PARK7 (Parkinsonism associated deglycase) - Rat Genome Database

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Gene: PARK7 (Parkinsonism associated deglycase) Homo sapiens
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Symbol: PARK7
Name: Parkinsonism associated deglycase
RGD ID: 1344212
HGNC Page HGNC:16369
Description: Enables several functions, including enzyme activator activity; enzyme binding activity; and transition metal ion binding activity. Involved in several processes, including negative regulation of apoptotic signaling pathway; regulation of protein modification process; and response to hydrogen peroxide. Located in several cellular components, including PML body; mitochondrion; and perinuclear region of cytoplasm. Implicated in Parkinson's disease; Parkinson's disease 7; Parkinsonism; cerebral infarction; and middle cerebral artery infarction.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DJ-1; DJ1; epididymis secretory sperm binding protein Li 67p; FLJ27376; FLJ34360; FLJ92274; GATD2; HEL-S-67p; maillard deglycase; oncogene DJ1; Parkinson disease (autosomal recessive, early onset) 7; Parkinson disease protein 7; parkinson protein 7; protein/nucleic acid deglycase DJ-1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: PARK7P1   PARK7P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,961,711 - 7,985,505 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl17,954,291 - 7,985,505 (+)EnsemblGRCh38hg38GRCh38
GRCh3718,021,771 - 8,045,565 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,944,380 - 7,967,926 (+)NCBINCBI36Build 36hg18NCBI36
Build 3417,956,058 - 7,979,602NCBI
Celera17,128,771 - 7,152,398 (+)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef17,169,316 - 7,193,163 (+)NCBIHuRef
CHM1_118,009,469 - 8,033,097 (+)NCBICHM1_1
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
PARK7Humanamyotrophic lateral sclerosis-parkinsonism/dementia complex 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Guam diseaseClinVarPMID:25741868
PARK7Humanchromosome 1p36 deletion syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 1p36 deletion syndromeClinVar 
PARK7Humanearly-onset Parkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Young-onset Parkinson diseaseClinVarPMID:25741868
PARK7Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
PARK7Humanjuvenile-onset Parkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Juvenile-onset Parkinson diseaseClinVar 
PARK7Humanlate onset Parkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson disease and late-onsetClinVar 
PARK7Humanmaturity-onset diabetes of the young type 5  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Renal cysts and diabetes syndromeClinVarPMID:12891685 more ...
PARK7Humanmotor neuron disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Motor neuron diseaseClinVarPMID:25741868
PARK7HumanNeurodevelopmental Disorders  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868
PARK7HumanParkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson Disease and RecessiveClinVar 
PARK7HumanParkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson Disease and RecessiveClinVarPMID:12953260 more ...
PARK7HumanParkinson's disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson Disease and RecessiveClinVarPMID:25741868
PARK7HumanParkinson's disease 2  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Young-onset Parkinson diseaseClinVarPMID:25741868
PARK7HumanParkinson's disease 6  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parkinson disease more ...ClinVarPMID:16632486
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:22960331 and PMID:28492532
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:25741868 and PMID:28492532
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:25741868 more ...
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:12891675 more ...
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:18973254 more ...
PARK7HumanParkinson's disease 7  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Autosomal recessive early-onset Parkinson disease 7ClinVarPMID:28492532
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Original Reference(s)
PARK7HumanChemical and Drug Induced Liver Injury  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:25231249
PARK7Humanhepatocellular carcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:21472284
PARK7HumanNerve Degeneration  EXP 11554173CTD Direct Evidence: therapeuticCTDPMID:29649621
PARK7Humanosteoporosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18924182
PARK7HumanParkinson's disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:15784737 more ...
PARK7HumanParkinson's disease 7  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:28348719
PARK7HumanParkinsonism  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:23046578 and PMID:26558463
PARK7Humanperinatal necrotizing enterocolitis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18806098
PARK7HumanReticulocytosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:20800516
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PARK7HumanParkinson's disease 7  ISSPark7 (Mus musculus)13592920OMIM:606324MouseDO 
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Original Reference(s)
PARK7HumanParkinson's disease 7  IAGP 7240710 OMIM 

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Original Reference(s)
PARK7Human(-)-epigallocatechin 3-gallate decreases expressionISOPark7 (Mus musculus)6480464epigallocatechin gallate results in decreased expression of PARK7 mRNACTDPMID:25585349
PARK7Human(1->4)-beta-D-glucan multiple interactionsISOPark7 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of PARK7 mRNACTDPMID:36331819
PARK7Human(R,R,R)-alpha-tocopherol multiple interactionsEXP 6480464alpha-Tocopherol inhibits the reaction [Rotenone affects the localization of PARK7 protein]CTDPMID:16439141
PARK7Human(S)-nicotine multiple interactionsISOPark7 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
PARK7Human1,2-dimethylhydrazine multiple interactionsISOPark7 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of PARK7 mRNACTDPMID:22206623
PARK7Human1-bromopropane decreases expressionISOPark7 (Rattus norvegicus)64804641-bromopropane results in decreased expression of PARK7 proteinCTDPMID:21925529
PARK7Human1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine decreases response to substanceISOPark7 (Mus musculus)6480464PARK7 protein results in decreased susceptibility to 1-Methyl-4-phenyl-1 more ...CTDPMID:15784737
PARK7Human1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISOPark7 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807 and PMID:22511790
PARK7Human1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISOPark7 (Mus musculus)64804641-Methyl-4-phenyl-1 more ...CTDPMID:20230807
PARK7Human15-deoxy-Delta(12,14)-prostaglandin J2 multiple interactionsISOPark7 (Rattus norvegicus)648046415-deoxy-delta(12 more ...CTDPMID:22245093
PARK7Human17beta-estradiol decreases expressionISOPark7 (Mus musculus)6480464Estradiol results in decreased expression of PARK7 mRNACTDPMID:39298647
PARK7Human17beta-hydroxy-17-methylestra-4,9,11-trien-3-one increases expressionEXP 6480464Metribolone results in increased expression of PARK7 proteinCTDPMID:17152098
PARK7Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPark7 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PARK7 mRNACTDPMID:21570461
PARK7Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPark7 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of PARK7 mRNACTDPMID:32109520 and PMID:34747641
PARK7Human2,6-dimethoxyphenol multiple interactionsEXP 6480464[pyrogallol 1 more ...CTDPMID:38598786
PARK7Human2-amino-14,16-dimethyloctadecan-3-ol decreases expressionEXP 64804642-amino-14 and 16-dimethyloctadecan-3-ol results in decreased expression of PARK7 proteinCTDPMID:32044396
PARK7Human3-chloropropane-1,2-diol increases expressionISOPark7 (Rattus norvegicus)6480464alpha-Chlorohydrin analog results in increased expression of PARK7 protein and alpha-Chlorohydrin results in increased expression of PARK7 proteinCTDPMID:26072098 and PMID:26597043
PARK7Human3-chloropropane-1,2-diol increases oxidationISOPark7 (Mus musculus)6480464alpha-Chlorohydrin results in increased oxidation of PARK7 proteinCTDPMID:31712104
PARK7Human3-chloropropane-1,2-diol affects expressionISOPark7 (Rattus norvegicus)6480464alpha-Chlorohydrin affects the expression of PARK7 proteinCTDPMID:26072098
PARK7Human4,4'-sulfonyldiphenol increases expressionISOPark7 (Mus musculus)6480464bisphenol S results in increased expression of PARK7 mRNACTDPMID:39298647

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Biological Process
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Original Reference(s)
PARK7Humanadult locomotory behavior acts_upstream_of_or_withinIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humanandrogen receptor signaling pathway involved_inIMP 150520179 PMID:17510388ParkinsonsUK-UCLPMID:17510388
PARK7Humanautophagy involved_inIEAUniProtKB-KW:KW-0072150520179 UniProtGO_REF:0000043
PARK7Humancellular detoxification of aldehyde involved_inIDA 150520179 PMID:28993701UniProtPMID:28993701
PARK7Humancellular detoxification of methylglyoxal involved_inIDA 150520179 PMID:28993701UniProtPMID:28993701
PARK7Humancellular oxidant detoxification involved_inIEAGO:0051920150520179 GOCGO_REF:0000108
PARK7Humancellular response to glyoxal involved_inIDA 150520179 PMID:22523093ParkinsonsUK-UCLPMID:22523093
PARK7Humancellular response to glyoxal involved_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humancellular response to hydrogen peroxide involved_inIMP 150520179 PMID:22492997ParkinsonsUK-UCLPMID:22492997
PARK7Humancellular response to hypoxia  ISOPark7 (Rattus norvegicus)9068941 RGDPMID:29069575 and REF_RGD_ID:151347449
PARK7Humancellular response to lipopolysaccharide  ISOPark7 (Rattus norvegicus)9068941 RGDPMID:23847046 and REF_RGD_ID:13462068
PARK7Humancellular response to oxidative stress involved_inIDA 150520179 PMID:15983381 more ...ParkinsonsUK-UCLPMID:15983381 more ...
PARK7Humancellular response to oxidative stress involved_inIMP 150520179 PMID:24899725ParkinsonsUK-UCLPMID:24899725
PARK7Humancellular response to oxidative stress involved_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humancellular response to reactive oxygen species acts_upstream_of_or_withinIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humandetection of oxidative stress involved_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humandetoxification of copper ion involved_inIMP 150520179 PMID:23792957UniProtPMID:23792957
PARK7Humandetoxification of copper ion involved_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humandetoxification of hydrogen peroxide involved_inIDA 150520179 PMID:14749723UniProtPMID:14749723
PARK7Humandetoxification of mercury ion involved_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
PARK7Humanadherens junction located_inHDA 150520179 PMID:25468996BHF-UCLPMID:25468996
PARK7Humanaxon  ISOPark7 (Rattus norvegicus)9068941 RGDPMID:15673657 and REF_RGD_ID:1601078
PARK7Humanaxon located_inISSUniProtKB:O88767150520179 ParkinsonsUK-UCLGO_REF:0000024
PARK7Humancell body located_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humanchromatin located_inIDA 150520179 PMID:16731528ParkinsonsUK-UCLPMID:16731528
PARK7Humancytoplasm located_inIDA 150520179 PMID:12446870 more ...ParkinsonsUK-UCLPMID:12446870 more ...
PARK7Humancytoplasm is_active_inIBAFB:FBgn0033885 more ...150520179 GO_CentralGO_REF:0000033
PARK7Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
PARK7Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
PARK7Humancytosol located_inIDA 150520179 PMID:14662519 more ...HPAGO_REF:0000052 more ...
PARK7Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-9641096 more ...
PARK7Humancytosol located_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humancytosol located_inIMP 150520179 PMID:21785459UniProtPMID:21785459
PARK7Humanendoplasmic reticulum located_inIDA 150520179 PMID:31536960UniProtPMID:31536960
PARK7Humanendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
PARK7Humanendoplasmic reticulum located_inIEAUniProtKB-SubCell:SL-0095150520179 UniProtGO_REF:0000044
PARK7Humanendoplasmic reticulum located_inIEAUniProtKB:Q99LX0 and ensembl:ENSMUSP00000101299150520179 EnsemblGO_REF:0000107
PARK7Humanextracellular exosome located_inHDA 150520179 PMID:19056867 more ...UniProtPMID:19056867 more ...
PARK7Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
PARK7Humanmembrane raft located_inIEAUniProtKB-SubCell:SL-0370150520179 UniProtGO_REF:0000044
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Molecular Function
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Original Reference(s)
PARK7Humancadherin binding enablesHDA 150520179 PMID:25468996BHF-UCLPMID:25468996
PARK7Humancopper ion binding enablesIDA 150520179 PMID:23792957UniProtPMID:23792957
PARK7Humancore promoter sequence-specific DNA binding NOT|enablesICGO:0003713150520179 PMID:15790595ParkinsonsUK-UCLPMID:15790595
PARK7Humancupric ion binding enablesIDA 150520179 PMID:24567322ParkinsonsUK-UCLPMID:24567322
PARK7Humancuprous ion binding enablesIDA 150520179 PMID:24144264 and PMID:24567322ParkinsonsUK-UCLPMID:24144264 and PMID:24567322
PARK7Humancytokine binding enablesIPIUniProtKB:Q9QZM3150520179 PMID:21097510ParkinsonsUK-UCLPMID:21097510
PARK7HumanDNA-binding transcription factor binding enablesIPIUniProtKB:P23246150520179 PMID:15790595 and PMID:16731528ParkinsonsUK-UCLPMID:15790595 and PMID:16731528
PARK7Humandouble-stranded DNA binding NOT|enablesIDA 150520179 PMID:22683601ParkinsonsUK-UCLPMID:22683601
PARK7Humanenzyme activator activity enablesIDA 150520179 PMID:23743200ParkinsonsUK-UCLPMID:23743200
PARK7Humanenzyme binding enablesIPIUniProtKB:P32322150520179 PMID:23743200ParkinsonsUK-UCLPMID:23743200
PARK7Humanenzyme binding enablesIPIUniProtKB:O75489 and UniProtKB:P03886150520179 PMID:19822128ParkinsonsUK-UCLPMID:19822128
PARK7Humanenzyme binding enablesIPIUniProtKB:P07101 and UniProtKB:P20711150520179 PMID:19703902ParkinsonsUK-UCLPMID:19703902
PARK7Humanglyoxalase (glycolic acid-forming) activity enablesIDA 150520179 PMID:31653696UniProtPMID:31653696
PARK7Humanhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
PARK7Humanidentical protein binding enablesIPIUniProtKB:Q99497150520179 PMID:15502874 more ...ParkinsonsUK-UCLPMID:15502874 more ...
PARK7Humankinase binding enablesIPIUniProtKB:Q9BXM7150520179 PMID:19229105UniProtPMID:19229105
PARK7HumanL-dopa decarboxylase activator activity enablesIDA 150520179 PMID:19703902ParkinsonsUK-UCLPMID:19703902
PARK7Humanmercury ion binding enablesIDA 150520179 PMID:23792957UniProtPMID:23792957
PARK7HumanmRNA binding enablesIDA 150520179 PMID:18626009UniProtPMID:18626009
PARK7Humannuclear androgen receptor binding enablesIPIUniProtKB:P10275150520179 PMID:17510388ParkinsonsUK-UCLPMID:17510388
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RGD Manual Annotations


  
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PARK7HumanParkinson's disease pathway   TAS 10450523 RGD 
PARK7Humantransforming growth factor-beta signaling pathway  ISOPark7 (Rattus norvegicus)151347449 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
PARK7HumanParkinson's disease pathway   IEA 6907045 KEGGhsa:05012
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Original Reference(s)
PARK7HumanAbnormal autonomic nervous system physiology  IAGP 8699517 HPOORPHA:2828
PARK7HumanAdult onset  IAGP 8699517 HPOMIM:606324
PARK7HumanAgitation  IAGP 8699517 HPOORPHA:2828
PARK7HumanAnxiety  IAGP 8699517 HPOORPHA:2828
PARK7HumanAnxiety  IAGP 8699517 HPOMIM:606324
PARK7HumanApathy  IAGP 8699517 HPOORPHA:2828
PARK7HumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:606324
PARK7HumanBlepharospasm  IAGP 8699517 HPOMIM:606324
PARK7HumanBradykinesia  IAGP 8699517 HPOMIM:606324
PARK7HumanBradykinesia  IAGP 8699517 HPOORPHA:2828
PARK7HumanBrisk reflexes  IAGP 8699517 HPOMIM:606324
PARK7HumanCognitive impairment  IAGP 8699517 HPOORPHA:2828
PARK7HumanColor vision defect  IAGP 8699517 HPOORPHA:2828
PARK7HumanConstipation  IAGP 8699517 HPOORPHA:2828
PARK7HumanDementia  IAGP 8699517 HPOORPHA:2828
PARK7HumanDepression  IAGP 8699517 HPOORPHA:2828
PARK7HumanDiarrhea  IAGP 8699517 HPOORPHA:2828
PARK7HumanDiplopia  IAGP 8699517 HPOORPHA:2828
PARK7HumanDyskinesia  IAGP 8699517 HPOMIM:606324
PARK7HumanDyskinesia  IAGP 8699517 HPOORPHA:2828
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Reference Title
Reference Citation
1. The Parkinson's disease gene DJ-1 is also a key regulator of stroke-induced damage. Aleyasin H, etal., Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18748-53. doi: 10.1073/pnas.0709379104. Epub 2007 Nov 14.
2. Neuroprotective function of DJ-1 in Parkinson's disease. Ariga H, etal., Oxid Med Cell Longev. 2013;2013:683920. doi: 10.1155/2013/683920. Epub 2013 May 16.
3. Phenotypic characterization of recessive gene knockout rat models of Parkinson's disease. Dave KD, etal., Neurobiol Dis. 2014 Oct;70:190-203. doi: 10.1016/j.nbd.2014.06.009. Epub 2014 Jun 24.
4. Up-regulation of caveolin-1 by DJ-1 attenuates rat pulmonary arterial hypertension by inhibiting TGFβ/Smad signaling pathway. Gao W, etal., Exp Cell Res. 2017 Dec 1;361(1):192-198. doi: 10.1016/j.yexcr.2017.10.019. Epub 2017 Oct 22.
5. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
6. Protection against dopaminergic neurodegeneration in Parkinson's disease-model animals by a modulator of the oxidized form of DJ-1, a wild-type of familial Parkinson's disease-linked PARK7. Inden M, etal., J Pharmacol Sci. 2011;117(3):189-203. Epub 2011 Oct 29.
7. PARK7 DJ-1 protects against degeneration of nigral dopaminergic neurons in Parkinson's disease rat model. Inden M, etal., Neurobiol Dis. 2006 Oct;24(1):144-58. Epub 2006 Jul 24.
8. L166P mutant DJ-1, causative for recessive Parkinson's disease, is degraded through the ubiquitin-proteasome system. Miller DW, etal., J Biol Chem. 2003 Sep 19;278(38):36588-95. Epub 2003 Jul 8.
9. DJ-1-binding compounds prevent oxidative stress-induced cell death and movement defect in Parkinson's disease model rats. Miyazaki S, etal., J Neurochem. 2008 Jun 1;105(6):2418-34. doi: 10.1111/j.1471-4159.2008.05327.x.
10. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
14. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
15. Rotenone-induced parkinsonism elicits behavioral impairments and differential expression of parkin, heat shock proteins and caspases in the rat. Sonia Angeline M, etal., Neuroscience. 2012 Sep 18;220:291-301. doi: 10.1016/j.neuroscience.2012.06.021. Epub 2012 Jun 16.
16. Regulation of dopamine presynaptic markers and receptors in the striatum of DJ-1 and Pink1 knockout rats. Sun J, etal., Neurosci Lett. 2013 Dec 17;557 Pt B:123-8. doi: 10.1016/j.neulet.2013.10.034. Epub 2013 Oct 22.
17. DJ-1 protects against neurodegeneration caused by focal cerebral ischemia and reperfusion in rats. Yanagisawa D, etal., J Cereb Blood Flow Metab. 2008 Mar;28(3):563-78. doi: 10.1038/sj.jcbfm.9600553. Epub 2007 Sep 19.
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1 to 10 of 47 rows
PMID:9070310   PMID:11223268   PMID:11462174   PMID:11477070   PMID:12446870   PMID:12477932   PMID:12526767   PMID:12548343   PMID:12612053   PMID:12761214   PMID:12796482   PMID:12815653  
PMID:12855764   PMID:12914946   PMID:12939276   PMID:12953260   PMID:14557580   PMID:14579415   PMID:14598065   PMID:14607841   PMID:14625045   PMID:14638971   PMID:14652021   PMID:14662519  
PMID:14665635   PMID:14702039   PMID:14705119   PMID:14705128   PMID:14712351   PMID:14713311   PMID:14718574   PMID:14744259   PMID:14749723   PMID:14752510   PMID:14872018   PMID:14985393  
PMID:15018843   PMID:15108293   PMID:15181200   PMID:15219840   PMID:15254937   PMID:15304593   PMID:15308309   PMID:15342556   PMID:15365989   PMID:15372597   PMID:15489334   PMID:15502874  
PMID:15503154   PMID:15525661   PMID:15542239   PMID:15592455   PMID:15703819   PMID:15717024   PMID:15766664   PMID:15790595   PMID:15894486   PMID:15935068   PMID:15944198   PMID:15970950  
PMID:15976810   PMID:15983381   PMID:16157901   PMID:16227205   PMID:16240358   PMID:16316629   PMID:16331561   PMID:16390825   PMID:16403519   PMID:16517609   PMID:16570276   PMID:16632486  
PMID:16707095   PMID:16710414   PMID:16731528   PMID:16781058   PMID:17015834   PMID:17017532   PMID:17034344   PMID:17085780   PMID:17120294   PMID:17207965   PMID:17331951   PMID:17451229  
PMID:17487420   PMID:17504761   PMID:17510388   PMID:17540176   PMID:17599367   PMID:17671684   PMID:17846173   PMID:17949781   PMID:18000879   PMID:18029348   PMID:18042550   PMID:18045143  
PMID:18162323   PMID:18181649   PMID:18331584   PMID:18430896   PMID:18436956   PMID:18439917   PMID:18486522   PMID:18570440   PMID:18586035   PMID:18626009   PMID:18632777   PMID:18647263  
PMID:18689799   PMID:18704525   PMID:18706098   PMID:18707128   PMID:18711745   PMID:18717316   PMID:18722352   PMID:18722801   PMID:18785233   PMID:18817430   PMID:18822273   PMID:18841573  
1 to 10 of 47 rows



PARK7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3817,961,711 - 7,985,505 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl17,954,291 - 7,985,505 (+)EnsemblGRCh38hg38GRCh38
GRCh3718,021,771 - 8,045,565 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3617,944,380 - 7,967,926 (+)NCBINCBI36Build 36hg18NCBI36
Build 3417,956,058 - 7,979,602NCBI
Celera17,128,771 - 7,152,398 (+)NCBICelera
Cytogenetic Map1p36.23NCBI
HuRef17,169,316 - 7,193,163 (+)NCBIHuRef
CHM1_118,009,469 - 8,033,097 (+)NCBICHM1_1
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBIT2T-CHM13v2.0
Park7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394150,981,590 - 150,994,378 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4150,981,590 - 150,998,894 (-)EnsemblGRCm39 Ensembl
GRCm384150,897,133 - 150,909,921 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4150,897,133 - 150,914,437 (-)EnsemblGRCm38mm10GRCm38
MGSCv374150,271,242 - 150,284,030 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364149,740,942 - 149,753,650 (-)NCBIMGSCv36mm8
Celera4153,174,297 - 153,187,100 (-)NCBICelera
Cytogenetic Map4E2NCBI
cM Map481.52NCBI
Park7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85166,636,551 - 166,659,825 (-)NCBIGRCr8
mRatBN7.25161,353,718 - 161,376,993 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5161,353,719 - 161,376,970 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5164,071,138 - 164,094,398 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05165,887,564 - 165,910,960 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05165,849,775 - 165,873,035 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05167,982,438 - 168,004,724 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5167,982,439 - 168,004,724 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05171,559,202 - 171,582,476 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45168,050,149 - 168,061,616 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15168,060,336 - 168,071,804 (-)NCBI
Celera5159,607,648 - 159,630,713 (-)NCBICelera
Cytogenetic Map5q36NCBI
Park7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554864,969,497 - 4,985,885 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554864,974,130 - 4,985,927 (-)NCBIChiLan1.0ChiLan1.0
PARK7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21220,243,225 - 220,268,293 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11218,884,515 - 218,908,146 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v016,722,260 - 6,745,915 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.117,969,265 - 7,993,271 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl17,969,280 - 7,993,271 (+)Ensemblpanpan1.1panPan2
PARK7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1561,576,219 - 61,592,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl561,576,069 - 61,592,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha561,584,413 - 61,601,125 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0561,791,984 - 61,808,701 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl561,792,439 - 61,808,700 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1561,791,244 - 61,807,961 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0561,656,017 - 61,672,730 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0562,059,399 - 62,076,120 (+)NCBIUU_Cfam_GSD_1.0
Park7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505831,937,508 - 31,951,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366232,422,833 - 2,436,817 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366232,422,780 - 2,436,817 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PARK7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl668,629,214 - 68,645,516 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1668,629,327 - 68,645,147 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2663,023,779 - 63,033,855 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PARK7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120123,776,084 - 123,808,031 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20123,776,297 - 123,798,434 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605427,810,002 - 27,834,129 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Park7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248183,900,917 - 3,911,042 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248183,900,917 - 3,915,457 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in PARK7
140 total Variants

Predicted Target Of
Summary Value
Count of predictions:991
Count of miRNA genes:459
Interacting mature miRNAs:490
Transcripts:ENST00000338639, ENST00000377488, ENST00000377491, ENST00000377493, ENST00000460192, ENST00000465354, ENST00000469225, ENST00000493373, ENST00000493678, ENST00000497113
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 17 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597375966GWAS1472040_Hulcerative colitis QTL GWAS1472040 (human)5e-09ulcerative colitis179619137961914Human
597092435GWAS1188509_HCrohn's disease QTL GWAS1188509 (human)5e-09intestine integrity trait (VT:0010554)179621377962138Human
597376573GWAS1472647_Hinflammatory bowel disease QTL GWAS1472647 (human)1e-15inflammatory bowel disease179619137961914Human
597161567GWAS1257641_Hgut microbiome measurement QTL GWAS1257641 (human)2e-08gut microbiome measurement179697417969742Human
407061034GWAS710010_Hstroke QTL GWAS710010 (human)0.0000002stroke179827667982767Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human
597021371GWAS1117445_HCrohn's disease QTL GWAS1117445 (human)0.000003intestine integrity trait (VT:0010554)179621377962138Human
597021498GWAS1117572_Hulcerative colitis QTL GWAS1117572 (human)4e-09ulcerative colitis179621377962138Human

1 to 10 of 17 rows
SHGC-74169  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3718,045,159 - 8,045,283UniSTSGRCh37
GRCh371249,989,841 - 49,989,970UniSTSGRCh37
Build 3617,967,746 - 7,967,870RGDNCBI36
Celera17,152,215 - 7,152,339RGD
Celera1248,784,301 - 48,784,430UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map1p36.23UniSTS
HuRef1247,020,693 - 47,020,822UniSTS
HuRef17,192,980 - 7,193,104UniSTS
GeneMap99-GB4 RH Map132.73UniSTS
Whitehead-RH Map124.9UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 19 of 19 rows
RefSeq Transcripts NG_008271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001123377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005263424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB045294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB073864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF021819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK091679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK130886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL034417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY648999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP248330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D61380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU794641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 19 of 19 rows

Ensembl Acc Id: ENST00000338639   ⟹   ENSP00000340278
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,711 - 7,985,505 (+)Ensembl
Ensembl Acc Id: ENST00000377488   ⟹   ENSP00000366708
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,969 - 7,985,111 (+)Ensembl
Ensembl Acc Id: ENST00000377491   ⟹   ENSP00000366711
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,894 - 7,985,250 (+)Ensembl
Ensembl Acc Id: ENST00000377493   ⟹   ENSP00000466242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,701 - 7,985,281 (+)Ensembl
Ensembl Acc Id: ENST00000460192
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,663 - 7,971,048 (+)Ensembl
Ensembl Acc Id: ENST00000465354
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,748 - 7,971,521 (+)Ensembl
Ensembl Acc Id: ENST00000469225   ⟹   ENSP00000466756
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,965,351 - 7,985,282 (+)Ensembl
Ensembl Acc Id: ENST00000493373   ⟹   ENSP00000465404
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,954,291 - 7,985,052 (+)Ensembl
Ensembl Acc Id: ENST00000493678   ⟹   ENSP00000418770
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,961,692 - 7,985,505 (+)Ensembl
Ensembl Acc Id: ENST00000497113
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl17,962,767 - 7,971,957 (+)Ensembl
RefSeq Acc Id: NM_001123377   ⟹   NP_001116849
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3817,961,711 - 7,985,505 (+)NCBI
GRCh3718,021,714 - 8,045,342 (+)NCBI
HuRef17,169,316 - 7,193,163 (+)ENTREZGENE
CHM1_118,009,469 - 8,033,097 (+)NCBI
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBI
Sequence:
RefSeq Acc Id: NM_007262   ⟹   NP_009193
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3817,961,711 - 7,985,505 (+)NCBI
GRCh3718,021,714 - 8,045,342 (+)ENTREZGENE
GRCh3718,021,714 - 8,045,342 (+)NCBI
Build 3617,944,380 - 7,967,926 (+)NCBI Archive
HuRef17,169,316 - 7,193,163 (+)ENTREZGENE
CHM1_118,009,469 - 8,033,097 (+)NCBI
T2T-CHM13v2.017,492,675 - 7,516,444 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005263424   ⟹   XP_005263481
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3817,961,711 - 7,985,505 (+)NCBI
GRCh3718,021,714 - 8,045,342 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054334046   ⟹   XP_054190021
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.017,492,680 - 7,516,444 (+)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_009193   ⟸   NM_007262
- UniProtKB: Q99497 (UniProtKB/Swiss-Prot),   Q7LFU2 (UniProtKB/Swiss-Prot),   Q6DR95 (UniProtKB/Swiss-Prot),   B2R4Z1 (UniProtKB/Swiss-Prot),   O14805 (UniProtKB/Swiss-Prot),   V9HWC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001116849   ⟸   NM_001123377
- UniProtKB: Q99497 (UniProtKB/Swiss-Prot),   Q7LFU2 (UniProtKB/Swiss-Prot),   Q6DR95 (UniProtKB/Swiss-Prot),   O14805 (UniProtKB/Swiss-Prot),   B2R4Z1 (UniProtKB/Swiss-Prot),   V9HWC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005263481   ⟸   XM_005263424
- Peptide Label: isoform X1
- UniProtKB: Q99497 (UniProtKB/Swiss-Prot),   Q7LFU2 (UniProtKB/Swiss-Prot),   Q6DR95 (UniProtKB/Swiss-Prot),   O14805 (UniProtKB/Swiss-Prot),   B2R4Z1 (UniProtKB/Swiss-Prot),   V9HWC2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000418770   ⟸   ENST00000493678
Ensembl Acc Id: ENSP00000465404   ⟸   ENST00000493373
DJ-1/PfpI

Name Modeler Protein Id AA Range Protein Structure
AF-Q99497-F1-model_v2 AlphaFold Q99497 1-189 view protein structure

RGD ID:6786189
Promoter ID:HG_KWN:501
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000003580
Position:
Human AssemblyChrPosition (strand)Source
Build 3617,936,566 - 7,937,066 (+)MPROMDB
RGD ID:6786222
Promoter ID:HG_KWN:502
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000377488,   ENST00000377491,   NM_007262,   OTTHUMT00000003577,   OTTHUMT00000003583,   UC001AOV.2,   UC001AOW.2
Position:
Human AssemblyChrPosition (strand)Source
Build 3617,943,919 - 7,944,419 (+)MPROMDB
RGD ID:6851138
Promoter ID:EP73366
Type:initiation region
Name:HS_PARK7
Description:Parkinson disease (autosomal recessive, early onset) 7.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 3617,944,348 - 7,944,408EPD
RGD ID:6853972
Promoter ID:EPDNEW_H151
Type:initiation region
Name:PARK7_2
Description:Parkinsonism associated deglycase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H152  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3817,954,198 - 7,954,258EPDNEW
RGD ID:6853974
Promoter ID:EPDNEW_H152
Type:initiation region
Name:PARK7_1
Description:Parkinsonism associated deglycase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H151  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3817,961,711 - 7,961,771EPDNEW


1 to 39 of 39 rows
Database
Acc Id
Source(s)
COSMIC PARK7 COSMIC
Ensembl Genes ENSG00000116288 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000338639 ENTREZGENE
  ENST00000338639.10 UniProtKB/Swiss-Prot
  ENST00000377488.5 UniProtKB/Swiss-Prot
  ENST00000377491 ENTREZGENE
  ENST00000377491.5 UniProtKB/Swiss-Prot
  ENST00000493373.5 UniProtKB/Swiss-Prot
  ENST00000493678 ENTREZGENE
  ENST00000493678.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.880 UniProtKB/Swiss-Prot
GTEx ENSG00000116288 GTEx
HGNC ID HGNC:16369 ENTREZGENE
Human Proteome Map PARK7 Human Proteome Map
InterPro Class_I_gatase-like UniProtKB/Swiss-Prot
  DJ-1 UniProtKB/Swiss-Prot
  DJ-1/PfpI UniProtKB/Swiss-Prot
  Prot/Nucl_acid_deglycase UniProtKB/Swiss-Prot
KEGG Report hsa:11315 UniProtKB/Swiss-Prot
NCBI Gene PARK7 ENTREZGENE
OMIM 602533 OMIM
PANTHER PARKINSON DISEASE PROTEIN 7 HOMOLOG UniProtKB/Swiss-Prot
  PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED UniProtKB/Swiss-Prot
Pfam DJ-1_PfpI UniProtKB/Swiss-Prot
PharmGKB PA32946 PharmGKB
Superfamily-SCOP SSF52317 UniProtKB/Swiss-Prot
UniProt B2R4Z1 ENTREZGENE
  K7ELW0_HUMAN UniProtKB/TrEMBL
  K7EN27_HUMAN UniProtKB/TrEMBL
  O14805 ENTREZGENE
  PARK7_HUMAN UniProtKB/Swiss-Prot
  Q6DR95 ENTREZGENE
  Q7LFU2 ENTREZGENE
  Q99497 ENTREZGENE
  V9HWC2 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary B2R4Z1 UniProtKB/Swiss-Prot
  O14805 UniProtKB/Swiss-Prot
  Q6DR95 UniProtKB/Swiss-Prot
  Q7LFU2 UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-18 PARK7  Parkinsonism associated deglycase  PARK7  parkinson protein 7  Symbol and/or name change 5135510 APPROVED
2011-07-27 PARK7  parkinson protein 7  PARK7  Parkinson disease (autosomal recessive, early onset) 7  Symbol and/or name change 5135510 APPROVED