726028] |
ChrX:21845362 [GRCh38] ChrX:21863480 [GRCh37] ChrX:Xp22.12 |
uncertain significance |
NM_015884.4(MBTPS2):c.1243C>G (p.Leu415Val) |
single nucleotide variant |
not provided [RCV003131557] |
ChrX:21878674 [GRCh38] ChrX:21896792 [GRCh37] ChrX:Xp22.12 |
uncertain significance |